View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19176_low_17 (Length: 368)

Name: NF19176_low_17
Description: NF19176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19176_low_17
NF19176_low_17
[»] chr4 (52 HSPs)
chr4 (14-365)||(12711507-12711862)
chr4 (242-308)||(16408710-16408776)
chr4 (242-310)||(20224946-20225014)
chr4 (242-308)||(5648221-5648287)
chr4 (242-308)||(21646926-21646992)
chr4 (242-308)||(48598930-48598996)
chr4 (256-310)||(487240-487294)
chr4 (242-308)||(5306770-5306836)
chr4 (242-308)||(6430732-6430798)
chr4 (255-308)||(11054253-11054306)
chr4 (255-304)||(13256508-13256557)
chr4 (255-308)||(40915804-40915857)
chr4 (255-308)||(47528635-47528688)
chr4 (255-311)||(19027823-19027879)
chr4 (242-308)||(55766572-55766639)
chr4 (242-308)||(5313101-5313167)
chr4 (242-308)||(14590799-14590865)
chr4 (242-308)||(16911524-16911590)
chr4 (256-310)||(17315403-17315457)
chr4 (242-308)||(30639342-30639408)
chr4 (256-310)||(42164253-42164307)
chr4 (256-310)||(43035224-43035278)
chr4 (335-368)||(5306719-5306752)
chr4 (335-368)||(7909336-7909369)
chr4 (242-283)||(20405055-20405096)
chr4 (242-299)||(23501755-23501812)
chr4 (255-308)||(44363239-44363292)
chr4 (242-310)||(10660366-10660434)
chr4 (242-310)||(10874511-10874579)
chr4 (266-310)||(25463108-25463152)
chr4 (256-308)||(35567146-35567198)
chr4 (255-310)||(37494826-37494881)
chr4 (261-308)||(39077901-39077948)
chr4 (263-310)||(41018898-41018945)
chr4 (335-368)||(5648305-5648338)
chr4 (335-368)||(6430681-6430714)
chr4 (263-308)||(7385583-7385628)
chr4 (255-308)||(8473727-8473780)
chr4 (335-368)||(9832368-9832401)
chr4 (335-368)||(17043449-17043482)
chr4 (335-368)||(20225029-20225062)
chr4 (335-368)||(29207953-29207986)
chr4 (335-368)||(47444004-47444037)
chr4 (335-368)||(47528585-47528618)
chr4 (335-368)||(48598880-48598913)
chr4 (259-308)||(49938697-49938746)
chr4 (260-308)||(17043501-17043549)
chr4 (335-367)||(30639426-30639458)
chr4 (258-306)||(30690292-30690340)
chr4 (258-310)||(32478890-32478942)
chr4 (335-367)||(39077852-39077884)
chr4 (256-308)||(54730225-54730277)
[»] chr8 (41 HSPs)
chr8 (242-308)||(36720758-36720824)
chr8 (242-310)||(7136634-7136702)
chr8 (255-308)||(28407391-28407444)
chr8 (255-308)||(28817733-28817786)
chr8 (242-308)||(12670355-12670421)
chr8 (242-308)||(20284180-20284246)
chr8 (242-308)||(20869603-20869669)
chr8 (242-308)||(21070809-21070875)
chr8 (242-308)||(30454202-30454268)
chr8 (242-308)||(35261641-35261707)
chr8 (255-307)||(24245426-24245478)
chr8 (249-308)||(26954101-26954160)
chr8 (242-308)||(2626481-2626547)
chr8 (258-308)||(29521792-29521842)
chr8 (242-308)||(39461103-39461169)
chr8 (256-310)||(44781611-44781665)
chr8 (255-308)||(6760797-6760850)
chr8 (255-308)||(13160677-13160730)
chr8 (255-308)||(17823551-17823604)
chr8 (255-308)||(25250497-25250550)
chr8 (260-308)||(18164866-18164914)
chr8 (242-310)||(44530111-44530179)
chr8 (255-310)||(8897869-8897924)
chr8 (255-309)||(40605011-40605065)
chr8 (335-368)||(35261726-35261759)
chr8 (255-308)||(45071240-45071293)
chr8 (256-308)||(42083806-42083858)
chr8 (255-310)||(12625864-12625919)
chr8 (259-310)||(35105902-35105953)
chr8 (256-310)||(22598133-22598187)
chr8 (334-364)||(28873244-28873274)
chr8 (335-364)||(389692-389721)
chr8 (335-368)||(5689678-5689711)
chr8 (335-368)||(12670305-12670338)
chr8 (335-368)||(13160748-13160781)
chr8 (335-368)||(29521740-29521773)
chr8 (335-368)||(29877141-29877174)
chr8 (335-368)||(36720843-36720876)
chr8 (335-368)||(44530196-44530229)
chr8 (335-368)||(45071311-45071344)
chr8 (262-310)||(31457155-31457203)
[»] chr7 (53 HSPs)
chr7 (242-308)||(42805486-42805552)
chr7 (242-310)||(46354156-46354224)
chr7 (242-308)||(35334921-35334987)
chr7 (242-308)||(42798631-42798697)
chr7 (242-308)||(43557434-43557500)
chr7 (242-308)||(47077960-47078026)
chr7 (255-308)||(7794613-7794666)
chr7 (242-310)||(7193047-7193115)
chr7 (242-306)||(22699079-22699143)
chr7 (242-308)||(2541126-2541193)
chr7 (257-308)||(10693178-10693229)
chr7 (255-310)||(11617693-11617748)
chr7 (255-310)||(33872014-33872069)
chr7 (242-308)||(5180264-5180330)
chr7 (242-308)||(14732929-14732995)
chr7 (242-308)||(18326996-18327062)
chr7 (242-308)||(21172114-21172180)
chr7 (242-308)||(32758223-32758289)
chr7 (242-308)||(42495942-42496008)
chr7 (255-308)||(19426996-19427049)
chr7 (259-308)||(47716438-47716487)
chr7 (242-310)||(48735225-48735294)
chr7 (255-306)||(13805077-13805128)
chr7 (241-308)||(27629595-27629662)
chr7 (334-368)||(8149000-8149034)
chr7 (256-306)||(14099115-14099165)
chr7 (256-306)||(14409132-14409182)
chr7 (262-308)||(42391205-42391251)
chr7 (255-308)||(1424017-1424070)
chr7 (259-308)||(11741774-11741823)
chr7 (260-308)||(28078238-28078286)
chr7 (256-308)||(40463853-40463905)
chr7 (256-308)||(42101992-42102044)
chr7 (256-308)||(44123728-44123780)
chr7 (256-308)||(48123591-48123643)
chr7 (253-308)||(7644929-7644984)
chr7 (249-308)||(42476842-42476901)
chr7 (334-368)||(2662990-2663024)
chr7 (334-368)||(11741839-11741873)
chr7 (256-310)||(12473280-12473334)
chr7 (256-302)||(19266426-19266472)
chr7 (242-296)||(25198684-25198738)
chr7 (257-310)||(6736867-6736920)
chr7 (335-368)||(10693128-10693161)
chr7 (335-368)||(19265861-19265894)
chr7 (335-368)||(21172064-21172097)
chr7 (335-368)||(27629681-27629714)
chr7 (271-308)||(38262303-38262340)
chr7 (335-368)||(42391155-42391188)
chr7 (256-304)||(19265791-19265839)
chr7 (337-365)||(35787327-35787355)
chr7 (335-367)||(38604573-38604605)
chr7 (255-307)||(39123865-39123917)
[»] chr3 (42 HSPs)
chr3 (242-310)||(40272917-40272985)
chr3 (242-308)||(13730711-13730777)
chr3 (242-308)||(52926317-52926383)
chr3 (242-308)||(8247796-8247862)
chr3 (242-308)||(10870058-10870124)
chr3 (242-308)||(29366829-29366895)
chr3 (255-302)||(4495777-4495824)
chr3 (259-310)||(5173825-5173876)
chr3 (242-308)||(7696992-7697058)
chr3 (242-308)||(46421144-46421210)
chr3 (259-308)||(13628899-13628948)
chr3 (255-308)||(26869704-26869757)
chr3 (256-308)||(26573125-26573177)
chr3 (256-308)||(53062036-53062088)
chr3 (261-308)||(7942993-7943040)
chr3 (257-308)||(9607202-9607253)
chr3 (257-308)||(34420751-34420802)
chr3 (242-308)||(1217074-1217140)
chr3 (242-308)||(16735425-16735491)
chr3 (257-307)||(25944468-25944518)
chr3 (255-308)||(22123022-22123075)
chr3 (335-368)||(39203583-39203616)
chr3 (269-310)||(54032664-54032705)
chr3 (256-308)||(22609764-22609816)
chr3 (260-308)||(30928254-30928302)
chr3 (256-308)||(45620936-45620988)
chr3 (257-308)||(39203515-39203566)
chr3 (266-308)||(516417-516459)
chr3 (242-308)||(6411928-6411994)
chr3 (335-368)||(4495719-4495752)
chr3 (335-368)||(9276333-9276366)
chr3 (335-368)||(15797289-15797322)
chr3 (335-368)||(16735509-16735542)
chr3 (242-279)||(21875004-21875041)
chr3 (335-368)||(22122972-22123005)
chr3 (335-368)||(22609834-22609867)
chr3 (242-283)||(25517305-25517346)
chr3 (335-368)||(26869775-26869808)
chr3 (335-368)||(31592916-31592949)
chr3 (335-368)||(34771419-34771452)
chr3 (335-368)||(40272867-40272900)
chr3 (335-368)||(47624110-47624143)
[»] chr5 (27 HSPs)
chr5 (242-309)||(22600416-22600483)
chr5 (256-310)||(23974756-23974810)
chr5 (242-308)||(24448852-24448918)
chr5 (242-308)||(41014281-41014347)
chr5 (242-306)||(4619215-4619279)
chr5 (242-308)||(27328714-27328780)
chr5 (242-308)||(38879543-38879609)
chr5 (242-308)||(43334164-43334230)
chr5 (255-308)||(37024661-37024714)
chr5 (242-310)||(1565393-1565461)
chr5 (242-308)||(8170089-8170155)
chr5 (242-308)||(35710275-35710341)
chr5 (263-310)||(1405170-1405217)
chr5 (335-367)||(7097816-7097848)
chr5 (260-310)||(10634251-10634301)
chr5 (334-368)||(24448936-24448970)
chr5 (256-306)||(39079875-39079925)
chr5 (256-310)||(39301099-39301153)
chr5 (335-368)||(2838825-2838858)
chr5 (335-368)||(8170039-8170072)
chr5 (255-296)||(31362454-31362495)
chr5 (267-308)||(32703411-32703452)
chr5 (335-368)||(32703469-32703502)
chr5 (335-368)||(34154869-34154902)
chr5 (335-368)||(41014365-41014398)
chr5 (335-367)||(16880703-16880735)
chr5 (256-308)||(28516541-28516593)
[»] chr1 (52 HSPs)
chr1 (255-310)||(46991802-46991857)
chr1 (255-308)||(20004199-20004252)
chr1 (255-306)||(6925098-6925149)
chr1 (249-308)||(27201639-27201698)
chr1 (255-309)||(20036218-20036272)
chr1 (242-308)||(22930174-22930240)
chr1 (242-308)||(34725203-34725269)
chr1 (255-308)||(47214509-47214562)
chr1 (256-308)||(18724652-18724704)
chr1 (256-310)||(2435998-2436052)
chr1 (242-308)||(30395835-30395901)
chr1 (242-308)||(32632663-32632729)
chr1 (257-310)||(25468368-25468421)
chr1 (256-308)||(2435894-2435946)
chr1 (256-308)||(14617037-14617089)
chr1 (242-306)||(19414424-19414488)
chr1 (259-310)||(9939463-9939514)
chr1 (259-310)||(22327101-22327152)
chr1 (242-308)||(18944628-18944694)
chr1 (334-368)||(21910704-21910738)
chr1 (242-308)||(23768427-23768493)
chr1 (242-308)||(34714608-34714674)
chr1 (256-306)||(35117877-35117927)
chr1 (242-308)||(41319913-41319979)
chr1 (242-308)||(45402080-45402145)
chr1 (255-308)||(4430133-4430186)
chr1 (255-308)||(6983916-6983969)
chr1 (255-308)||(27474279-27474332)
chr1 (255-308)||(46248060-46248113)
chr1 (335-368)||(47214579-47214612)
chr1 (255-303)||(8197041-8197089)
chr1 (242-298)||(19932869-19932925)
chr1 (256-308)||(25290162-25290214)
chr1 (337-368)||(14617110-14617141)
chr1 (335-366)||(25468320-25468351)
chr1 (257-308)||(38478387-38478438)
chr1 (242-301)||(40424727-40424786)
chr1 (256-306)||(10378834-10378884)
chr1 (242-296)||(18742080-18742134)
chr1 (258-308)||(45812642-45812692)
chr1 (335-368)||(4349708-4349741)
chr1 (335-368)||(10378790-10378823)
chr1 (335-368)||(23768375-23768408)
chr1 (338-367)||(23796538-23796567)
chr1 (335-368)||(32632612-32632645)
chr1 (335-368)||(35253242-35253275)
chr1 (335-368)||(38478337-38478370)
chr1 (257-310)||(44485214-44485267)
chr1 (256-308)||(17470453-17470505)
chr1 (256-308)||(33222983-33223035)
chr1 (256-308)||(50760333-50760385)
chr1 (256-308)||(52910216-52910268)
[»] scaffold0187 (2 HSPs)
scaffold0187 (242-308)||(10155-10221)
scaffold0187 (242-308)||(20483-20549)
[»] chr2 (44 HSPs)
chr2 (242-308)||(8455423-8455489)
chr2 (255-306)||(17667977-17668028)
chr2 (255-310)||(40416976-40417031)
chr2 (242-308)||(11514398-11514464)
chr2 (242-308)||(12024025-12024091)
chr2 (242-308)||(14530280-14530346)
chr2 (255-308)||(22371032-22371085)
chr2 (255-308)||(23397741-23397794)
chr2 (255-307)||(17705470-17705522)
chr2 (242-310)||(25079823-25079891)
chr2 (258-310)||(44604832-44604884)
chr2 (255-310)||(17623539-17623594)
chr2 (255-310)||(39914411-39914466)
chr2 (258-308)||(5841006-5841056)
chr2 (242-308)||(24200732-24200798)
chr2 (242-308)||(25249844-25249910)
chr2 (255-308)||(7214509-7214562)
chr2 (258-307)||(10543676-10543725)
chr2 (258-310)||(5450263-5450315)
chr2 (242-310)||(17896221-17896289)
chr2 (242-304)||(21779370-21779432)
chr2 (334-368)||(30826082-30826116)
chr2 (335-368)||(21779316-21779349)
chr2 (257-308)||(99370-99421)
chr2 (255-310)||(24860091-24860146)
chr2 (265-308)||(25641487-25641530)
chr2 (257-308)||(45235925-45235976)
chr2 (260-310)||(17380341-17380391)
chr2 (334-368)||(19977769-19977803)
chr2 (242-308)||(19977821-19977887)
chr2 (242-300)||(27573583-27573641)
chr2 (256-310)||(29419994-29420048)
chr2 (256-310)||(33795261-33795315)
chr2 (335-368)||(8455371-8455404)
chr2 (256-308)||(9671156-9671209)
chr2 (335-368)||(9671226-9671259)
chr2 (335-368)||(10546210-10546243)
chr2 (335-368)||(12023974-12024007)
chr2 (271-308)||(14444720-14444757)
chr2 (335-368)||(17623611-17623644)
chr2 (335-368)||(17668049-17668082)
chr2 (335-368)||(22371101-22371134)
chr2 (335-368)||(25249793-25249826)
chr2 (335-368)||(36871539-36871572)
[»] scaffold1176 (1 HSPs)
scaffold1176 (242-310)||(1690-1758)
[»] chr6 (15 HSPs)
chr6 (242-308)||(1346926-1346992)
chr6 (256-308)||(14975187-14975239)
chr6 (242-308)||(1354862-1354928)
chr6 (242-308)||(3815184-3815250)
chr6 (242-308)||(9161085-9161151)
chr6 (257-310)||(2166517-2166570)
chr6 (257-310)||(2178150-2178203)
chr6 (255-308)||(12222024-12222077)
chr6 (242-307)||(8409205-8409270)
chr6 (263-308)||(29355964-29356009)
chr6 (245-308)||(6024198-6024261)
chr6 (256-307)||(13905087-13905138)
chr6 (335-368)||(1347009-1347042)
chr6 (335-368)||(1354812-1354845)
chr6 (255-308)||(15866144-15866197)
[»] scaffold0057 (2 HSPs)
scaffold0057 (255-368)||(46806-46911)
scaffold0057 (242-299)||(24883-24940)
[»] scaffold0168 (1 HSPs)
scaffold0168 (242-308)||(30541-30607)
[»] scaffold0254 (1 HSPs)
scaffold0254 (257-310)||(4134-4187)
[»] scaffold0258 (1 HSPs)
scaffold0258 (256-308)||(13130-13182)
[»] scaffold0024 (1 HSPs)
scaffold0024 (257-309)||(83852-83904)
[»] scaffold0311 (1 HSPs)
scaffold0311 (255-310)||(10785-10840)
[»] scaffold0116 (1 HSPs)
scaffold0116 (255-310)||(8866-8921)
[»] scaffold0194 (1 HSPs)
scaffold0194 (258-308)||(24642-24692)
[»] scaffold0005 (1 HSPs)
scaffold0005 (242-308)||(226513-226579)
[»] scaffold0049 (1 HSPs)
scaffold0049 (255-308)||(58952-59005)
[»] scaffold0223 (1 HSPs)
scaffold0223 (242-308)||(11094-11159)
[»] scaffold0036 (1 HSPs)
scaffold0036 (335-368)||(35072-35105)
[»] scaffold0015 (1 HSPs)
scaffold0015 (335-368)||(48689-48722)
[»] scaffold0180 (1 HSPs)
scaffold0180 (336-368)||(24188-24220)


Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 14 - 365
Target Start/End: Complemental strand, 12711862 - 12711507
Alignment:
Q  14 tactccaaaagaagaatcatactcaacttggacaaaggtttattgcctctaattgggcatgttggtcctactcacataaatgtcactcttttttgttcga 113  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12711862 tactccaaaagaagaatcatactcaacttggacaaagatttattgctcctaattgggcatgttggtcctactcacataaatgtcactcttttttgttcga 12711763  T
Q  114 attgagacgaactacaaaccccactggtcccaat-ttttggaacgaagcttaattagttcatgcatatagtacgtgaaaaatcacatccttttaacgaat 212  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12711762 attgagacgaactacaaaccccaccggtcccaattttttggaacgaagcttaattagttcatgcatatagtacgtgaaaaatcacatccttttaccgaat 12711663  T
Q  213 ggcacctttggtcctaaaataattcagaga-ccttgacgtaagtggtaaa---gttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| |||||||||||||||||  || | ||||  |||||||||||||   ||||||||||||||| |||||||| |   ||||||||||| ||||||    
T  12711662 ggcacc-ttggtcctaaaataattttgaaaccctttgcgtaagtggtaaagttgttgttgtcatgtgattggaagattacatgttcaagtcctagaaaca 12711564  T
Q  309 acaaacaacatcttgtgtnnnnnnntagggtaaggttgcgtacaatacaccaaatgg 365  Q
    ||||||||||||||||||       |||||||||  |||||||||||||||||||||    
T  12711563 acaaacaacatcttgtgtaaaaaaatagggtaagactgcgtacaatacaccaaatgg 12711507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 16408776 - 16408710
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  16408776 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 16408710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 20224946 - 20225014
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  20224946 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaac 20225014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 5648221 - 5648287
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  5648221 accttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaaca 5648287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 21646926 - 21646992
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| |||  |||||||||||||||||||    
T  21646926 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaaca 21646992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 48598996 - 48598930
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  48598996 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 48598930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 487294 - 487240
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  487294 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaac 487240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 5306836 - 5306770
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||    
T  5306836 accttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 5306770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 6430798 - 6430732
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||    
T  6430798 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaaca 6430732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 11054306 - 11054253
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||    
T  11054306 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaaca 11054253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Complemental strand, 13256557 - 13256508
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctgga 304  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||||||    
T  13256557 tggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcctgga 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 40915804 - 40915857
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||    
T  40915804 tggtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaaca 40915857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 47528688 - 47528635
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  47528688 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaaca 47528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 255 - 311
Target Start/End: Original strand, 19027823 - 19027879
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaaca 311  Q
    ||||| ||||||||||| ||||||| ||| ||| |||||||||||||||||||||||    
T  19027823 tggtagagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaaca 19027879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 55766639 - 55766572
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatca-ggggttcaagtcctggaaaca 308  Q
    ||||||||| || ||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||    
T  55766639 accttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaaca 55766572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 5313167 - 5313101
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| ||||| |||||||||||||||||||||| || ||| ||| |||||||| ||||| |||||    
T  5313167 accttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaaca 5313101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 14590799 - 14590865
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| || |||||||||| ||||||    
T  14590799 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaaca 14590865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 16911524 - 16911590
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||  ||| ||| ||||||||||||| ||||||    
T  16911524 accttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaaca 16911590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 17315457 - 17315403
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||||||| ||| ||| |||||||| |||| ||||||||    
T  17315457 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaac 17315403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 30639342 - 30639408
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||| |||||||| ||| |||  |||||||||||||||||||    
T  30639342 accttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaaca 30639408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 42164307 - 42164253
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| ||||||||||||||||| ||| ||| ||||||||||| ||||||||||    
T  42164307 ggtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaac 42164253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 43035224 - 43035278
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||| |||||||||    
T  43035224 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaac 43035278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 5306752 - 5306719
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||||||||||||||||||||||||||||    
T  5306752 agggtaaggttgcgtacaatacaccaaatggtgg 5306719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 7909369 - 7909336
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||||||||||||||||||||||||||||    
T  7909369 agggtaaggttgcgtacaatacaccaaatggtgg 7909336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 20405055 - 20405096
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaag 283  Q
    ||||||||| || |||||||||||||||||||||||||||||    
T  20405055 accttgacgcaactggtaaagttgttgtcatgtgactggaag 20405096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 23501755 - 23501812
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtc 299  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| |||||||||||    
T  23501755 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc 23501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 44363292 - 44363239
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| ||| | |||||||||||| |||||    
T  44363292 tggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaaca 44363239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 10660366 - 10660434
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || ||||||||||||||||||||||||| ||| | |   ||||||||||||||||||||    
T  10660366 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaac 10660434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 10874511 - 10874579
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || ||||||||||||||||||||||||| ||| | |   ||||||||||||||||||||    
T  10874511 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaac 10874579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 25463108 - 25463152
Alignment:
Q  266 ttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaac 25463152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 35567146 - 35567198
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||||| ||||||||    
T  35567146 ggtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaaca 35567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 37494826 - 37494881
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||| |||| ||||| ||| |||  |||||||||||||||||||||    
T  37494826 tggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaac 37494881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 261 - 308
Target Start/End: Complemental strand, 39077948 - 39077901
Alignment:
Q  261 agttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||| || ||| ||| ||||||||||||||||||||    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaaca 39077901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 310
Target Start/End: Complemental strand, 41018945 - 41018898
Alignment:
Q  263 ttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaac 41018898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 5648305 - 5648338
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  5648305 agggtaaggctgcgtacaatacaccaaatggtgg 5648338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 6430714 - 6430681
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  6430714 agggtaaggctgcgtacaatacaccaaatggtgg 6430681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 7385628 - 7385583
Alignment:
Q  263 ttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||| ||| ||| ||||||||| ||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaaca 7385583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 8473780 - 8473727
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||| |||| ||||| |   ||||||||||||||||||||    
T  8473780 tggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaaca 8473727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 9832401 - 9832368
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  9832401 agggtaaggctgcgtacaatacaccaaatggtgg 9832368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 17043482 - 17043449
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  17043482 agggtaaggctgcgtacaatacaccaaatggtgg 17043449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 20225029 - 20225062
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  20225029 agggtaaggctgcgtacaatacaccaaatggtgg 20225062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 29207986 - 29207953
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  29207986 agggtaaggctgcgtacaatacaccaaatggtgg 29207953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 47444004 - 47444037
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  47444004 agggtaaggctgcgtacaatacaccaaatggtgg 47444037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 47528618 - 47528585
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  47528618 agggtaaggctgcgtacaatacaccaaatggtgg 47528585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 48598913 - 48598880
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  48598913 agggtaaggctgcgtacaatacaccaaatggtgg 48598880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 49938746 - 49938697
Alignment:
Q  259 aaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaaca 49938697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 17043549 - 17043501
Alignment:
Q  260 aagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaaca 17043501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 30639426 - 30639458
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtg 367  Q
    ||||||||| |||||||||||||||||||||||    
T  30639426 agggtaaggctgcgtacaatacaccaaatggtg 30639458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 306
Target Start/End: Complemental strand, 30690340 - 30690292
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    |||||| ||||||| ||||||| ||| ||| ||||||||||||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaa 30690292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 310
Target Start/End: Complemental strand, 32478942 - 32478890
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||| |  || |||  |||||||||||||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaac 32478890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 39077884 - 39077852
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtg 367  Q
    ||||||||||||||||||||| |||||||||||    
T  39077884 agggtaaggttgcgtacaatataccaaatggtg 39077852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 54730225 - 54730277
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||   ||| ||| ||||||||||||| ||||||    
T  54730225 ggtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaaca 54730277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 4e-20; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 36720758 - 36720824
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  36720758 accttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 36720824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 7136702 - 7136634
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  7136702 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaac 7136634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 28407391 - 28407444
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28407391 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 28407444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 28817786 - 28817733
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28817786 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 28817733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 12670421 - 12670355
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  12670421 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 12670355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 20284246 - 20284180
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| ||  |||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  20284246 accttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 20284180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 20869669 - 20869603
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  20869669 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 20869603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 21070875 - 21070809
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| ||  |||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  21070875 accttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 21070809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 30454268 - 30454202
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  30454268 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 30454202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 35261641 - 35261707
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  35261641 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaaca 35261707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 24245426 - 24245478
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaac 307  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  24245426 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 26954101 - 26954160
Alignment:
Q  249 cgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||| |||||||||||||||||||||| | |||| ||| ||||||||||||||||||||    
T  26954101 cgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaaca 26954160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 2626481 - 2626547
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||    
T  2626481 accttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaaca 2626547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 29521842 - 29521792
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  29521842 taaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaaca 29521792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 39461169 - 39461103
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||| ||||| ||| ||| ||||||||||||||||||||    
T  39461169 accttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaaca 39461103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 44781665 - 44781611
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  44781665 ggtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaac 44781611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 6760797 - 6760850
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||    
T  6760797 tggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaaca 6760850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 13160677 - 13160730
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||    
T  13160677 tggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 13160730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 17823551 - 17823604
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||    
T  17823551 tggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaaca 17823604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 25250497 - 25250550
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||||||| |||   ||||||||||||||||||    
T  25250497 tggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaaca 25250550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 18164914 - 18164866
Alignment:
Q  260 aagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  18164914 aagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 18164866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 44530111 - 44530179
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || ||||||||||| |||||||||||| |||| ||| ||||||||||| ||||||||||    
T  44530111 accttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaac 44530179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 8897924 - 8897869
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||||| | ||| ||| ||||| ||||||||||||||||    
T  8897924 tggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaac 8897869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 309
Target Start/End: Complemental strand, 40605065 - 40605011
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaa 309  Q
    |||||||||||||||||||||| |||| ||| | ||||||||||| |||||||||    
T  40605065 tggtaaagttgttgtcatgtgattggatgattatgggttcaagtcatggaaacaa 40605011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 35261726 - 35261759
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||||||||||||||||||||||||||||    
T  35261726 agggtaaggttgcgtacaatacaccaaatggtgg 35261759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 45071240 - 45071293
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||| || ||| ||| |||||||||| |||||||||    
T  45071240 tggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaaca 45071293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 42083858 - 42083806
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| ||||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  42083858 ggtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 42083806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 12625864 - 12625919
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||| ||||||| | || ||| ||| ||||||||||||||||||    
T  12625864 tggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaac 12625919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 35105902 - 35105953
Alignment:
Q  259 aaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||| ||| ||| ||| ||| ||||||||||||||||||||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaac 35105953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 22598133 - 22598187
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||  |||||| ||| ||| |||||||| |||||||||||||    
T  22598133 ggtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaac 22598187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 364
Target Start/End: Original strand, 28873244 - 28873274
Alignment:
Q  334 tagggtaaggttgcgtacaatacaccaaatg 364  Q
    |||||||||||||||||||||||||||||||    
T  28873244 tagggtaaggttgcgtacaatacaccaaatg 28873274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 364
Target Start/End: Original strand, 389692 - 389721
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatg 364  Q
    ||||||||||||||||||||||||||||||    
T  389692 agggtaaggttgcgtacaatacaccaaatg 389721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 5689678 - 5689711
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  5689678 agggtaaggctgcgtacaatacaccaaatggtgg 5689711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 12670338 - 12670305
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  12670338 agggtaaggctgcgtacaatacaccaaatggtgg 12670305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 13160748 - 13160781
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  13160748 agggtaaggctgcgtacaatacaccaaatggtgg 13160781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 29521773 - 29521740
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  29521773 agggtaaggctgcgtacaatacaccaaatggtgg 29521740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 29877141 - 29877174
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  29877141 agggtaaggctgcgtacaatacaccaaatggtgg 29877174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 36720843 - 36720876
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  36720843 agggtaaggctgcgtacaatacaccaaatggtgg 36720876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 44530196 - 44530229
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  44530196 agggtaaggctgcgtacaatacaccaaatggtgg 44530229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 45071311 - 45071344
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  45071311 agggtaaggctgcgtacaatacaccaaatggtgg 45071344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 262 - 310
Target Start/End: Original strand, 31457155 - 31457203
Alignment:
Q  262 gttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||| ||| ||| ||| |||||||||||||| |||||||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaac 31457203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 42805486 - 42805552
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  42805486 accttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 42805552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 46354156 - 46354224
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || |||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||    
T  46354156 accttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaac 46354224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 35334987 - 35334921
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  35334987 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaaca 35334921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 42798631 - 42798697
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  42798631 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaaca 42798697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 43557434 - 43557500
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  43557434 accttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 43557500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 47078026 - 47077960
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  47078026 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47077960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 7794666 - 7794613
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  7794666 tggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaaca 7794613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 7193047 - 7193115
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| ||||| | ||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||||    
T  7193047 accttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaac 7193115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 22699143 - 22699079
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    ||||||||| || ||||||||||||||||||||||||| ||| | | ||||||||||||||||||    
T  22699143 accttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaa 22699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 2541193 - 2541126
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactgg-aagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  2541193 accttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaaca 2541126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 10693229 - 10693178
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  10693229 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 10693178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 11617748 - 11617693
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||    
T  11617748 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaac 11617693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 33872069 - 33872014
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  33872069 tggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaac 33872014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 5180330 - 5180264
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| || ||||||||||||||||||||||||| ||| ||| |||||||| | |||||||||    
T  5180330 accttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaaca 5180264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 14732995 - 14732929
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  14732995 accttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaaca 14732929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 18326996 - 18327062
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||||||||||| |||| ||| |||||||||||| |||||||    
T  18326996 accttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaaca 18327062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 21172180 - 21172114
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||    
T  21172180 accttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaaca 21172114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 32758223 - 32758289
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  32758223 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaaca 32758289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 42496008 - 42495942
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||||| |||||| ||| ||| ||||||||||||||||||||    
T  42496008 accttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaaca 42495942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 19427049 - 19426996
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||    
T  19427049 tggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaaca 19426996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 47716438 - 47716487
Alignment:
Q  259 aaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||| |||||||||||||| ||| ||||||||||||||||||||    
T  47716438 aaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaaca 47716487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 48735294 - 48735225
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcc-tggaaacaac 310  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||    
T  48735294 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaac 48735225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 13805077 - 13805128
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    ||||||||||||||||||||||||| ||| | | ||||||||||||||||||    
T  13805077 tggtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaa 13805128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 27629595 - 27629662
Alignment:
Q  241 gaccttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||| || || |||||||||||||||||| |||| | ||| ||| ||||||||||||||||||||    
T  27629595 gaccttggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaaca 27629662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 334 - 368
Target Start/End: Complemental strand, 8149034 - 8149000
Alignment:
Q  334 tagggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||||||||||||||||||||||||||||||||||    
T  8149034 tagggtaaggttgcgtacaatacaccaaatggtgg 8149000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 14099165 - 14099115
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    |||||||||||||||||||||||| ||| ||| ||||| ||||||||||||    
T  14099165 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaa 14099115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 14409182 - 14409132
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    |||||||||||||||||||||||| ||| ||| ||||| ||||||||||||    
T  14409182 ggtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaa 14409132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 308
Target Start/End: Complemental strand, 42391251 - 42391205
Alignment:
Q  262 gttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 42391205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 1424070 - 1424017
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||| ||||||||||||| ||| || ||||| |||||||||||    
T  1424070 tggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaaca 1424017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 259 - 308
Target Start/End: Original strand, 11741774 - 11741823
Alignment:
Q  259 aaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||| |||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaaca 11741823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 28078286 - 28078238
Alignment:
Q  260 aagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||| ||| ||| ||||||||||||| ||||||    
T  28078286 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 28078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 40463853 - 40463905
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||| | ||||||    
T  40463853 ggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaaca 40463905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 42102044 - 42101992
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||| ||||||||||| |||   ||||||||||||||||||    
T  42102044 ggtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaaca 42101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 44123780 - 44123728
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||| ||||||||||||| ||||| | |||||||||| |||||||||    
T  44123780 ggtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaaca 44123728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 48123643 - 48123591
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||| ||||||| ||| ||| ||| ||||||||||||||||||||    
T  48123643 ggtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaaca 48123591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 253 - 308
Target Start/End: Original strand, 7644929 - 7644984
Alignment:
Q  253 agtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| ||||||| | ||||||| ||| ||| ||||||||||||||||||||    
T  7644929 agtggtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaaca 7644984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 42476842 - 42476901
Alignment:
Q  249 cgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||| ||||||||||||||||||||||||  ||| ||| || ||||||| |||||||||    
T  42476842 cgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaaca 42476901  T

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Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 368
Target Start/End: Complemental strand, 2663024 - 2662990
Alignment:
Q  334 tagggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||||||||| ||||||||||||||||||||||||    
T  2663024 tagggtaaggctgcgtacaatacaccaaatggtgg 2662990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 368
Target Start/End: Original strand, 11741839 - 11741873
Alignment:
Q  334 tagggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||||||||| ||||||||||||||||||||||||    
T  11741839 tagggtaaggctgcgtacaatacaccaaatggtgg 11741873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 12473280 - 12473334
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||  ||| ||| ||| |||||||||||||| |||||||    
T  12473280 ggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcctgcaaacaac 12473334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 302
Target Start/End: Original strand, 19266426 - 19266472
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctg 302  Q
    |||||||||||||||||||||||| ||| ||  ||||||||||||||    
T  19266426 ggtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctg 19266472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Original strand, 25198684 - 25198738
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaa 296  Q
    |||||| ||||| |||||||||||||||||| |||||| ||||||| ||| ||||    
T  25198684 accttggcgtaactggtaaagttgttgtcatatgactgaaagatcatgggatcaa 25198738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 6736867 - 6736920
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||| ||||| ||| ||| |||||||||||||  |||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaac 6736920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 10693161 - 10693128
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  10693161 agggtaaggctgcgtacaatacaccaaatggtgg 10693128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 19265861 - 19265894
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  19265861 agggtaaggctgcgtacaatacaccaaatggtgg 19265894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 21172097 - 21172064
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  21172097 agggtaaggctgcgtacaatacaccaaatggtgg 21172064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 27629681 - 27629714
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||||||||||||||| |||||||||||||||||    
T  27629681 agggtaaggttgcgtaaaatacaccaaatggtgg 27629714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 38262340 - 38262303
Alignment:
Q  271 atgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaaca 38262303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 42391188 - 42391155
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  42391188 agggtaaggctgcgtacaatacaccaaatggtgg 42391155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 19265791 - 19265839
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctgga 304  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||| ||||    
T  19265791 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttgga 19265839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 365
Target Start/End: Complemental strand, 35787355 - 35787327
Alignment:
Q  337 ggtaaggttgcgtacaatacaccaaatgg 365  Q
    |||||||||||||||||||||||||||||    
T  35787355 ggtaaggttgcgtacaatacaccaaatgg 35787327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 367
Target Start/End: Original strand, 38604573 - 38604605
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtg 367  Q
    ||||||||| |||||||||||||||||||||||    
T  38604573 agggtaaggctgcgtacaatacaccaaatggtg 38604605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 39123865 - 39123917
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaac 307  Q
    ||||||||||||||||||||||||| ||   || ||||||||||||| |||||    
T  39123865 tggtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaac 39123917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 6e-19; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 40272985 - 40272917
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  40272985 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaac 40272917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 13730777 - 13730711
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  13730777 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 13730711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 52926383 - 52926317
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  52926383 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 52926317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 8247862 - 8247796
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  8247862 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 8247796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 10870124 - 10870058
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  10870124 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 10870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 29366895 - 29366829
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| ||||| ||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||    
T  29366895 accttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaaca 29366829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 302
Target Start/End: Complemental strand, 4495824 - 4495777
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctg 302  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  4495824 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctg 4495777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 5173876 - 5173825
Alignment:
Q  259 aaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  5173876 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaac 5173825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 7697058 - 7696992
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||    
T  7697058 accttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaaca 7696992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 46421210 - 46421144
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||    
T  46421210 accttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaaca 46421144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 13628948 - 13628899
Alignment:
Q  259 aaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  13628948 aaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 13628899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 26869704 - 26869757
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  26869704 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaaca 26869757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 26573125 - 26573177
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  26573125 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 26573177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 53062036 - 53062088
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| ||| | ||||||||||||||||||    
T  53062036 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaaca 53062088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 308
Target Start/End: Original strand, 7942993 - 7943040
Alignment:
Q  261 agttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||| ||| || |||||||||||||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaaca 7943040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 9607202 - 9607253
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  9607202 gtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaaca 9607253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 34420802 - 34420751
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  34420802 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 34420751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 1217074 - 1217140
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||| ||||||| |||| ||| ||| ||||||||||||||||||||    
T  1217074 accttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaaca 1217140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 16735425 - 16735491
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||  ||| ||||||||||||| ||||||    
T  16735425 accttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaaca 16735491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 257 - 307
Target Start/End: Original strand, 25944468 - 25944518
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaac 307  Q
    ||||||||||||||| ||||||| ||| ||| |||||||||||||||||||    
T  25944468 gtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaac 25944518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 22123075 - 22123022
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||| ||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  22123075 tggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaaca 22123022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 39203583 - 39203616
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||||||||||||||||||||||||||||    
T  39203583 agggtaaggttgcgtacaatacaccaaatggtgg 39203616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 310
Target Start/End: Complemental strand, 54032705 - 54032664
Alignment:
Q  269 tcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||| ||| ||||||||||||||||||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaac 54032664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 22609764 - 22609816
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| | | ||||||||||| ||||||||    
T  22609764 ggtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaaca 22609816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 308
Target Start/End: Complemental strand, 30928302 - 30928254
Alignment:
Q  260 aagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||| |||||||||||||| ||| ||| ||||||||||||||||||||    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 30928254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 45620988 - 45620936
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||| |||||||||    
T  45620988 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaaca 45620936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 39203515 - 39203566
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||| ||| |||  |||||||||||| ||||||    
T  39203515 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaaca 39203566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 266 - 308
Target Start/End: Original strand, 516417 - 516459
Alignment:
Q  266 ttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 516459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 6411994 - 6411928
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| || |||||||||||||||||||| ||||  || ||| ||||||||||| || |||||    
T  6411994 accttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaaca 6411928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 4495752 - 4495719
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  4495752 agggtaaggctgcgtacaatacaccaaatggtgg 4495719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 9276333 - 9276366
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  9276333 agggtaaggctgcgtacaatacaccaaatggtgg 9276366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 15797289 - 15797322
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  15797289 agggtaaggctgcgtacaatacaccaaatggtgg 15797322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 16735509 - 16735542
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  16735509 agggtaaggctgcgtacaatacaccaaatggtgg 16735542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 21875004 - 21875041
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactg 279  Q
    ||||||||| || |||||||||||||||||||||||||    
T  21875004 accttgacgcaactggtaaagttgttgtcatgtgactg 21875041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 22123005 - 22122972
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  22123005 agggtaaggctgcgtacaatacaccaaatggtgg 22122972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 22609834 - 22609867
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  22609834 agggtaaggctgcgtacaatacaccaaatggtgg 22609867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 25517346 - 25517305
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaag 283  Q
    |||||| || || |||||||||||||||||||||||||||||    
T  25517346 accttggcgcaactggtaaagttgttgtcatgtgactggaag 25517305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 26869775 - 26869808
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  26869775 agggtaaggctgcgtacaatacaccaaatggtgg 26869808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 31592916 - 31592949
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  31592916 agggtaaggctgcgtacaatacaccaaatggtgg 31592949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 34771452 - 34771419
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  34771452 agggtaaggctgcgtacaatacaccaaatggtgg 34771419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 40272900 - 40272867
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  40272900 agggtaaggctgcgtacaatacaccaaatggtgg 40272867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 47624110 - 47624143
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  47624110 agggtaaggctgcgtacaatacaccaaatggtgg 47624143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 309
Target Start/End: Original strand, 22600416 - 22600483
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaa 309  Q
    |||||||||||| ||||||||||||| ||||||||||||||| | | |||||||||||||||||||||    
T  22600416 accttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaa 22600483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 23974756 - 23974810
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  23974756 ggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaac 23974810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 24448852 - 24448918
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  24448852 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 24448918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 41014281 - 41014347
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  41014281 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 41014347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 4619279 - 4619215
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4619279 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaa 4619215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 27328714 - 27328780
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| || ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  27328714 accttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaaca 27328780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 38879543 - 38879609
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  38879543 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 38879609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 43334164 - 43334230
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  43334164 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 43334230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 37024714 - 37024661
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  37024714 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 37024661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 1565393 - 1565461
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  1565393 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaac 1565461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 8170155 - 8170089
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||| | ||| ||| ||||||||||||||||||||    
T  8170155 accttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaaca 8170089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 35710275 - 35710341
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||||||| |||| ||| ||| ||||||||||||||||||||    
T  35710275 accttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaaca 35710341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 310
Target Start/End: Original strand, 1405170 - 1405217
Alignment:
Q  263 ttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaac 1405217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 7097848 - 7097816
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtg 367  Q
    |||||||||||||||||||||||||||||||||    
T  7097848 agggtaaggttgcgtacaatacaccaaatggtg 7097816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 10634301 - 10634251
Alignment:
Q  260 aagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||| ||||||||    
T  10634301 aagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaac 10634251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 368
Target Start/End: Original strand, 24448936 - 24448970
Alignment:
Q  334 tagggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||||||||| ||||||||||||||||||||||||    
T  24448936 tagggtaaggctgcgtacaatacaccaaatggtgg 24448970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 39079925 - 39079875
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    |||||||||||||||||||||| | ||| ||| ||||||||||| ||||||    
T  39079925 ggtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtcttggaaa 39079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 39301099 - 39301153
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||| |||| ||| ||| ||||||||||| ||| ||||||    
T  39301099 ggtaaagttgttgtcatgttactgaaaggtcacgggttcaagtcttgggaacaac 39301153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 2838825 - 2838858
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  2838825 agggtaaggctgcgtacaatacaccaaatggtgg 2838858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 8170072 - 8170039
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  8170072 agggtaaggctgcgtacaatacaccaaatggtgg 8170039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 296
Target Start/End: Complemental strand, 31362495 - 31362454
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaa 296  Q
    |||||||||||||||||||||| |||||| ||| ||||||||    
T  31362495 tggtaaagttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 32703411 - 32703452
Alignment:
Q  267 tgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 32703452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 32703469 - 32703502
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  32703469 agggtaaggctgcgtacaatacaccaaatggtgg 32703502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 34154902 - 34154869
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  34154902 agggtaaggctgcgtacaatacaccaaatggtgg 34154869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 41014365 - 41014398
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  41014365 agggtaaggctgcgtacaatacaccaaatggtgg 41014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 367
Target Start/End: Complemental strand, 16880735 - 16880703
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtg 367  Q
    ||||||||| |||||||||||||||||||||||    
T  16880735 agggtaaggctgcgtacaatacaccaaatggtg 16880703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 28516593 - 28516541
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||| ||| ||| ||| ||| ||||||||||| ||||||||    
T  28516593 ggtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaaca 28516541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 46991802 - 46991857
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  46991802 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaac 46991857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 20004252 - 20004199
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  20004252 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 20004199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 6925098 - 6925149
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  6925098 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaa 6925149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 308
Target Start/End: Original strand, 27201639 - 27201698
Alignment:
Q  249 cgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||| ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  27201639 cgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 27201698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 309
Target Start/End: Original strand, 20036218 - 20036272
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaa 309  Q
    ||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||    
T  20036218 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaa 20036272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 22930240 - 22930174
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  22930240 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 22930174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 34725269 - 34725203
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  34725269 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 34725203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 47214509 - 47214562
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  47214509 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 47214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 18724704 - 18724652
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  18724704 ggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 18724652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 2436052 - 2435998
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  2436052 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaac 2435998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 30395901 - 30395835
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||    
T  30395901 accttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaaca 30395835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 32632729 - 32632663
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||||| |||||| ||| ||| ||||||||||||||||||||    
T  32632729 accttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaaca 32632663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 25468421 - 25468368
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||| || ||| ||| ||||||||||||||||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaac 25468368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 2435946 - 2435894
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  2435946 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaaca 2435894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 14617037 - 14617089
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| ||| | ||||||||||||||||||    
T  14617037 ggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaaca 14617089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 306
Target Start/End: Original strand, 19414424 - 19414488
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    |||||| ||||| |||||||||||||||||| |||||| ||| ||| ||||||||||||| ||||    
T  19414424 accttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaa 19414488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 9939463 - 9939514
Alignment:
Q  259 aaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||| ||| ||| | ||||||||||||||||||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaac 9939514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 22327101 - 22327152
Alignment:
Q  259 aaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||| ||| ||  ||||||||||||||||||||||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaac 22327152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 18944628 - 18944694
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| |||  |||||||| ||||||||||    
T  18944628 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaaca 18944694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 334 - 368
Target Start/End: Complemental strand, 21910738 - 21910704
Alignment:
Q  334 tagggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||||||||||||||||||||||||||||||||||    
T  21910738 tagggtaaggttgcgtacaatacaccaaatggtgg 21910704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 23768493 - 23768427
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||| |||| || ||||||||||||||||||||||||| ||| |||  |||||||||| ||||||||    
T  23768493 acctcgacgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaaca 23768427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 34714608 - 34714674
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||||||||| || ||| ||| ||||||||||| ||||||||    
T  34714608 accttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaaca 34714674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 35117927 - 35117877
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    |||||||||||||||| ||||||| ||| ||| ||||||||||||||||||    
T  35117927 ggtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaa 35117877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 41319979 - 41319913
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||  || ||||||||||||||||||||||||| ||| |||  |||| ||||||||||||||    
T  41319979 accttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaaca 41319913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 45402080 - 45402145
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||||||||||||||||||||| |||||| | | ||||||||||||||||||||    
T  45402080 accttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaaca 45402145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 4430186 - 4430133
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||||||| ||| ||||| ||||| || |||||    
T  4430186 tggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtcttgaaaaca 4430133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 6983969 - 6983916
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||| ||||||| ||| |||  |||||||||||||||||||    
T  6983969 tggtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaaca 6983916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 27474279 - 27474332
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| |||  |||||||||| ||||||||    
T  27474279 tggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaaca 27474332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 46248113 - 46248060
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||  ||| ||||||||||| ||||||||    
T  46248113 tggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaaca 46248060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 47214579 - 47214612
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||||||||||||||||||||||||||||    
T  47214579 agggtaaggttgcgtacaatacaccaaatggtgg 47214612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 303
Target Start/End: Original strand, 8197041 - 8197089
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctgg 303  Q
    |||| |||||||||||||||||||| ||| ||| |||||||||||||||    
T  8197041 tggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgg 8197089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 19932925 - 19932869
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagt 298  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||    
T  19932925 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 25290162 - 25290214
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| ||| | ||||||||| ||||||||    
T  25290162 ggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 337 - 368
Target Start/End: Original strand, 14617110 - 14617141
Alignment:
Q  337 ggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||||||||||||||||||||||||||    
T  14617110 ggtaaggttgcgtacaatacaccaaatggtgg 14617141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 335 - 366
Target Start/End: Complemental strand, 25468351 - 25468320
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggt 366  Q
    ||||||||||||||||||||||||||||||||    
T  25468351 agggtaaggttgcgtacaatacaccaaatggt 25468320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 38478438 - 38478387
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||| ||||||||||||||||| ||| ||| ||||||||||||| ||||||    
T  38478438 gtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaaca 38478387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 301
Target Start/End: Original strand, 40424727 - 40424786
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcct 301  Q
    |||||| || || ||||||||||||||||||||||||| |||  || |||||||||||||    
T  40424727 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 306
Target Start/End: Complemental strand, 10378884 - 10378834
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    |||||||||||||||| ||||||| ||| | | ||||||||||||||||||    
T  10378884 ggtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 18742134 - 18742080
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaa 296  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||    
T  18742134 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaa 18742080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 308
Target Start/End: Complemental strand, 45812692 - 45812642
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||| ||| |||  ||||||||||||| |||||    
T  45812692 taaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaaca 45812642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 4349708 - 4349741
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  4349708 agggtaaggctgcgtacaatacaccaaatggtgg 4349741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 10378823 - 10378790
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  10378823 agggtaaggctgcgtacaatacaccaaatggtgg 10378790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 23768408 - 23768375
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  23768408 agggtaaggctgcgtacaatacaccaaatggtgg 23768375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 367
Target Start/End: Original strand, 23796538 - 23796567
Alignment:
Q  338 gtaaggttgcgtacaatacaccaaatggtg 367  Q
    ||||||||||||||||||||||||||||||    
T  23796538 gtaaggttgcgtacaatacaccaaatggtg 23796567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 32632645 - 32632612
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  32632645 agggtaaggctgcgtacaatacaccaaatggtgg 32632612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 35253275 - 35253242
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  35253275 agggtaaggctgcgtacaatacaccaaatggtgg 35253242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 38478370 - 38478337
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  38478370 agggtaaggctgcgtacaatacaccaaatggtgg 38478337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 44485267 - 44485214
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||| || ||| ||| |||||  |||||||||||||||    
T  44485267 gtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaac 44485214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 17470505 - 17470453
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||| ||||||| | | ||| ||||||||||||| ||||||    
T  17470505 ggtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaaca 17470453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 33222983 - 33223035
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| ||| || || ||||| ||||||||    
T  33222983 ggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaaca 33223035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 50760385 - 50760333
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||| |||||||||||||||  || ||| |||||||||||||| |||||    
T  50760385 ggtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaaca 50760333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 52910216 - 52910268
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| |||  ||||||| || ||||||||    
T  52910216 ggtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaaca 52910268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 10221 - 10155
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  10221 accttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 10155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 20549 - 20483
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  20549 accttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 20483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 9e-18; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 8455489 - 8455423
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  8455489 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaaca 8455423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 17667977 - 17668028
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaa 306  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  17667977 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaa 17668028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 40417031 - 40416976
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||    
T  40417031 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaac 40416976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 11514398 - 11514464
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  11514398 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaaca 11514464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 12024091 - 12024025
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  12024091 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 12024025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 14530280 - 14530346
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  14530280 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 14530346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 22371032 - 22371085
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||||| || ||| ||||||||||||||||||||    
T  22371032 tggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaaca 22371085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 23397741 - 23397794
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  23397741 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaaca 23397794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 17705470 - 17705522
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaac 307  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  17705470 tggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaac 17705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 25079891 - 25079823
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||| || || ||||||||||||||||||||||||||||| ||| ||||||||||| | ||||||||    
T  25079891 accttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaac 25079823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 44604832 - 44604884
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaac 44604884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 17623539 - 17623594
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||||    
T  17623539 tggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaac 17623594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 39914466 - 39914411
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||| |||||||||||    
T  39914466 tggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaac 39914411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 5841006 - 5841056
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  5841006 taaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaaca 5841056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 24200798 - 24200732
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||| | || ||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  24200798 accttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaaca 24200732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 25249910 - 25249844
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||    
T  25249910 accttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaaca 25249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 7214509 - 7214562
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||    
T  7214509 tggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaaca 7214562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 10543676 - 10543725
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaac 307  Q
    |||||||||||||||||||||| ||| ||| |||||||||||||||||||    
T  10543676 taaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 10543725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 310
Target Start/End: Original strand, 5450263 - 5450315
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||||||| ||| ||| |||||||| |||||||||||||    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaac 5450315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 242 - 310
Target Start/End: Original strand, 17896221 - 17896289
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||| || ||||||||||||||||||||||| | ||| ||| || |||||||||| ||||||||    
T  17896221 accttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaac 17896289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 21779432 - 21779370
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctgga 304  Q
    |||||| || || |||| |||||||||||||||||||| ||| ||| ||||||||||||||||    
T  21779432 accttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgga 21779370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 334 - 368
Target Start/End: Original strand, 30826082 - 30826116
Alignment:
Q  334 tagggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||||||||||||||||||||||||||||||||||    
T  30826082 tagggtaaggttgcgtacaatacaccaaatggtgg 30826116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 21779349 - 21779316
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||||||||||||||||||||||||||||    
T  21779349 agggtaaggttgcgtacaatacaccaaatggtgg 21779316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 99421 - 99370
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||| ||||||| ||| ||| ||||||||||||| ||||||    
T  99421 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaaca 99370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 310
Target Start/End: Complemental strand, 24860146 - 24860091
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||| ||||||||||||||||||||| | | ||||| ||| ||||||||||||    
T  24860146 tggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaac 24860091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 265 - 308
Target Start/End: Original strand, 25641487 - 25641530
Alignment:
Q  265 gttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 25641530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 45235976 - 45235925
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||| ||||||||||| ||||||| | ||||||||||| ||||||    
T  45235976 gtaaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaaca 45235925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 310
Target Start/End: Complemental strand, 17380391 - 17380341
Alignment:
Q  260 aagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||||| | ||| ||| ||||||||||| ||||||||||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaac 17380341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 334 - 368
Target Start/End: Complemental strand, 19977803 - 19977769
Alignment:
Q  334 tagggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||| ||||||||||||||||||||||||||||||    
T  19977803 taggataaggttgcgtacaatacaccaaatggtgg 19977769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 19977887 - 19977821
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || |||| |||||||||||||||||| | ||| ||| |||||||||| |||||||||    
T  19977887 accttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaaca 19977821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 27573583 - 27573641
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcc 300  Q
    |||||| || || ||||||||||||||||||||||||| ||| |||  |||||||||||    
T  27573583 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtcc 27573641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Complemental strand, 29420048 - 29419994
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||  |||||| ||| ||| | ||||||||||||||||||||    
T  29420048 ggtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaac 29419994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 310
Target Start/End: Original strand, 33795261 - 33795315
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    |||||||||||||||| |||| || ||| ||| |||||||||||| |||||||||    
T  33795261 ggtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaac 33795315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 8455404 - 8455371
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  8455404 agggtaaggctgcgtacaatacaccaaatggtgg 8455371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 9671156 - 9671209
Alignment:
Q  256 ggtaaagttgttgtcatgtgactgg-aagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||  ||| |||||||| |||||||||||    
T  9671156 ggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaaca 9671209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 9671226 - 9671259
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  9671226 agggtaaggctgcgtacaatacaccaaatggtgg 9671259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 10546210 - 10546243
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  10546210 agggtaaggctgcgtacaatacaccaaatggtgg 10546243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 12024007 - 12023974
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  12024007 agggtaaggctgcgtacaatacaccaaatggtgg 12023974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 14444720 - 14444757
Alignment:
Q  271 atgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaaca 14444757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 17623611 - 17623644
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  17623611 agggtaaggctgcgtacaatacaccaaatggtgg 17623644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 17668049 - 17668082
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  17668049 agggtaaggctgcgtacaatacaccaaatggtgg 17668082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 22371101 - 22371134
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  22371101 agggtaaggctgcgtacaatacaccaaatggtgg 22371134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 25249826 - 25249793
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  25249826 agggtaaggctgcgtacaatacaccaaatggtgg 25249793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 36871539 - 36871572
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  36871539 agggtaaggctgcgtacaatacaccaaatggtgg 36871572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 1758 - 1690
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||| || ||||||||||||||||||||||||| ||| ||| |||||||||||||| |||||||    
T  1758 accttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaac 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 1346926 - 1346992
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  1346926 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 1346992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 14975239 - 14975187
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  14975239 ggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaaca 14975187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 1354928 - 1354862
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  1354928 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaaca 1354862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 3815250 - 3815184
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||  ||| ||||||||||||||||||||    
T  3815250 accttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaaca 3815184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 9161085 - 9161151
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||| ||  |||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  9161085 accttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaaca 9161151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 2166570 - 2166517
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  2166570 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaac 2166517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 2178203 - 2178150
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  2178203 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaac 2178150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 12222077 - 12222024
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||    
T  12222077 tggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 12222024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 8409205 - 8409270
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaac 307  Q
    |||||| || || ||||||||||||||| ||||||||| ||| ||| || ||||||||||||||||    
T  8409205 accttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaac 8409270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 263 - 308
Target Start/End: Complemental strand, 29356009 - 29355964
Alignment:
Q  263 ttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||||||||||||| ||| ||| ||||||||||||||||||||    
T  29356009 ttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 29355964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 308
Target Start/End: Original strand, 6024198 - 6024261
Alignment:
Q  245 ttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || |||||||||||||||||||||| |||||| ||| || ||||| |||| ||||||    
T  6024198 ttgacgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaaca 6024261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 13905138 - 13905087
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaac 307  Q
    |||||||||||||||||||||||| ||| ||| ||| |||||||||| ||||    
T  13905138 ggtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaac 13905087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Original strand, 1347009 - 1347042
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  1347009 agggtaaggctgcgtacaatacaccaaatggtgg 1347042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 1354845 - 1354812
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  1354845 agggtaaggctgcgtacaatacaccaaatggtgg 1354812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 15866197 - 15866144
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||| ||||||| || ||| ||| |||||||| |||||||||||    
T  15866197 tggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaaca 15866144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 255 - 368
Target Start/End: Original strand, 46806 - 46911
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaacaaacaacatcttgtgtnnnnnnntagggtaaggttgcgtacaat 354  Q
    |||||||||||||||||||||||| |||| ||| |||||||||| ||||       ||||||| ||||||||       |||||||||||||||||||||    
T  46806 tggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctgg-------aaacaacctcttgtgt-aaaaaatagggtaaggttgcgtacaat 46897  T
Q  355 acaccaaatggtgg 368  Q
    ||||||||||||||    
T  46898 acaccaaatggtgg 46911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 24940 - 24883
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtc 299  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| |||||||||||    
T  24940 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc 24883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 30541 - 30607
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  30541 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaaca 30607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 310
Target Start/End: Original strand, 4134 - 4187
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||| ||||||||| ||| ||| ||||||||||||||||||||||    
T  4134 gtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaac 4187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 256 - 308
Target Start/End: Complemental strand, 13182 - 13130
Alignment:
Q  256 ggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||||||||||||| ||| |||  |||||||||||||||||||    
T  13182 ggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaaca 13130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 257 - 309
Target Start/End: Original strand, 83852 - 83904
Alignment:
Q  257 gtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaa 309  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  83852 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaa 83904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 10785 - 10840
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||||||||||| ||| |||||||||  ||| |||||||    
T  10785 tggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaac 10840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 310
Target Start/End: Original strand, 8866 - 8921
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaacaac 310  Q
    ||||||||||||||||||||||||| ||| |||  ||||||| |||||||||||||    
T  8866 tggtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaacaac 8921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 308
Target Start/End: Original strand, 24642 - 24692
Alignment:
Q  258 taaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||||||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  24642 taaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaaca 24692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 226579 - 226513
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||||||||||||||| ||| ||| || |||||||||| ||||||    
T  226579 accttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaaca 226513  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 308
Target Start/End: Original strand, 58952 - 59005
Alignment:
Q  255 tggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    ||||||| || |||||||||||||| ||| ||| ||||||||||||||||||||    
T  58952 tggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaaca 59005  T

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Target: scaffold0223 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 308
Target Start/End: Original strand, 11094 - 11159
Alignment:
Q  242 accttgacgtaagtggtaaagttgttgtcatgtgactggaagatcaggggttcaagtcctggaaaca 308  Q
    |||||| || || ||||||||||||| | ||||||||| ||| ||| ||||||||||||||||||||    
T  11094 accttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaaca 11159  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 35105 - 35072
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  35105 agggtaaggctgcgtacaatacaccaaatggtgg 35072  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 335 - 368
Target Start/End: Complemental strand, 48722 - 48689
Alignment:
Q  335 agggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    ||||||||| ||||||||||||||||||||||||    
T  48722 agggtaaggctgcgtacaatacaccaaatggtgg 48689  T

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Target: scaffold0180 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 368
Target Start/End: Complemental strand, 24220 - 24188
Alignment:
Q  336 gggtaaggttgcgtacaatacaccaaatggtgg 368  Q
    |||||||| ||||||||||||||||||||||||    
T  24220 gggtaaggctgcgtacaatacaccaaatggtgg 24188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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