View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19176_low_25 (Length: 265)
Name: NF19176_low_25
Description: NF19176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19176_low_25 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 18 - 252
Target Start/End: Original strand, 43223081 - 43223315
Alignment:
| Q |
18 |
cgaagaagcagcggcagagcgacgccgtcgcaaacgccgtcttcgcattgagcctcccttgaacgcaatccgtcctcctcctcaacaccagcctcgtgac |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43223081 |
cgaagaagcagcggcagagcgacgccgtcgcaaacgccgtcttcgcatcgagcctcccttgaacgcaatccgtcctcctcctcaacaccagcctcgtgac |
43223180 |
T |
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| Q |
118 |
cctaacgcccctcgccttccagactccacatcatcgctggtcggacctcgattgagtcttcacaaccgtgtccaatccttaattcgcgccgatgacctag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43223181 |
cctaacgcccctcgccttccagactccacatcatcgctggtcggacctcgattgagtcttcacaaccgtgtccaatccttaattcgcgccgatgacctag |
43223280 |
T |
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| Q |
218 |
acgccgcctccgccgcagctcgtcactccgtgttc |
252 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
43223281 |
acgccgcctccgccgcagctcgtcactccgtgttc |
43223315 |
T |
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