View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19176_high_31 (Length: 249)
Name: NF19176_high_31
Description: NF19176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19176_high_31 |
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Alignment Details
Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 49694390 - 49694159
Alignment:
| Q |
1 |
gataatactacaacgattcaaagtattgcaactaatggaggtcaaagtgatgctgcttctcatcaagaatgcgagagtgagaaactggtaagcgtatctt |
100 |
Q |
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| T |
49694390 |
gataatactacaacgattcaaagtattgcaactaatggaggtcaaagtgatgttgcttctcatcaagaatgcgagagtgagaaactggtaagcgtaactg |
49694291 |
T |
|
| Q |
101 |
actatgtagatgactcaaaagatatgttgcatgattcttctgttggttttgaatccaatgatggtgtttctgaaggtaatgaaattcagggtgttgagta |
200 |
Q |
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| T |
49694290 |
attatgtagacgactcaaaagatatgttgcatgattcttctgttggttttgaatccaatgatggtgtttctgaaggtaatgaaattcagggtgttgagta |
49694191 |
T |
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| Q |
201 |
ttctgaactttctgatcctgcactctttgaag |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
49694190 |
ttctgaactttctgatcctgcactctttgaag |
49694159 |
T |
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