View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19176_low_23 (Length: 270)
Name: NF19176_low_23
Description: NF19176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19176_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 15 - 254
Target Start/End: Original strand, 40774368 - 40774608
Alignment:
| Q |
15 |
cataggataggattggatccgttaataacttaatattgatcacttatctgaagtac-aagaggtttcaagcagtgtagtaaaactgttcttatctcaaga |
113 |
Q |
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| T |
40774368 |
cataggataggattggatccgttaataacttgatattgatcacttatctgaagtactaagaggtttcaagcagtgtagtaaaactgttcttatctcaaga |
40774467 |
T |
|
| Q |
114 |
cattccttagttaagtctactaacaaaccagctttatgagtgaatctaatgtaacaaaaagtttacaagtcaaaatatggaagagctcattacacccaca |
213 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
40774468 |
cattccttagttaagtctactaacataccagctttatgagtgaatctaatgtaacaaaaagtttacaagtcaaaatatggaagagctcattacactcaca |
40774567 |
T |
|
| Q |
214 |
accgatgggaccaaaactgtataatggtcaacacatattac |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
40774568 |
accgatgggaccaaaactgtataatggtcaacacatattac |
40774608 |
T |
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