View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19175_low_62 (Length: 379)

Name: NF19175_low_62
Description: NF19175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19175_low_62
NF19175_low_62
[»] chr7 (63 HSPs)
chr7 (7-362)||(24789435-24789810)
chr7 (1-362)||(32060524-32060886)
chr7 (1-362)||(20343502-20343866)
chr7 (1-362)||(6594756-6595135)
chr7 (1-362)||(6592538-6592919)
chr7 (1-216)||(18392561-18392778)
chr7 (11-362)||(43504354-43504708)
chr7 (1-214)||(2058388-2058602)
chr7 (1-253)||(20357030-20357284)
chr7 (95-216)||(18389125-18389246)
chr7 (11-349)||(48408411-48408750)
chr7 (1-362)||(1562202-1562585)
chr7 (1-253)||(21640167-21640421)
chr7 (200-349)||(39731177-39731324)
chr7 (11-214)||(21646423-21646630)
chr7 (40-214)||(1532947-1533121)
chr7 (11-182)||(21811751-21811924)
chr7 (265-362)||(18388958-18389052)
chr7 (265-362)||(18392394-18392488)
chr7 (11-214)||(39730946-39731153)
chr7 (1-215)||(12406640-12406855)
chr7 (257-349)||(24514981-24515071)
chr7 (200-343)||(25767180-25767321)
chr7 (272-349)||(1113529-1113604)
chr7 (11-161)||(25767381-25767527)
chr7 (272-349)||(4178647-4178722)
chr7 (272-353)||(30024949-30025028)
chr7 (257-349)||(29990912-29991002)
chr7 (11-182)||(24023831-24024004)
chr7 (11-189)||(18409206-18409386)
chr7 (11-189)||(18414082-18414262)
chr7 (1-214)||(4873505-4873719)
chr7 (272-349)||(14070054-14070129)
chr7 (272-349)||(14380082-14380157)
chr7 (272-349)||(35853787-35853862)
chr7 (272-349)||(43864116-43864191)
chr7 (272-349)||(47676357-47676432)
chr7 (257-349)||(4586018-4586108)
chr7 (209-251)||(1533135-1533177)
chr7 (209-254)||(2058329-2058374)
chr7 (276-349)||(18126520-18126591)
chr7 (272-349)||(48489303-48489378)
chr7 (272-349)||(48491451-48491526)
chr7 (102-182)||(24265782-24265862)
chr7 (1-177)||(31109072-31109251)
chr7 (273-349)||(38671443-38671517)
chr7 (200-263)||(4873435-4873498)
chr7 (200-263)||(31109294-31109357)
chr7 (271-349)||(31733190-31733266)
chr7 (273-322)||(4253776-4253825)
chr7 (126-215)||(12397288-12397376)
chr7 (272-349)||(23554912-23554987)
chr7 (272-349)||(47674164-47674239)
chr7 (273-333)||(12098108-12098167)
chr7 (1-74)||(12397415-12397490)
chr7 (102-182)||(24260926-24261006)
chr7 (273-333)||(41317683-41317742)
chr7 (200-254)||(21646365-21646418)
chr7 (272-349)||(2761523-2761598)
chr7 (200-253)||(12397229-12397282)
chr7 (276-345)||(26417192-26417259)
chr7 (11-73)||(47264190-47264254)
chr7 (200-263)||(24024042-24024103)
[»] chr5 (74 HSPs)
chr5 (1-362)||(22536486-22536850)
chr5 (7-362)||(29719974-29720333)
chr5 (1-362)||(10592846-10593227)
chr5 (126-362)||(29751359-29751615)
chr5 (1-362)||(40379680-40380061)
chr5 (1-362)||(16546218-16546600)
chr5 (1-362)||(40381891-40382272)
chr5 (1-362)||(16543996-16544378)
chr5 (1-362)||(25077708-25078089)
chr5 (1-362)||(25135677-25136058)
chr5 (12-214)||(24136266-24136470)
chr5 (200-362)||(29722332-29722493)
chr5 (11-349)||(16409090-16409430)
chr5 (200-362)||(9789423-9789584)
chr5 (200-362)||(18441847-18442008)
chr5 (11-349)||(26177479-26177838)
chr5 (11-311)||(16407654-16407957)
chr5 (1-215)||(27450192-27450407)
chr5 (1-215)||(43599100-43599316)
chr5 (1-215)||(43604592-43604808)
chr5 (1-215)||(43610084-43610300)
chr5 (202-349)||(26170584-26170729)
chr5 (7-181)||(9789624-9789800)
chr5 (1-215)||(27445349-27445564)
chr5 (7-181)||(18442048-18442224)
chr5 (1-182)||(30631763-30631946)
chr5 (1-212)||(1456640-1456852)
chr5 (6-182)||(28807083-28807261)
chr5 (108-215)||(43592655-43592761)
chr5 (7-175)||(29722161-29722332)
chr5 (7-120)||(29752266-29752381)
chr5 (1-182)||(15045095-15045277)
chr5 (126-214)||(35388079-35388169)
chr5 (1-175)||(29402552-29402728)
chr5 (272-349)||(36074265-36074340)
chr5 (11-191)||(26170370-26170552)
chr5 (108-210)||(31180637-31180738)
chr5 (272-349)||(13342933-13343008)
chr5 (272-349)||(13488075-13488150)
chr5 (272-349)||(28750876-28750951)
chr5 (272-349)||(30182461-30182536)
chr5 (200-252)||(43599043-43599095)
chr5 (200-252)||(43604535-43604587)
chr5 (200-252)||(43610027-43610079)
chr5 (272-349)||(25412634-25412709)
chr5 (272-349)||(39468770-39468845)
chr5 (200-253)||(43592597-43592650)
chr5 (272-349)||(533641-533716)
chr5 (272-349)||(30683141-30683216)
chr5 (200-253)||(31180573-31180626)
chr5 (274-347)||(32636698-32636769)
chr5 (272-349)||(42428651-42428726)
chr5 (102-182)||(2785777-2785857)
chr5 (209-253)||(27445291-27445335)
chr5 (209-253)||(27450134-27450178)
chr5 (273-349)||(31182846-31182920)
chr5 (102-182)||(33768586-33768666)
chr5 (102-182)||(33791718-33791798)
chr5 (108-180)||(37561058-37561130)
chr5 (276-335)||(42426469-42426527)
chr5 (11-121)||(15465000-15465112)
chr5 (76-215)||(38219809-38219949)
chr5 (276-345)||(537901-537968)
chr5 (272-349)||(13239624-13239699)
chr5 (219-260)||(24136201-24136242)
chr5 (276-333)||(42310171-42310227)
chr5 (273-349)||(5887637-5887711)
chr5 (7-103)||(29751617-29751715)
chr5 (108-180)||(37556236-37556308)
chr5 (200-263)||(15044994-15045057)
chr5 (273-348)||(16451954-16452027)
chr5 (200-254)||(35388021-35388074)
chr5 (200-253)||(1456861-1456914)
chr5 (273-349)||(3075879-3075953)
[»] chr6 (61 HSPs)
chr6 (7-362)||(27647476-27647832)
chr6 (1-362)||(16616281-16616663)
chr6 (1-362)||(16578717-16579099)
chr6 (1-362)||(16554456-16554838)
chr6 (1-362)||(16631012-16631394)
chr6 (1-216)||(25420799-25421016)
chr6 (12-349)||(2171751-2172090)
chr6 (1-216)||(34166668-34166886)
chr6 (1-216)||(33342468-33342686)
chr6 (1-216)||(6136328-6136545)
chr6 (1-216)||(34164446-34164664)
chr6 (59-362)||(16652759-16653081)
chr6 (7-216)||(13150857-13151069)
chr6 (1-362)||(6026836-6027217)
chr6 (126-349)||(6097653-6097877)
chr6 (200-362)||(411911-412070)
chr6 (7-362)||(3072959-3073334)
chr6 (11-214)||(5674242-5674447)
chr6 (7-191)||(411694-411881)
chr6 (59-251)||(5266418-5266610)
chr6 (120-362)||(25421014-25421274)
chr6 (198-362)||(33342304-33342466)
chr6 (11-189)||(22709452-22709632)
chr6 (1-164)||(30125020-30125185)
chr6 (1-192)||(14741928-14742120)
chr6 (1-215)||(11857350-11857565)
chr6 (59-182)||(28155133-28155256)
chr6 (1-100)||(34151830-34151931)
chr6 (1-214)||(22010191-22010405)
chr6 (1-182)||(6438898-6439081)
chr6 (220-362)||(34164688-34164827)
chr6 (220-362)||(34166910-34167049)
chr6 (272-349)||(31404894-31404970)
chr6 (272-350)||(16452549-16452625)
chr6 (272-350)||(30834756-30834832)
chr6 (272-349)||(5406419-5406494)
chr6 (272-349)||(5410744-5410819)
chr6 (272-349)||(9183252-9183327)
chr6 (108-192)||(14737177-14737260)
chr6 (76-182)||(6005821-6005927)
chr6 (272-349)||(5413613-5413688)
chr6 (102-191)||(16839137-16839225)
chr6 (272-349)||(33211406-33211481)
chr6 (7-103)||(6097879-6097977)
chr6 (102-182)||(33330038-33330118)
chr6 (102-182)||(33335535-33335615)
chr6 (200-253)||(11857292-11857345)
chr6 (200-253)||(16839054-16839107)
chr6 (102-182)||(5343879-5343959)
chr6 (1-54)||(16652718-16652773)
chr6 (219-254)||(5674471-5674506)
chr6 (273-348)||(16567079-16567152)
chr6 (273-348)||(16568916-16568989)
chr6 (200-263)||(22010412-22010475)
chr6 (200-262)||(28155294-28155356)
chr6 (200-253)||(14737289-14737342)
chr6 (200-253)||(14742149-14742202)
chr6 (11-73)||(23896880-23896944)
chr6 (272-300)||(5407176-5407204)
chr6 (272-300)||(5411501-5411529)
chr6 (200-263)||(6438797-6438860)
[»] chr1 (55 HSPs)
chr1 (7-362)||(20622437-20622812)
chr1 (1-362)||(9036005-9036386)
chr1 (1-362)||(44203220-44203602)
chr1 (15-356)||(51765007-51765350)
chr1 (200-362)||(40282184-40282346)
chr1 (200-362)||(9987010-9987171)
chr1 (200-362)||(21053765-21053927)
chr1 (7-191)||(40281967-40282154)
chr1 (1-189)||(21053542-21053733)
chr1 (1-182)||(39445897-39446080)
chr1 (59-214)||(24793709-24793864)
chr1 (6-182)||(25439406-25439584)
chr1 (11-254)||(19360925-19361171)
chr1 (108-214)||(24786936-24787042)
chr1 (7-191)||(9986794-9986980)
chr1 (1-182)||(44023379-44023562)
chr1 (6-182)||(25444599-25444777)
chr1 (11-182)||(41391001-41391173)
chr1 (272-349)||(13316539-13316614)
chr1 (272-349)||(20762544-20762619)
chr1 (1-182)||(1054516-1054699)
chr1 (257-348)||(3156723-3156812)
chr1 (126-214)||(24202360-24202450)
chr1 (11-181)||(19365781-19365953)
chr1 (272-349)||(28220447-28220522)
chr1 (272-349)||(28223642-28223717)
chr1 (272-348)||(31659110-31659184)
chr1 (11-121)||(24202264-24202376)
chr1 (272-349)||(3189203-3189278)
chr1 (272-349)||(3198020-3198095)
chr1 (272-349)||(3206859-3206934)
chr1 (59-182)||(41398656-41398778)
chr1 (272-349)||(10925095-10925170)
chr1 (272-349)||(37503775-37503850)
chr1 (272-345)||(49918221-49918292)
chr1 (200-255)||(24202455-24202509)
chr1 (209-264)||(24787056-24787111)
chr1 (274-349)||(44455034-44455107)
chr1 (272-345)||(1833394-1833465)
chr1 (273-346)||(13138198-13138269)
chr1 (272-356)||(37560082-37560165)
chr1 (273-349)||(3847342-3847416)
chr1 (273-349)||(15820180-15820254)
chr1 (273-333)||(28265802-28265861)
chr1 (102-182)||(43988054-43988134)
chr1 (273-333)||(50167424-50167483)
chr1 (282-349)||(834388-834453)
chr1 (200-263)||(1054737-1054800)
chr1 (273-348)||(8551009-8551082)
chr1 (209-252)||(24793878-24793921)
chr1 (200-263)||(41390900-41390963)
chr1 (200-263)||(41398555-41398618)
chr1 (273-323)||(50169455-50169505)
chr1 (273-333)||(777103-777162)
chr1 (273-349)||(23555486-23555560)
[»] chr3 (87 HSPs)
chr3 (1-362)||(54634712-54635094)
chr3 (1-362)||(6716087-6716469)
chr3 (1-362)||(10208780-10209144)
chr3 (1-362)||(3617036-3617418)
chr3 (1-362)||(25637015-25637397)
chr3 (59-362)||(45282628-45282952)
chr3 (1-362)||(4598722-4599105)
chr3 (1-362)||(4600943-4601326)
chr3 (59-362)||(6718331-6718653)
chr3 (1-216)||(10058029-10058247)
chr3 (1-216)||(10060251-10060469)
chr3 (1-216)||(10062473-10062691)
chr3 (1-216)||(10064695-10064913)
chr3 (1-216)||(10055807-10056025)
chr3 (1-216)||(10066917-10067135)
chr3 (43-254)||(2671111-2671322)
chr3 (1-216)||(10210980-10211198)
chr3 (1-214)||(8477785-8478000)
chr3 (1-215)||(7167664-7167880)
chr3 (1-214)||(40372258-40372473)
chr3 (200-340)||(7782370-7782508)
chr3 (11-349)||(23198158-23198517)
chr3 (200-349)||(23200357-23200504)
chr3 (1-214)||(28501154-28501368)
chr3 (15-215)||(27352097-27352299)
chr3 (7-181)||(800694-800870)
chr3 (108-210)||(8738634-8738736)
chr3 (108-210)||(9090872-9090974)
chr3 (198-362)||(10056027-10056188)
chr3 (198-362)||(10067137-10067298)
chr3 (1-215)||(22172664-22172879)
chr3 (1-214)||(28503321-28503535)
chr3 (275-362)||(800973-801060)
chr3 (11-189)||(23200536-23200716)
chr3 (271-362)||(10211276-10211364)
chr3 (266-349)||(9636347-9636429)
chr3 (272-349)||(5258365-5258440)
chr3 (220-362)||(10058271-10058410)
chr3 (220-362)||(10060493-10060632)
chr3 (220-362)||(10062715-10062854)
chr3 (220-362)||(10064937-10065076)
chr3 (11-189)||(1306411-1306591)
chr3 (272-349)||(5260544-5260619)
chr3 (274-349)||(7762140-7762213)
chr3 (272-349)||(5236677-5236752)
chr3 (1-182)||(18656843-18657027)
chr3 (272-349)||(29812935-29813010)
chr3 (272-349)||(37408331-37408406)
chr3 (272-349)||(45095037-45095112)
chr3 (200-264)||(28503542-28503606)
chr3 (273-349)||(32744647-32744721)
chr3 (272-348)||(40735255-40735329)
chr3 (11-122)||(7782586-7782699)
chr3 (11-189)||(26928093-26928273)
chr3 (200-254)||(40372478-40372532)
chr3 (1-54)||(6718290-6718345)
chr3 (272-348)||(7764340-7764414)
chr3 (102-182)||(8512642-8512722)
chr3 (102-182)||(8517522-8517602)
chr3 (200-264)||(28501375-28501439)
chr3 (273-349)||(39153582-39153656)
chr3 (1-54)||(45282587-45282642)
chr3 (209-264)||(8738754-8738809)
chr3 (209-264)||(9090992-9091047)
chr3 (200-263)||(22172904-22172967)
chr3 (11-215)||(33386150-33386357)
chr3 (11-182)||(2672431-2672604)
chr3 (209-254)||(27352312-27352357)
chr3 (102-183)||(32475885-32475966)
chr3 (102-183)||(32480743-32480824)
chr3 (11-140)||(37408049-37408179)
chr3 (272-349)||(51398686-51398761)
chr3 (273-349)||(760720-760794)
chr3 (273-349)||(9581156-9581230)
chr3 (273-349)||(19684110-19684184)
chr3 (102-182)||(24968519-24968599)
chr3 (273-333)||(29196637-29196696)
chr3 (273-335)||(2075304-2075364)
chr3 (200-262)||(24968419-24968481)
chr3 (274-316)||(44331429-44331471)
chr3 (126-191)||(7782538-7782603)
chr3 (272-349)||(29810740-29810815)
chr3 (11-140)||(37726155-37726286)
chr3 (102-182)||(2676680-2676760)
chr3 (273-349)||(26386702-26386776)
chr3 (59-215)||(32143726-32143884)
chr3 (273-333)||(44700728-44700787)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-362)||(5861-6243)
[»] chr4 (59 HSPs)
chr4 (1-362)||(8392984-8393365)
chr4 (1-362)||(8395193-8395574)
chr4 (1-216)||(7122269-7122486)
chr4 (1-363)||(5137877-5138260)
chr4 (1-216)||(5135651-5135869)
chr4 (1-181)||(7124491-7124673)
chr4 (59-254)||(29761001-29761196)
chr4 (200-362)||(31495516-31495677)
chr4 (1-214)||(24742360-24742575)
chr4 (11-189)||(13992686-13992866)
chr4 (7-181)||(31495717-31495893)
chr4 (1-215)||(51520833-51521048)
chr4 (6-182)||(45347324-45347502)
chr4 (1-214)||(56141513-56141728)
chr4 (11-213)||(28467990-28468196)
chr4 (276-362)||(7122566-7122651)
chr4 (276-362)||(7124785-7124870)
chr4 (200-349)||(13992506-13992654)
chr4 (276-363)||(5135948-5136035)
chr4 (1-182)||(18856124-18856307)
chr4 (1-192)||(9223901-9224093)
chr4 (1-192)||(9228688-9228880)
chr4 (272-349)||(5429551-5429626)
chr4 (272-349)||(48142914-48142989)
chr4 (272-349)||(52082878-52082953)
chr4 (272-349)||(52093885-52093960)
chr4 (38-192)||(18712296-18712449)
chr4 (60-182)||(45356861-45356983)
chr4 (1-182)||(3814421-3814603)
chr4 (1-182)||(5733061-5733245)
chr4 (272-349)||(9927678-9927753)
chr4 (272-349)||(12739771-12739846)
chr4 (272-349)||(12747977-12748052)
chr4 (272-349)||(37740498-37740573)
chr4 (272-349)||(52095583-52095658)
chr4 (272-349)||(56178857-56178932)
chr4 (272-348)||(30000027-30000101)
chr4 (257-349)||(34570635-34570725)
chr4 (273-349)||(54200127-54200201)
chr4 (200-254)||(24742301-24742355)
chr4 (200-263)||(3814320-3814383)
chr4 (200-263)||(9228909-9228972)
chr4 (1-68)||(18860450-18860519)
chr4 (200-262)||(56141735-56141797)
chr4 (272-349)||(26175857-26175932)
chr4 (273-349)||(5871693-5871767)
chr4 (273-349)||(13009652-13009726)
chr4 (273-349)||(24968984-24969058)
chr4 (273-333)||(37229972-37230031)
chr4 (273-333)||(45687432-45687491)
chr4 (273-333)||(46147591-46147650)
chr4 (213-253)||(51520775-51520815)
chr4 (200-263)||(18712478-18712541)
chr4 (200-263)||(18856023-18856086)
chr4 (274-349)||(29254368-29254441)
chr4 (272-346)||(5370310-5370382)
chr4 (272-345)||(12745661-12745732)
chr4 (126-215)||(31985236-31985327)
chr4 (273-349)||(52467576-52467650)
[»] scaffold0491 (2 HSPs)
scaffold0491 (11-349)||(8956-9295)
scaffold0491 (11-349)||(11382-11740)
[»] chr8 (58 HSPs)
chr8 (1-362)||(3439090-3439473)
chr8 (1-362)||(15290145-15290493)
chr8 (1-362)||(15470514-15470862)
chr8 (59-362)||(25689604-25689924)
chr8 (1-362)||(42575523-42575907)
chr8 (1-214)||(36979797-36980012)
chr8 (1-264)||(33037289-33037554)
chr8 (1-214)||(4759536-4759751)
chr8 (1-214)||(30656065-30656280)
chr8 (240-362)||(2627582-2627704)
chr8 (1-215)||(18852629-18852845)
chr8 (1-215)||(18870023-18870239)
chr8 (12-214)||(1261428-1261634)
chr8 (1-214)||(7289429-7289644)
chr8 (1-182)||(10683741-10683924)
chr8 (11-181)||(2627331-2627503)
chr8 (6-216)||(6311717-6311928)
chr8 (1-182)||(39784327-39784510)
chr8 (11-189)||(26288324-26288504)
chr8 (11-189)||(26301581-26301761)
chr8 (11-189)||(26313575-26313755)
chr8 (272-349)||(17982525-17982600)
chr8 (272-349)||(31218129-31218204)
chr8 (272-349)||(30143214-30143289)
chr8 (272-349)||(34254549-34254624)
chr8 (272-349)||(43036295-43036370)
chr8 (257-349)||(33352007-33352097)
chr8 (271-349)||(1746439-1746515)
chr8 (272-349)||(12702859-12702934)
chr8 (272-349)||(15212658-15212733)
chr8 (272-349)||(42498066-42498141)
chr8 (272-349)||(44303726-44303801)
chr8 (200-264)||(1261639-1261703)
chr8 (108-216)||(10688710-10688817)
chr8 (274-349)||(4733683-4733756)
chr8 (272-347)||(19945583-19945656)
chr8 (272-335)||(19948555-19948617)
chr8 (1-192)||(25327666-25327858)
chr8 (272-349)||(4731530-4731605)
chr8 (11-120)||(31042921-31043032)
chr8 (272-356)||(34256718-34256800)
chr8 (102-182)||(35745793-35745873)
chr8 (209-264)||(18852858-18852913)
chr8 (200-262)||(7289651-7289713)
chr8 (271-349)||(27811149-27811225)
chr8 (273-349)||(10929674-10929747)
chr8 (1-34)||(25689563-25689596)
chr8 (273-349)||(3303891-3303965)
chr8 (273-349)||(6598845-6598919)
chr8 (273-349)||(6674298-6674372)
chr8 (282-349)||(10015030-10015095)
chr8 (209-264)||(18870252-18870307)
chr8 (200-263)||(25327887-25327950)
chr8 (200-263)||(39784548-39784611)
chr8 (11-161)||(7412787-7412939)
chr8 (200-254)||(10688822-10688876)
chr8 (273-333)||(5689144-5689203)
chr8 (273-333)||(40320940-40320999)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-362)||(2802-3183)
[»] chr2 (42 HSPs)
chr2 (1-362)||(12647584-12647965)
chr2 (200-362)||(6266499-6266660)
chr2 (200-349)||(4484551-4484698)
chr2 (1-214)||(9295864-9296079)
chr2 (1-214)||(14291908-14292123)
chr2 (1-214)||(11098389-11098604)
chr2 (11-348)||(32289161-32289519)
chr2 (200-349)||(30833146-30833293)
chr2 (11-189)||(25410073-25410253)
chr2 (7-181)||(6266283-6266459)
chr2 (11-189)||(3492184-3492364)
chr2 (11-189)||(30832934-30833114)
chr2 (272-349)||(4503353-4503428)
chr2 (272-349)||(36205884-36205959)
chr2 (272-349)||(45099627-45099702)
chr2 (11-191)||(4484728-4484910)
chr2 (1-120)||(32247229-32247350)
chr2 (200-253)||(9296084-9296137)
chr2 (272-349)||(36988296-36988371)
chr2 (272-349)||(39284757-39284832)
chr2 (272-349)||(2334638-2334713)
chr2 (272-349)||(5723475-5723550)
chr2 (272-349)||(38312112-38312187)
chr2 (1-177)||(39811479-39811657)
chr2 (273-349)||(11151812-11151886)
chr2 (273-349)||(42362225-42362299)
chr2 (1-74)||(44310473-44310548)
chr2 (200-263)||(39811700-39811763)
chr2 (11-215)||(40739236-40739444)
chr2 (272-346)||(6595230-6595302)
chr2 (273-349)||(11690374-11690448)
chr2 (257-349)||(17057590-17057680)
chr2 (257-349)||(17085573-17085663)
chr2 (102-182)||(19344824-19344904)
chr2 (102-182)||(19349682-19349762)
chr2 (273-333)||(33162686-33162745)
chr2 (273-349)||(36318230-36318304)
chr2 (273-333)||(36773422-36773481)
chr2 (282-349)||(723965-724030)
chr2 (257-300)||(2837112-2837155)
chr2 (273-349)||(14202628-14202702)
chr2 (273-349)||(29867742-29867816)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-362)||(3924-4308)
[»] scaffold0286 (1 HSPs)
scaffold0286 (12-343)||(21953-22286)
[»] scaffold0188 (1 HSPs)
scaffold0188 (11-254)||(17444-17690)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-182)||(760-943)
[»] scaffold0002 (1 HSPs)
scaffold0002 (272-363)||(434405-434495)
[»] scaffold1519 (2 HSPs)
scaffold1519 (272-349)||(789-864)
scaffold1519 (38-189)||(524-675)
[»] scaffold0355 (2 HSPs)
scaffold0355 (1-182)||(3339-3522)
scaffold0355 (200-253)||(3560-3613)
[»] scaffold0665 (1 HSPs)
scaffold0665 (108-192)||(8098-8181)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-192)||(34556-34748)
[»] scaffold0066 (1 HSPs)
scaffold0066 (272-349)||(20636-20711)
[»] scaffold0259 (2 HSPs)
scaffold0259 (200-264)||(1962-2026)
scaffold0259 (102-191)||(1844-1932)
[»] scaffold0197 (2 HSPs)
scaffold0197 (102-182)||(13889-13969)
scaffold0197 (102-183)||(18769-18850)
[»] scaffold0028 (2 HSPs)
scaffold0028 (200-264)||(148667-148731)
scaffold0028 (102-191)||(148549-148637)
[»] scaffold0009 (1 HSPs)
scaffold0009 (102-182)||(176555-176635)
[»] scaffold1455 (1 HSPs)
scaffold1455 (1-68)||(1711-1780)
[»] scaffold0016 (1 HSPs)
scaffold0016 (272-333)||(114462-114522)
[»] scaffold0140 (1 HSPs)
scaffold0140 (11-121)||(7924-8036)
[»] scaffold0510 (1 HSPs)
scaffold0510 (11-73)||(1096-1160)


Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-103; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 7 - 362
Target Start/End: Original strand, 24789435 - 24789810
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||| ||||| |||||||||| |||||| | |||| ||||||||  |||||||||||    
T  24789435 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagt-ttgcagggtgc 24789533  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 203  Q
     || |||||||||||| | || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24789534 caaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 24789633  T
Q  204 c-------------------gtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggag-tgggaagagagagaa 283  Q
    |                   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||     
T  24789634 cttgacacgatttggaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggagaggttggaagagagaga- 24789732  T
Q  284 acttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  24789733 -cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 24789810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 32060886 - 32060524
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  32060886 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcag 32060787  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  32060786 gggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 32060688  T
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagggga---gtgggaagagagagaaacttgggaaat 294  Q
    |||||||||||||||||||   ||||||||| ||||||  | |||||||||||||||  ||||||||| |   || |||||||||||  |||||||||||    
T  32060687 gcaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagggaagaggttggaagagagag--acttgggaaat 32060591  T
Q  295 caaagggagtaa-ctctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||  |||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  32060590 caaagg--gtaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 32060524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 20343502 - 20343866
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||  ||||| ||| |||||||||| |||||||  |||| ||||||||| ||||     
T  20343502 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgagctagg-ttgcc 20343600  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || |||||| ||||| |||||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  20343601 ggatgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtac 20343700  T
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggag--tgggaagagagagaaacttgggaaat 294  Q
    ||| |||||||||||||| |  ||||||||| ||||  |||||||||||||||||||  ||||||| | |||  | |||||||||||| ||||||| |||    
T  20343701 gcagatcgtgacacgatttcaacagaggaagactag--tataaagtgttcttgtgcagatttgaagagagagttttggaagagagagagacttggggaat 20343798  T
Q  295 caaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  20343799 caaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 20343866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 6595135 - 6594756
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||| ||  || ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  6595135 ttgagattgtcttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcag 6595036  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  6595035 gggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 6594937  T
Q  198 gcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagag 277  Q
    ||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  ||||||| |  || |||||||    
T  6594936 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagagaggttggaagag 6594838  T
Q  278 agagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6594837 agaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 6594756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 6592919 - 6592538
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  6592919 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcag 6592820  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  6592819 gggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 6592721  T
Q  198 gcaaatcgtgacacg--------------------attgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-ggga-gtgggaag 275  Q
    |||||||||||||||                    ||||   ||||||||| ||||||  | |||||||||||||||  ||||||| | || || |||||    
T  6592720 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaag 6592622  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||  |||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6592621 agagag--acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 6592538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 18392778 - 18392561
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||  |||||||||| |||||||||| |||   | |||| ||||||||||||||||    
T  18392778 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcag 18392679  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | |||    
T  18392678 ggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg 18392579  T
Q  199 caaatcgtgacacgattg 216  Q
    ||||||||||||||||||    
T  18392578 caaatcgtgacacgattg 18392561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 11 - 362
Target Start/End: Complemental strand, 43504708 - 43504354
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  || ||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| || ||||||||||| ||     
T  43504708 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaa 43504610  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcg 205  Q
    ||||| ||||||   || |||||||||||||||    |||||| |||||||||| ||| ||||||||||||||| |||||||||    | |||  |||||    
T  43504609 tcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacagatgcaccaatcg 43504510  T
Q  206 tgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagta 305  Q
    ||||||||||   |||| ||| ||||||||| ||| |||||| ||||||  |||||||  | || ||||||||||||||||||||||||||||||||| |    
T  43504509 tgacacgattttatcagtggagggctagtatttaa-gtgttcctgtgcagatttgaagaagggttggaagagagagaaacttgggaaatcaaagggagaa 43504411  T
Q  306 actctagggtttagggttctttgattagagcttctcttgggtt-gaaaacatgggaaa 362  Q
    |||||||||||||| | ||||||||||||||||||||||| || | ||||||||||||    
T  43504410 actctagggtttagag-tctttgattagagcttctcttggcttgggaaacatgggaaa 43504354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 2058602 - 2058388
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| ||||  | |||| ||||||||  ||||||    
T  2058602 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttgaggtgccgtgagctagt-ttgcag 2058504  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    |  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2058503 gacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacg 2058404  T
Q  199 caaatcgtgacacgat 214  Q
    ||||||||||||||||    
T  2058403 caaatcgtgacacgat 2058388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 20357030 - 20357284
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  | |||| ||||||||  |||||    
T  20357030 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-ttgca 20357128  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || ||||||||||| |||   ||||||| ||||||||||||||||||||||||| ||||| |||||||||   ||    
T  20357129 ggacgccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaaaccttgggtcagac 20357228  T
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||    
T  20357229 gcaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 20357284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 18389246 - 18389125
Alignment:
Q  95 gcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttg 194  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  |    
T  18389246 gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacg 18389147  T
Q  195 tacgcaaatcgtgacacgattg 216  Q
     |||||||||||||||||||||    
T  18389146 gacgcaaatcgtgacacgattg 18389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 11 - 349
Target Start/End: Original strand, 48408411 - 48408750
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||| |||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  48408411 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 48408509  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcg 205  Q
    ||||| |||||| | |  |||||||||||||||    |||||| |||||||||| ||   |||||||||||||| |||||||    ||||| |  |||||    
T  48408510 tcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtcgtaccttgtaacgtacgtaccaatcg 48408609  T
Q  206 tgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagta 305  Q
    ||||||||||   |||| ||||| ||||||| ||| |||||||||||||  |||  | | ||| || ||||||||||||||||||||||||||||||| |    
T  48408610 tgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagattttgaagagagcgg-aagagagagaaacttgggaaatcaaagggagca 48408707  T
Q  306 actctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  48408708 actctagggtttaggg-tctttgattagagtttctcttgggttg 48408750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 1562585 - 1562202
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| ||||||  |  | |    |  | ||   |    
T  1562585 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgtgtttctttttttttgttttttg 1562486  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    |||   || ||||| |||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||| |  | |||    
T  1562485 ggttttaaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgtgacggacg 1562386  T
Q  199 caaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtg--ggaaga 276  Q
    |||||||||||||||||                | ||    ||||||||| ||||||| ||  |||||||||||||  |||||||| ||| |  ||||||    
T  1562385 caaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtatttat-gtgttcttgtgcagatttgaaggagagagttggaaga 1562287  T
Q  277 gagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||| ||||||| |||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  1562286 gagagagacttggggaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 1562202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 21640421 - 21640167
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||| | |||| ||||||||  |||||    
T  21640421 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgca 21640323  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || ||||| |||||| | || |||||||||||||||   ||||||| ||| |||||||||  ||||||||||||||||| ||||||   | ||    
T  21640322 ggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacggac 21640223  T
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||||||||||||||||||||| | || ||||||||||  ||||||||||||    
T  21640222 gcaaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgc 21640167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 200 - 349
Target Start/End: Original strand, 39731177 - 39731324
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||  ||||||||||||| ||| |||||||||||||  |||  | | |||| |||||||||||||||||||||||||||||    
T  39731177 aaatcgtgacacgattttatcaatggaaggctagtatttaa-gtgttcttgtgcagattttgaagagagttggaagagagagaaacttgggaaatcaaag 39731275  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39731276 ggagtaactctagggtttaggg-tctttgattagagcttctcttgggttg 39731324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 214
Target Start/End: Complemental strand, 21646630 - 21646423
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||| ||||||||  |  ||||||||| || | ||||| |||||||||| |||||| |||||| |||||| || ||||||||||| ||     
T  21646630 cttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaa 21646532  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcg 205  Q
    ||||| |||||| | ||||||||||||||||||  | |||||| |||||||||||||||||||||| |||||||||||||||||  |||||  |||||||    
T  21646531 tcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacgtacgttcaaatcg 21646432  T
Q  206 tgacacgat 214  Q
    || ||||||    
T  21646431 tgccacgat 21646423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 40 - 214
Target Start/End: Original strand, 1532947 - 1533121
Alignment:
Q  40 atcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacg 138  Q
    ||||||| |||| ||||| |||||||||  |||| | | |||||||||||||  ||||||||||| || ||||| |||||| | || |||||||||||||    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagctagt-ttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacg 1533045  T
Q  139 atcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgat 214  Q
    || ||||||||| ||||||||||||||||||||||||||||| ||||||||||   ||| ||||||||||||||||    
T  1533046 attgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgacacgat 1533121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 21811751 - 21811924
Alignment:
Q  11 cttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcagggtgcaaatt 108  Q
    ||||||||||||||||||||||||   |  |||||||  |||||||||  |||||||||| || |  |||||| ||||| | | |||||||||||||| |    
T  21811751 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatctgagatgccgtgagcaatgtttgcagggtgcaaaat 21811850  T
Q  109 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||||||||| | || ||||||||||||||||  ||||||| || ||||||||||  ||||||||||||||||    
T  21811851 cgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtca 21811924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 18389052 - 18388958
Alignment:
Q  265 ggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||| ||||||||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  18389052 ggagttggaagagagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 18388958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 265 - 362
Target Start/End: Complemental strand, 18392488 - 18392394
Alignment:
Q  265 ggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||| ||||||||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  18392488 ggagttggaagagagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 18392394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 39730946 - 39731153
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  39730946 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 39731044  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcg 205  Q
    ||||| |||||| | |   ||||||||||||||    |||||| |||||||||| ||| ||||||||||||||| |||||||||  |||||  | |||||    
T  39731045 tcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgtaccaatcg 39731144  T
Q  206 tgacacgat 214  Q
    |||||||||    
T  39731145 tgacacgat 39731153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 12406855 - 12406640
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatg-ccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||   || || ||||||||  |||||    
T  12406855 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagt-ttgca 12406757  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
     |  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||| ||| ||||||||||         
T  12406756 agacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgtt 12406658  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||||||||||||||||||    
T  12406657 gcaaatcgtgacacgatt 12406640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 24515071 - 24514981
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||   ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  24515071 tttgaaggggagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 24514981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 343
Target Start/End: Complemental strand, 25767321 - 25767180
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatcttt-gaaggggagtgggaagagagagaaacttgggaaatcaaa 298  Q
    ||||||||||||||||   |||  ||||| ||||||| ||| |||||||||||||  ||| ||||| |||  | |||||||||||||||| |||||||||    
T  25767321 aaatcgtgacacgattttatcaatggaagactagtatttaa-gtgttcttgtgcagattttgaaggagagctg-aagagagagaaacttgagaaatcaaa 25767224  T
Q  299 gggagtaactctagggtttagggttctttgattagagcttctctt 343  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||||    
T  25767223 gggagcaactctagggtttaggg-tctttgattagagtttctctt 25767180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 1113529 - 1113604
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  1113529 gaagagagagaaacttgggaaatcaaaggaagtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 1113604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 25767527 - 25767381
Alignment:
Q  11 cttcaaatttgtggtctggaagaaggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattc 109  Q
    |||||||||||||||||||||  ||  ||||||||| || | ||||| |||||||||| |||||| |||||| |||||| || ||||||||||| || ||    
T  25767527 cttcaaatttgtggtctggaa--ag--aaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatc 25767433  T
Q  110 gtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagt 161  Q
    ||| |||||||| || |||||||||||||||  | |||||| ||||||||||    
T  25767432 gtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagt 25767381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 4178647 - 4178722
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||| ||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  4178647 gaagagagagaaacttgagaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 4178722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 353
Target Start/End: Complemental strand, 30025028 - 30024949
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaa 353  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| ||||||| |||||||||    
T  30025028 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttaggttgaaaa 30024949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 29990912 - 29991002
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| ||||  |||||||||||||||||||||||||||||    |||| |||||||||||| ||||||||||||| |||||||||||||    
T  29990912 tttgaaggtgagtttgaagagagagaaacttgggaaatcaaaggagacaactttagggtttaggg-tctttgattagag-ttctcttgggttg 29991002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 24023831 - 24024004
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccat-gagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||||| ||| |||||| ||| |||||   || ||  |||||||  |||||||  || ||     
T  24023831 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggcagagagctagt-ttgcaggacgccaaa 24023929  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||||||||    
T  24023930 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtca 24024004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 18409386 - 18409206
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||| ||||||||||  |  ||||||| | |||| ||||| |||||||||| |||| | | |||| |||||| || ||||||||||| ||     
T  18409386 cttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgagct-ggtttgcagggtgccaaa 18409288  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    || || |||||| | |  |||||||||||||||  | |||||| || ||||||| ||| ||||||||||||||| |||||||    
T  18409287 tcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttg 18409206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 18414262 - 18414082
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||| |||||||||||||  |  ||||||||| |||| ||||| |||||| ||| |||| | | |||| |||||| || |||||||| || ||     
T  18414262 cttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgagct-ggtttgcagggcgccaaa 18414164  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| |||||| | || ||||||| |||||||  | |||||| || ||||||| ||| ||||||||||||||| |||||||    
T  18414163 tcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttg 18414082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4873719 - 4873505
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttc-ggatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| |||||||||| |||||  |  ||| | || || | |||||    
T  4873719 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagata-gtttgca 4873621  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||| ||   ||||||| |||||||||||||  ||||||||||| ||| | ||||||||         
T  4873620 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtc-ttccttgggtccgtt 4873522  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  4873521 gcaaatcgtgacacgat 4873505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 14070129 - 14070054
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||| | |||| ||||||||||||| |||||||||||||    
T  14070129 gaagagagagaaacttgggaaatcaaaggaggtaactttagggctgaggg-tctttgattagag-ttctcttgggttg 14070054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 14380157 - 14380082
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||| | |||| ||||||||||||| |||||||||||||    
T  14380157 gaagagagagaaacttgggaaatcaaaggaggtaactttagggctgaggg-tctttgattagag-ttctcttgggttg 14380082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 35853787 - 35853862
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||| |||||||||||| || |||| |||||||||||| ||||||||| ||| |||||||||||||    
T  35853787 gaagagagagaaacttaggaaatcaaaggtagcaactttagggtttaggg-tctttgatttgag-ttctcttgggttg 35853862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 43864116 - 43864191
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  43864116 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 43864191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 47676432 - 47676357
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  47676432 gaagagagagaaacttgggaaatcaaaggagataactttagggttgaggg-tctttgattagag-ttctcttgggttg 47676357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 4586018 - 4586108
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| ||||  ||||||||| |||||||||||||||||||  |||||| ||||||| | || ||||||||||||| |||||||||||||    
T  4586018 tttgaaggagagttagaagagagaaaaacttgggaaatcaaaggatgtaactttagggttga-ggctctttgattagag-ttctcttgggttg 4586108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 1533135 - 1533177
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgt 251  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  1533135 cacgattgcttcagaggaaggctagtatatatagtgttcttgt 1533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 2058374 - 2058329
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    |||||||||||||||||||||||||||||||  |||||||||||||    
T  2058374 cacgattgcttcagaggaaggctagtatatattgtgttcttgtgca 2058329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 349
Target Start/End: Original strand, 18126520 - 18126591
Alignment:
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| ||||| |||||||    
T  18126520 agagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcatgggttg 18126591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 48489303 - 48489378
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||| |||||||||||||||||||||||  |||||| ||||||| | || ||||||||||||| |||||||||||||    
T  48489303 gaagatagagaaacttgggaaatcaaaggaggtaactttagggttgatgg-tctttgattagag-ttctcttgggttg 48489378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 48491451 - 48491526
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||  ||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  48491451 gaagagagagaaacttgataaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 48491526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 24265782 - 24265862
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  24265782 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 24265862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 31109072 - 31109251
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgcc-atgagctagggttgca 97  Q
    |||| |||| ||||||||||||||| |||||||  ||  ||||||||| |||||||||| |||||| ||| |||||   ||||  | ||||| | |||||    
T  31109072 ttgaaattggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtgcctgtaagctaagtttgca 31109171  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggact 177  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| || |||||||||   |||||||||||    
T  31109172 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggact 31109251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 38671517 - 38671443
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  38671517 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 38671443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 4873498 - 4873435
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||||||||| ||||||||||  |||||||||||| | |||||||    
T  4873498 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 4873435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 31109294 - 31109357
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||||||||| ||||||||||  |||||||||||| | |||||||    
T  31109294 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 31109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 31733266 - 31733190
Alignment:
Q  271 ggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||| ||||||||| |  |||||| ||| ||| |||| ||||||||||||| |||||||||||||    
T  31733266 ggaagagagagaaacttgagaaatcaaaagaggtaactttagagttgaggg-tctttgattagag-ttctcttgggttg 31733190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 4253825 - 4253776
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggt 322  Q
    ||||||||||||||||||||||||||||  |||||| ||||||| |||||    
T  4253825 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgagggt 4253776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 12397376 - 12397288
Alignment:
Q  126 aaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatt 215  Q
    |||||||||||||||   ||||||| |||||||||||||  ||||||||||| ||| ||||||||||     ||||||||||||||||||    
T  12397376 aaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtgacacgatt 12397288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 23554912 - 23554987
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  ||||||  |||||| | || ||||||||||||| |||||||| ||||    
T  23554912 gaagagagagaaacttgggaaatcaaaggaggtaacttcagggttgaagg-tctttgattagag-ttctcttgagttg 23554987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 47674239 - 47674164
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  ||||||  | |||| | || ||||||||||||| |||||||||||||    
T  47674239 gaagagagagaaacttgggaaatcaaaggaggtaacttcaaggttgaagg-tctttgattagag-ttctcttgggttg 47674164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 12098167 - 12098108
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||| |||||||||||||||||||  |||||| ||||||| |||| |||||||||||    
T  12098167 aagagagaaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattag 12098108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12397490 - 12397415
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttc 74  Q
    |||| |||| |||||||||||||||||||||||  ||  |||||| || |||||||||| |||||||||| |||||    
T  12397490 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttc 12397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 24260926 - 24261006
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| ||||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  24260926 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 24261006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 41317742 - 41317683
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||  |||||| ||||||| |||| |||||||||||    
T  41317742 aagagagagaaactagggaaatcaaaggaggtaactttagggttgaggg-tctttgattag 41317683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 21646418 - 21646365
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||    
T  21646418 aaatcgtgacacgattttatcagaggaaggctagtat-ttaagtgttcttgtgca 21646365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 2761598 - 2761523
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||| |||||||||||||||||||  |||||| ||||||| |  | | ||||||||||| |||||||||||||    
T  2761598 gaagagagataaacttgggaaatcaaaggaggtaactttagggttga-tgatatttgattagag-ttctcttgggttg 2761523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 12397282 - 12397229
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||| ||||||| |||||||||||  ||||||||||  ||||||||||||    
T  12397282 aaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgc 12397229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 26417192 - 26417259
Alignment:
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgg 345  Q
    ||||| ||||||| |||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||    
T  26417192 agagataaacttgagaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgg 26417259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 47264254 - 47264190
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaattt 73  Q
    ||||||||||||||| |||||||  ||  ||||||||| |||||||||| |||||||||| ||||    
T  47264254 cttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattt 47264190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 24024042 - 24024103
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  24024042 aaatcgtggcacgatttcttcaggggaagactagtatata--gtgttcttgtgcttttttgaag 24024103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 187; Significance: 1e-101; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 22536850 - 22536486
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||| ||| |||||||||| |||||||  |||| ||||||||| |||||    
T  22536850 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctagg-ttgca 22536752  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||| ||||||||| |||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  22536751 gggtgcaaaatcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtac 22536652  T
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtggga--agagagagaaacttgggaaat 294  Q
     || |||||||||||||| |  ||||||||||||||  |||||||||||||||||||  ||||||| | |||| |||  ||||||||| |||||||||||    
T  22536651 acagatcgtgacacgatttcaacagaggaaggctag--tataaagtgttcttgtgcagatttgaagagagagttggaagagagagagagacttgggaaat 22536554  T
Q  295 caaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||| | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22536553 caaagggagaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 22536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 7 - 362
Target Start/End: Original strand, 29719974 - 29720333
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||| ||||| |||||||||| |||||| | |||| ||||||||  | |||||||||    
T  29719974 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtct-gcagggtgc 29720072  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca-- 200  Q
     || ||||| |||||||  || ||||||||||||||| ||| |||||| |||||||||| ||| |||||||||||||||||||||||||  | | |||      
T  29720073 caaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgcacc 29720172  T
Q  201 aatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagg 300  Q
    |||||||||||||||   |||| |||||||  |||| ||| |||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||    
T  29720173 aatcgtgacacgattttatcagtggaaggcatgtatttaa-gtgttcttgtgcaaatttgaaggagagttggaagagagagaaacttgggaaatcaaagg 29720271  T
Q  301 gagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  29720272 gagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 29720333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 10592846 - 10593227
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| ||| ||| |||| |||| |||| ||||||    
T  10592846 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccgggtgccgtgagatagg-ttgcag 10592944  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |  ||| ||| |||||    
T  10592945 ggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtcgtttcttcggtggtacg 10593044  T
Q  199 c--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagag 277  Q
    |                    |||||||||||||||| |  ||||||||| ||||||| | |||||||||||||||  ||||||| | |||| |||||||    
T  10593045 cagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaagactagtatgt-aagtgttcttgtgcagatttgaagagagagttggaagag 10593143  T
Q  278 agagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||    
T  10593144 agagagacttgggaaatcaaaggg-ggaactctagggtttagggttctttgattagagtatctcttgggtagaaaacatgggaaa 10593227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 126 - 362
Target Start/End: Complemental strand, 29751615 - 29751359
Alignment:
Q  126 aaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatt---------- 215  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatttggaaaatcg 29751516  T
Q  216 ----------gcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagta 305  Q
              |||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||| |    
T  29751515 tgacacgattgctttagaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagagagagagacttgggaaatcaaagggagca 29751416  T
Q  306 actctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  29751415 actctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 29751359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 40379680 - 40380061
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||  |||||||||| |||||||||| |||   | |||| ||||||||||||||||    
T  40379680 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcag 40379779  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | |||    
T  40379780 ggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg 40379879  T
Q  199 caaat--------------------cgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-ggga-gtgggaaga 276  Q
    |||||                    |||||||||||||   ||||||||| ||||||  | |||||||||||||||  ||||||| | || || ||||||    
T  40379880 caaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaaga 40379978  T
Q  277 gagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||  |||||||||||||||||| | | |||||||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  40379979 gagag--acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctctcgggttgaaaacatgggaaa 40380061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 16546218 - 16546600
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||  |||||||||| |||||||||| |||   | |||| ||||||||||||||||    
T  16546218 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcag 16546317  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | |||    
T  16546318 ggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg 16546417  T
Q  199 caaatcgtgaca--------------------cgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgg---gaag 275  Q
    ||||||||||||                    ||||||   ||||||||| ||||||  ||| |||||||||||||  ||||||||  || ||   ||||    
T  16546418 caaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaaggcaagaggttggaag 16546516  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16546517 agagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 16546600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 40381891 - 40382272
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||||||||||||||||||||||||||| |||||  || ||||||||  |||||||||| |||||||||| |||   | |||| ||||||||||||||||    
T  40381891 ttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcag 40381990  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | |||    
T  40381991 ggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg 40382090  T
Q  199 caaat--------------------cgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-ggga-gtgggaaga 276  Q
    |||||                    |||||||||||||   ||||||||| ||||||  | |||||||||||||||  ||||||| | || || ||||||    
T  40382091 caaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaaga 40382189  T
Q  277 gagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||  |||||||||||||||||| | | |||||||||||||||||||||||||||||  ||||| |||||||||||||||||||    
T  40382190 gagag--acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctctcgggttgaaaacatgggaaa 40382272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 16543996 - 16544378
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||  |||||||||| |||||||||| |||   | |||  |||||||||||| |||    
T  16543996 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattggaggtgctgtgagctagggttacag 16544095  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | |||    
T  16544096 ggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacg 16544195  T
Q  199 caaatcgtgaca--------------------cgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgg---gaag 275  Q
    ||||||||||||                    ||||||   ||||||||| ||||||  ||| |||||||||||||  ||||||||  || ||   ||||    
T  16544196 caaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaaggcaagaggttggaag 16544294  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16544295 agagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 16544378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 25077708 - 25078089
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||| | |||   | |||| ||||||||||||| ||    
T  25077708 ttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagggttgtag 25077807  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||| |||||||  || ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  25077808 gggtgcaaat-cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 25077906  T
Q  198 gcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg-gag-tgggaag 275  Q
    ||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  ||||||||| ||| | |||||    
T  25077907 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagggagaggttggaag 25078005  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25078006 agagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 25078089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 25135677 - 25136058
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||| | |||   | |||| ||||||||||||| ||    
T  25135677 ttgagtttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcgattggaggtgccgtgagctagggttgtag 25135776  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||| |||||||  || ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  25135777 gggtgcaaat-cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 25135875  T
Q  198 gcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg-gag-tgggaag 275  Q
    ||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  ||||||||| ||| | |||||    
T  25135876 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagggagaggttggaag 25135974  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25135975 agagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 25136058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 12 - 214
Target Start/End: Complemental strand, 24136470 - 24136266
Alignment:
Q  12 ttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaatt 108  Q
    |||||||||||||||||||||||   |  |||||||| |||| ||||| ||||||||||||||||| |||||| ||||||||  ||||||||||| || |    
T  24136470 ttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgagctagt-ttgcagggtgccaaat 24136372  T
Q  109 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtga 208  Q
    |||| |||||| | || |||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  24136371 cgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatcgtga 24136272  T
Q  209 cacgat 214  Q
    ||||||    
T  24136271 cacgat 24136266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 200 - 362
Target Start/End: Original strand, 29722332 - 29722493
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| |||||||  |||| ||| |||||||||||||  |||||||| |||| |||| ||||||||||||||||||||||||    
T  29722332 aaatcgtgacacgattttatcagtggaaggcatgtatttaa-gtgttcttgtgcagatttgaaggagagttggaaaagagagaaacttgggaaatcaaag 29722430  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  29722431 ggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 29722493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 11 - 349
Target Start/End: Original strand, 16409090 - 16409430
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||| |||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||| | |||||| || ||||| ||||| ||     
T  16409090 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgagct-ggtttgcaaggtgccaaa 16409188  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcg 205  Q
    | ||| |||||| | |   ||||||||||||||    |||||| |||||||||| ||| ||||||||||||||| ||| |||||  |||||  | |||||    
T  16409189 ttgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacattgggacgtacgctccaatcg 16409288  T
Q  206 tgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagta 305  Q
    ||||||||||   | || |||  |||||||| | |||||||||||||||  |||  | | |||| |||||||||||||||||||||||||||||||||||    
T  16409289 tgacacgattttattagtggagagctagtat-ttaagtgttcttgtgcagattttgaagagagttggaagagagagaaacttgggaaatcaaagggagta 16409387  T
Q  306 actctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  16409388 actctagggtttagag-tctttgattagagcttctcttgggttg 16409430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 362
Target Start/End: Complemental strand, 9789584 - 9789423
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| ||| ||||||||| ||| |||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  9789584 aaatcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggagagttggaagagagagaaacttgggaaatcaaag 9789486  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggtt-gaaaacatgggaaa 362  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||    
T  9789485 ggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaa 9789423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 362
Target Start/End: Complemental strand, 18442008 - 18441847
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| ||| ||||||||| ||| |||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  18442008 aaatcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggagagttggaagagagagaaacttgggaaatcaaag 18441910  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggtt-gaaaacatgggaaa 362  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||    
T  18441909 ggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaa 18441847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 349
Target Start/End: Original strand, 26177479 - 26177838
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  || ||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| || ||||||||||| ||     
T  26177479 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaa 26177577  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca------- 200  Q
    ||||| ||||||   || |||||||||||||||    |||||| |||||||||| ||| ||||||||||||||| |||||||||  | |||||           
T  26177578 tcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgcaccaatcg 26177677  T
Q  201 --------------aatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaact 286  Q
                  |||||||||||||||   |||| ||| ||||||||| | ||||||||||| |||  |||  | | |||| ||||||||||||||||    
T  26177678 tgacacgacctggaaatcgtgacacgattttatcagtggagggctagtat-ttaagtgttcttgcgcagattttgaagagagttggaagagagagaaact 26177776  T
Q  287 tgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  26177777 tgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggttg 26177838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 311
Target Start/End: Original strand, 16407654 - 16407957
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||  |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  16407654 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 16407752  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcg 205  Q
    ||||| |||||| | |   ||||||||||||||    |||||| |||||||||| ||| |||||||||| |||| |||||||||  ||||||   |||||    
T  16407753 tcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtcgtaccttgggacgtacgctccaatcg 16407852  T
Q  206 tgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagta 305  Q
    ||||||||||   |||| ||| ||||||||| ||| || ||||||||||  |||  | | |||| ||||||||||||||||||| |||||||||||||||    
T  16407853 tgacacgattttatcagtggagggctagtatttaa-gtattcttgtgcagattttgaagagagttggaagagagagaaacttggaaaatcaaagggagta 16407951  T
Q  306 actcta 311  Q
    ||||||    
T  16407952 actcta 16407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27450407 - 27450192
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||||  |||||    
T  27450407 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-ttgca 27450309  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||| ||||||||||   ||    
T  27450308 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagac 27450210  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||||||||||||||||||    
T  27450209 gcaaatcgtgacacgatt 27450192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 43599316 - 43599100
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttc--ggatgccatgagctagggttgc 96  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| ||||||||||  ||||||||| |||||  ||  ||| ||||||||  ||||    
T  43599316 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagt-ttgc 43599218  T
Q  97 agggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    |||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||| ||||||||||   |    
T  43599217 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcaga 43599119  T
Q  197 cgcaaatcgtgacacgatt 215  Q
    |||||||||||||||||||    
T  43599118 cgcaaatcgtgacacgatt 43599100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 43604808 - 43604592
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttc--ggatgccatgagctagggttgc 96  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| ||||||||||  ||||||||| |||||  ||  ||| ||||||||  ||||    
T  43604808 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagt-ttgc 43604710  T
Q  97 agggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    |||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||| ||||||||||   |    
T  43604709 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcaga 43604611  T
Q  197 cgcaaatcgtgacacgatt 215  Q
    |||||||||||||||||||    
T  43604610 cgcaaatcgtgacacgatt 43604592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 43610300 - 43610084
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttc--ggatgccatgagctagggttgc 96  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| ||||||||||  ||||||||| |||||  ||  ||| ||||||||  ||||    
T  43610300 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagctagt-ttgc 43610202  T
Q  97 agggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    |||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||| ||||||||||   |    
T  43610201 aggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcaga 43610103  T
Q  197 cgcaaatcgtgacacgatt 215  Q
    |||||||||||||||||||    
T  43610102 cgcaaatcgtgacacgatt 43610084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 349
Target Start/End: Original strand, 26170584 - 26170729
Alignment:
Q  202 atcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaaggg 301  Q
    ||||||||||||||   |||| ||| ||||||||| ||| |||||||||||||  |||  | | |||| |||||||||||||||||||||||||||||||    
T  26170584 atcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagattttgaagagagttggaagagagagaaacttgggaaatcaaaggg 26170682  T
Q  302 agtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||    
T  26170683 agtaactctagggtttagag-tctttgattacagcttctcttgggttg 26170729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 9789800 - 9789624
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    |||||||||||||||||||||||||||  ||| ||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| || |||||||||||    
T  9789800 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgc 9789702  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtc 181  Q
     || ||||| |||||||  || |||||||||||||||    |||||| |||||||||| ||| |||||||||||||||    
T  9789701 caaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 9789624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 27445564 - 27445349
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||| ||||||  |  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||||  |||||    
T  27445564 ttgatattggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-ttgca 27445466  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||| ||||||||||   ||    
T  27445465 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagac 27445367  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||||||||||||||||||    
T  27445366 gcaaatcgtgacacgatt 27445349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 18442224 - 18442048
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttc-ggatgccatgagctagggttgcagggtgc 103  Q
    |||||||||||||||||||||||||||  ||| ||||||||| |||| ||||| |||||||||| |||||  |||||| |||||| || |||||||||||    
T  18442224 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagct-ggtttgcagggtgc 18442126  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtc 181  Q
     || ||||| |||||||  || |||||||||||||||    |||||| |||||||||| ||| |||||||||||||||    
T  18442125 caaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 18442048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 30631946 - 30631763
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||| | |||| ||||| ||  |||||    
T  30631946 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagt-ttgca 30631848  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||  || || ||||| |||||||| || |||||||||||||||   ||||||| |||||||||||||  ||||||||||||||||    
T  30631847 ggacgccaaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtca 30631763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 1456640 - 1456852
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||||  || ||    
T  1456640 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-ttaca 1456738  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||| ||||||||||| ||| ||||||||||   |     
T  1456739 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtc-taccttgggtcagat 1456837  T
Q  198 gcaaatcgtgacacg 212  Q
    |||||||||||||||    
T  1456838 gcaaatcgtgacacg 1456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 28807083 - 28807261
Alignment:
Q  6 attgtcttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcagggtgc 103  Q
    |||| |||||||||| |||||||||||||   |  |||||||  |||||||||  |||||||||| || |  |||||| ||||| | | |||||||||||    
T  28807083 attggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatctgagatgccgtgagccaagtttgcagggtgc 28807182  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||| |||||||||||| | || ||||||||||||||||  |||||||  | ||||||||||  ||||||||||||||||    
T  28807183 aaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtca 28807261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 43592761 - 43592655
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 207  Q
    |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||| ||||||||||   ||||||||||||    
T  43592761 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtg 43592663  T
Q  208 acacgatt 215  Q
    ||||||||    
T  43592662 acacgatt 43592655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 175
Target Start/End: Original strand, 29722161 - 29722332
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    |||||||||||||||||||||||||||  ||| ||||||||| |||| ||||| |||||||||| |||||| | |||  ||||||| |  |||| |||||    
T  29722161 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgagcta-gtctgcatggtgc 29722259  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaactttctcgttaagtatccttgataagga 175  Q
     || ||||| |||||||  || ||||||||||||||| ||| |||||| |||||||||| ||| |||||||||    
T  29722260 caaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 29752381 - 29752266
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    |||||||||||||||||||||||||||  ||| ||||||||| |||| ||||| |||||||||| |||||| | |||| ||||||| |||||||||||||    
T  29752381 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgagcta-ggttgcagggtgc 29752283  T
Q  104 aaattcgtggcacgatt 120  Q
     || |||||||||||||    
T  29752282 caaatcgtggcacgatt 29752266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 15045277 - 15045095
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| |||||||||||| || ||||||||  |  ||||||||| |||||||||| |||||||||| ||||  |||||| ||||| ||  ||||||    
T  15045277 ttgatattggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccagt-ttgcag 15045179  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    |  || || |||||||||||| | || |||||||||||||||   ||||||| ||| |||||||||  ||||||||||||||||    
T  15045178 gacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 15045095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 126 - 214
Target Start/End: Complemental strand, 35388169 - 35388079
Alignment:
Q  126 aaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacacgat 214  Q
    |||| ||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||  |||||  ||||||||||||||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgacacgat 35388079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 29402552 - 29402728
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatg-ccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||| ||| |||||   || |||||||||||  |||||    
T  29402552 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggccatgagctagt-ttgca 29402650  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataagga 175  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  |||||||||    
T  29402651 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 36074340 - 36074265
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  36074340 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 36074265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 26170370 - 26170552
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||| |||| ||||||||  || ||||||||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  26170370 cttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 26170468  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
    ||||| ||||||   || |||||||||||  ||    |||||| |||||||||| ||| ||||||||||||||| |||||||||    
T  26170469 tcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttggg 26170552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Complemental strand, 31180738 - 31180637
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 207  Q
    |||||||||||| | || |||||||||||||||   || ||||||||||||||||||  |||||||||||||||| |||||||||   ||||||||||||    
T  31180738 tcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgttaagtatcactgataaggactggtca-accttgggtcagacgcaaatcgtg 31180640  T
Q  208 aca 210  Q
    |||    
T  31180639 aca 31180637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 13342933 - 13343008
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||| ||||||||| |||||||||||||    
T  13342933 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctctgattagag-ttctcttgggttg 13343008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 13488075 - 13488150
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  13488075 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 13488150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 28750951 - 28750876
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  28750951 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 28750876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 30182461 - 30182536
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| ||||| |||||| ||||||||||||| |||||||||||||    
T  30182461 gaagagagagaaacttgggaaatcaaaggaagcaactttagggattaggg-tctttgattagag-ttctcttgggttg 30182536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 43599095 - 43599043
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtg 252  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  43599095 aaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 43604587 - 43604535
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtg 252  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  43604587 aaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 43610079 - 43610027
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtg 252  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  43610079 aaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 25412634 - 25412709
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  | |||  |||||||||||| ||||||||||||| |||||||||||||    
T  25412634 gaagagagagaaacttgggaaatcaaaggaggcaacattagggtttaggg-tctttgattagag-ttctcttgggttg 25412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 39468845 - 39468770
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||| ||||||| |||||||||||||    
T  39468845 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttcattagag-ttctcttgggttg 39468770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 43592650 - 43592597
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  43592650 aaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgc 43592597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 533641 - 533716
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||| |||||||||||||||  |||||| ||||| || ||| ||||||||||||| |||||||||||||    
T  533641 gaagagagagaaatttgggaaatcaaaggaggtaactttaggg-ttgggggtctttgattagag-ttctcttgggttg 533716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 30683216 - 30683141
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||| |||  |||| | ||||||| |||| ||||||||||||| |||||||||||||    
T  30683216 gaagagagagaaacttgggaaatcagaggaggtaattttagggttgaggg-tctttgattagag-ttctcttgggttg 30683141  T

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Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 31180626 - 31180573
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||| |||||||||||||||||||| ||||||||||  ||||||||||||    
T  31180626 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 31180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 32636698 - 32636769
Alignment:
Q  274 agagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggt 347  Q
    ||||||||||||||| |||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||    
T  32636698 agagagagaaacttgagaaatcaaaggaggtaactttagggttaaggg-tctttgattagag-ttctcttgggt 32636769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 42428726 - 42428651
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||   ||||| ||||||| | || ||||||||||||| |||||||||||||    
T  42428726 gaagagagagaaacttgggaaatcaaaggagataactttagggttgaagg-tctttgattagag-ttctcttgggttg 42428651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 2785857 - 2785777
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  2785857 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 2785777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 27445335 - 27445291
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  27445335 cacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 27445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 27450178 - 27450134
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||||||||||||||||||||||||||  ||||||||||||    
T  27450178 cacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 27450134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 31182846 - 31182920
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  31182846 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 31182920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 33768666 - 33768586
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  33768666 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33768586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 33791798 - 33791718
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  33791798 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33791718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 37561058 - 37561130
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggt 180  Q
    |||||||||||| | || ||||||||||||||||  ||||||| || ||||||||||  ||||||||||||||    
T  37561058 tcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggt 37561130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 276 - 335
Target Start/End: Complemental strand, 42426527 - 42426469
Alignment:
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagag 335  Q
    |||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||||||    
T  42426527 agagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag 42426469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 15465112 - 15465000
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||| ||||  ||  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  15465112 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 15465014  T
Q  108 tcgtggcacgattt 121  Q
    ||||| ||||||||    
T  15465013 tcgtgacacgattt 15465000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 38219949 - 38219809
Alignment:
Q  76 gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataagga 175  Q
    |||||| |||||| || ||| ||||||| || ||||| |||||| | || |||| ||||||||||  | |||||| || ||||||| ||| |||||||||    
T  38219949 gatgccgtgagct-ggtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataagga 38219851  T
Q  176 ctggtcataccttgggttgtacg--caaatcgtgacacgatt 215  Q
    |||||| ||||||| |  |||||  | |||||||||||||||    
T  38219850 ctggtcgtaccttgtgacgtacgttccaatcgtgacacgatt 38219809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 537901 - 537968
Alignment:
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgg 345  Q
    |||||||||||||| ||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||    
T  537901 agagagaaacttggaaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgg 537968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 13239624 - 13239699
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||| | ||||||||||  |||||| || |||| |||| ||||||||||||| |||||||||||||    
T  13239624 gaagagagagaaacttagaaaatcaaaggaggtaactttatggttgaggg-tctttgattagag-ttctcttgggttg 13239699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 24136242 - 24136201
Alignment:
Q  219 tcagaggaaggctagtatataaagtgttcttgtgcatctttg 260  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  24136242 tcagaggaaagctagtatataaagtgttcttgtgcatttttg 24136201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 333
Target Start/End: Complemental strand, 42310227 - 42310171
Alignment:
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||||||||||||||  |||||| ||||||||| || |||||||||||    
T  42310227 agagagaaacttgggaaatcaaaggaggtaactttagggtttatgg-tctttgattag 42310171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 5887711 - 5887637
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| |||| | ||||||||||| |||||||||||||    
T  5887711 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tatttgattagag-ttctcttgggttg 5887637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 29751715 - 29751617
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    |||||||||||||||||||||||||||  ||| ||||||||| | || ||||| |||  ||||| |||||| | |||| ||||||| |||||||||||||    
T  29751715 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgagcta-ggttgcagggtgc 29751617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 37556236 - 37556308
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggt 180  Q
    |||||||||||| | || |||| |||||||||||  ||||||| || ||||||||||  ||||||||||||||    
T  37556236 tcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggt 37556308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 15045057 - 15044994
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  15045057 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 15044994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 16451954 - 16452027
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| | || ||||||||||||| ||||||||||||    
T  16451954 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttga-ggatctttgattagag-ttctcttgggtt 16452027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 35388074 - 35388021
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||    
T  35388074 aaatcgtgacacgattttatcagaggaaggctagtat-ttaagtgttcttgtgca 35388021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 1456861 - 1456914
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||| ||||||| ||| |||||||| ||||||||||  ||||||||||||    
T  1456861 aaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgc 1456914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 3075953 - 3075879
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||| ||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  3075953 aagagagtaaaactttggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 3075879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-100; HSPs: 61)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 7 - 362
Target Start/End: Original strand, 27647476 - 27647832
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||||| ||| |||||||||| |||||||  |||| ||||||||| |||||||||||    
T  27647476 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctagg-ttgcagggtgc 27647574  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 203  Q
    ||| |||||||||||||  |  ||||||||||||||||||||||||| ||||||||||||||||||||  |||||||| |  ||||||| ||||||| ||    
T  27647575 aaaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtcgtttcttgggtggtacgcagat 27647674  T
Q  204 cgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatcaaaggga 302  Q
    ||||||||||||||   |||||||| ||||  |||||||||||||||||||  ||||||| | |||| |||||||||||| |||||||||||||||||||    
T  27647675 cgtgacacgattgcaatagaggaagactag--tataaagtgttcttgtgcagatttgaagagagagttggaagagagagagacttgggaaatcaaaggga 27647772  T
Q  303 gtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  27647773 gaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 27647832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 16616281 - 16616663
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||||||  |||| ||||||||| |||||    
T  16616281 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttgca 16616379  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  16616380 gggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtac 16616479  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttga--aggggagtgggaag 275  Q
    ||                    |||||||||||||||| |  |||||||||| |||  |||||| ||||||||||||  |||||  || ||||| |||||    
T  16616480 gcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaagggtag--tataaattgttcttgtgcagatttgaagagaggagttggaag 16616577  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
     |||||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16616578 tgagagagacttggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 16616663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 16579099 - 16578717
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||||||  |||| ||||||||| |||||    
T  16579099 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttgca 16579001  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  16579000 gggtgcaaaatcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtac 16578901  T
Q  198 gcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttga--aggggagtgggaag 275  Q
    ||| ||||||||||||||                | ||    |||||||||| |||  |||||| ||||||||||||  |||||  || ||||| |||||    
T  16578900 gcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaagggtag--tataaattgttcttgtgcagatttgaagagaggagttggaag 16578803  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
     |||||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16578802 tgagagagacttggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 16578717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 16554456 - 16554838
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| | |||||||| |||||||||| |||||||  |||| ||||||||| || ||    
T  16554456 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttaca 16554554  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  16554555 gggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtac 16554654  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg--gagtgggaag 275  Q
    ||                    |||||||||||||||| |  ||||||||||||||  |||||| ||||||||||||  ||||||| |  |||| |||||    
T  16554655 gcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaattgttcttgtgcagatttgaagagaagagttggaag 16554752  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
     |||||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16554753 tgagagagacttggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 16554838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 16631012 - 16631394
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| | |||||||| |||||||||| |||||||  |||| ||||||||| || ||    
T  16631012 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttaca 16631110  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  16631111 gggtgcaaaattgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtac 16631210  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg--gagtgggaag 275  Q
    ||                    |||||||||||||||| |  ||||||||||||||  |||||| ||||||||||||  ||||||| |  |||| |||||    
T  16631211 gcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaattgttcttgtgcagatttgaagagaagagttggaag 16631308  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
     |||||| ||||||| |||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  16631309 tgagagagacttggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 16631394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 25420799 - 25421016
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| || ||||||||| |||||||| |||||||||||| ||||||||||||||||    
T  25420799 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcggatgccgtgagctagggttgcag 25420898  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  25420899 gggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 25420997  T
Q  198 gcaaatcgtgacacgattg 216  Q
    ||||||||||||| |||||    
T  25420998 gcaaatcgtgacatgattg 25421016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 12 - 349
Target Start/End: Complemental strand, 2172090 - 2171751
Alignment:
Q  12 ttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaatt 108  Q
    |||||||||||||||||||||||  |  |||||| || | || ||||| |||||||||| |||||| |||||| |||||| || ||||||||||| || |    
T  2172090 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaat 2171992  T
Q  109 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgt 206  Q
    |||| |||||| | || ||||||||||||||| || |||||| |||||||||| |||  ||||||||| |||| ||||||| |  ||||| |  ||||||    
T  2171991 cgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtttccaagataaggacaggtcgtaccttgtgacgtacgtaccaatcgt 2171892  T
Q  207 gacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaa 306  Q
    |||||||||   |||| ||||||||||||| ||| |||||||||||||  |||||||| |||   |||||||||||||||||||||||||||||||| ||    
T  2171891 gacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagatttgaaggtgagctagaagagagagaaacttgggaaatcaaagggagcaa 2171793  T
Q  307 ctctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  2171792 ctctagggtttaggg-tctttgattagagtttctcttgggttg 2171751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 34166668 - 34166886
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  34166668 ttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 34166767  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  |||    
T  34166768 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgta 34166866  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  34166867 cgcaaatcgtgacacgattg 34166886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 33342686 - 33342468
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaag--gaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||   | ||||||||| ||||||||||||||| ||| | |||||||||||| ||||||||||||||||    
T  33342686 ttgagattgtcttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcggatgccgtgagctagggttgcag 33342587  T
Q  99 gg-tgcaaattcgtggcacgatttg-ggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||||||||||||  || ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  33342586 gggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgga 33342488  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  33342487 cgcaaatcgtgacacgattg 33342468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 6136545 - 6136328
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||| ||||| |||||||||||| ||||||||||||||||    
T  6136545 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcggatgccgtgagctagggttgcag 6136446  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg 198  Q
    ||   ||| |||||||||||||  || ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | | |    
T  6136445 gggtgaaaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggaag 6136346  T
Q  199 caaatcgtgacacgattg 216  Q
    ||||||||||||| ||||    
T  6136345 caaatcgtgacacaattg 6136328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 34164446 - 34164664
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||  ||||||||  || ||||||||| |||||| |||||||||||| | |||||||||||| |||| |||||||||||    
T  34164446 ttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcggatgccgtgagttagggttgcag 34164545  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  34164546 gggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgga 34164644  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  34164645 cgcaaatcgtgacacgattg 34164664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 59 - 362
Target Start/End: Original strand, 16652759 - 16653081
Alignment:
Q  59 atcgtgacacaatttcgga-tgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtt 157  Q
    |||||||||| |||||||  |||| ||||||||| ||| |||||||||| |||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  16652759 atcgtgacacgatttcggggtgccgtgagctagg-ttgtagggtgcaaagtcgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgtt 16652857  T
Q  158 aagtatccttgataaggactggtcataccttgggttgtacgc--------------------aaatcgtgacacgattgcttcagaggaaggctagtata 237  Q
    |||||||||||||||||||||||| |  ||||||| ||||||                    |||||||||||||||| |  ||||||||||||||  ||    
T  16652858 aagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctag--ta 16652955  T
Q  238 taaagtgttcttgtgcatctttgaaggg--gagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagag 335  Q
    |||| ||||||||||||  ||||||| |  |||| ||||| |||||| ||||||  |||||||||| | |||||||||||||||||||||||||||||||    
T  16652956 taaattgttcttgtgcagatttgaagagaagagttggaagtgagagagacttggagaatcaaaggg-gcaactctagggtttagggttctttgattagag 16653054  T
Q  336 cttctcttgggttgaaaacatgggaaa 362  Q
      |||||||||||||||||||||||||    
T  16653055 tatctcttgggttgaaaacatgggaaa 16653081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 216
Target Start/End: Original strand, 13150857 - 13151069
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcaggg-tgc 103  Q
    ||||||||||||||||||  ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| ||||||||||||| |||    
T  13150857 ttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgc 13150956  T
Q  104 aaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 202  Q
    |||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |||||||    
T  13150957 aaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaa 13151055  T
Q  203 tcgtgacacgattg 216  Q
    ||||||||||||||    
T  13151056 tcgtgacacgattg 13151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 6026836 - 6027217
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||| ||||||  || || ||||||| |||||| | ||| | ||||||||||||||    
T  6026836 ttgagattgtcttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtgcga-gagctagggttgca 6026934  T
Q  98 ggg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    ||| ||||||| |||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||| | |||||||  | |    
T  6026935 ggggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacgga 6027033  T
Q  197 cgcaaat--------------------cgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-ggga-gtgggaa 274  Q
    |||||||                    |||||||||||||   ||||||||| ||||||  | |||||||||||||||  ||||||| | || || ||||    
T  6027034 cgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaa 6027132  T
Q  275 gagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  |||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6027133 gagagag--acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 6027217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 126 - 349
Target Start/End: Complemental strand, 6097877 - 6097653
Alignment:
Q  126 aaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgtgacacgattgcttcaga 223  Q
    |||||||||||||||    |||||| |||||||||| ||| ||||||||||||||| ||||| |||  |||||||  |||||||||||||||   ||||     
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctggggacgtacgcaccaatcgtgacacgattttatcagg 6097778  T
Q  224 ggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggtt 323  Q
    ||||| ||||||| ||| |||||||||||||  |||||||| ||| | | |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6097777 ggaagactagtatttaa-gtgttcttgtgcagatttgaaggtgagagagtagagagagaaacttgggaaatcaaagggagcaactctagggtttagggtt 6097679  T
Q  324 ctttgattagagcttctcttgggttg 349  Q
    ||||||||||||  |||||| |||||    
T  6097678 ctttgattagagtatctctttggttg 6097653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 200 - 362
Target Start/End: Original strand, 411911 - 412070
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| |||||||  |||| ||| |||||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||||    
T  411911 aaatcgtgacacgattttatcagtggaaggcatgtatttaa-gtgttcttgtgcagatttgaaggg-agttggaagagagagaaacttgagaaatcaaag 412008  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  412009 ggagtaactctagggtttagag-tctttgattagagcttctcttgggttgaaaacatgggaaa 412070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 7 - 362
Target Start/End: Complemental strand, 3073334 - 3072959
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| ||  | ||||||||    
T  3073334 ttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtctacagggtgc 3073236  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--- 200  Q
     || ||||| |||||||   | |||||||||||||||    |||||| |||||||||| ||| ||||||||||||||||||||||||| || | |||       
T  3073235 caaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggatggatgcacta 3073136  T
Q  201 ------------------aatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagaga 282  Q
                      |||||||||||||||   |||| ||| ||||||||| | |||||||||||||||  |||| | | |||| |||  |||||||    
T  3073135 atcgttacacgatctggaaatcgtgacacgattttatcagtggagggctagtat-ttaagtgttcttgtgcagatttggaagagagttgga--agagaga 3073039  T
Q  283 aacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt-gaaaacatgggaaa 362  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||    
T  3073038 aacttgggaaatcaaagggagaaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaa 3072959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 5674242 - 5674447
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| | || ||||| |||||||||  |||| | |||||| |||||| || ||||||||||| ||     
T  5674242 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 5674340  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 207  Q
    ||||| ||| || | || |||||||||||||||  |||||||| |||||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  5674341 tcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatcgtg 5674440  T
Q  208 acacgat 214  Q
    |||||||    
T  5674441 acacgat 5674447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 411694 - 411881
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||| ||||| || |||||||||||||| | |||| ||||||||  | |||||||||    
T  411694 ttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgagctagtct-gcagggtgc 411792  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
     || ||||| |||||||  || ||||||||||||||| ||| |||||| |||||||||| ||| |||||||||||||||||||||||||    
T  411793 caaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggg 411881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 59 - 251
Target Start/End: Complemental strand, 5266610 - 5266418
Alignment:
Q  59 atcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtt 157  Q
    |||||||||| |||||| | |||| ||||||||  |||||||  || || |||||||||||| | || |||||||||||||||   ||||||| ||| ||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatt 5266512  T
Q  158 aagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgt 251  Q
    ||||||||||||||||||||||||||||||||    | ||||||||||||||||||||||||||||||||| |||||||||   ||||||||||    
T  5266511 aagtatccttgataaggactggtcataccttgaaacggacgcaaatcgtgacacgattgcttcagaggaagactagtatattttgtgttcttgt 5266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 120 - 362
Target Start/End: Original strand, 25421014 - 25421274
Alignment:
Q  120 ttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtga----------- 208  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | |||||||||||||               
T  25421014 ttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatgattggga 25421113  T
Q  209 ---------cacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg--ggagtgggaagagagagaaacttgggaaatcaa 297  Q
             ||||||||   ||||||||| ||||||  ||| |||||||||||||  |||||||   |  || ||||||||||||  |||||||||||||    
T  25421114 aaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagaaagaggttggaagagagaga--cttgggaaatcaa 25421210  T
Q  298 agggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25421211 aggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 25421274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 198 - 362
Target Start/End: Complemental strand, 33342466 - 33342304
Alignment:
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagggg--agtgggaagagagagaaacttgggaaatc 295  Q
    |||||||||||||||||||   ||||||||| ||||||  ||| |||||||||||||  ||||||| |   | | ||||||||||||  |||||||||||    
T  33342466 gcaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagagagaatttggaagagagaga--cttgggaaatc 33342370  T
Q  296 aaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  33342369 aaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 33342304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 22709632 - 22709452
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||| ||| |||| ||||| | |||||||| |||| | ||||||||||||| || ||||||||||| ||     
T  22709632 cttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgagct-ggtttgcagggtgccaaa 22709534  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| |||||| | || |||||||||||||||  | |||||| |||||||||| ||| ||||||||||||||| |||||||    
T  22709533 tcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttg 22709452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 30125020 - 30125185
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||| | |||| ||||||||  |||||    
T  30125020 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgca 30125118  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatc 164  Q
    ||  || || |||||||||||||| || |||||||||||||||   ||||||| |||||||||||||    
T  30125119 ggacgccaaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 14741928 - 14742120
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgc-catgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||   ||  | ||||||||  |||||    
T  14741928 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggtcgtgagctagt-ttgca 14742026  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggt 192  Q
    ||  || || |||||||||||| | ||||||||||||||||||   ||||||| |||||||||||||  ||||||||||| |||| |||||||||    
T  14742027 ggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggt 14742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 11857565 - 11857350
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttc-ggatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||| | |||||    
T  11857565 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgca 11857467  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| ||||||||||| |  ||||||||||| |||| |||||||||         
T  11857466 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtca-accttgggtccgtt 11857368  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||||||||||||||||||    
T  11857367 gcaaatcgtgacacgatt 11857350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 28155133 - 28155256
Alignment:
Q  59 atcgtgacacaatttcggatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtta 158  Q
    |||||||||| || |  |||||| ||||| | | |||||||||||||| |||||||||||| | || ||||||||||||||||  ||||||| || ||||    
T  28155133 atcgtgacacgatctgagatgccgtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggtta 28155232  T
Q  159 agtatccttgataaggactggtca 182  Q
    ||||||  ||||||||||||||||    
T  28155233 agtatctctgataaggactggtca 28155256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 34151830 - 34151931
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||  ||||||||  || ||||||||| |||||| |||||||||||| | |||||||||||| |||| |||||||||||    
T  34151830 ttgagtttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcggatgccgtgagttagggttgcag 34151929  T
Q  99 gg 100  Q
    ||    
T  34151930 gg 34151931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 22010191 - 22010405
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatg-ccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||   || || | || |||  |||||    
T  22010191 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtaagttagt-ttgca 22010289  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||| ||| ||||||||||         
T  22010290 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgtt 22010388  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  22010389 gcaaatcgtgacacgat 22010405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 6439081 - 6438898
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| |||||||||| |||||||||||||   |  |||||||| |||||||||| |||||||||| |||   | |||| ||||| | | |||| |    
T  6439081 ttgaaattggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctg 6438982  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    | |||| | |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  6438981 gatgcataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtca 6438898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 34164688 - 34164827
Alignment:
Q  220 cagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggttta 318  Q
    ||||||||| ||||||  | |||||||||||||||  ||||||| | | || | |||||||||  |||||||||||||||||| | | |||||| |||||    
T  34164688 cagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaagagagag--acttgggaaatcaaaggg-gaagctctagagttta 34164783  T
Q  319 gggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  34164784 gggttctttgattagagtacctcttgggttgaaaacatgggaaa 34164827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 34166910 - 34167049
Alignment:
Q  220 cagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggttta 318  Q
    ||||||||| ||||||  | |||||||||||||||  ||||||| | | || | |||||||||  |||||||||||||||||| | | |||||| |||||    
T  34166910 cagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaagagagag--acttgggaaatcaaaggg-gaagctctagagttta 34167005  T
Q  319 gggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  34167006 gggttctttgattagagtacctcttgggttgaaaacatgggaaa 34167049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 31404970 - 31404894
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  | |||| |||||||||||||  ||||||||||| |||||||||||||    
T  31404970 gaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtcttttgattagag-ttctcttgggttg 31404894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 16452625 - 16452549
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttga 350  Q
    ||||||||||||||||||||||||||||  || |||| ||| |||||||| ||||||||||||| ||||||||||||||    
T  16452625 gaagagagagaaacttgggaaatcaaagtaagcaactttagagtttaggg-tctttgattagag-ttctcttgggttga 16452549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 350
Target Start/End: Complemental strand, 30834832 - 30834756
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttga 350  Q
    ||||||||||||||||| ||||||||||| || |||| ||||||||| || ||||||||||||| ||||||||||||||    
T  30834832 gaagagagagaaacttgagaaatcaaaggaagcaactttagggtttatgg-tctttgattagag-ttctcttgggttga 30834756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 5406494 - 5406419
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  | |||| |||||||||||| ||||||||||||| |||||| ||||||    
T  5406494 gaagagagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagag-ttctctcgggttg 5406419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 5410819 - 5410744
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  | |||| |||||||||||| ||||||||||||| |||||| ||||||    
T  5410819 gaagagagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagag-ttctctcgggttg 5410744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 9183327 - 9183252
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| ||||| |||||||    
T  9183327 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcctgggttg 9183252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 14737177 - 14737260
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggt 192  Q
    |||||||||||| | ||||||||||||||||||   ||||||| |||||||||||||  ||||||||||| |||| |||||||||    
T  14737177 tcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggt 14737260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 76 - 182
Target Start/End: Complemental strand, 6005927 - 6005821
Alignment:
Q  76 gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataagga 175  Q
    |||||||||||| | | |||| ||  ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  |||||||||    
T  6005927 gatgccatgagccaagtttgctggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataagga 6005828  T
Q  176 ctggtca 182  Q
    |||||||    
T  6005827 ctggtca 6005821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 5413688 - 5413613
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||| |||||||||||||||||||||||  | |||| |||||||||||| ||||||||||||| |||||| ||||||    
T  5413688 gaagatagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagag-ttctctcgggttg 5413613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 191
Target Start/End: Complemental strand, 16839225 - 16839137
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  |||||||||||||||| ||||||||    
T  16839225 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttggg 16839137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 33211481 - 33211406
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||  ||| |||| ||||||||||||| |||||||||||||    
T  33211481 gaagagagagaaacttgggaaatcaaaggaggtaactttacagttgaggg-tctttgattagag-ttctcttgggttg 33211406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 6097977 - 6097879
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||| |||||||  ||| ||||| ||| |||| ||||| |||||||||| |||||| |||||| |||||| || |||||||||||    
T  6097977 ttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgc 6097879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 33330038 - 33330118
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  33330038 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33330118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 33335535 - 33335615
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  33335535 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 33335615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 11857345 - 11857292
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||| ||||||| |||||||||||| ||||||||||  ||||||||||||    
T  11857345 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 11857292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 200 - 253
Target Start/End: Complemental strand, 16839107 - 16839054
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||||||||||| |||||| | | | ||||||||||||||||||||||||    
T  16839107 aaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 16839054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 5343959 - 5343879
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| ||||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  5343959 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 5343879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16652718 - 16652773
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattt 54  Q
    |||||||||||||||||||||||||||| ||||  ||| ||||||||| |||||||    
T  16652718 ttgagattgtcttcaaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 219 - 254
Target Start/End: Original strand, 5674471 - 5674506
Alignment:
Q  219 tcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    |||||||||||||||||| |||||||||||||||||    
T  5674471 tcagaggaaggctagtatttaaagtgttcttgtgca 5674506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 16567079 - 16567152
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||  |||||||||||||||||||   ||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  16567079 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaaggg-tctttgattagag-ttctcttgggtt 16567152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 348
Target Start/End: Original strand, 16568916 - 16568989
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||  ||||||||||||||||||| | ||| | ||||||| |||| ||||||||||||| ||||||||||||    
T  16568916 aagagaggaaaacttgggaaatcaaaggaattaaatttagggttaaggg-tctttgattagag-ttctcttgggtt 16568989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 22010412 - 22010475
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| ||||||||| || ||||||||||  |||||||||||| | |||||||    
T  22010412 aaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgcttttttgaag 22010475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 28155294 - 28155356
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaa 262  Q
    |||||||||||||||| |||||| ||| | ||||||||||  |||||||||||| | ||||||    
T  28155294 aaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttgaa 28155356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 14737289 - 14737342
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  ||||||||||||    
T  14737289 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 14737342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 14742149 - 14742202
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  ||||||||||||    
T  14742149 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 14742202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 23896944 - 23896880
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaattt 73  Q
    ||||||||||||||| || ||||  || |||||||||| |||||||||| |||||||||| ||||    
T  23896944 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 23896880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 300
Target Start/End: Complemental strand, 5407204 - 5407176
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagg 300  Q
    |||||||||||||||||||||||||||||    
T  5407204 gaagagagagaaacttgggaaatcaaagg 5407176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 300
Target Start/End: Complemental strand, 5411529 - 5411501
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagg 300  Q
    |||||||||||||||||||||||||||||    
T  5411529 gaagagagagaaacttgggaaatcaaagg 5411501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 6438860 - 6438797
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaagg-ctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||||||||||| |||||| |||||| ||||||||||  |||||||||||| | |||||||    
T  6438860 aaatcgtgacacgatttcttcag-ggaaggactagtatatattgtgttcttgtgcttttttgaag 6438797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 1e-94; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 7 - 362
Target Start/End: Complemental strand, 20622812 - 20622437
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||| ||||| |||||||||| |||||| | |||| ||||||||  | |||||||||    
T  20622812 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagctagtct-gcagggtgc 20622714  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 203  Q
     || ||||| |||||||  || ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20622713 caaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtggtacgcaaat 20622614  T
Q  204 cgtg--------------------acacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaa 283  Q
    ||||                    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||      
T  20622613 cgtggcatgatttggaaaatcgtgacacaattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggggttggaagagagag-- 20622516  T
Q  284 acttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  20622515 acttgggaaatcaaatggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 20622437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 9036005 - 9036386
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||||||  |||| ||||||||| |||||    
T  9036005 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttgca 9036103  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||||||||| ||| |||| |  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  |||||||  |||    
T  9036104 gggtgcaaattcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgttac 9036203  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggag-tgggaaga 276  Q
    ||                    |||||||||||||||| |  ||||||||| ||||  |||||||||||||||||||  ||||||| |||| | | ||||    
T  9036204 gcagatcgtgacacgattgggaaaatcgtgacacgatttcaacagaggaagactag--tataaagtgttcttgtgcagatttgaagaggagtttgaaaga 9036301  T
Q  277 gagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  9036302 gagagagacttgggaaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 9036386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 44203220 - 44203602
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||   | |||| ||||||||||||||||    
T  44203220 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagctagggttgcag 44203319  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  44203320 gggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 44203418  T
Q  198 gcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg---gagtgggaa 274  Q
    ||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  |||||||||   |||| ||||    
T  44203419 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagggtgagagttggaa 44203517  T
Q  275 gagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  44203518 gagagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 44203602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 356
Target Start/End: Original strand, 51765007 - 51765350
Alignment:
Q  15 aaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgt 111  Q
    ||||||||||||||||||||  |  ||||||||| |||| ||||  |||||||||| |||||| |||||| |||||| || ||||||||||| || ||||    
T  51765007 aaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaatcgt 51765105  T
Q  112 ggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgtgac 209  Q
    | |||||| | |   ||||||||||||||    |||||| |||||||||| ||| ||||||||||||||||||||||| |  ||||| |  |||||||||    
T  51765106 gacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgtgacgtacgtaccaatcgtgac 51765205  T
Q  210 acgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactc 309  Q
    ||||||   |||| ||||||||||||| ||| |||||||||||||  |||  | |||||| ||||||| |||||||||||||||||||||||||||||||    
T  51765206 acgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttgaagggagttggaagagtgagaaacttgggaaatcaaagggagtaactc 51765304  T
Q  310 tagggtttagggttctttgattagagcttctcttgggttgaaaacat 356  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  51765305 tagggtttaggg-tctttgattagagcttctcttgggttggaaacat 51765350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 200 - 362
Target Start/End: Original strand, 40282184 - 40282346
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg-gagtgggaagagagagaaacttgggaaatcaaa 298  Q
    ||||||||||||||||   |||| |||||||  |||| ||| |||||||||||||  ||||||| | |||| ||||||||||||||||||||||||||||    
T  40282184 aaatcgtgacacgattttatcagtggaaggcatgtatttaa-gtgttcttgtgcagatttgaagagagagttggaagagagagaaacttgggaaatcaaa 40282282  T
Q  299 gggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40282283 gggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 40282346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 200 - 362
Target Start/End: Original strand, 9987010 - 9987171
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    |||||||||||| |||   |||| ||| ||||||||| ||| |||||||||||||  |||||||| |||| |||||||||| | ||||||||||||||||    
T  9987010 aaatcgtgacacaattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggtgagttggaagagagatagacttgggaaatcaaag 9987108  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  9987109 ggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 9987171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 200 - 362
Target Start/End: Original strand, 21053765 - 21053927
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg-gagtgggaagagagagaaacttgggaaatcaaa 298  Q
    ||||||||||||||||   |||| |||||||  |||| ||| |||||||||||||  ||||||| | |||| |||||||||||| |||||||||||||||    
T  21053765 aaatcgtgacacgattttatcagtggaaggcatgtatttaa-gtgttcttgtgcagatttgaagtgagagttggaagagagagagacttgggaaatcaaa 21053863  T
Q  299 gggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  21053864 gggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 21053927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 40281967 - 40282154
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||| ||||| |||||||||| |||| | | |||| ||||||||| |||||||||||    
T  40281967 ttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgagctagg-ttgcagggtgc 40282065  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
     || ||||| |||||||  || ||||||||||||||| ||| |||||| |||||||||| ||| |||||||||||||||||||||||||    
T  40282066 caaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggg 40282154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 21053542 - 21053733
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||| |||| ||||| |||||||||| |||||| | |||  ||||||| |  ||||    
T  21053542 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgagcta-gaatgca 21053640  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtg-aaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
     ||||| || ||||| |||||||  || ||||||||||||||| ||| |||||| |||||||||| ||| |||||||||||||||||||||||    
T  21053641 aggtgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttg 21053733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 39446080 - 39445897
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| ||||  |||||| ||||| | | ||||||    
T  39446080 ttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccaagtttgcag 39445981  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    |  || || |||||||||||| | || ||||| ||||||||||  ||||||| |||||||||||||  ||||||||||||||||    
T  39445980 gacgccaaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtca 39445897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 214
Target Start/End: Original strand, 24793709 - 24793864
Alignment:
Q  59 atcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtt 157  Q
    |||||||||| |||||| | |||| ||||||||  |||||||  || || |||||||||||| | || |||||||||||||||   ||||||| ||||||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 24793807  T
Q  158 aagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgat 214  Q
    ||||||||||||||||||||||||| |||||||||   |||||||||||||||||||    
T  24793808 aagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgat 24793864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 25439406 - 25439584
Alignment:
Q  6 attgtcttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcagggtgc 103  Q
    |||| ||||||||||||||||||||||||   |  |||||||| ||||||| |  |||||||||| ||||  |||||| ||||| | | ||||||| |||    
T  25439406 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgagccaagtttgcaggatgc 25439505  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||| |||||||||||| | || ||||||||||||||||  ||||||| || ||||||||||  ||||||||||||||||    
T  25439506 aaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtca 25439584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 19360925 - 19361171
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||| |||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  19360925 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 19361023  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcg 205  Q
    ||||| |||||| | || |||||||||||||||  | |||||| |||||||||| |||  ||||||||| |||| ||||||| |  |||||  | |||||    
T  19361024 tcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcg 19361123  T
Q  206 tgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    ||||||||||   |||| ||||| ||||||| | |||||||||||||||    
T  19361124 tgacacgattttatcagtggaagactagtat-ttaagtgttcttgtgca 19361171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 24786936 - 24787042
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 207  Q
    |||||||||||| | || |||||||||||||||   ||||||| ||||||||||||||||||||||||||||||| |||||||||   ||||||||||||    
T  24786936 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtg 24787035  T
Q  208 acacgat 214  Q
    |||||||    
T  24787036 acacgat 24787042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 9986794 - 9986980
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    ||||||||||||||||||||||||||||  || ||||||||| |||| ||||  ||||| |||| |||||| | |||| |||||| ||  ||||| ||||    
T  9986794 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgagct-ggtctgcagtgtgc 9986892  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
     || ||||| |||||||| || |||||||||||||||    |||||| |||||||||| ||| | |||||||||||||||||||||||    
T  9986893 caaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttggg 9986980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 44023379 - 44023562
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||   | |||| ||||| | | |||| |    
T  44023379 ttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctg 44023478  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    | |||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  44023479 gatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 44023562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 25444599 - 25444777
Alignment:
Q  6 attgtcttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcagggtgc 103  Q
    |||| ||||||||||||||||||||||||   |  |||||||| ||||||| |  |||||||||| ||||  |||||| ||||| | | ||| ||| |||    
T  25444599 attggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgatttgagatgccgtgagccaagtttgtaggatgc 25444698  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||| |||||||||||| | || ||||||||||||||||  |||||||  | ||||||||||  ||||||||||||||||    
T  25444699 aaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtca 25444777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 41391173 - 41391001
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcagggtgcaaatt 108  Q
    ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| ||||  |||||| ||||| ||  |||||||  || || |    
T  41391173 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccagt-ttgcaggacgccaaat 41391075  T
Q  109 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||||||||| | || ||||||||||| |||   ||||||| ||| |||||||||  ||||||||||||||||    
T  41391074 cgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtca 41391001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 13316614 - 13316539
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  13316614 gaagagagagaaacttgggaaatcaaaggtagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 13316539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 20762544 - 20762619
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  20762544 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 20762619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 1054516 - 1054699
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||  |||||||||| ||||||| || |||   | |||| ||||| | | ||||||    
T  1054516 ttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgattggaggtgccgtgagccaagtttgcag 1054615  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    |  || || |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  1054616 gacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtca 1054699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 257 - 348
Target Start/End: Original strand, 3156723 - 3156812
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||| |||  ||||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  3156723 tttgaaggagagctggaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggtt 3156812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 214
Target Start/End: Original strand, 24202360 - 24202450
Alignment:
Q  126 aaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgtgacacgat 214  Q
    |||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||| ||||||  | |||  ||||||||||||||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgttcaaatcgtgacacgat 24202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 19365781 - 19365953
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||| |||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  19365781 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 19365879  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtc 181  Q
    ||||| |||||| | || |||||||||||||||  | |||||| |||||||| | |||  ||||||||| ||||    
T  19365880 tcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaattttccaggataaggacaggtc 19365953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 28220522 - 28220447
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  28220522 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 28220447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 28223717 - 28223642
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  28223717 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 28223642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 31659110 - 31659184
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  31659110 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggtt 31659184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 24202264 - 24202376
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||||||||  ||  ||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| || ||||||||||| ||     
T  24202264 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaa 24202362  T
Q  108 tcgtggcacgattt 121  Q
    ||||| ||||||||    
T  24202363 tcgtgacacgattt 24202376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 3189203 - 3189278
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  3189203 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 3189278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 3198020 - 3198095
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  3198020 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 3198095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 3206859 - 3206934
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  3206859 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 3206934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 41398778 - 41398656
Alignment:
Q  59 atcgtgacacaatttcggatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtta 158  Q
    |||||||||| ||||  |||||| ||||| ||  |||||||  || || |||||||||||| | || |||||||||||||||   ||||||| ||| |||    
T  41398778 atcgtgacacgatttgagatgccgtgagccagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatta 41398680  T
Q  159 agtatccttgataaggactggtca 182  Q
    |||||| |||||||||||||||||    
T  41398679 agtatcattgataaggactggtca 41398656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 10925095 - 10925170
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||| ||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  10925095 gaagagagagaaacttggaaaatcaaaggaggtaactttagggttgaggg-tctttgattatag-ttctcttgggttg 10925170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 37503850 - 37503775
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  || ||| ||||||| |||| ||||||||||||| |||| ||||||||    
T  37503850 gaagagagagaaacttgggaaatcaaaggaggtgactttagggttgaggg-tctttgattagag-ttctattgggttg 37503775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 49918221 - 49918292
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgg 345  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| | || ||||||||||||| |||||||||    
T  49918221 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaagg-tctttgattagag-ttctcttgg 49918292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 255
Target Start/End: Original strand, 24202455 - 24202509
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcat 255  Q
    |||||||||||||||||  |||||||||||||||||| | ||||||||||||||||    
T  24202455 aaatcgtgacacgattgtatcagaggaaggctagtat-ttaagtgttcttgtgcat 24202509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 24787056 - 24787111
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||||||||||||||| ||||||||||  |||||||||||| | ||||||||    
T  24787056 cacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagg 24787111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 44455034 - 44455107
Alignment:
Q  274 agagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||| ||||||||||  |||||| ||||||| |||| ||||||||||||| || ||||||||||    
T  44455034 agagagagaaacttggtaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttttcttgggttg 44455107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 345
Target Start/End: Original strand, 1833394 - 1833465
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgg 345  Q
    |||||||||||||||||||||||||||||   ||||| || |||| |||| ||||||||||||| |||||||||    
T  1833394 gaagagagagaaacttgggaaatcaaaggagataactttaaggttgaggg-tctttgattagag-ttctcttgg 1833465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 346
Target Start/End: Complemental strand, 13138269 - 13138198
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttggg 346  Q
    |||||||| |||||||||||||||||||  |||||| ||||||| |||| ||||||||||| | ||||||||||    
T  13138269 aagagagaaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattag-ggttctcttggg 13138198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 356
Target Start/End: Complemental strand, 37560165 - 37560082
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttggg-ttgaaaacat 356  Q
    ||||||||||||||||| ||||||||| |  |||||| || |||| |||| ||||||||||||| |||||||||| ||||||||||    
T  37560165 gaagagagagaaacttgagaaatcaaatgaggtaactttaaggttgaggg-tctttgattagag-ttctcttgggtttgaaaacat 37560082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 3847416 - 3847342
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||  |||| ||||||||||||| |||||||||||||    
T  3847416 aagagaggaaaacttgggaaatcaaaggaggtaactttagggtcgaggg-tctttgattagag-ttctcttgggttg 3847342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 15820180 - 15820254
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| ||||||||||||||||| |  |||||| ||||||| |||| ||||||||||||| |||||||| ||||    
T  15820180 aagagagaaaaacttgggaaatcaaaagaggtaactttagggttgaggg-tctttgattagag-ttctcttgagttg 15820254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 28265861 - 28265802
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||  |||||| ||||||| |||| |||||||||||    
T  28265861 aagagagagaaactagggaaatcaaaggaggtaactttagggttgaggg-tctttgattag 28265802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 43988054 - 43988134
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| ||||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  43988054 gcaaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 43988134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 50167483 - 50167424
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||  |||||| ||||||| |||| |||||||||||    
T  50167483 aagagagagaaactagggaaatcaaaggaggtaactttagggttgaggg-tctttgattag 50167424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 834453 - 834388
Alignment:
Q  282 aaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  834453 aaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 834388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 1054737 - 1054800
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||||||||||| |||||| ||| | ||||||||||  |||||||||||| | |||||||    
T  1054737 aaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttgaag 1054800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 348
Target Start/End: Complemental strand, 8551082 - 8551009
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||  |||||||||||||||||||   ||||| ||||||| |||| ||||||||||||| ||||||||||||    
T  8551082 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaaggg-tctttgattagag-ttctcttgggtt 8551009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 252
Target Start/End: Original strand, 24793878 - 24793921
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtg 252  Q
    |||||||||||||||||||| ||||||||||  |||||||||||    
T  24793878 cacgattgcttcagaggaagactagtatatattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 41390963 - 41390900
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  41390963 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 41390900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 41398618 - 41398555
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  41398618 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 41398555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 323
Target Start/End: Complemental strand, 50169505 - 50169455
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggtt 323  Q
    |||||||||||||| |||||||||||||  |||||| ||||||| ||||||    
T  50169505 aagagagagaaactagggaaatcaaaggaggtaactttagggttgagggtt 50169455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 777103 - 777162
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||  |||||| ||||||| | || |||||||||||    
T  777103 aagagagagaaactagggaaatcaaaggaggtaactttagggttgatgg-tctttgattag 777162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 23555560 - 23555486
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| |||||||||||||||||||  ||||||  |||||| | || |||||||||| || |||||||||||||    
T  23555560 aagagagaaaaacttgggaaatcaaaggaggtaacttcagggttga-ggatctttgattaaag-ttctcttgggttg 23555486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 1e-91; HSPs: 87)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 54634712 - 54635094
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| || ||||||| |||||||  |||| ||||||| | |||||    
T  54634712 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaag-ttgca 54634810  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||| |||||||||||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  54634811 gggtgcaaaatcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcttttcttgggtggtac 54634910  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaaga 276  Q
    ||                    ||||||||||||||||||  ||||||||||||||  |||||||||||||||||||  ||||||| |||||| ||||||    
T  54634911 gcaaatcatgacacgattgggaaaatcgtgacacgattgcaacagaggaaggctag--tataaagtgttcttgtgcagatttgaagagggagttggaaga 54635008  T
Q  277 gagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  54635009 gagagagacttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 54635094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 6716087 - 6716469
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||| ||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||||||  |||| ||||||||| |||||    
T  6716087 ttgagattgtcttgaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgagctagg-ttgca 6716185  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||| ||||| |||||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  6716186 gggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtac 6716285  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaaga 276  Q
    ||                    |||||||||||||||| |  ||||||||| ||||  |||||||||||||||||||  |||||||   | || ||||||    
T  6716286 gcggatcgtgacacgatttggaaaatcgtgacacgatttcaacagaggaagactag--tataaagtgttcttgtgcagatttgaagaaagggttggaaga 6716383  T
Q  277 gagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6716384 gagagagacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 6716469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 10208780 - 10209144
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||| ||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  10208780 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 10208879  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| ||||||||||||| ||||||||||||||||||||  ||||||| |||||||| ||||||||||||||||||||| | |||||||  | |    
T  10208880 gggtgcaaat-cgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtcgttccttgggacgga 10208978  T
Q  197 cgcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag----gggagtgggaagagagagaaacttgggaa 292  Q
    ||||||||||||||||||||   ||||||||| ||||||  | |||||||||||||||  |||||||     |  || |||||||||||  |||||||||    
T  10208979 cgcaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagtaaaagaggttggaagagagag--acttgggaa 10209075  T
Q  293 atcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||||  | |||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  10209076 atcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaa 10209144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 3617036 - 3617418
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  3617036 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcag 3617135  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| | |||||||  | ||    
T  3617136 gggtgcaaat-cgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacggac 3617234  T
Q  198 gcaaat--------------------cgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagggga---gtgggaa 274  Q
    ||||||                    |||||||||||||   ||||||||| ||||||  | |||||||||||||||  ||||||| | |   || ||||    
T  3617235 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagtagaggttggaa 3617333  T
Q  275 gagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  |||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  3617334 gagagag--acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 3617418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 25637015 - 25637397
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    ||||||||||||| ||||||||||||||||||||  || ||||||||| |||||| ||| |||||||||| |||||| | ||| | ||||||||||||||    
T  25637015 ttgagattgtctttaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtgcga-gagctagggttgca 25637113  T
Q  98 ggg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    ||| ||||||| ||||||||||||  || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  25637114 ggggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgga 25637212  T
Q  197 cgcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggag-tgggaag 275  Q
    |||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  ||||||| |||| | |||||    
T  25637213 cgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagaggaggttggaag 25637311  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25637312 agagagagacttgggaaatcaaaggg-gtatctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 25637397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 59 - 362
Target Start/End: Original strand, 45282628 - 45282952
Alignment:
Q  59 atcgtgacacaatttcgga-tgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtt 157  Q
    |||||||||| |||||||  |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctagg-ttgcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 45282726  T
Q  158 aagtatccttgataaggactggtcataccttgggttgtacgc--------------------aaatcgtgacacgattgcttcagaggaaggctagtata 237  Q
    |||||||||||||||||||||||| |  ||||||| ||||||                    |||||||||||||||| |  ||||||||||||||  ||    
T  45282727 aagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgacacgattgggaaaatcgtgacacgatttcaacagaggaaggctag--ta 45282824  T
Q  238 taaagtgttcttgtgcatctttgaag-gggagtggga--agagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattaga 334  Q
    |||||||||||||||||  ||||||| | |||| |||  ||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  45282825 taaagtgttcttgtgcagatttgaagagagagttggaagagagagagagacttggggaatcaaagggagcaactctagggtttagggttctttgattaga 45282924  T
Q  335 gcttctcttgggttgaaaacatgggaaa 362  Q
    |  |||||||||||||||||||||||||    
T  45282925 gtatctcttgggttgaaaacatgggaaa 45282952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 4599105 - 4598722
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  4599105 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgcag 4599006  T
Q  99 gg-tgcaaattcgtggcacgatttg-ggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||||||||||||  || ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  4599005 gggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgga 4598907  T
Q  197 cgcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg---gagtggga 273  Q
    |||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  |||||| ||   |||| |||    
T  4598906 cgcaaatcgtgacacgattgggaaaatcgtgacacgattgaaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaaaggagagagttgga 4598808  T
Q  274 agagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||  ||||||||||||||||||  | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  4598807 agagagaga--cttgggaaatcaaagggaa-agctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 4598722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 4601326 - 4600943
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||    
T  4601326 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgcag 4601227  T
Q  99 gg-tgcaaattcgtggcacgatttg-ggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||||||||||||  || ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  4601226 gggtgcaaat-cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgga 4601128  T
Q  197 cgcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg---gagtggga 273  Q
    |||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  |||||| ||   |||| |||    
T  4601127 cgcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaaaggaaagagttgga 4601029  T
Q  274 agagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||  ||||||||||||||||||  | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  4601028 agagagaga--cttgggaaatcaaagggaa-agctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 4600943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 59 - 362
Target Start/End: Original strand, 6718331 - 6718653
Alignment:
Q  59 atcgtgacacaatttcgga-tgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtt 157  Q
    |||||||||| |||||||  |||| ||||||||| |||||||||||||| ||||| |||||||  || ||||||||||||||||||||||||| ||||||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctagg-ttgcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgtt 6718429  T
Q  158 aagtatccttgataaggactggtcataccttgggttgtacgc--------------------aaatcgtgacacgattgcttcagaggaaggctagtata 237  Q
    |||||||||||||||||||||||| |  ||||||| ||||||                    |||||||||||||||| |  ||||||||| ||||  ||    
T  6718430 aagtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtgacacgatttgaaaaatcgtgacacgatttcaacagaggaagactag--ta 6718527  T
Q  238 taaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagc 336  Q
    |||||||||||||||||  |||||||   | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6718528 taaagtgttcttgtgcagatttgaagaaagggttggaagagagagagacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagt 6718627  T
Q  337 ttctcttgggttgaaaacatgggaaa 362  Q
     |||||||||||||||||||||||||    
T  6718628 atctcttgggttgaaaacatgggaaa 6718653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10058029 - 10058247
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  10058029 ttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 10058128  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  |||    
T  10058129 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgta 10058227  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  10058228 cgcaaatcgtgacacgattg 10058247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10060251 - 10060469
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  10060251 ttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 10060350  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  |||    
T  10060351 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgta 10060449  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  10060450 cgcaaatcgtgacacgattg 10060469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10062473 - 10062691
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  10062473 ttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 10062572  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  |||    
T  10062573 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgta 10062671  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  10062672 cgcaaatcgtgacacgattg 10062691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10064695 - 10064913
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  10064695 ttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 10064794  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  |||    
T  10064795 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgta 10064893  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  10064894 cgcaaatcgtgacacgattg 10064913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10055807 - 10056025
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  10055807 ttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 10055906  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  10055907 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgga 10056005  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  10056006 cgcaaatcgtgacacgattg 10056025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10066917 - 10067135
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  10066917 ttgagtttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 10067016  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  10067017 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgga 10067115  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  10067116 cgcaaatcgtgacacgattg 10067135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 43 - 254
Target Start/End: Original strand, 2671111 - 2671322
Alignment:
Q  43 gtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatc 141  Q
    |||| |||||||||| |||||||||  |||||  | |||| ||||||||  ||||||| ||| || |||||||||||| | || |||||||||||||||     
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgagctagt-ttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatt 2671209  T
Q  142 gtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgattgcttcagaggaaggctagtatataaa 241  Q
      ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||      
T  2671210 tagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatttcttcagaggaagactagtatatatt 2671309  T
Q  242 gtgttcttgtgca 254  Q
    |||||||||||||    
T  2671310 gtgttcttgtgca 2671322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 10210980 - 10211198
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||| ||||||||||| ||||||||  || ||||||||| |||||||||| |||||||| | |||| ||||||| |||| |||||||||||    
T  10210980 ttgagattgtctttaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttaggatgccgtgagttagggttgcag 10211079  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| ||||||||||||| ||||||||| ||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  10211080 gggtgcaaat-cgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgga 10211178  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  10211179 cgcaaatcgtgacacgattg 10211198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 8478000 - 8477785
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  |||| |||| |||||||||| |||||||||| |||||| | |||| ||||||||  ||||     
T  8478000 ttgacattggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgct 8477902  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||| || |||||||||||| | || ||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8477901 ggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtac 8477802  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  8477801 gcaaatcgtgacacgat 8477785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 7167880 - 7167664
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||| ||||||||||  |  ||||||||| |||||||||| ||||||||||||||||  | |||| ||||||||  |||||    
T  7167880 ttgatattggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgagctagt-ttgca 7167782  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||||||||||||||||||   ||    
T  7167781 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagac 7167682  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||||||||||||||||||    
T  7167681 gcaaatcgtgacacgatt 7167664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 40372258 - 40372473
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||| | |||| ||||||||  |||||    
T  40372258 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgca 40372356  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||| ||   | ||    
T  40372357 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggac 40372456  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||| ||||||    
T  40372457 gcaaatcgtgccacgat 40372473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 200 - 340
Target Start/End: Complemental strand, 7782508 - 7782370
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| ||| ||||||||| ||| |||||||||||||  ||||||||  ||| |||||||||||||||||||||||||||||    
T  7782508 aaatcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggacagttggaagagagagaaacttgggaaatcaaag 7782410  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttct 340  Q
    |||||||||||||| ||||| | ||||||||||||||||||    
T  7782409 ggagtaactctaggttttagag-tctttgattagagcttct 7782370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 349
Target Start/End: Complemental strand, 23198517 - 23198158
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||  |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  23198517 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 23198419  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcg 205  Q
    ||||| ||||||||||   ||||||||||||||    |||||| |||||||||| |||  |||||||||||||| ||||||| |  |||||  | |||||    
T  23198418 tcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgacgtacgtaccaatcg 23198319  T
Q  206 tgacacgatt---------------gct----tcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaact 286  Q
    ||||||||||               | |    |||| ||||| ||||||| | |||||||||||||||  |||  | | |||| ||||||||||||||||    
T  23198318 tgacacgatttggaaatcgtgacacgattttatcagtggaagactagtat-ttaagtgttcttgtgcagattttgaagagagttggaagagagagaaact 23198220  T
Q  287 tgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||| ||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  23198219 tggaaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctcttgggttg 23198158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 349
Target Start/End: Complemental strand, 23200504 - 23200357
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| ||||| || |||| ||| ||||| |||||||  |||  | | |||| |||||||||||||||||||||||||||||    
T  23200504 aaatcgtgacacgattttatcagtggaagactggtatttaa-gtgtttttgtgcagattttgaagagagttggaagagagagaaacttgggaaatcaaag 23200406  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  23200405 ggagcaactctagggtttaggg-tctttgattagagtttctcttgggttg 23200357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 28501154 - 28501368
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||| |||||||||  |  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||||  |||||    
T  28501154 ttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-ttgca 28501252  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||   | || |||||||||||| | ||||||||||||||||||   ||||||| |||||||||||||| ||||||||||| |||| |||||||||   ||    
T  28501253 ggacaccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtca-accttgggtcagac 28501351  T
Q  198 gcaaatcgtgacacgat 214  Q
    ||||||| |||||||||    
T  28501352 gcaaatcatgacacgat 28501368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 15 - 215
Target Start/End: Original strand, 27352097 - 27352299
Alignment:
Q  15 aaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgt 111  Q
    ||||||||||||| ||||||  | |||||||||| |||||||||| |||||||||| |||||  | |||| |||||| |  ||||||    | || ||||    
T  27352097 aaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagcttgt-ttgcagaacaccaaatcgt 27352195  T
Q  112 ggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacac 211  Q
    |||||||| | || |||||||||||||||   ||||||| |||||||| ||||  |||||||||||||||||||||||||  | ||||||||||||||||    
T  27352196 ggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgtgacac 27352295  T
Q  212 gatt 215  Q
    ||||    
T  27352296 gatt 27352299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 800694 - 800870
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    |||||||| ||||||||||||||||||  ||| ||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| || |||| ||||||    
T  800694 ttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcggggtgc 800792  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtc 181  Q
     || ||||| |||||||  || |||||||||||||||    |||||| |||||||||| ||| ||||||||| |||||    
T  800793 caaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtc 800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 8738634 - 8738736
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 207  Q
    |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||   | ||||||||||||    
T  8738634 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtg 8738733  T
Q  208 aca 210  Q
    |||    
T  8738734 aca 8738736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 9090872 - 9090974
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 207  Q
    |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||   | ||||||||||||    
T  9090872 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtg 9090971  T
Q  208 aca 210  Q
    |||    
T  9090972 aca 9090974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 198 - 362
Target Start/End: Original strand, 10056027 - 10056188
Alignment:
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatca 296  Q
    |||||||||||||||||||   ||||||||| ||||||  | |||||||||||||||  ||||||| | | || | |||||||||  |||||||||||||    
T  10056027 gcaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaagagagag--acttgggaaatca 10056123  T
Q  297 aagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||| | | |||||| ||||||||||||||||||||||   ||||||||||||||||||||||||    
T  10056124 aaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaa 10056188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 198 - 362
Target Start/End: Original strand, 10067137 - 10067298
Alignment:
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatca 296  Q
    |||||||||||||||||||   ||||||||| ||||||  | |||||||||||||||  ||||||| | | || | |||||||||  |||||||||||||    
T  10067137 gcaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaagagagag--acttgggaaatca 10067233  T
Q  297 aagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||| | | |||||| ||||||||||||||||||||||   ||||||||||||||||||||||||    
T  10067234 aaggg-gaagctctagagtttagggttctttgattagagtacctcttgggttgaaaacatgggaaa 10067298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 22172664 - 22172879
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||| | |||| ||||| ||  |||||    
T  22172664 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagccagt-ttgca 22172762  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| ||||||||| |||  |||||||||||||||| ||||||| |         
T  22172763 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtca-accttggttccgtt 22172861  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||||||||||||||||||    
T  22172862 gcaaatcgtgacacgatt 22172879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 28503321 - 28503535
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||| |||||||||  |  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||||  ||||     
T  28503321 ttgatattggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-ttgct 28503419  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||| ||   ||||||| |||||||||||||| ||||||||||| |||| |||||||||   ||    
T  28503420 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtca-accttgggtcagac 28503518  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  28503519 gcaaatcgtgacacgat 28503535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 362
Target Start/End: Original strand, 800973 - 801060
Alignment:
Q  275 gagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt-gaaaacatgggaaa 362  Q
    |||||||||||||||||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||||    
T  800973 gagagagaaacttgggaaatcaaaggaagaaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaa 801060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 23200716 - 23200536
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||||  |||||| || ||||||||||| ||     
T  23200716 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgagct-ggtttgcagggtgccaaa 23200618  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| ||||||||||   ||||||||||||||    |||||| |||||||||| |||  |||||||||||||| |||||||    
T  23200617 tcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttg 23200536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 10211276 - 10211364
Alignment:
Q  271 ggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||||||  ||||||||||||||||||  | |||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  10211276 ggaagagagaga--cttgggaaatcaaagggaa-agctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaa 10211364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 266 - 349
Target Start/End: Complemental strand, 9636429 - 9636347
Alignment:
Q  266 gagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||| |||||||||||||||||||||||||||||| || |||| |||||||||||| |||||||||||||  ||||||||||||    
T  9636429 gagttggaagagagagaaacttgggaaatcaaaggaagaaactttagggtttaggg-tctttgattagagtctctcttgggttg 9636347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 5258440 - 5258365
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||    
T  5258440 gaagagagagaaacttgagaaatcaaagggagaaactttagggtttaggg-tctttgattagag-ttctcttgggttg 5258365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 10058271 - 10058410
Alignment:
Q  220 cagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggttta 318  Q
    ||||||||| ||||||  | |||||||||||||||  ||||||| | | || | |||||||||  |||||||||||||||||| | | |||||| |||||    
T  10058271 cagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaagagagag--acttgggaaatcaaaggg-gaagctctagagttta 10058366  T
Q  319 gggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  10058367 gggttctttgattagagtacctcttgggttgaaaacatgggaaa 10058410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 10060493 - 10060632
Alignment:
Q  220 cagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggttta 318  Q
    ||||||||| ||||||  | |||||||||||||||  ||||||| | | || | |||||||||  |||||||||||||||||| | | |||||| |||||    
T  10060493 cagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaagagagag--acttgggaaatcaaaggg-gaagctctagagttta 10060588  T
Q  319 gggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  10060589 gggttctttgattagagtacctcttgggttgaaaacatgggaaa 10060632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 10062715 - 10062854
Alignment:
Q  220 cagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggttta 318  Q
    ||||||||| ||||||  | |||||||||||||||  ||||||| | | || | |||||||||  |||||||||||||||||| | | |||||| |||||    
T  10062715 cagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaagagagag--acttgggaaatcaaaggg-gaagctctagagttta 10062810  T
Q  319 gggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  10062811 gggttctttgattagagtacctcttgggttgaaaacatgggaaa 10062854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 220 - 362
Target Start/End: Original strand, 10064937 - 10065076
Alignment:
Q  220 cagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggttta 318  Q
    ||||||||| ||||||  | |||||||||||||||  ||||||| | | || | |||||||||  |||||||||||||||||| | | |||||| |||||    
T  10064937 cagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaagagagag--acttgggaaatcaaaggg-gaagctctagagttta 10065032  T
Q  319 gggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||||||||||||   ||||||||||||||||||||||||    
T  10065033 gggttctttgattagagtacctcttgggttgaaaacatgggaaa 10065076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 1306591 - 1306411
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||| |||||||||||||  |  ||||||||| | || ||||| |||||||||| |||||| | || | |||||| || ||||||||||| ||     
T  1306591 cttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgagct-ggtttgcagggtgccaaa 1306493  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| |||||| | || |||||||||||||||  | |||||| |||||||||| |||  ||||||||| |||| |||||||    
T  1306492 tcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttg 1306411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 5260619 - 5260544
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  | |||| |||||||||||| ||||||||||||| |||||||||||||    
T  5260619 gaagagagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 5260544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 7762140 - 7762213
Alignment:
Q  274 agagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  7762140 agagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 7762213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 5236752 - 5236677
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||| ||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  5236752 gaagagagagaaacttgggaaatcgaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 5236677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 18657027 - 18656843
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||| |||||  |  ||||| ||| |||||||||| |||||||||| |||||| | |||| |||   | | |||||    
T  18657027 ttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgca 18656928  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||  || || ||||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  18656927 ggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 18656843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 29812935 - 29813010
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  29812935 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 29813010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 37408331 - 37408406
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  | |||| ||||||||| || ||||||||||||| |||||||||||||    
T  37408331 gaagagagagaaacttgggaaatcaaaggaggcaactttagggtttatgg-tctttgattagag-ttctcttgggttg 37408406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 45095037 - 45095112
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||| |  | |||| |||||||||||| ||||||||||||| |||||||||||||    
T  45095037 gaagagagagaaacttgggaaatcaaaagaggcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 45095112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 28503542 - 28503606
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||| |||||||||||||||||||| ||||||||||  |||||||||||| | ||||||||    
T  28503542 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagg 28503606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 32744721 - 32744647
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| |||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  32744721 aagagagaaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 32744647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 40735255 - 40735329
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||| || ||||||||||||    
T  40735255 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggtt 40735329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 7782699 - 7782586
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||| |||||  ||| ||||||||| |||| ||||| |||||||||| |||||| |||||  |||||| || ||||||||||| ||     
T  7782699 cttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgcggtgagct-ggtttgcagggtgccaaa 7782601  T
Q  108 tcgtggcacgatttg 122  Q
    ||||| |||||||||    
T  7782600 tcgtgacacgatttg 7782586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 26928093 - 26928273
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||||||||  ||  ||||||||| |||| ||||| |||||||||| |||| |  ||||| |||||| || ||||||||||| ||     
T  26928093 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagct-ggtttgcagggtgccaaa 26928191  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| ||| || | |   ||||||||||||||  | |||||| |||||||||| | |  ||||||||| |||| |||||||    
T  26928192 tcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttg 26928273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 40372478 - 40372532
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    |||||||||||||||| |||||||||||| ||||||||||  |||||||||||||    
T  40372478 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgca 40372532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 6718290 - 6718345
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattt 54  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||    
T  6718290 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 348
Target Start/End: Original strand, 7764340 - 7764414
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||||||||||||||||||||||||  |||||| ||| ||| |||| ||||||||||||  ||||||||||||    
T  7764340 gaagagagagaaacttgggaaatcaaaggaggtaactttagagttgaggg-tctttgattaga-tttctcttgggtt 7764414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 8512722 - 8512642
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  8512722 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 8512642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 8517602 - 8517522
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  8517602 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 8517522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 28501375 - 28501439
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||| |||||||||||||||||||| ||||||||||  |||| ||||||| | ||||||||    
T  28501375 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgcttttttgaagg 28501439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 39153656 - 39153582
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  39153656 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 39153582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 45282587 - 45282642
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattt 54  Q
    |||||||||||||||||||||||||||||||||  ||| ||||||||| |||||||    
T  45282587 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 8738754 - 8738809
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||||||||||||||| ||||||||||  |||||||||||| | ||||||||    
T  8738754 cacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttgaagg 8738809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 9090992 - 9091047
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||||||||||||||| ||||||||||  |||||||||||| | ||||||||    
T  9090992 cacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttgaagg 9091047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 22172904 - 22172967
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||||||||| ||||||||||  |||||||||||| | |||||||    
T  22172904 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 22172967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 215
Target Start/End: Original strand, 33386150 - 33386357
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||| | |||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  33386150 cttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 33386248  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcg 205  Q
    ||||| |||||||| |   ||||||||||||||  | |||||| || ||||||| | |  |||||||  ||||| || ||||||| ||||| |  |||||    
T  33386249 tcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggtcgtatcttgggtcgtacgtatcaatcg 33386347  T
Q  206 tgacacgatt 215  Q
    ||||||||||    
T  33386348 tgacacgatt 33386357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 182
Target Start/End: Original strand, 2672431 - 2672604
Alignment:
Q  11 cttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcagggtgcaaatt 108  Q
    ||||||||||||||||||||||||   |  |||||||  |||||||||  |||||||||| ||    ||||||  |||| | | |||| ||  ||||| |    
T  2672431 cttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcggagatgccgggagccaagtttgctggaagcaaaat 2672530  T
Q  109 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    |||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  2672531 cgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 2672604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 27352312 - 27352357
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    |||||||||||||||||||||||| ||||||  |||||||||||||    
T  27352312 cacgattgcttcagaggaaggctaatatatattgtgttcttgtgca 27352357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 32475966 - 32475885
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcat 183  Q
    ||||| ||||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  |||||||||||||||||    
T  32475966 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat 32475885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 183
Target Start/End: Complemental strand, 32480824 - 32480743
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcat 183  Q
    ||||| ||||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  |||||||||||||||||    
T  32480824 gcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat 32480743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 11 - 140
Target Start/End: Original strand, 37408049 - 37408179
Alignment:
Q  11 cttcaaatttgtggtctggaagaagga--aaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||| ||||||||  |  ||||||||| |||||| ||| |||||||||| |||| | | |||| |||||| || ||||||||||  ||     
T  37408049 cttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgagct-ggtttgcagggtgtcaaa 37408147  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgat 140  Q
    ||||||||||| ||| | |||||||||||||||    
T  37408148 tcgtggcacga-ttgtgtaaatcgtgacacgat 37408179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 51398686 - 51398761
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||| |||||||||||||||||||||  |||||| ||||||| || | ||||||||||||| || ||||||||||    
T  51398686 gaagagatagaaacttgggaaatcaaaggaggtaactttagggttgagag-tctttgattagag-ttttcttgggttg 51398761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 760720 - 760794
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  760720 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaaggg-tctttgattagag-ttctcttgggttg 760794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 9581156 - 9581230
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  9581156 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaaggg-tctttgattagag-ttctcttgggttg 9581230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 19684184 - 19684110
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  19684184 aagagaggaaaacttgggaaatcaaaggagttaactttagggttaaggg-tctttgattagag-ttctcttgggttg 19684110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 24968599 - 24968519
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||| ||  ||||||||||||||||    
T  24968599 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca 24968519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 29196696 - 29196637
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||| |||||||||||||||||||  |||||| ||||||| |||| |||||||||||    
T  29196696 aagagagaaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattag 29196637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 335
Target Start/End: Complemental strand, 2075364 - 2075304
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagag 335  Q
    ||||||||||||||||||||||||||  |||||||| ||||||| || | |||||||||||||    
T  2075364 aagagagagaaacttgggaaatcaaa-tgagtaactttagggttgagag-tctttgattagag 2075304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 24968481 - 24968419
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaa 262  Q
    |||||||| ||||||| |||||| | ||| ||||||| |||||||||||||||| | ||||||    
T  24968481 aaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgcttatttgaa 24968419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 44331429 - 44331471
Alignment:
Q  274 agagagagaaacttgggaaatcaaagggagtaactctagggtt 316  Q
    |||||||||||||||||||||||||||  |||||| |||||||    
T  44331429 agagagagaaacttgggaaatcaaaggaggtaactttagggtt 44331471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 191
Target Start/End: Complemental strand, 7782603 - 7782538
Alignment:
Q  126 aaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
    |||||||||||||||    |||||| |||||||||| ||| ||||||||||||||| | |||||||    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttggg 7782538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 29810740 - 29810815
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||| ||| |||||||||||||||||||  |||| | ||||||| |||| ||||||||||||| |||| ||||||||    
T  29810740 gaagaaagaaaaacttgggaaatcaaaggaggtaattttagggttgaggg-tctttgattagag-ttcttttgggttg 29810815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 140
Target Start/End: Complemental strand, 37726286 - 37726155
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||| |||||||  ||  ||||||||| |||| ||||  |||||||||| |||| | |||||| |||||| || ||||||||||  ||     
T  37726286 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgtcaaa 37726188  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgat 140  Q
    ||||| |||||||| |   ||||||||||||||    
T  37726187 tcgtgacacgattttgtggaatcgtgacacgat 37726155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 2676680 - 2676760
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| ||||| |||||| | || |||||||||||||||   ||||||| || |||||| |||  ||||||||||||||||    
T  2676680 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtca 2676760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 26386776 - 26386702
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| || | ||||||||||||| ||||||| |||||    
T  26386776 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgagag-tctttgattagag-ttctcttaggttg 26386702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 215
Target Start/End: Complemental strand, 32143884 - 32143726
Alignment:
Q  59 atcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtt 157  Q
    |||||||||| |||| | |||||| ||||||||  ||||||||||| || ||||| |||||| | |   ||||||||||||||  | |||||| ||||||    
T  32143884 atcgtgacacgattttgtgatgccgtgagctagt-ttgcagggtgccaaatcgtgacacgatcttgtggaatcgtgacacgattttcaaacttgctcgtt 32143786  T
Q  158 aagtatccttgataaggactggtcataccttgggttgtacgca--aatcgtgacacgatt 215  Q
    |||| | |  ||||||||| |||| ||||||| |  ||||| |  |||||||||||||||    
T  32143785 aagttttcaagataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatt 32143726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 44700787 - 44700728
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||  |||||| ||||||| | || |||||||||||    
T  44700787 aagagagagaaactagggaaatcaaaggaggtaactttagggttgatgg-tctttgattag 44700728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 148; Significance: 5e-78; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 5861 - 6243
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||  ||||||||||  ||||||||| |||   | |||| ||||||||||||||||    
T  5861 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacgattggaggtgccgtgagctagggttgcag 5960  T
Q  99 ggtgcaaattcgtggcacgatt-tgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    |||||||||||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  5961 ggtgcaaattcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 6060  T
Q  198 gcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagag 277  Q
    ||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  ||||||| |  || |||||||    
T  6061 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagagaggttggaagag 6159  T
Q  278 agagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6160 agagagacttgggaaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 6243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 144; Significance: 1e-75; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 8392984 - 8393365
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  8392984 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcag 8393083  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| |||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| ||||||||||||||| |  ||||||| ||||    
T  8393084 gggtgcaaat-cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtcttttcttgggtggtac 8393182  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag---gggagtgggaa 274  Q
    ||                    |||||||||||||||| |  ||||||||||||||  |||||||||||||||||||  |||||||   | | || ||||    
T  8393183 gcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaagtgttcttgtgcagatttgaagagagagggttggaa 8393280  T
Q  275 gagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  || ||||||||||||||| | | |||||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  8393281 gagagag--acctgggaaatcaaaggg-gaagctctagggtttatggttctttgattagagtatctcttgggttgaaaacatgggaaa 8393365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 8395193 - 8395574
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| |||||||||| |||||||||| |||||||||||| ||||||||||||||||    
T  8395193 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcag 8395292  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| ||| ||||||||||||||||||||||||| |||  ||||||| |||||||||||||| ||||||||||||||| |  ||||||| ||||    
T  8395293 gggtgcaaat-cgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtcgtttcttgggtggtac 8395391  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag---gggagtgggaa 274  Q
    ||                    |||||||||||||||| |  ||||||||||||||  |||||||||||||||||||  |||||||   | | || ||||    
T  8395392 gcagatcgtgacacgatttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaagtgttcttgtgcagatttgaagagagagggttggaa 8395489  T
Q  275 gagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  |||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  8395490 gagagag--acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 8395574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 7122269 - 7122486
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  7122269 ttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcag 7122368  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| ||||||||||||  || ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  7122369 gggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 7122467  T
Q  198 gcaaatcgtgacacgattg 216  Q
    |||||||||||||||||||    
T  7122468 gcaaatcgtgacacgattg 7122486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 363
Target Start/End: Original strand, 5137877 - 5138260
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||  ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  5137877 ttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 5137976  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||| | |||||||  | |    
T  5137977 gggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacgga 5138075  T
Q  197 cgcaaa--------------------tcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-ggga-gtgggaa 274  Q
    ||||||                    ||||||||||||||   ||||||||| ||||||  | |||||||||||||||  ||||||| | || || |||     
T  5138076 cgcaaatcgtgacacgattggacaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttgga- 5138173  T
Q  275 gagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaat 363  Q
     |||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  5138174 -agagagaaacttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaat 5138260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 5135651 - 5135869
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||  ||||||||  || ||||||||| |||||||||| |||||||| | |||||||||||| |||| |||||||||||    
T  5135651 ttgagattgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcag 5135750  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||| | |||||||  | |    
T  5135751 gggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacgga 5135849  T
Q  197 cgcaaatcgtgacacgattg 216  Q
    ||||||||||||||||||||    
T  5135850 cgcaaatcgtgacacgattg 5135869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 7124491 - 7124673
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgca- 97  Q
    ||||| ||||||||||||||||||| ||||||||  || ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||     
T  7124491 ttgagtttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcag 7124590  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtc 181  Q
    ||||||||| |||||||||||||  || ||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  7124591 gggtgcaaa-tcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 59 - 254
Target Start/End: Complemental strand, 29761196 - 29761001
Alignment:
Q  59 atcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtt 157  Q
    |||||||||| |||||| | |||| ||||||||  |||||||  || || |||||||||||| | || |||||||||||||||   ||||||| ||||||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 29761098  T
Q  158 aagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    |||||||||||||||||||||||||||||||||   | |||||||||||| ||||||| |||||||||||| ||||||||||  |||||||||||||    
T  29761097 aagtatccttgataaggactggtcataccttggtacggacgcaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 29761001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 200 - 362
Target Start/End: Complemental strand, 31495677 - 31495516
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| ||| ||||| ||| ||| |||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  31495677 aaatcgtgacacgattttatcagtggagggctaatatttaa-gtgttcttgtgcagatttgaaggagagttggaagagagagaaacttgggaaatcaaag 31495579  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggtt-gaaaacatgggaaa 362  Q
    |||||||||||||||||||  | |||||||||||||||||||||||||| | ||||||||||||    
T  31495578 ggagtaactctagggtttatag-tctttgattagagcttctcttgggttgggaaacatgggaaa 31495516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 24742575 - 24742360
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||| | |||| ||||||||  |||||    
T  24742575 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgca 24742477  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||| ||   | ||    
T  24742476 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggac 24742377  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||| ||||||    
T  24742376 gcaaatcgtgccacgat 24742360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 13992866 - 13992686
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||||| |||| | |||||| || ||||||||||| ||     
T  13992866 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgagct-ggtttgcagggtgccaaa 13992768  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| |||||||| || |||||||||||||||  | |||||| |||||||||| | | |||||||||||||||||||||||    
T  13992767 tcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttg 13992686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 181
Target Start/End: Complemental strand, 31495893 - 31495717
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    |||||||||||||||||||||||||||  ||| ||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| || |||||||||||    
T  31495893 ttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgc 31495795  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtc 181  Q
     || ||||| |||||||  || |||||||||||||||    |||||| |||||||||| ||| |||||||||||||||    
T  31495794 caaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 31495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 51521048 - 51520833
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||||  |||||    
T  51521048 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagctagt-ttgca 51520950  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || ||||| |||||||||   ||||||| |||||||||||||| |||||||||||| || ||||||||||   ||    
T  51520949 ggacgccaaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatc-taccttgggtcagac 51520851  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||||||||||||||||||    
T  51520850 gcaaatcgtgacacgatt 51520833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 6 - 182
Target Start/End: Original strand, 45347324 - 45347502
Alignment:
Q  6 attgtcttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcagggtgc 103  Q
    |||| ||||||||||||||||||||||||  ||  |||||||| |||||||||| |||||||||| |||   |||||| ||||| | | |||| || |||    
T  45347324 attggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgattagagatgccgtgagccaagtttgctggatgc 45347423  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  45347424 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 45347502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 56141513 - 56141728
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||| | |  | | ||||||||  |||||    
T  56141513 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagctagt-ttgca 56141611  T
Q  98 gggtgc-aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    ||  || ||| |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||| ||||||||||||||| ||||||||||   |    
T  56141612 ggacgccaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcaga 56141710  T
Q  197 cgcaaatcgtgacacgat 214  Q
     |||||||||||||||||    
T  56141711 tgcaaatcgtgacacgat 56141728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 11 - 213
Target Start/End: Original strand, 28467990 - 28468196
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||| ||||||||  |  ||||||||| |||| ||||| ||||| |||| |||| | |||||| |||||| || ||||||||||| ||     
T  28467990 cttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 28468088  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcg 205  Q
    ||||| |||||| | ||||||||||||||||||  | |||||| |||||||||| ||  ||||||||||||||| ||||||| |  |||||  |||||||    
T  28468089 tcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgtgacgtacgtacaaatcg 28468188  T
Q  206 tgacacga 213  Q
    ||||||||    
T  28468189 tgacacga 28468196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 276 - 362
Target Start/End: Original strand, 7122566 - 7122651
Alignment:
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7122566 agagagagacttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 7122651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 276 - 362
Target Start/End: Original strand, 7124785 - 7124870
Alignment:
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7124785 agagagagacttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 7124870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 349
Target Start/End: Complemental strand, 13992654 - 13992506
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg-gagtgggaagagagagaaacttgggaaatcaaa 298  Q
    ||||||||||||||||   |||| ||||| ||||||| ||| |||||||||||||  |||| |||| |||   |||||||||||||||||||||||||||    
T  13992654 aaatcgtgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagatttggagggagagcttgaagagagagaaacttgggaaatcaaa 13992556  T
Q  299 gggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    || || |||| |||||||||||| |||||||||||||  ||||||||||||    
T  13992555 ggtagcaactttagggtttaggg-tctttgattagagtctctcttgggttg 13992506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 276 - 363
Target Start/End: Original strand, 5135948 - 5136035
Alignment:
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg-aaaacatgggaaat 363  Q
    |||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||    
T  5135948 agagagaaacttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaat 5136035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 18856307 - 18856124
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||   | |||| ||||| | | |||| |    
T  18856307 ttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctg 18856208  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    | |||||| |||||||| ||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  18856207 gatgcaaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 18856124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 9223901 - 9224093
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttc-ggatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||| | |||||    
T  9223901 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagcta-gtttgca 9223999  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggt 192  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||| ||| ||||||||||    
T  9224000 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggt 9224093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 9228688 - 9228880
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttc-ggatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| |||||||||| |||||  |  ||| ||||||  | |||||    
T  9228688 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagct-cgtttgca 9228786  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggt 192  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||| ||| ||||||||||    
T  9228787 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggt 9228880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 5429551 - 5429626
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  5429551 gaagagagagaaacttgggaaatcaaaggaagtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 5429626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 48142914 - 48142989
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  48142914 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 48142989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 52082953 - 52082878
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  52082953 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 52082878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 52093960 - 52093885
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  52093960 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 52093885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 38 - 192
Target Start/End: Original strand, 18712296 - 18712449
Alignment:
Q  38 aaatcgtgaaacgattttgggatcgtgacacaatttcggatg-ccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgaca 136  Q
    ||||||||| |||||||||| |||||||||| |||||   || || ||||||||  |||||||  || || |||||||||||| | || |||||||||||    
T  18712296 aaatcgtgacacgattttggcatcgtgacacgatttcaagtggccgtgagctagt-ttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgaca 18712394  T
Q  137 cgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggt 192  Q
    ||||   ||||||| |||||||||||||  ||||||||||| |||| |||||||||    
T  18712395 cgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggt 18712449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 182
Target Start/End: Original strand, 45356861 - 45356983
Alignment:
Q  60 tcgtgacacaatttcggatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaa 159  Q
    ||||||||| ||||  |||||| ||||| | | |||| || |||||| |||||||||||| | || |||||||||||||||   ||||||| || |||||    
T  45356861 tcgtgacacgatttgagatgccgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaa 45356960  T
Q  160 gtatccttgataaggactggtca 182  Q
    |||||  ||||||||||||||||    
T  45356961 gtatcactgataaggactggtca 45356983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 3814603 - 3814421
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatg-ccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| |||||||||| |||||   || || | ||| | | |||||    
T  3814603 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagtttgca 3814505  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
     |  || || ||||| ||||||||||| |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  3814504 agacgccaaatcgtgtcacgatttggg-aaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 3814421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 5733245 - 5733061
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||| |||||  |  ||||| ||| |||||||||| |||||||||| |||||| | |||| |||   | | |||||    
T  5733245 ttgatattggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgca 5733146  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||  || || ||||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  5733145 ggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtca 5733061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 9927753 - 9927678
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  9927753 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 9927678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 12739846 - 12739771
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||| |||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  12739846 gaagagagagaaacttgagaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 12739771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 12748052 - 12747977
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||| |||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  12748052 gaagagagagaaacttgagaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 12747977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 37740498 - 37740573
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||| | ||||||| |||| ||||||||||||| |||||||||||||    
T  37740498 gaagagagagaaacttgggaaatcaaaggaggtaagtttagggttgaggg-tctttgattagag-ttctcttgggttg 37740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 52095658 - 52095583
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| ||||  |||||||||||| |||||||||||||    
T  52095658 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-actttgattagag-ttctcttgggttg 52095583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 56178932 - 56178857
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| | || ||||||||||||| |||||||||||||    
T  56178932 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaagg-tctttgattagag-ttctcttgggttg 56178857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 272 - 348
Target Start/End: Complemental strand, 30000101 - 30000027
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    |||||||||||||||||||||||||||||    |||| |||||||||||| ||||||||||||| ||||||||||||    
T  30000101 gaagagagagaaacttgggaaatcaaaggagacaactttagggtttaggg-tctttgattagag-ttctcttgggtt 30000027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 34570725 - 34570635
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| |||  |||| |||||||||||||||||||||||||  ||| || ||||||| |||| ||||||||||||| |||||||||||||    
T  34570725 tttgaaggagagctggaacagagagaaacttgggaaatcaaaggaggtagctttagggttgaggg-tctttgattagag-ttctcttgggttg 34570635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 54200201 - 54200127
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||| ||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  54200201 aagagagagaaacttaggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 54200127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 24742355 - 24742301
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    |||||||||||||||| |||||||||||| ||||||||||  |||||||||||||    
T  24742355 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgca 24742301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 3814383 - 3814320
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||||||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  3814383 aaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 3814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 9228909 - 9228972
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||||||||| ||||||||||  |||||||||||| | |||||||    
T  9228909 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 9228972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 18860519 - 18860450
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacac 68  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| ||||||||||    
T  18860519 ttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacac 18860450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 56141735 - 56141797
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaa 262  Q
    |||||||| ||||||| |||||||||||| ||||||||||  |||||||||||| | ||||||    
T  56141735 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaa 56141797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 26175932 - 26175857
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||| ||| |||| |||||||||| || |||| ||||||||    
T  26175932 gaagagagagaaacttgggaaatcaaaggaggtaactttagagttgaggg-tctttgattaaag-ttctgttgggttg 26175857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 5871693 - 5871767
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||| ||| || ||||||||||||| |||||||||||||    
T  5871693 aagagaggaaaacttgggaaatcaaaggaggtaactttaggg-ttatgggtctttgattagag-ttctcttgggttg 5871767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 13009726 - 13009652
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  ||||||||||||||||| |  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  13009726 aagagaggaaaacttgggaaatcaaatgaggtaactttagggttaaggg-tctttgattagag-ttctcttgggttg 13009652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 24968984 - 24969058
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| |||||||||||||||||||  |||||| || |||| | || ||||||||||||| |||||||||||||    
T  24968984 aagagagaaaaacttgggaaatcaaaggaggtaactttaaggttgacgg-tctttgattagag-ttctcttgggttg 24969058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 37230031 - 37229972
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||| ||||||| |||||||||||  |||||| |||||||||||| |||||||||||    
T  37230031 aagagagacaaacttgagaaatcaaaggaggtaactttagggtttaggg-tctttgattag 37229972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 45687491 - 45687432
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||  |||||| ||||||| |||| |||||||||||    
T  45687491 aagagagagaaactagggaaatcaaaggaggtaactttagggttgaggg-tctttgattag 45687432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 46147650 - 46147591
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||| |||||||||||||||||||  |||||| ||||||| |||| |||||||||||    
T  46147650 aagagagaaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattag 46147591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 253
Target Start/End: Complemental strand, 51520815 - 51520775
Alignment:
Q  213 attgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  51520815 attgcttcagaggaaggctagtatatattgtgttcttgtgc 51520775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 18712478 - 18712541
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  18712478 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 18712541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Complemental strand, 18856086 - 18856023
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  18856086 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 18856023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 29254368 - 29254441
Alignment:
Q  274 agagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||   ||||| ||||||| | || ||||||| ||||| |||||||||||||    
T  29254368 agagagagaaacttgggaaatcaaaggagataactttagggttgaagg-tctttgagtagag-ttctcttgggttg 29254441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 5370382 - 5370310
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttggg 346  Q
    ||||||||||||||||| |||||||||||    |||| |||||||||||| |||||||||| || ||||||||||    
T  5370382 gaagagagagaaacttgagaaatcaaaggagacaactttagggtttaggg-tctttgattatag-ttctcttggg 5370310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 12745732 - 12745661
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgg 345  Q
    ||||||||||||||||||||||  |||||  |||||| ||| ||| |||| ||||||||||||| |||||||||    
T  12745732 gaagagagagaaacttgggaaaaaaaaggaggtaactttagagttgaggg-tctttgattagag-ttctcttgg 12745661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 215
Target Start/End: Original strand, 31985236 - 31985327
Alignment:
Q  126 aaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgtgacacgatt 215  Q
    |||||||||||||||  | |||||| || ||||||| | |  |||||||||||||| ||||||| |  |||||||  |||||||||||||||    
T  31985236 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtaccttgtgacgtacgcatcaatcgtgacacgatt 31985327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 52467650 - 52467576
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||| ||| |||||||||  |||| | ||||||| |||| ||||||||||| | |||||||||||||    
T  52467650 aagagagagaaactagggtaatcaaaggaggtaattttagggttgaggg-tctttgattag-ggttctcttgggttg 52467576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 142; Significance: 2e-74; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 11 - 349
Target Start/End: Complemental strand, 9295 - 8956
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| || ||||||||||| ||     
T  9295 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaa 9197  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcg 205  Q
    ||||| || ||||||||||| ||||||||||||    |||||| |||||||||| ||| ||||||||||||||| |||||||||  |||||||  |||||    
T  9196 tcgtgacatgatttgggaaa-tcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcg 9098  T
Q  206 tgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagta 305  Q
    ||||||||||   |||| ||||||||||||| ||| |||||||||||||  |||  | | |||| |||||||||||||||||||||||||||||||||||    
T  9097 tgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttgaagagagttggaagagagagaaacttgggaaatcaaagggagta 8999  T
Q  306 actctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| ||||||| |||||||||||||||||||||||||||    
T  8998 actctaggctttaggg-tctttgattagagcttctcttgggttg 8956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 11 - 349
Target Start/End: Complemental strand, 11740 - 11382
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||| ||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||||  |||||| |||||| || ||||||||||| ||     
T  11740 cttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagct-ggtttgcagggtgccaaa 11642  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca------- 200  Q
    ||||| |||||||||||||| ||||||||||||    |||||| |||||||||| ||| ||||||||||||||| |||||||||  |||||||           
T  11641 tcgtgacacgatttgggaaa-tcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcg 11543  T
Q  201 --------------aatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaact 286  Q
                  |||||||||||||||   |||| ||||||||||||| ||| |||||||||||||  |||  | | |||| ||||||||||||||||    
T  11542 tgacacgatctggaaatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttgaagagagttggaagagagagaaact 11444  T
Q  287 tgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  11443 tgggaaatcaaagggagtaactctagggtttatgg-tctttgattagagcttctcttgggttg 11382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 3439090 - 3439473
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcgga-tgccatgagctagggttgca 97  Q
    ||||||||||||||||||||||||| ||||||||  |  ||||||||| |||||| ||| |||||||||| |||||||  |||| ||||||||| |||||    
T  3439090 ttgagattgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgagctagg-ttgca 3439188  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |  ||||||| ||||    
T  3439189 gggtgcaaaatcgtgacacgatttgggaaa-tcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtac 3439287  T
Q  198 gc--------------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag-gggagtggga--a 274  Q
    ||                    |||||||||||||||| |  ||||||||| ||||  |||||||||||||||||||  ||||||| | |||| |||  |    
T  3439288 gcatatcgtggcacgattgggaaaatcgtgacacgatttcaacagaggaagactag--tataaagtgttcttgtgcagatttgaagagagagttggaaga 3439385  T
Q  275 gagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  3439386 gagagagagacttgagaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 3439473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 15290145 - 15290493
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||| ||||||||||||| | ||||| |||||||||||| |||| |||||||||||    
T  15290145 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgcag 15290244  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||  | |||||||  | |    
T  15290245 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggacgga 15290343  T
Q  197 cgcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatca 296  Q
    ||||||||||||||||||||   ||||||||| ||||||  | |||||||||||||||  |||||              ||||||| |||||||||||||    
T  15290344 cgcaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttga--------------agagagagacttgggaaatca 15290428  T
Q  297 aagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||  | |||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  15290429 aaggga-aagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaa 15290493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 15470514 - 15470862
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||| ||||||||||||| | ||||| |||||||||||| |||| |||||||||||    
T  15470514 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgcag 15470613  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||  | |||||||  | |    
T  15470614 gggtgcaaat-cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggacgga 15470712  T
Q  197 cgcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatca 296  Q
    ||||||||||||||||||||   ||||||||| ||||||  | |||||||||||||||  |||||              ||||||| |||||||||||||    
T  15470713 cgcaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttga--------------agagagagacttgggaaatca 15470797  T
Q  297 aagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||  | |||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  15470798 aaggga-aagctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaa 15470862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 59 - 362
Target Start/End: Original strand, 25689604 - 25689924
Alignment:
Q  59 atcgtgacacaatttcggatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgtta 158  Q
    |||||||||| ||||||| |||| ||||||||| |||||||||||||| |||||||||||||  || ||||||| ||||||||||||||||| |||||||    
T  25689604 atcgtgacacgatttcgggtgccgtgagctagg-ttgcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgtta 25689702  T
Q  159 agtatccttgataaggactggtcataccttgggttgtac--------------------gcaaatcgtgacacgattgcttcagaggaaggctagtatat 238  Q
    ||||||||||||||||||||||| | |||||| ||||||                    | ||||||||||||||||||  ||||||||||||||||| |    
T  25689703 agtatccttgataaggactggtcgttccttggtttgtacacaaatcgtgacacgattgagaaaatcgtgacacgattgcaacagaggaaggctagtat-t 25689801  T
Q  239 aaagtgttcttgtgcatctttgaagggga-gtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagct 337  Q
     ||||||||||||||||||||||||  || || |||||||||||  |||||||||||||||||||| | |||||||||||||||||||||||||||||      
T  25689802 taagtgttcttgtgcatctttgaagaagaggttggaagagagag--acttgggaaatcaaagggagaagctctagggtttagggttctttgattagagta 25689899  T
Q  338 tctcttgggttgaaaacatgggaaa 362  Q
    |||||||||||||||||||||||||    
T  25689900 tctcttgggttgaaaacatgggaaa 25689924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 42575907 - 42575523
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||| ||||||||  || ||||||||| ||||||||||||||| ||||| |||||||||||| |||| |||||||||||    
T  42575907 ttgagattgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagttagggttgcag 42575808  T
Q  99 gg-tgcaaattcgtggcacgattt-gggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    || ||||||| |||| |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | |    
T  42575807 gggtgcaaat-cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggacgga 42575709  T
Q  197 cgcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg----gagtggg 272  Q
    |||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  ||||||| |    |||| ||    
T  42575708 cgcaaatcgtgacacgattgggcaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagagagaggagttgg 42575610  T
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||||  ||||||||||||||||||  | |||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  42575609 aagagagaga--cttgggaaatcaaagggaa-agctctagggtttagggttctttgattagagtacctcttgggttgaaaacatgggaaa 42575523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 36980012 - 36979797
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||| | |||| ||||||||  |||||    
T  36980012 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgca 36979914  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | ||||||||||||||||||   ||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  36979913 ggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgtac 36979814  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  36979813 gcaaatcgtgacacgat 36979797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 264
Target Start/End: Original strand, 33037289 - 33037554
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||| | |||| ||||||||  |||||    
T  33037289 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgca 33037387  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || ||||| |||||| | || |||||||||||||||   ||||||| ||| |||||||||  ||||||||||||||||| ||||||   | ||    
T  33037388 ggacgccaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacggac 33037487  T
Q  198 gcaaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||||||||||||||||||||| | || ||||||||||  |||||||||||| | ||||||||    
T  33037488 gcaaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgcttttttgaagg 33037554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 4759536 - 4759751
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||  |||||||||| |||||| | |||| ||||||||  |||||    
T  4759536 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagctagt-ttgca 4759634  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||||||||||||||||||||||||||||   | ||    
T  4759635 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggac 4759734  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  4759735 gcaaatcgtgacacgat 4759751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 30656280 - 30656065
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  | |||| ||||||||  |||||    
T  30656280 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-ttgca 30656182  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| ||||||||||||||||||||||||||||||| |||||||||   ||    
T  30656181 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagac 30656082  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  30656081 gcaaatcgtgacacgat 30656065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 2627582 - 2627704
Alignment:
Q  240 aagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttc 339  Q
    |||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  2627582 aagtgttcttgtgcagatttgaaggagagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttc 2627680  T
Q  340 tcttgggtt-gaaaacatgggaaa 362  Q
    ||||||||| | ||||||||||||    
T  2627681 tcttgggttgggaaacatgggaaa 2627704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 18852629 - 18852845
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  | |||| ||||||||  |||||    
T  18852629 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-ttgca 18852727  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||||||||||||||||||   ||    
T  18852728 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagac 18852827  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||| ||||||||||||||    
T  18852828 gcagatcgtgacacgatt 18852845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 18870023 - 18870239
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  |||| | ||||||||  |||||    
T  18870023 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagctagt-ttgca 18870121  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  | ||||||||||||||||||||||||   ||    
T  18870122 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcagac 18870221  T
Q  198 gcaaatcgtgacacgatt 215  Q
    ||| ||||||||||||||    
T  18870222 gcagatcgtgacacgatt 18870239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 12 - 214
Target Start/End: Original strand, 1261428 - 1261634
Alignment:
Q  12 ttcaaatttgtggtctggaagaaggaa--aatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaatt 108  Q
    |||||||||||||| ||||||||   |  ||||| || |||| ||||| |||||||||| |||||| |||||| ||||||||  ||||||||||| || |    
T  1261428 ttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagt-ttgcagggtgccaaat 1261526  T
Q  109 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcgt 206  Q
    |||| |||||| | || |||||||||||||||  | |||||| ||||||||||||||||||||||||||||||||||||||||   ||||  ||||||||    
T  1261527 cgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacatacgttcaaatcgt 1261626  T
Q  207 gacacgat 214  Q
    ||||||||    
T  1261627 gacacgat 1261634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 7289429 - 7289644
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttc--ggatgccatgagctagggttgc 96  Q
    |||| |||| ||||||||||||||||||||||||  |  |||| |||| |||||||||| |||||||||| |||||  ||  ||||||||||||  ||||    
T  7289429 ttgatattgacttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagctagt-ttgc 7289527  T
Q  97 agggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgta 196  Q
    |||  || || ||||| |||||| | ||||||||||||||||||   ||||||| |||||||||||||| ||||||||||| ||| |||||||| |   |    
T  7289528 aggacgccaaatcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-taccttggatcaga 7289626  T
Q  197 cgcaaatcgtgacacgat 214  Q
     |||||||||||||||||    
T  7289627 tgcaaatcgtgacacgat 7289644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 10683741 - 10683924
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  | |||| ||||||||  |||||    
T  10683741 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-ttgca 10683839  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||||||||    
T  10683840 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtca 10683924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 181
Target Start/End: Original strand, 2627331 - 2627503
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||||||||  ||| ||||||||| |||| ||||| |||||||||| |||||| ||| || |||||| || ||||| ||||| ||     
T  2627331 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgagct-ggtttgcatggtgccaaa 2627429  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtc 181  Q
    ||||| |||||||| || |||||||||||||||    |||||| |||||||||| ||| ||||||||| |||||    
T  2627430 tcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtc 2627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 216
Target Start/End: Complemental strand, 6311928 - 6311717
Alignment:
Q  6 attgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtg 102  Q
    |||| ||||||||||||||||||||||||  |  ||||| ||| |||||||||| |||||||||| |||||  | |||| ||||||||  |||||||  |    
T  6311928 attggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-ttgcaggacg 6311830  T
Q  103 caaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaa 202  Q
    | || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  | ||||||||| |||| |||||||||   | |||||    
T  6311829 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtca-accttgggtcagatgcaaa 6311731  T
Q  203 tcgtgacacgattg 216  Q
    ||||||||||||||    
T  6311730 tcgtgacacgattg 6311717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 39784327 - 39784510
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||   | |||| ||||| | | |||| |    
T  39784327 ttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctg 39784426  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    | |||||| |||||||||||| | || |||||||||||||||   |||||||  | ||||||||||  ||||||||||||||||    
T  39784427 gatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca 39784510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 26288504 - 26288324
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||  |||| | |||||| |||||| || ||||||||||| ||     
T  26288504 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 26288406  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| ||| || | || |||||||||||| ||  | |||||| |||||||||| ||| ||||||||||||||| |||||||    
T  26288405 tcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttg 26288324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 26301761 - 26301581
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||  |||| | |||||| |||||| || ||||||||||| ||     
T  26301761 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 26301663  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| ||| || | || |||||||||||| ||  | |||||| |||||||||| ||| ||||||||||||||| |||||||    
T  26301662 tcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttg 26301581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 26313755 - 26313575
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||  |||| | |||||| |||||| || ||||||||||| ||     
T  26313755 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 26313657  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| ||| || | || |||||||||||| ||  | |||||| |||||||||| ||| ||||||||||||||| |||||||    
T  26313656 tcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttg 26313575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 17982525 - 17982600
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  17982525 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 17982600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 31218129 - 31218204
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  31218129 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 31218204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 30143214 - 30143289
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  30143214 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 30143289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 34254624 - 34254549
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  | |||| |||||||||||| ||||||||||||| |||||||||||||    
T  34254624 gaagagagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 34254549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 43036295 - 43036370
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  43036295 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 43036370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 33352007 - 33352097
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| |||  |||||||||||||||||||||||||||||   |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  33352007 tttgaaggtgaggtggaagagagagaaacttgggaaatcaaagaaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 33352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 349
Target Start/End: Complemental strand, 1746515 - 1746439
Alignment:
Q  271 ggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||||| || |||||||||| ||||||| |||||    
T  1746515 ggaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tccttgattagag-ttctctttggttg 1746439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 12702934 - 12702859
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||| | ||||||| |||| ||||||||||||| |||||||||||||    
T  12702934 gaagagagagaaacttgggaaatcaaaggaggtaaatttagggttgaggg-tctttgattagag-ttctcttgggttg 12702859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 15212658 - 15212733
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||| |  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  15212658 gaagagagagaaacttgggaaatcaaatgaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 15212733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 42498066 - 42498141
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  42498066 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaag-ttctcttgggttg 42498141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 44303726 - 44303801
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||| ||||||||||| |  |||| |||||||||||| ||||||||||||| |||||||||||||    
T  44303726 gaagagagagaaacttgagaaatcaaaggaaacaactttagggtttaggg-tctttgattagag-ttctcttgggttg 44303801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 1261639 - 1261703
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    ||||||||||||||||   |||||||||||||||||| |||||||||||||||| | ||||||||    
T  1261639 aaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgcttttttgaagg 1261703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 216
Target Start/End: Original strand, 10688710 - 10688817
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtg 207  Q
    |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  | ||||||||| |||| |||||||||   | ||||||||||    
T  10688710 tcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtca-accttgggtcagatgcaaatcgtg 10688808  T
Q  208 acacgattg 216  Q
    |||||||||    
T  10688809 acacgattg 10688817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 274 - 349
Target Start/End: Original strand, 4733683 - 4733756
Alignment:
Q  274 agagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||| |  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  4733683 agagagagaaacttgggaaatcaaaagaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 4733756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 347
Target Start/End: Complemental strand, 19945656 - 19945583
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggt 347  Q
    ||||||||| ||||||||||||||||||| || |||| |||||||||| | ||||||||||||| |||||||||||    
T  19945656 gaagagagacaaacttgggaaatcaaaggaagcaactttagggtttagag-tctttgattagag-ttctcttgggt 19945583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 335
Target Start/End: Complemental strand, 19948617 - 19948555
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagag 335  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||| | |||||||||||||    
T  19948617 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagag-tctttgattagag 19948555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 25327666 - 25327858
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgcca-tgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| ||||||||||  ||||| ||| |||||   || |  ||||||||  |||||    
T  25327666 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggctgtgagctagt-ttgca 25327764  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggt 192  Q
    ||  || || || ||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||| |||| |||||||||    
T  25327765 ggacgccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggt 25327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 4731530 - 4731605
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||  ||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  4731530 gaagagagagaaacttgaaaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 4731605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 31042921 - 31043032
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||||||||  ||  ||||||||| |||| ||||| |||||||||| |||||| | |||| |||||| || ||||||||||| ||     
T  31042921 cttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgagct-ggtttgcagggtgccaaa 31043019  T
Q  108 tcgtggcacgatt 120  Q
    ||||| |||||||    
T  31043020 tcgtgacacgatt 31043032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 272 - 356
Target Start/End: Complemental strand, 34256800 - 34256718
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacat 356  Q
    ||||| ||| |||||||||||||||||||  | |||| |||||||||||| ||||||||||||| || |||||||||| ||||||    
T  34256800 gaagaaagataaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagag-ttatcttgggttggaaacat 34256718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 35745873 - 35745793
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  35745873 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtca 35745793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 18852858 - 18852913
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||||||||||||||| ||||||||||  |||||||||||| | ||||||||    
T  18852858 cacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagg 18852913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 7289651 - 7289713
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaa 262  Q
    |||||||| ||||||| |||||||||||| ||||||||||  |||||||||||| | ||||||    
T  7289651 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaa 7289713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 349
Target Start/End: Original strand, 27811149 - 27811225
Alignment:
Q  271 ggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||| |||||||||||||||  |||| | ||||||| |||| ||||||||||||| ||||||| |||||    
T  27811149 ggaagagagagaaaattgggaaatcaaaggaggtaaatttagggttgaggg-tctttgattagag-ttctcttaggttg 27811225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 10929674 - 10929747
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| |||||||  ||| ||||||||||||| |||||||||||||    
T  10929674 aagagaggaaaacttgggaaatcaaaggaggtaactttagggtt--ggggtctttgattagag-ttctcttgggttg 10929747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25689563 - 25689596
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa 34  Q
    ||||||||||||||||||||||||||||||||||    
T  25689563 ttgagattgtcttcaaatttgtggtctggaagaa 25689596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 3303965 - 3303891
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| |||||||||||||||||||  |||||| || |||| |||| ||||||||||| | |||||||||||||    
T  3303965 aagagagaaaaacttgggaaatcaaaggaggtaactttacggttgaggg-tctttgattag-ggttctcttgggttg 3303891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 6598845 - 6598919
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  6598845 aagagaggaaaacttgggaaatcaaaggagataactttagggttgaggg-tctttgattagag-ttctcttgggttg 6598919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 6674298 - 6674372
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||   ||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  6674298 aagagaggaaaacttgggaaatcaaaggagataactttagggttgaggg-tctttgattagag-ttctcttgggttg 6674372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 349
Target Start/End: Original strand, 10015030 - 10015095
Alignment:
Q  282 aaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||  |||||| || |||| |||| ||||||||||||| |||||||||||||    
T  10015030 aaacttgggaaatcaaaggacgtaactttatggttgaggg-tctttgattagag-ttctcttgggttg 10015095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 18870252 - 18870307
Alignment:
Q  209 cacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||||||||||| ||| ||||||||||  |||||||||||| | ||||||||    
T  18870252 cacgattgcttcagagaaagactagtatatattgtgttcttgtgcttttttgaagg 18870307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 25327887 - 25327950
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  25327887 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 25327950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 39784548 - 39784611
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||| ||||| ||||||||||  |||||||||||| | |||||||    
T  39784548 aaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 39784611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 161
Target Start/End: Complemental strand, 7412939 - 7412787
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatt-tcggatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||| |||||||  ||  ||||||||| |||||||||| |||||||||| ||| |   ||||| |||||| || ||||||||||  ||     
T  7412939 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgagct-ggtttgcagggtgtcaaa 7412841  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagt 161  Q
    |||||| || |||| |  |||||||||||||||  | |||||| || |||||||    
T  7412840 tcgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 7412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 200 - 254
Target Start/End: Original strand, 10688822 - 10688876
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    |||||||| ||| ||| |||||||||||| ||||||||||  |||||||||||||    
T  10688822 aaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgca 10688876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 5689144 - 5689203
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||   ||||| ||||||| |||| |||||||||||    
T  5689144 aagagagagaaactagggaaatcaaaggagataactttagggttgaggg-tctttgattag 5689203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 40320940 - 40320999
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||  |||||| | ||||| |||| |||||||||||    
T  40320940 aagagagagaaactagggaaatcaaaggaggtaactttcgggttgaggg-tctttgattag 40320999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 3183 - 2802
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  3183 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcag 3084  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| ||||||||||||  || ||||||||||||||||  ||||||| |||||||||||| ||||||||||||||||| | |||||||  | ||    
T  3083 gggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggacggac 2985  T
Q  198 gcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtg--ggaag 275  Q
    ||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  |||||||| ||| |  |||||    
T  2984 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaaggagagagttggaag 2886  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  2885 agagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 2802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 3e-73; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 12647965 - 12647584
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  12647965 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcag 12647866  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| ||||||||||||  || ||||||||||||||||   |||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  12647865 gggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 12647767  T
Q  198 gcaaatcgtgacacgatt----------------gctt----cagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtg--ggaag 275  Q
    ||||||||||||||||||                | ||    ||||||||| ||||||  ||| |||||||||||||  |||||||| ||| |  |||||    
T  12647766 gcaaatcgtgacacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaaggagagagttggaag 12647668  T
Q  276 agagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12647667 agagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 12647584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 200 - 362
Target Start/End: Original strand, 6266499 - 6266660
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| ||| ||||||||| ||| |||||||||||||  |||||||| ||||||||||||||||| ||||||||||||||||    
T  6266499 aaatcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggagagtgggaagagagagagacttgggaaatcaaag 6266597  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    |||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  6266598 ggagcaactctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 6266660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 200 - 349
Target Start/End: Complemental strand, 4484698 - 4484551
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| ||||||||||||| ||| |||||||||||||  |||||| | |||| |||||||||||||||||||||||||||||    
T  4484698 aaatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagatttgaaagagagttggaagagagagaaacttgggaaatcaaag 4484600  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4484599 ggagtaactctagggtttaggg-tctttgattagagcttctcttgggttg 4484551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 9295864 - 9296079
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| |||||  | |||| ||||||||  |||||    
T  9295864 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctagt-ttgca 9295962  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||| || |||||||||||| | || |||||||||||||||   ||||||| ||| ||||||||||||||||||||||||||||||||||||| | ||    
T  9295963 ggatgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcggac 9296062  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  9296063 gcaaatcgtgacacgat 9296079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 14292123 - 14291908
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| || ||| | |||| ||||||||  |||||    
T  14292123 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagctagt-ttgca 14292025  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| ||||||||||| |  |||||||||||||||||||||||||||||||    
T  14292024 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgtac 14291925  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  14291924 gcaaatcgtgacacgat 14291908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 11098389 - 11098604
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| || ||||||| |||||  | |||| ||||||||  |||||    
T  11098389 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgagctagt-ttgca 11098487  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  |||||||||||||||| ||||||||||||||    
T  11098488 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgtac 11098587  T
Q  198 gcaaatcgtgacacgat 214  Q
    |||||||||||||||||    
T  11098588 gcaaatcgtgacacgat 11098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 348
Target Start/End: Original strand, 32289161 - 32289519
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  32289161 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 32289259  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgc-------- 199  Q
    || || |||||| | |   ||||||||||||||    |||||| |||||||||| ||| ||||||||||||||| |||||||||  ||||||            
T  32289260 tcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgctccaatcg 32289359  T
Q  200 -------------aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaact 286  Q
                 ||||||||||||||||   |||| ||| ||||||||| ||| |||||||||||||  |||  | |||||  ||||||||||||||||    
T  32289360 tgacacgacctggaaatcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagattttgaagggagatggaagagagagaaact 32289458  T
Q  287 tgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt 348  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  32289459 tgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggtt 32289519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 200 - 349
Target Start/End: Original strand, 30833146 - 30833293
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaag 299  Q
    ||||||||||||||||   |||| ||||| ||||||| ||| |||||||||||||  |||||||| |||  |||||||| ||||||||||||||||||||    
T  30833146 aaatcgtgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagatttgaaggtgagctggaagagaaagaaacttgggaaatcaaag 30833244  T
Q  300 ggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  30833245 ggagtaactctagggtttagggtt-tttgattagagcttatcttgggttg 30833293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 25410253 - 25410073
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||| | || ||||||||||| ||     
T  25410253 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagat-ggtttgcagggtgccaaa 25410155  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| |||||| | || |||||||||||||||  | |||||| |||||||||||||||||||||||| ||||| |||||||    
T  25410154 tcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtcgtaccttg 25410073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 181
Target Start/End: Original strand, 6266283 - 6266459
Alignment:
Q  7 ttgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgc 103  Q
    |||||||||||||||||||||||||||  | | ||||||||| |||| ||||  ||||||||||||||||| |||||| |||||| || |||||||||||    
T  6266283 ttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgagct-ggtttgcagggtgc 6266381  T
Q  104 aaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtc 181  Q
     || ||||| |||||||  || |||||||||||||||    |||||| |||||||||| ||| ||||||||| |||||    
T  6266382 caaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtc 6266459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 189
Target Start/End: Complemental strand, 3492364 - 3492184
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||| |||||  |  |||| |||| |||| ||||| |||||||||| |||| | |||||| |||||| || ||||||||||| ||     
T  3492364 cttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgagct-ggtttgcagggtgccaaa 3492266  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| |||||| | || |||||||||||||||  |||||||| |||||||||| |||  ||||||||| |||| |||||||    
T  3492265 tcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagtttccaggataaggacaggtcgtaccttg 3492184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 189
Target Start/End: Original strand, 30832934 - 30833114
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| | || ||||  |||||||||| |||||| |||||| |||||| || ||||||||||| ||     
T  30832934 cttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaa 30833032  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||| |||||| | || |||||||||||||||  | |||||| |||||||||| |||  ||||||||| |||| |||||||    
T  30833033 tcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttg 30833114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 4503428 - 4503353
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| ||||||||| |||||||||||||||| |||||||||||||    
T  4503428 gaagagagagaaacttgggaaatcaaaggaagcaactttagggttta-ggttctttgattagag-ttctcttgggttg 4503353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 36205959 - 36205884
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  36205959 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 36205884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 45099627 - 45099702
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  45099627 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 45099702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 4484910 - 4484728
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||||  |||||| ||||||||  ||||||||||| ||     
T  4484910 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgagctagt-ttgcagggtgccaaa 4484812  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
    ||||| |||||| |     ||||||||||||||    |||||| |||||||||| ||  ||||||||||||||| |||||||||    
T  4484811 tcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttggg 4484728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 32247350 - 32247229
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||| |||||||||| ||||  |||||| ||||| | | |||| |    
T  32247350 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatttgagatgccgtgagccaagtttgctg 32247251  T
Q  99 ggtgcaaattcgtggcacgatt 120  Q
    | |||||| |||||||||||||    
T  32247250 gatgcaaaatcgtggcacgatt 32247229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 9296084 - 9296137
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  9296084 aaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgc 9296137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 36988371 - 36988296
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  36988371 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 36988296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 39284757 - 39284832
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  39284757 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 39284832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 2334713 - 2334638
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  |||||| ||||||| |||| | ||||||||||| |||||||||||||    
T  2334713 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tatttgattagag-ttctcttgggttg 2334638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 5723550 - 5723475
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||||||||||||  | |||| |||||||| ||| ||||||||||||| |||||||||||||    
T  5723550 gaagagagagaaacttgggaaatcaaaggaggcaactttagggttt-ggggtctttgattagag-ttctcttgggttg 5723475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 38312112 - 38312187
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||| |||||||||||||||  |||||| ||||||| | |||||||||||||||| |||||||||||||    
T  38312112 gaagagagagaaatttgggaaatcaaaggaggtaactttagggttga-ggttctttgattagag-ttctcttgggttg 38312187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 39811479 - 39811657
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatg-ccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| |||||||||| |||||   || || | ||| | | |||||    
T  39811479 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagtttgca 39811577  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggact 177  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  |||||||||||    
T  39811578 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggact 39811657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 11151886 - 11151812
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  11151886 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 11151812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 42362225 - 42362299
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||||||||||||    
T  42362225 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttctcttgggttg 42362299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 44310473 - 44310548
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttc 74  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| |||||||||| |||||    
T  44310473 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 39811700 - 39811763
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaag 263  Q
    |||||||| ||||||| |||||||||||| ||||||||||  |||||||||||| | |||||||    
T  39811700 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 39811763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 40739444 - 40739236
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||||||||  ||  ||||||||| |||| ||||| |||||||||| |||| |  ||||| |||||| || ||||||||||| ||     
T  40739444 cttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgagct-ggtttgcagggtgccaaa 40739346  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcg 205  Q
    ||||| |||||| | |   ||| ||||||| ||  | |||||| |||||||||| | |  ||||||||| |||| ||||||| |  ||||| |  |||||    
T  40739345 tcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgacgtacgtatcaatcg 40739246  T
Q  206 tgacacgatt 215  Q
    ||||||||||    
T  40739245 tgacacgatt 40739236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 272 - 346
Target Start/End: Complemental strand, 6595302 - 6595230
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttggg 346  Q
    |||||||||||||||| |||||||||| |  |||||| ||||||| |||| ||||||||||||| ||||||||||    
T  6595302 gaagagagagaaacttaggaaatcaaatgaggtaactttagggttgaggg-tctttgattagag-ttctcttggg 6595230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 11690374 - 11690448
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  |||||||||||||||||||  |||||| ||||||| |||| |||||||||| || |||||||||||||    
T  11690374 aagagaggaaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattatag-ttctcttgggttg 11690448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 17057680 - 17057590
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| ||||  ||||||||||||| || ||||||||| ||  |||||| ||||||| | || ||||||||||||| |||||||||||||    
T  17057680 tttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggtaactttagggttgaagg-tctttgattagag-ttctcttgggttg 17057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 349
Target Start/End: Complemental strand, 17085663 - 17085573
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||| ||||  ||||||||||||| || ||||||||| ||  |||||| ||||||| | || ||||||||||||| |||||||||||||    
T  17085663 tttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggtaactttagggttgaagg-tctttgattagag-ttctcttgggttg 17085573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 19344904 - 19344824
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| || ||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  19344904 gcaaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 19344824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 19349762 - 19349682
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   |||||||  | ||||||||||  ||||||||||||||||    
T  19349762 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtca 19349682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Complemental strand, 33162745 - 33162686
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    ||||||||||||||||||||||||||||  |||| | ||||||| |||| |||||||||||    
T  33162745 aagagagagaaacttgggaaatcaaaggaggtaattttagggttgaggg-tctttgattag 33162686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 36318304 - 36318230
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||  |||||| ||||||| |  | ||||||||||||| || ||||||||||    
T  36318304 aagagagagaaacttgggaaatcaaaggaggtaactttagggttgaatg-tctttgattagag-ttatcttgggttg 36318230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 333
Target Start/End: Original strand, 36773422 - 36773481
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    |||||||||||||| |||||||||||||  |||||| ||||||| |||| |||||||||||    
T  36773422 aagagagagaaactagggaaatcaaaggaggtaactttagggttgaggg-tctttgattag 36773481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 724030 - 723965
Alignment:
Q  282 aaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||||||  |||||| ||||||| |||| ||||||||||||| |||| ||||||||    
T  724030 aaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttcttttgggttg 723965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 300
Target Start/End: Complemental strand, 2837155 - 2837112
Alignment:
Q  257 tttgaaggggagtgggaagagagagaaacttgggaaatcaaagg 300  Q
    |||||||| ||||  |||||||||||||||||||||||||||||    
T  2837155 tttgaaggagagtttgaagagagagaaacttgggaaatcaaagg 2837112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 349
Target Start/End: Complemental strand, 14202702 - 14202628
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||  ||||||||||||||||| |  |||||| || |||| |||| ||||||||||||| |||||||||||||    
T  14202702 aagagaggaaaacttgggaaatcaaatgaggtaactttatggttgaggg-tctttgattagag-ttctcttgggttg 14202628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 349
Target Start/End: Original strand, 29867742 - 29867816
Alignment:
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||| || ||||||||   |||||| | ||||| |||| ||||||||||||| |||||||||||||    
T  29867742 aagagagagaaactttgggaatcaaagaaggtaactattgggttgaggg-tctttgattagag-ttctcttgggttg 29867816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 4308 - 3924
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    ||||||||||||||||||||||||||||||||||  || ||||||||  |||||||||| |||||||||| ||||  | |||| ||||||||||||||||    
T  4308 ttgagattgtcttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattttaggtgccgtgagctagggttgcag 4209  T
Q  99 gg-tgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtac 197  Q
    || ||||||| ||||||||||||  || ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| | |||||||  | ||    
T  4208 gggtgcaaat-cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggac 4110  T
Q  198 gcaaatcgt--------------------gacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggg-----gagtggg 272  Q
    |||||||||                    ||||||||||   ||||||||| ||||||  ||| |||||| ||||||  ||||||| |     |||| ||    
T  4109 gcaaatcgtgacacaattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcctgtgcagatttgaagtgagagagagttgg 4011  T
Q  273 aagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttgaaaacatgggaaa 362  Q
    ||||||||||  ||||||||||||||||| | | |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  4010 aagagagaga--cttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttgaaaacatgggaaa 3924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 111; Significance: 6e-56; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 12 - 343
Target Start/End: Original strand, 21953 - 22286
Alignment:
Q  12 ttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaatt 108  Q
    |||||||||||||||||||||||  |  |||||| || | || ||||| |||||||||| |||||| | |||| ||||||||  |||||||  || || |    
T  21953 ttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagctagt-ttgcaggacgccaaat 22051  T
Q  109 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacgca--aatcgt 206  Q
    |||| |||||| | || ||||||||||||||| || |||||| |||||||||||||  |||||||||| |||| ||||||| |  ||||| |  ||||||    
T  22052 cgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtcgtaccttgtgacgtacgtaccaatcgt 22151  T
Q  207 gacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggagtgggaagagagagaaacttgggaaatcaaagggagtaa 306  Q
    |||||||||   |||| ||||||||||||| ||| |||||||||||||  |||||||| |||   |||||||||||||||||||||||||||||||| ||    
T  22152 gacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagatttgaaggtgagctagaagagagagaaacttgggaaatcaaagggagcaa 22250  T
Q  307 ctctagggtttagggttctttgattagagcttctctt 343  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  22251 ctctagggtttaggg-tctttgattagagtttctctt 22286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 11 - 254
Target Start/End: Original strand, 17444 - 17690
Alignment:
Q  11 cttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    ||||||||||||||||||||||||  |  ||||||||| |||| ||||| |||||||||| |||||| |||||| |||||| || ||||||||||| ||     
T  17444 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagct-ggtttgcagggtgccaaa 17542  T
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggttgtacg--caaatcg 205  Q
    ||||| |||||| | || ||||||||||| |||  | |||||| |||||||||||||||||||||||| ||||| ||||||| |  |||||  | |||||    
T  17543 tcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtcgtaccttgtgacgtacgttccaatcg 17642  T
Q  206 tgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgca 254  Q
    ||||||||||   |||| ||||||||||||| | |||||||||||||||    
T  17643 tgacacgattttatcagtggaaggctagtat-ttaagtgttcttgtgca 17690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 943 - 760
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatgccatgagctagggttgcag 98  Q
    |||| |||| ||||||||||||||| ||||||||  |  ||||||||| |||||||||| |||||||||| |||   | |||| ||||| | | |||| |    
T  943 ttgaaattggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattggaggtgccgtgagccaagtttgctg 844  T
Q  99 ggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    | |||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  843 gatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 272 - 363
Target Start/End: Original strand, 434405 - 434495
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggtt-gaaaacatgggaaat 363  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||| |||||||||| ||||    
T  434405 gaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagag-ttctcttgggttggaaaacatggtaaat 434495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 349
Target Start/End: Original strand, 789 - 864
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||| ||||||||||||| |||||||||||||    
T  789 gaagagagagaaacttgggaaatcaaaggcagcaactttagggtttaggg-tctttgattagag-ttctcttgggttg 864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 189
Target Start/End: Original strand, 524 - 675
Alignment:
Q  38 aaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaattcgtggcacgatttgggaaaatcgtgaca 136  Q
    ||||||||| |||| ||||| |||||||||| |||||| |||||| ||||||||  ||||||||||| || ||||| |||||| | |   ||||||||||    
T  524 aaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagctagt-ttgcagggtgccaaatcgtgacacgatcttgaggaatcgtgaca 622  T
Q  137 cgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttg 189  Q
    ||||  | ||| || |||||||||| |||  |||| ||||||||| |||||||    
T  623 cgattttcaaatttgctcgttaagtttccaggatagggactggtcgtaccttg 675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 3339 - 3522
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaagaa--ggaaaatcgtgaaacgattttgggatcgtgacacaatttcggatg-ccatgagctagggttgca 97  Q
    |||| |||| ||||||||||||||||||||||||  |  ||||||||| |||||||||  |||||||||| |||||   || || ||||||||  ||| |    
T  3339 ttgatattggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggccgtgagctagt-ttgaa 3437  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||| ||||    
T  3438 ggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtca 3522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 3560 - 3613
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgc 253  Q
    |||||||||||||||| |||||| ||||| ||||||||||  || |||||||||    
T  3560 aaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgc 3613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 8181 - 8098
Alignment:
Q  108 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggt 192  Q
    |||||||||||| | ||||||||||||||||||   ||||||| |||||||||||||  ||||||||||| |||| |||||||||    
T  8181 tcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggt 8098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 34556 - 34748
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttc-ggatgccatgagctagggttgca 97  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| |||||||||| |||||  |  ||| | || |  | |||||    
T  34556 ttgatattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggccgttag-tttgtttgca 34654  T
Q  98 gggtgcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttgggt 192  Q
     |  || || |||||||||||| | || |||||||||||||||   ||||||| |||||||||||||  ||||||||||| ||| ||||||||||    
T  34655 tgacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggt 34748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 20711 - 20636
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattagagcttctcttgggttg 349  Q
    |||||||||||||||| ||||||||||||  |||||| ||||||| |||| ||||||||||||| || ||||||||||    
T  20711 gaagagagagaaactttggaaatcaaaggaggtaactttagggttgaggg-tctttgattagag-ttatcttgggttg 20636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 1962 - 2026
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||||||||||| |||||| | | | |||||||||||||||||||||||| | ||||||||    
T  1962 aaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatttgaagg 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 1844 - 1932
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||| ||  |||||||||||||||| ||||||||    
T  1844 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-accttggg 1932  T

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Target: scaffold0197 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 13889 - 13969
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  13889 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 13969  T

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Target: scaffold0197; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 183
Target Start/End: Original strand, 18769 - 18850
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcat 183  Q
    ||||| ||||| |||||| | || |||||||||||||||   ||||||| || ||||||||||  |||||| ||||||||||    
T  18769 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcat 18850  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 148667 - 148731
Alignment:
Q  200 aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaagg 264  Q
    |||||||||||||||| |||||| | | | |||||||||||||||||||||||| | ||||||||    
T  148667 aaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatttgaagg 148731  T

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Target: scaffold0028; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 148549 - 148637
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtcataccttggg 191  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||| ||  |||||||||||||||| ||||||||    
T  148549 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-accttggg 148637  T

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Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 102 - 182
Target Start/End: Original strand, 176555 - 176635
Alignment:
Q  102 gcaaattcgtggcacgatttgggaaaatcgtgacacgatcgtgaaactttctcgttaagtatccttgataaggactggtca 182  Q
    ||||| |||||||||||| | || |||||||||||||||   ||||||| || ||||||||||  ||||||||||||||||    
T  176555 gcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca 176635  T

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Target: scaffold1455 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1711 - 1780
Alignment:
Q  1 ttgagattgtcttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacac 68  Q
    |||| |||| |||||||||||||||||||||||  ||  ||||||||| |||||||||| ||||||||||    
T  1711 ttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacac 1780  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 333
Target Start/End: Original strand, 114462 - 114522
Alignment:
Q  272 gaagagagagaaacttgggaaatcaaagggagtaactctagggtttagggttctttgattag 333  Q
    ||||||||||||||||| |||||||||||  |||||| ||||||| |||| |||||||||||    
T  114462 gaagagagagaaacttgagaaatcaaaggaggtaactttagggttgaggg-tctttgattag 114522  T

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Target: scaffold0140 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 121
Target Start/End: Original strand, 7924 - 8036
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaatttcg-gatgccatgagctagggttgcagggtgcaaat 107  Q
    |||||||||||||||||| ||||  ||  ||||||||| |||| ||||| |||||||||| |||| | |||||| |||| | || ||||||||||| ||     
T  7924 cttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ttggtttgcagggtgccaaa 8022  T
Q  108 tcgtggcacgattt 121  Q
    ||||| ||||||||    
T  8023 tcgtgacacgattt 8036  T

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Target: scaffold0510 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 1096 - 1160
Alignment:
Q  11 cttcaaatttgtggtctggaaga--aggaaaatcgtgaaacgattttgggatcgtgacacaattt 73  Q
    ||||||||||||||| || ||||  || |||||||||| |||||||||| |||||||||| ||||    
T  1096 cttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattt 1160  T

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