View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19176_high_24 (Length: 264)
Name: NF19176_high_24
Description: NF19176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19176_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 13 - 259
Target Start/End: Original strand, 386288 - 386533
Alignment:
| Q |
13 |
aatatatcttgtaaatgagtttcatacgtgttctttcaacatttctagttagagcattatctcgttgaaagtcaaaatgtatcaaagaagccacaaatta |
112 |
Q |
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| T |
386288 |
aatatatcttgtaaatgagtttcatacgtgttctttcaacatttctagttagagcattatctcgttgaaagtcaaaatgtatcaaagaagccacaaatta |
386387 |
T |
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| Q |
113 |
tcatctaaggtaactactatcctcgctcgaagtattcaaataatcaaaacttggaaaaagttccaccttgaagatttctcaagaagattcaacaacaaca |
212 |
Q |
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| T |
386388 |
tcatctaaggttactactatcctcgctcgaagtattcaaataatcaaaacttgtaaaaagttcca-cttgaagatttctcaagaagattcaacaacaata |
386486 |
T |
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| Q |
213 |
attatctgtccaaaagtgtcaaagattcaaattaaaaagaaagccgt |
259 |
Q |
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| T |
386487 |
attatctgtccaaaagtgtcaaagattcaaattaaaaagaaagccgt |
386533 |
T |
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