View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19176_low_41 (Length: 201)

Name: NF19176_low_41
Description: NF19176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19176_low_41
NF19176_low_41
[»] chr2 (44 HSPs)
chr2 (79-162)||(4386929-4387012)
chr2 (79-162)||(6849322-6849405)
chr2 (79-162)||(6849511-6849594)
chr2 (79-162)||(9224300-9224383)
chr2 (79-162)||(16887617-16887700)
chr2 (79-162)||(28224357-28224440)
chr2 (79-162)||(39477294-39477377)
chr2 (79-165)||(467136-467222)
chr2 (79-162)||(3595280-3595363)
chr2 (79-162)||(7716705-7716788)
chr2 (79-162)||(10883321-10883404)
chr2 (79-162)||(16571152-16571235)
chr2 (79-162)||(20243587-20243670)
chr2 (79-165)||(8113269-8113355)
chr2 (79-161)||(11256151-11256233)
chr2 (79-165)||(11256709-11256795)
chr2 (82-162)||(28223822-28223902)
chr2 (79-162)||(7583762-7583845)
chr2 (79-162)||(20244140-20244223)
chr2 (79-161)||(7717254-7717335)
chr2 (79-158)||(3595864-3595943)
chr2 (79-162)||(7583166-7583249)
chr2 (80-158)||(8963542-8963620)
chr2 (79-165)||(33847904-33847990)
chr2 (104-165)||(40165904-40165965)
chr2 (79-161)||(8112715-8112794)
chr2 (79-162)||(39476549-39476632)
chr2 (80-158)||(16571696-16571774)
chr2 (83-145)||(17918072-17918134)
chr2 (79-145)||(17918654-17918720)
chr2 (84-165)||(16903063-16903144)
chr2 (79-158)||(30161971-30162050)
chr2 (79-149)||(467310-467380)
chr2 (104-162)||(40166837-40166895)
chr2 (35-66)||(3595757-3595788)
chr2 (35-66)||(7583337-7583368)
chr2 (35-66)||(7716877-7716908)
chr2 (35-66)||(8112880-8112911)
chr2 (35-66)||(17918528-17918559)
chr2 (35-66)||(28223992-28224023)
chr2 (35-66)||(28224229-28224260)
chr2 (35-66)||(30162146-30162177)
chr2 (35-66)||(39477168-39477199)
chr2 (36-66)||(16571312-16571342)
[»] chr4 (68 HSPs)
chr4 (79-165)||(36945192-36945278)
chr4 (79-165)||(12639996-12640082)
chr4 (79-165)||(32901882-32901968)
chr4 (79-162)||(20075559-20075642)
chr4 (79-162)||(48091064-48091147)
chr4 (79-162)||(52597524-52597607)
chr4 (79-162)||(55816419-55816502)
chr4 (79-165)||(20422700-20422786)
chr4 (79-165)||(25369814-25369900)
chr4 (79-165)||(26424373-26424459)
chr4 (79-165)||(31876819-31876905)
chr4 (79-165)||(37567443-37567529)
chr4 (79-161)||(48782043-48782125)
chr4 (79-162)||(389374-389457)
chr4 (79-162)||(25370361-25370444)
chr4 (79-158)||(32291053-32291132)
chr4 (79-162)||(55815859-55815942)
chr4 (79-165)||(35427277-35427362)
chr4 (79-165)||(36944641-36944727)
chr4 (79-162)||(199033-199116)
chr4 (79-162)||(388787-388870)
chr4 (79-162)||(2713812-2713895)
chr4 (79-162)||(12640555-12640638)
chr4 (79-162)||(32902434-32902517)
chr4 (79-162)||(36111186-36111268)
chr4 (79-158)||(40344541-40344620)
chr4 (79-157)||(31877401-31877479)
chr4 (79-161)||(52597680-52597762)
chr4 (79-163)||(3708806-3708890)
chr4 (79-158)||(29809056-29809135)
chr4 (104-162)||(199220-199278)
chr4 (79-149)||(20076155-20076225)
chr4 (79-149)||(28223610-28223680)
chr4 (79-157)||(40848099-40848177)
chr4 (79-160)||(31842692-31842772)
chr4 (79-162)||(33569754-33569837)
chr4 (79-162)||(40345099-40345182)
chr4 (79-145)||(37566954-37567020)
chr4 (104-162)||(40847711-40847769)
chr4 (79-149)||(48781529-48781599)
chr4 (104-165)||(6862678-6862739)
chr4 (79-162)||(20422165-20422245)
chr4 (111-162)||(48090500-48090551)
chr4 (111-162)||(26423793-26423844)
chr4 (35-66)||(6862854-6862885)
chr4 (35-66)||(12640437-12640468)
chr4 (35-66)||(20422331-20422362)
chr4 (35-66)||(20422582-20422613)
chr4 (35-66)||(25369986-25370017)
chr4 (35-66)||(28223758-28223789)
chr4 (35-66)||(31877292-31877323)
chr4 (35-66)||(32291228-32291259)
chr4 (35-66)||(32902315-32902346)
chr4 (35-66)||(35427447-35427478)
chr4 (35-66)||(35427732-35427763)
chr4 (35-66)||(36111070-36111101)
chr4 (35-66)||(37567067-37567098)
chr4 (35-66)||(40344707-40344738)
chr4 (35-66)||(40847869-40847900)
chr4 (35-66)||(40847980-40848011)
chr4 (35-66)||(48090948-48090979)
chr4 (35-66)||(48781687-48781718)
chr4 (35-66)||(48781924-48781955)
chr4 (35-65)||(3709265-3709295)
chr4 (35-65)||(20075739-20075769)
chr4 (35-65)||(32902055-32902085)
chr4 (111-145)||(47328397-47328431)
chr4 (36-66)||(55816293-55816323)
[»] chr8 (46 HSPs)
chr8 (79-162)||(11998490-11998573)
chr8 (79-162)||(33113609-33113692)
chr8 (79-162)||(33114157-33114240)
chr8 (79-165)||(30115965-30116051)
chr8 (79-161)||(43480651-43480733)
chr8 (79-160)||(44062021-44062102)
chr8 (79-162)||(7818508-7818591)
chr8 (79-162)||(7819066-7819149)
chr8 (79-162)||(11999049-11999132)
chr8 (79-162)||(16889797-16889880)
chr8 (79-162)||(38778188-38778271)
chr8 (79-162)||(40309469-40309552)
chr8 (79-162)||(43481250-43481333)
chr8 (79-162)||(43591585-43591668)
chr8 (79-158)||(4374270-4374349)
chr8 (79-162)||(16880487-16880570)
chr8 (79-162)||(16889229-16889312)
chr8 (79-162)||(30115401-30115484)
chr8 (79-162)||(43591041-43591124)
chr8 (79-157)||(10805987-10806065)
chr8 (79-165)||(44062565-44062651)
chr8 (79-165)||(36848170-36848252)
chr8 (79-162)||(2209040-2209123)
chr8 (83-162)||(39852188-39852267)
chr8 (80-165)||(4374962-4375047)
chr8 (79-160)||(10806406-10806487)
chr8 (79-154)||(4373728-4373803)
chr8 (79-162)||(35237293-35237376)
chr8 (79-158)||(16879926-16880005)
chr8 (79-161)||(38778764-38778846)
chr8 (79-145)||(39852772-39852838)
chr8 (102-162)||(40907633-40907692)
chr8 (35-66)||(2209218-2209249)
chr8 (35-66)||(10806302-10806333)
chr8 (35-66)||(11998932-11998963)
chr8 (35-66)||(16889400-16889431)
chr8 (35-66)||(33113789-33113820)
chr8 (35-66)||(33114039-33114070)
chr8 (35-66)||(35237462-35237493)
chr8 (35-66)||(38778655-38778686)
chr8 (35-65)||(30115568-30115598)
chr8 (111-145)||(35237865-35237899)
chr8 (35-65)||(40309345-40309375)
chr8 (35-65)||(43481123-43481153)
chr8 (36-66)||(43591463-43591493)
chr8 (36-65)||(40907791-40907820)
[»] chr3 (69 HSPs)
chr3 (79-162)||(37373999-37374082)
chr3 (79-165)||(31014368-31014454)
chr3 (79-162)||(3944929-3945012)
chr3 (79-162)||(42356270-42356353)
chr3 (79-165)||(44868038-44868124)
chr3 (79-158)||(19555308-19555387)
chr3 (79-162)||(23584852-23584935)
chr3 (79-162)||(23599675-23599758)
chr3 (79-162)||(25025733-25025816)
chr3 (79-158)||(38575059-38575138)
chr3 (79-162)||(47737642-47737725)
chr3 (79-162)||(50687677-50687760)
chr3 (79-160)||(41875585-41875666)
chr3 (79-155)||(37374856-37374932)
chr3 (79-162)||(8427712-8427795)
chr3 (79-162)||(23584271-23584354)
chr3 (79-162)||(23599094-23599177)
chr3 (79-162)||(29342375-29342458)
chr3 (79-154)||(37374575-37374650)
chr3 (79-162)||(55281869-55281952)
chr3 (80-162)||(44868588-44868670)
chr3 (79-157)||(49752312-49752390)
chr3 (81-158)||(29342964-29343041)
chr3 (79-160)||(49752879-49752960)
chr3 (79-146)||(19555892-19555959)
chr3 (83-158)||(25025212-25025287)
chr3 (79-158)||(32672204-32672283)
chr3 (79-162)||(37375437-37375520)
chr3 (79-162)||(48218625-48218708)
chr3 (79-162)||(55282390-55282473)
chr3 (79-149)||(40887910-40887980)
chr3 (79-148)||(24220627-24220696)
chr3 (79-154)||(31014893-31014968)
chr3 (79-158)||(38575611-38575690)
chr3 (79-158)||(43658864-43658943)
chr3 (79-149)||(32672752-32672822)
chr3 (79-149)||(47737110-47737180)
chr3 (79-161)||(48219204-48219286)
chr3 (79-157)||(50675094-50675172)
chr3 (79-154)||(24221141-24221216)
chr3 (79-143)||(8427269-8427333)
chr3 (79-162)||(43103933-43104016)
chr3 (79-128)||(3945478-3945527)
chr3 (79-162)||(50674663-50674741)
chr3 (35-66)||(8427584-8427615)
chr3 (35-66)||(23584724-23584755)
chr3 (35-66)||(23599547-23599578)
chr3 (35-66)||(25025379-25025410)
chr3 (35-66)||(29342546-29342577)
chr3 (35-66)||(29342834-29342865)
chr3 (35-66)||(32672368-32672399)
chr3 (35-66)||(37374169-37374200)
chr3 (35-66)||(37375313-37375344)
chr3 (35-66)||(43104096-43104127)
chr3 (35-66)||(44868460-44868491)
chr3 (35-66)||(48218795-48218826)
chr3 (35-66)||(48219087-48219118)
chr3 (35-66)||(49752478-49752509)
chr3 (35-65)||(3945099-3945129)
chr3 (35-65)||(19555773-19555803)
chr3 (35-65)||(32672626-32672656)
chr3 (35-65)||(38575233-38575263)
chr3 (36-66)||(43658429-43658459)
chr3 (35-65)||(43658747-43658777)
chr3 (35-65)||(50687290-50687320)
chr3 (79-144)||(42356778-42356843)
chr3 (116-165)||(50687133-50687182)
chr3 (35-63)||(37374471-37374499)
chr3 (35-63)||(40887488-40887516)
[»] scaffold0007 (1 HSPs)
scaffold0007 (79-165)||(11296-11382)
[»] chr6 (24 HSPs)
chr6 (79-165)||(5523231-5523317)
chr6 (80-165)||(30610742-30610827)
chr6 (79-162)||(6032192-6032275)
chr6 (79-162)||(30611314-30611397)
chr6 (79-162)||(33668255-33668338)
chr6 (79-161)||(6032722-6032804)
chr6 (79-156)||(12809671-12809748)
chr6 (79-162)||(5523815-5523898)
chr6 (79-154)||(12809111-12809186)
chr6 (79-162)||(13936609-13936692)
chr6 (79-158)||(13944328-13944407)
chr6 (79-162)||(33668800-33668882)
chr6 (79-168)||(31723860-31723950)
chr6 (79-161)||(33648132-33648214)
chr6 (79-155)||(31724417-31724494)
chr6 (35-66)||(5523415-5523446)
chr6 (35-66)||(6032349-6032380)
chr6 (35-66)||(6032605-6032636)
chr6 (35-66)||(33648013-33648044)
chr6 (35-66)||(33668426-33668457)
chr6 (35-65)||(12809556-12809586)
chr6 (36-66)||(30611200-30611230)
chr6 (35-65)||(33668674-33668704)
chr6 (35-64)||(13944485-13944514)
[»] chr7 (49 HSPs)
chr7 (79-162)||(4894533-4894616)
chr7 (79-162)||(36682869-36682952)
chr7 (79-162)||(47814604-47814687)
chr7 (79-165)||(4895051-4895137)
chr7 (79-162)||(22275459-22275541)
chr7 (79-162)||(34853425-34853508)
chr7 (79-162)||(36683433-36683516)
chr7 (79-162)||(47814005-47814088)
chr7 (79-165)||(19816861-19816947)
chr7 (82-158)||(32499287-32499363)
chr7 (79-154)||(18520899-18520974)
chr7 (79-162)||(19816298-19816381)
chr7 (79-162)||(24044012-24044095)
chr7 (79-162)||(42456485-42456568)
chr7 (79-165)||(33806000-33806086)
chr7 (80-162)||(46815032-46815114)
chr7 (79-148)||(24323951-24324020)
chr7 (83-155)||(32499845-32499917)
chr7 (79-162)||(22276045-22276128)
chr7 (79-162)||(30711822-30711905)
chr7 (79-162)||(34853965-34854048)
chr7 (79-162)||(42455955-42456038)
chr7 (79-162)||(27855600-27855682)
chr7 (79-162)||(46732601-46732684)
chr7 (79-162)||(46814439-46814522)
chr7 (80-149)||(36620710-36620779)
chr7 (79-132)||(27856112-27856165)
chr7 (83-148)||(46012914-46012978)
chr7 (83-158)||(36620156-36620231)
chr7 (35-66)||(4894704-4894735)
chr7 (35-66)||(22275929-22275960)
chr7 (35-66)||(24043895-24043926)
chr7 (35-66)||(24323834-24323865)
chr7 (35-66)||(27855768-27855799)
chr7 (35-66)||(27855985-27856016)
chr7 (35-66)||(32499458-32499489)
chr7 (35-66)||(32499709-32499740)
chr7 (35-66)||(33806173-33806204)
chr7 (35-66)||(34853594-34853625)
chr7 (35-66)||(36620581-36620612)
chr7 (35-66)||(36683048-36683079)
chr7 (35-66)||(42456103-42456134)
chr7 (35-66)||(42456354-42456385)
chr7 (35-66)||(46732783-46732814)
chr7 (36-66)||(4894935-4894965)
chr7 (35-65)||(19816468-19816498)
chr7 (36-66)||(34853842-34853872)
chr7 (36-65)||(18521317-18521346)
chr7 (36-65)||(30711981-30712010)
[»] chr5 (25 HSPs)
chr5 (79-162)||(3957534-3957617)
chr5 (79-165)||(4929475-4929561)
chr5 (79-165)||(28075938-28076024)
chr5 (79-162)||(4928905-4928988)
chr5 (79-154)||(33430084-33430159)
chr5 (79-158)||(42408534-42408613)
chr5 (79-149)||(3739632-3739702)
chr5 (79-165)||(26687531-26687617)
chr5 (79-165)||(26957262-26957348)
chr5 (79-160)||(5324372-5324453)
chr5 (79-165)||(21770025-21770115)
chr5 (79-165)||(8813652-8813738)
chr5 (79-158)||(3739038-3739117)
chr5 (79-162)||(42408026-42408109)
chr5 (79-157)||(13738099-13738176)
chr5 (83-145)||(26688030-26688092)
chr5 (83-145)||(26957761-26957823)
chr5 (79-154)||(3958103-3958178)
chr5 (35-66)||(3739205-3739236)
chr5 (35-66)||(3739515-3739546)
chr5 (35-66)||(4929083-4929114)
chr5 (35-66)||(8813258-8813289)
chr5 (35-66)||(8813532-8813563)
chr5 (35-65)||(4929359-4929389)
chr5 (35-65)||(28075810-28075840)
[»] chr1 (47 HSPs)
chr1 (79-162)||(27797151-27797234)
chr1 (79-162)||(43368224-43368307)
chr1 (79-162)||(43368804-43368887)
chr1 (79-162)||(1403657-1403739)
chr1 (79-162)||(42839517-42839600)
chr1 (79-162)||(49533777-49533860)
chr1 (79-165)||(8560187-8560273)
chr1 (79-148)||(7219617-7219686)
chr1 (79-162)||(1403074-1403157)
chr1 (79-162)||(27816973-27817056)
chr1 (79-162)||(42838971-42839054)
chr1 (79-158)||(48843931-48844010)
chr1 (79-165)||(27797705-27797791)
chr1 (79-161)||(48843615-48843697)
chr1 (79-168)||(52859757-52859847)
chr1 (79-144)||(6287672-6287737)
chr1 (79-156)||(7219048-7219125)
chr1 (79-162)||(8560712-8560794)
chr1 (79-165)||(27934264-27934349)
chr1 (79-165)||(41563210-41563296)
chr1 (79-149)||(41563761-41563831)
chr1 (79-165)||(42840282-42840368)
chr1 (79-165)||(48369513-48369599)
chr1 (79-148)||(51247876-51247945)
chr1 (79-162)||(51248452-51248535)
chr1 (79-149)||(6288173-6288243)
chr1 (79-149)||(37725426-37725496)
chr1 (83-162)||(42839735-42839814)
chr1 (79-162)||(49534365-49534448)
chr1 (79-168)||(7782660-7782750)
chr1 (80-156)||(52859189-52859265)
chr1 (112-148)||(37725672-37725708)
chr1 (35-66)||(8560359-8560390)
chr1 (35-66)||(41563641-41563672)
chr1 (35-66)||(43368394-43368425)
chr1 (35-66)||(43368685-43368716)
chr1 (35-66)||(48843826-48843857)
chr1 (35-66)||(49534246-49534277)
chr1 (35-66)||(51248334-51248365)
chr1 (35-66)||(52859638-52859669)
chr1 (35-65)||(7219500-7219530)
chr1 (36-66)||(27797583-27797613)
chr1 (36-66)||(42839147-42839177)
chr1 (36-66)||(42839910-42839940)
chr1 (36-66)||(52859362-52859392)
chr1 (35-64)||(6288055-6288084)
chr1 (38-66)||(48843778-48843806)
[»] scaffold0229 (1 HSPs)
scaffold0229 (79-162)||(15202-15285)
[»] scaffold1095 (2 HSPs)
scaffold1095 (79-161)||(1520-1602)
scaffold1095 (35-66)||(1677-1708)
[»] scaffold0368 (2 HSPs)
scaffold0368 (83-162)||(11757-11836)
scaffold0368 (36-66)||(11631-11661)


Alignment Details
Target: chr2 (Bit Score: 76; Significance: 2e-35; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 4386929 - 4387012
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  4386929 gaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 4387012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 6849405 - 6849322
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6849405 gaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 6849322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 6849511 - 6849594
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6849511 gaagaaaaatctagtgttaagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 6849594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 9224383 - 9224300
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9224383 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 9224300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 16887700 - 16887617
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  16887700 gaagaaaaatctagtgttcagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactatcccatggtgg 16887617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 28224357 - 28224440
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  28224357 gaagaaaaatttagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 28224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 39477294 - 39477377
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  39477294 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 39477377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 467222 - 467136
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  467222 gaagaaaaatctagtgttgagagaccatgttaagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtggaaa 467136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 3595363 - 3595280
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  3595363 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcactttatctaatcattgaatccaactttcccatggtgg 3595280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 7716788 - 7716705
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7716788 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 7716705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 10883404 - 10883321
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  10883404 gaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatggtgg 10883321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 16571235 - 16571152
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  16571235 gaagaaaaatctagtgttgagagagcatgttaagaatatgtttttcacttaatctaatcattgaatccaactttcccatggtgg 16571152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 20243670 - 20243587
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  20243670 gaagaaaaatctaatgttgagagaacatgttaagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgg 20243587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 8113269 - 8113355
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  8113269 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacataatctaatcatcgaatccaactttcccatggtggaaa 8113355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 11256233 - 11256151
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  11256233 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtg 11256151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 11256709 - 11256795
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||    
T  11256709 gaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaatcattgaatccaactttctcatggtggaaa 11256795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 82 - 162
Target Start/End: Complemental strand, 28223902 - 28223822
Alignment:
Q  82 gaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  28223902 gaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgg 28223822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 7583762 - 7583845
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  7583762 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaagctaatcattgaatccaactttcccatagtgg 7583845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 20244140 - 20244223
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||| ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  20244140 gaagaaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgg 20244223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 7717254 - 7717335
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||    
T  7717254 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatataatcattgaat-caactttcccatggtg 7717335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 3595864 - 3595943
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  3595864 gaagaaaaatctagtgttgagagagcatgttaagaatatgtttttcacttaatctaatcattgaatccaacttttccatg 3595943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 7583249 - 7583166
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||    
T  7583249 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacctaatctaatcattgaatccaattttctcatggtgg 7583166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 80 - 158
Target Start/End: Complemental strand, 8963620 - 8963542
Alignment:
Q  80 aagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    ||||||||||||||||| ||| | |||||||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  8963620 aagaaaaatctagtgttgagagagcatgttaaaaatatgtttttcacttaatctaatcattgaatccaactttcccatg 8963542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 33847990 - 33847904
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||| ||||||| ||| | |||||||||||||||||||||||||||||||||  ||||||||| | |||||||||||||||    
T  33847990 gaagaaaaatatagtgttgagagagcatgttaagaatatgttcttcacttaatctaattgttgaatccatctttcccatggtggaaa 33847904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 40165965 - 40165904
Alignment:
Q  104 catgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  40165965 catgttaagaatatgttcttcacttaatccaatcattgaatccaactttcccatggtggaaa 40165904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 8112794 - 8112715
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| |||||||||| |||||||||   ||||||||||||||||||||||||| |||||||||||    
T  8112794 gaagaaaaatctagtgttgagagaacatgttaaaaatatgttc---acttaatctaatcattgaatccaactttcccatggtg 8112715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 39476632 - 39476549
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||  ||| ||||||| ||||    
T  39476632 gaagaaaaatctagtgttgagagatcatgttaagaatatattcttcacttaatctaatcattgaattaaactttcccatagtgg 39476549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 16571696 - 16571774
Alignment:
Q  80 aagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||| |||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||  ||||||||    
T  16571696 aagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttgatctaatcattgaatccaattttcccatg 16571774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 145
Target Start/End: Complemental strand, 17918134 - 17918072
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatc 145  Q
    |||||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||    
T  17918134 aaaaatctagtgttgagagaacatgttaagaatatattcttcacttaatctaatcattgaatc 17918072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 17918654 - 17918720
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatc 145  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||    
T  17918654 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatc 17918720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 16903063 - 16903144
Alignment:
Q  84 aaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    ||||||||||||| | | | |||||||| |||||||| |||||||||||||||||||||||||||| ||| |||||||||||    
T  16903063 aaaatctagtgttgaaagagcatgttaaaaatatgttattcacttaatctaatcattgaatccaactttctcatggtggaaa 16903144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 30162050 - 30161971
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    ||||||||||||| |||| | | |  ||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  30162050 gaagaaaaatctaatgttgaaagagtatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatg 30161971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 467310 - 467380
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    ||||||||||||| | || ||| |||||||||||||||||||||||||||||| |||| ||||||| ||||    
T  467310 gaagaaaaatctaatattgagagaacatgttaagaatatgttcttcacttaatttaattattgaattcaac 467380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 40166837 - 40166895
Alignment:
Q  104 catgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  40166837 catgttaaaaatatgttcttgacttaatctaatcattgaatccaattttcccatggtgg 40166895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 3595788 - 3595757
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  3595788 aaattctgtaattcatttattgaatgttagaa 3595757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 7583337 - 7583368
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  7583337 aaattctgtaattcatttattgaatgttagaa 7583368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 7716877 - 7716908
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  7716877 aaattctgtaattcatttattgaatgttagaa 7716908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 8112880 - 8112911
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  8112880 aaattctgtaattcatttattgaatgttagaa 8112911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 17918559 - 17918528
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  17918559 aaattctgtaattcatttattgaatgttagaa 17918528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 28223992 - 28224023
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  28223992 aaattctgtaattcatttattgaatgttagaa 28224023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 28224260 - 28224229
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  28224260 aaattctgtaattcatttattgaatgttagaa 28224229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 30162146 - 30162177
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  30162146 aaattctgtaattcatttattgaatgttagaa 30162177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 39477199 - 39477168
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  39477199 aaattctgtaattcatttattgaatgttagaa 39477168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 16571312 - 16571342
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  16571312 aattctgtaattcatttattgaatgttagaa 16571342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 9e-35; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 36945192 - 36945278
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  36945192 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaa 36945278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 12640082 - 12639996
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  12640082 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaa 12639996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 32901968 - 32901882
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  32901968 gaagaaaaatctagtgttgagaaagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaa 32901882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 20075642 - 20075559
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  20075642 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 20075559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 48091064 - 48091147
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48091064 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 48091147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 52597607 - 52597524
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  52597607 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtgg 52597524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 55816419 - 55816502
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  55816419 gaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 55816502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 20422700 - 20422786
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  20422700 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaa 20422786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 25369900 - 25369814
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25369900 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtggaaa 25369814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 26424373 - 26424459
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  26424373 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaa 26424459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 31876905 - 31876819
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  31876905 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaa 31876819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 37567443 - 37567529
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  37567443 gaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaa 37567529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 48782043 - 48782125
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48782043 gaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtg 48782125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 389374 - 389457
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||    
T  389374 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcactgaatccaacttttccatggtgg 389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 25370361 - 25370444
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||| || ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25370361 gaagaaaaatctagttttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 25370444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 32291132 - 32291053
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32291132 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 32291053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 55815942 - 55815859
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  55815942 gaagaaaaatctagtgttaagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgg 55815859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 35427362 - 35427277
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||    
T  35427362 gaagaaaaatctagtgtttagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggcggaaa 35427277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 36944727 - 36944641
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  36944727 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaa 36944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 199116 - 199033
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  199116 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatttaactttcccatggtgg 199033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 388870 - 388787
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  388870 gaagaaaaatctagtgttgagagagcatgttaaaaatatgtttttcacttaatctaatcattgaatccaactttcccatggtgg 388787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 2713812 - 2713895
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  2713812 gaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgg 2713895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 12640555 - 12640638
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||| ||||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  12640555 gaagaaaaatttagtgttgagagaacatgttaaaaatatgttcttcgcttaatctaatcattgaatccaactttcccatggtgg 12640638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 32902434 - 32902517
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  32902434 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgg 32902517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 36111186 - 36111268
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  36111186 gaagaaaaatctagtgtttagagaatatgttaagaatatgttcttcacttaatctaatcattgaatccaa-tttcccatggtgg 36111268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 40344620 - 40344541
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||    
T  40344620 gaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatctaataatttaatccaactttctcatg 40344541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 31877401 - 31877479
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccat 157  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  31877401 gaagaaaaatctagtgttgagataacatgttaaaaatatgttcttcacttaatctaatcattaaatccaactttcccat 31877479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 52597680 - 52597762
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  52597680 gaagaaaaatctagtgttgagagagcatggtaagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtg 52597762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 3708890 - 3708806
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgga 163  Q
    |||||||||||||||| | ||| |||||| ||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  3708890 gaagaaaaatctagtgctgagagaacatgataagagtatgttctttacttaatctaatcattgaatccaactttcccatggtgga 3708806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 29809056 - 29809135
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| | | | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  29809056 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatg 29809135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 199220 - 199278
Alignment:
Q  104 catgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  199220 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 199278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 20076155 - 20076225
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  20076155 gaagaaaaatctagagttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 20076225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 28223680 - 28223610
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||||||||||| ||| | | ||||||||||||||||||||||||||||||||||||||||||||    
T  28223680 gaagaaaaatctagtgttgagagagcgtgttaagaatatgttcttcacttaatctaatcattgaatccaac 28223610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 40848099 - 40848177
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccat 157  Q
    ||||||||||  |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  40848099 gaagaaaaattcagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccat 40848177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 31842692 - 31842772
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggt 160  Q
    ||||||||||| |||||| ||| |||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||    
T  31842692 gaagaaaaatccagtgttgagagaacatgttaataatatgttcttcacttaatctaatcattgaatcc-actttcccatggt 31842772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 33569837 - 33569754
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | | |||||| |||||||||||||||||||||||||| |||||||||||| || |||||||||    
T  33569837 gaagaaaaatctagtgttgaaagagcatgttgagaatatgttcttcacttaatctaattattgaatccaacttttccatggtgg 33569754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 40345099 - 40345182
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||| |||| ||||||||||||||||||||||||||||||||| ||| ||||||| ||||    
T  40345099 gaagaaaaatctagtgttgagagaccatattaaaaatatgttcttcacttaatctaatcattgaatctaactttcccattgtgg 40345182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 37567020 - 37566954
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatc 145  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||| |||||||||||||    
T  37567020 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatc 37566954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 162
Target Start/End: Complemental strand, 40847769 - 40847711
Alignment:
Q  104 catgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  40847769 catgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatggtgg 40847711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 48781599 - 48781529
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||| ||||||| | ||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  48781599 gaagaaaaatttagtgttgaaaaagcatgttaagaatatattcatcacttaatctaatcattgaatccaac 48781529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 165
Target Start/End: Complemental strand, 6862739 - 6862678
Alignment:
Q  104 catgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||||    
T  6862739 catgttaagaatatgttcttcacttaatctaatctttgaatccaactttcctatggtagaaa 6862678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 20422245 - 20422165
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||   |||||||||||||||||||||||| | | ||||||||||||    
T  20422245 gaagaaaaatctagtgttgagagagcatgttaagaatatg---ttcacttaatctaatcattgaatctacctttcccatggtgg 20422165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 48090551 - 48090500
Alignment:
Q  111 agaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  48090551 agaatatgttctacacttaatctaatcattgaatccaactttcccatggtgg 48090500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 26423844 - 26423793
Alignment:
Q  111 agaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  26423844 agaatatgttcttcacttaatctaatcattgaatccaactttttcatggtgg 26423793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 6862854 - 6862885
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  6862854 aaattctgtaattcatttattgaatgttagaa 6862885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 12640468 - 12640437
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  12640468 aaattctgtaattcatttattgaatgttagaa 12640437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 20422331 - 20422362
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  20422331 aaattctgtaattcatttattgaatgttagaa 20422362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 20422613 - 20422582
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  20422613 aaattctgtaattcatttattgaatgttagaa 20422582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 25369986 - 25370017
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  25369986 aaattctgtaattcatttattgaatgttagaa 25370017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 28223758 - 28223789
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  28223758 aaattctgtaattcatttattgaatgttagaa 28223789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 31877323 - 31877292
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  31877323 aaattctgtaattcatttattgaatgttagaa 31877292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 32291228 - 32291259
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  32291228 aaattctgtaattcatttattgaatgttagaa 32291259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 32902346 - 32902315
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  32902346 aaattctgtaattcatttattgaatgttagaa 32902315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 35427447 - 35427478
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  35427447 aaattctgtaattcatttattgaatgttagaa 35427478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 35427763 - 35427732
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  35427763 aaattctgtaattcatttattgaatgttagaa 35427732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 36111101 - 36111070
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  36111101 aaattctgtaattcatttattgaatgttagaa 36111070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 37567067 - 37567098
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  37567067 aaattctgtaattcatttattgaatgttagaa 37567098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 40344707 - 40344738
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  40344707 aaattctgtaattcatttattgaatgttagaa 40344738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 40847869 - 40847900
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  40847869 aaattctgtaattcatttattgaatgttagaa 40847900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 40848011 - 40847980
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  40848011 aaattctgtaattcatttattgaatgttagaa 40847980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 48090979 - 48090948
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  48090979 aaattctgtaattcatttattgaatgttagaa 48090948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 48781687 - 48781718
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  48781687 aaattctgtaattcatttattgaatgttagaa 48781718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 48781955 - 48781924
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  48781955 aaattctgtaattcatttattgaatgttagaa 48781924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 3709295 - 3709265
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  3709295 aaattctgtaattcatttattgaatgttaga 3709265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 20075739 - 20075769
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  20075739 aaattctgtaattcatttattgaatgttaga 20075769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 32902055 - 32902085
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  32902055 aaattctgtaattcatttattgaatgttaga 32902085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 47328397 - 47328431
Alignment:
Q  111 agaatatgttcttcacttaatctaatcattgaatc 145  Q
    |||||||||||||||||||||||||| ||||||||    
T  47328397 agaatatgttcttcacttaatctaattattgaatc 47328431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 55816323 - 55816293
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  55816323 aattctgtaattcatttattgaatgttagaa 55816293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 6e-33; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 11998573 - 11998490
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11998573 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 11998490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 33113692 - 33113609
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  33113692 gaagaaaaatctagtgttaagagaacatgttaagaatatattcttcacttaatctaatcattgaatccaactttcccatggtgg 33113609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 33114157 - 33114240
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  33114157 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 33114240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 30115965 - 30116051
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  30115965 gaagaaaaatctagtgttgagagaacatgttaagaatatattctttacttaatctaatcattgaatccaactttcccatggtggaaa 30116051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 43480733 - 43480651
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||    
T  43480733 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcatttaatccaactttcccatggtg 43480651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 44062102 - 44062021
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggt 160  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44062102 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggt 44062021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 7818591 - 7818508
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  7818591 gaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 7818508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 7819066 - 7819149
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  7819066 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcgcatggtgg 7819149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 11999049 - 11999132
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  11999049 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttcatctaatcattgaatccaactttcccatggtgg 11999132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 16889797 - 16889880
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  16889797 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactttcccatggtgg 16889880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 38778271 - 38778188
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38778271 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 38778188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 40309469 - 40309552
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  40309469 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtgg 40309552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 43481250 - 43481333
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43481250 gaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 43481333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 43591585 - 43591668
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  43591585 gaagaaaaatctagtgttaagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgg 43591668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 4374270 - 4374349
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    ||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4374270 gaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 4374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 16880487 - 16880570
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  16880487 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcacatggtgg 16880570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 16889312 - 16889229
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | | |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  16889312 gaagaaaaatctagtgttgaaagagcatgataagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 16889229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 30115484 - 30115401
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  30115484 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgg 30115401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 43591124 - 43591041
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  43591124 gaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcatttaatctaatcattgaattcaactttcccatggtgg 43591041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 10806065 - 10805987
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccat 157  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  10806065 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcatttaatctaatcattgaatccaactttcccat 10805987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 44062565 - 44062651
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||| ||||| |||| |||||||||||||||||||||||||| |||||||||||||||    
T  44062565 gaagaaaaatctagtgttgagagagcatgttaataatatattctccacttaatctaatcattgaatccaactttcccatggtggaaa 44062651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 36848170 - 36848252
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||||    |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  36848170 gaagaaaaatctagtgttgagaa----tgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaa 36848252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 2209123 - 2209040
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||| ||| ||| ||||||||    
T  2209123 gaagaaaaatctagtgttgagagagcatgttaagaatatgttattcacttaatctaatcattgaatcgaactttctcatggtgg 2209040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 39852267 - 39852188
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||| ||  | |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  39852267 aaaaatctagtgttgagggagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgg 39852188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 4374962 - 4375047
Alignment:
Q  80 aagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    ||||||||||||||||| | | | |||||||| |||||||||||||||||||| |||||||||||||||| ||| |||||||||||    
T  4374962 aagaaaaatctagtgttgaaagagcatgttaaaaatatgttcttcacttaatccaatcattgaatccaactttctcatggtggaaa 4375047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 10806406 - 10806487
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggt 160  Q
    ||||||||||||||| |||||| | |||||||||||||||||||| ||||||| ||||||||||||| ||| ||||||||||    
T  10806406 gaagaaaaatctagttttaagagagcatgttaagaatatgttctttacttaatttaatcattgaatcaaactttcccatggt 10806487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 4373803 - 4373728
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcc 154  Q
    ||||||||||||||||||  || |||||||||||||||||||||||||||||| |||||||||||| |||| ||||    
T  4373803 gaagaaaaatctagtgttgcgagaacatgttaagaatatgttcttcacttaatataatcattgaattcaactttcc 4373728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 35237376 - 35237293
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||| |||| || | | | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  35237376 gaagaaaaatttagtattgaaagagcatgttaagaatatgttattcacttaatctaatcattgaatccaactttcccatggtgg 35237293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 16880005 - 16879926
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    ||||||||||| | | || ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  16880005 gaagaaaaatcaaatattgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatg 16879926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 38778764 - 38778846
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| |  ||||||| ||||| |||||||||||||||||||||||||| |||| ||| |||||||    
T  38778764 gaagaaaaatctagtgttgagagagtatgttaaaaatatattcttcacttaatctaatcattgaatacaactttctcatggtg 38778846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 39852772 - 39852838
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatc 145  Q
    |||||||||||||||||| ||| | |||||||||||||| |||||||||||||||||| ||||||||    
T  39852772 gaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaataattgaatc 39852838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 102 - 162
Target Start/End: Complemental strand, 40907692 - 40907633
Alignment:
Q  102 aacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  40907692 aacatgttaagaatatgttcttcacttaatctaatcattgaat-caactttcccgtggtgg 40907633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 2209218 - 2209249
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  2209218 aaattctgtaattcatttattgaatgttagaa 2209249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 10806333 - 10806302
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  10806333 aaattctgtaattcatttattgaatgttagaa 10806302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 11998963 - 11998932
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  11998963 aaattctgtaattcatttattgaatgttagaa 11998932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 16889400 - 16889431
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  16889400 aaattctgtaattcatttattgaatgttagaa 16889431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 33113789 - 33113820
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  33113789 aaattctgtaattcatttattgaatgttagaa 33113820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 33114070 - 33114039
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  33114070 aaattctgtaattcatttattgaatgttagaa 33114039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 35237462 - 35237493
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  35237462 aaattctgtaattcatttattgaatgttagaa 35237493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 38778686 - 38778655
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  38778686 aaattctgtaattcatttattgaatgttagaa 38778655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 30115568 - 30115598
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  30115568 aaattctgtaattcatttattgaatgttaga 30115598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Original strand, 35237865 - 35237899
Alignment:
Q  111 agaatatgttcttcacttaatctaatcattgaatc 145  Q
    |||||||||||||||||||||||||| ||||||||    
T  35237865 agaatatgttcttcacttaatctaattattgaatc 35237899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 40309375 - 40309345
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  40309375 aaattctgtaattcatttattgaatgttaga 40309345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 43481153 - 43481123
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  43481153 aaattctgtaattcatttattgaatgttaga 43481123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 43591493 - 43591463
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  43591493 aattctgtaattcatttattgaatgttagaa 43591463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 65
Target Start/End: Original strand, 40907791 - 40907820
Alignment:
Q  36 aattctgtaattcatttattgaatgttaga 65  Q
    ||||||||||||||||||||||||||||||    
T  40907791 aattctgtaattcatttattgaatgttaga 40907820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 37374082 - 37373999
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  37374082 gaagaaaaatctagtgttgagaaaacatgttaagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgg 37373999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 31014454 - 31014368
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||| ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  31014454 gaagaaaaatttagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaa 31014368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 3945012 - 3944929
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3945012 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 3944929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 42356353 - 42356270
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42356353 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 42356270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 44868124 - 44868038
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  44868124 gaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaa 44868038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 19555387 - 19555308
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19555387 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcatttaatccaactttcccatg 19555308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 23584852 - 23584935
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23584852 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgg 23584935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 23599675 - 23599758
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  23599675 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttaccatggtgg 23599758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 25025733 - 25025816
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||    
T  25025733 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttctcttaatctaatcattgaatcaaactttcccatggtgg 25025816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 38575138 - 38575059
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  38575138 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcatttaatctaatcattgaatccaactttcccatg 38575059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 47737642 - 47737725
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47737642 gaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaatccaacattcccatggtgg 47737725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 50687677 - 50687760
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  50687677 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgg 50687760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 41875585 - 41875666
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggt 160  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  41875585 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaacccaactttcccatggt 41875666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 37374932 - 37374856
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttccc 155  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37374932 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttccc 37374856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 8427712 - 8427795
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||    
T  8427712 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatctaactttcccatggtgg 8427795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 23584354 - 23584271
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  23584354 gaagaaaaatctactgttgagagaacatgttaagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgg 23584271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 23599177 - 23599094
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||    
T  23599177 gaagaaaaatctactgttgagagaacatgttaagaatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgg 23599094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 29342458 - 29342375
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||  ||  | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29342458 gaagaaaaatctagtgtggagggagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 29342375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 37374575 - 37374650
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcc 154  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  37374575 gaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcc 37374650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 55281952 - 55281869
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||    
T  55281952 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatccaattttcccatggtgg 55281869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 44868588 - 44868670
Alignment:
Q  80 aagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||    
T  44868588 aagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaattttcccatggtgg 44868670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 49752390 - 49752312
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccat 157  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  49752390 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcctactttcccat 49752312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 29342964 - 29343041
Alignment:
Q  81 agaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  29342964 agaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatg 29343041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 49752879 - 49752960
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggt 160  Q
    |||||||||||||||||| ||| | |||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  49752879 gaagaaaaatctagtgttgagagagcatgttaaaaatatattcttcacttaatctaatcattgaatccaactttcccatggt 49752960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 146
Target Start/End: Original strand, 19555892 - 19555959
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatcc 146  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  19555892 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcc 19555959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 25025287 - 25025212
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  25025287 aaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttcccatg 25025212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 32672283 - 32672204
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| ||| | ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  32672283 gaagaaaaatctagtgttgagagagcatattaagaatatgttcttcacttaatctaatcattaaatccaactttcccatg 32672204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 37375437 - 37375520
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||| ||||||||| |||  |||||||    
T  37375437 gaagaaaaatctagtgttgagagaacatgttaagaagatgttcttcacttaatctaatcatcgaatccaactttcttatggtgg 37375520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 48218708 - 48218625
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||||    
T  48218708 gaagaaaaatctagtgttgagagagcatgttaagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgg 48218625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 55282390 - 55282473
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||  ||  | ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  55282390 gaagaaaaatctagtgtcgagggagcatgttaagaatatgttcttcacttaatctaatcattaaatccaactttcccatggtgg 55282473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 40887910 - 40887980
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| ||||    
T  40887910 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatacaac 40887980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 24220696 - 24220627
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa 148  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  24220696 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgaatccaa 24220627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 31014893 - 31014968
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcc 154  Q
    |||||||||| ||||||| ||| | |||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  31014893 gaagaaaaatttagtgttgagagagcatggtaagaatatgttcttcacttaatctaatcattgaatccaactttcc 31014968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 38575611 - 38575690
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    ||||||||||||| |||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  38575611 gaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaacttttccatg 38575690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 43658864 - 43658943
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    ||||||||||||| |||| | | | | |||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43658864 gaagaaaaatctaatgttgaaagagcctgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 43658943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 32672752 - 32672822
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||| ||||||||    
T  32672752 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcgcttaatctaatcattaaatccaac 32672822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 47737180 - 47737110
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    ||||||||||||||| || ||| ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  47737180 gaagaaaaatctagtattgagagaacatgttaagaatatgttctccacttaatctaatcgttgaatccaac 47737110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 48219204 - 48219286
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||| ||||||||| ||| | |||||||||||||| ||| ||||||||||||||||||||||||||  |||||||||||    
T  48219204 gaagaaaagtctagtgttgagagagcatgttaagaatatattcatcacttaatctaatcattgaatccaattttcccatggtg 48219286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 50675094 - 50675172
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccat 157  Q
    |||||||||||||||||| |||   |||||||| |||||||||||||||||||||||||||||||| |||| |||||||    
T  50675094 gaagaaaaatctagtgttgagagtgcatgttaataatatgttcttcacttaatctaatcattgaattcaactttcccat 50675172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 24221141 - 24221216
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcc 154  Q
    |||||||||||||||||| ||| | |||||||||||| ||||||||||||||| |||||||| |||||||| ||||    
T  24221141 gaagaaaaatctagtgttgagagagcatgttaagaatgtgttcttcacttaatataatcattaaatccaactttcc 24221216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 8427333 - 8427269
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaa 143  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||| |||||||||||||||||    
T  8427333 gaagaaaaatctagtgttgagagagcatgataagaatatgttcttcatttaatctaatcattgaa 8427269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 43104016 - 43103933
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||| |||| || | | | ||||||||||||||||| ||||||||||| |||| ||||||||||| |||| |||||||    
T  43104016 gaagaaaaatatagtattgaaagagcatgttaagaatatgttattcacttaatccaatcgttgaatccaactttcctatggtgg 43103933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 3945478 - 3945527
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcactt 128  Q
    |||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  3945478 gaagaaaaatctagtgttgagagaacatgttaaaaatatgttcttcactt 3945527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 50674741 - 50674663
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||| ||| |||||||||| |||||||||||||     |||||||| ||||||||||||    
T  50674741 gaagaaaaatctagtgttgagagagcatgctaaaaatatgttctacacttaatctaat-----aatccaactttcccatggtgg 50674663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 8427615 - 8427584
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  8427615 aaattctgtaattcatttattgaatgttagaa 8427584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 23584755 - 23584724
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  23584755 aaattctgtaattcatttattgaatgttagaa 23584724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 23599578 - 23599547
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  23599578 aaattctgtaattcatttattgaatgttagaa 23599547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 25025379 - 25025410
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  25025379 aaattctgtaattcatttattgaatgttagaa 25025410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 29342546 - 29342577
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  29342546 aaattctgtaattcatttattgaatgttagaa 29342577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 29342865 - 29342834
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  29342865 aaattctgtaattcatttattgaatgttagaa 29342834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 32672368 - 32672399
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  32672368 aaattctgtaattcatttattgaatgttagaa 32672399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 37374169 - 37374200
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  37374169 aaattctgtaattcatttattgaatgttagaa 37374200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 37375344 - 37375313
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  37375344 aaattctgtaattcatttattgaatgttagaa 37375313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 43104096 - 43104127
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  43104096 aaattctgtaattcatttattgaatgttagaa 43104127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 44868491 - 44868460
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  44868491 aaattctgtaattcatttattgaatgttagaa 44868460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 48218795 - 48218826
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  48218795 aaattctgtaattcatttattgaatgttagaa 48218826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 48219118 - 48219087
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  48219118 aaattctgtaattcatttattgaatgttagaa 48219087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 49752478 - 49752509
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  49752478 aaattctgtaattcatttattgaatgttagaa 49752509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 3945099 - 3945129
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  3945099 aaattctgtaattcatttattgaatgttaga 3945129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 19555803 - 19555773
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  19555803 aaattctgtaattcatttattgaatgttaga 19555773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 32672656 - 32672626
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  32672656 aaattctgtaattcatttattgaatgttaga 32672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 38575233 - 38575263
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  38575233 aaattctgtaattcatttattgaatgttaga 38575263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 43658429 - 43658459
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  43658429 aattctgtaattcatttattgaatgttagaa 43658459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 43658777 - 43658747
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  43658777 aaattctgtaattcatttattgaatgttaga 43658747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 50687290 - 50687320
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  50687290 aaattctgtaattcatttattgaatgttaga 50687320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 42356778 - 42356843
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaat 144  Q
    |||||||||||||||||| ||| |  ||| || |||||| || |||| ||||||||||||||||||    
T  42356778 gaagaaaaatctagtgttgagagagaatgctaggaatatattattcatttaatctaatcattgaat 42356843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 165
Target Start/End: Complemental strand, 50687182 - 50687133
Alignment:
Q  116 atgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    ||||| ||||||||||||||| |||||||||||| ||| ||| |||||||    
T  50687182 atgttattcacttaatctaattattgaatccaactttctcatagtggaaa 50687133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 37374499 - 37374471
Alignment:
Q  35 aaattctgtaattcatttattgaatgtta 63  Q
    |||||||||||||||||||||||||||||    
T  37374499 aaattctgtaattcatttattgaatgtta 37374471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 40887488 - 40887516
Alignment:
Q  35 aaattctgtaattcatttattgaatgtta 63  Q
    |||||||||||||||||||||||||||||    
T  40887488 aaattctgtaattcatttattgaatgtta 40887516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 11382 - 11296
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11382 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaa 11296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 2e-32; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 5523317 - 5523231
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  5523317 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcctatggtggaaa 5523231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 30610827 - 30610742
Alignment:
Q  80 aagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  30610827 aagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaattttcccatggtggaaa 30610742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 6032275 - 6032192
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  6032275 gaagaaaaatctagtcttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatagtgg 6032192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 30611314 - 30611397
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  30611314 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcagttaatctaatcattgaatccaactttcccatggtgg 30611397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 33668338 - 33668255
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  33668338 gaagaaaaatctagtgttgagagagcatattaagaatatgttcttcacttaatttaatcattgaatccaactttcccatggtgg 33668255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 6032722 - 6032804
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||    
T  6032722 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttctcatggtg 6032804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 12809671 - 12809748
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttccca 156  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12809671 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttccca 12809748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 5523815 - 5523898
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||| || ||| | |||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||    
T  5523815 gaagaaaaatctagtcttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatcaaactttccaatggtgg 5523898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 12809186 - 12809111
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcc 154  Q
    |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  12809186 gaagaaaaatctagtgttgagagaacttgttaagaatatgttcttcacttaatctaatcattgcatccaactttcc 12809111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 13936609 - 13936692
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||| |||||||||||||||||| || ||| ||||||||||||    
T  13936609 gaagaaaaatctagtgttgagagagcatgttaagaatatgttctttacttaatctaatcattgactctaactttcccatggtgg 13936692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 13944407 - 13944328
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  13944407 gaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcatttaatctaatcattgaattcaactttcccatg 13944328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 33668800 - 33668882
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||| || | |||||||    
T  33668800 gaagaaaaatctagtgttgagaaa-catgttaaaaatatattcttcacttaatctaatcattgaatccaacttttctatggtgg 33668882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 31723950 - 31723860
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggt-ggaaagga 168  Q
    |||||||| ||||||| | ||| | ||||||||||||||||||||||||||||||||||||| |||||||  |||||||||| ||||||||    
T  31723950 gaagaaaattctagtgctgagagagcatgttaagaatatgttcttcacttaatctaatcattaaatccaaatttcccatggtaggaaagga 31723860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 33648132 - 33648214
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| | | |||| ||||||||||| |||||||||||||  |||||||||||||||  |||| ||||||    
T  33648132 gaagaaaaatctagtgttgaaagaacacgttaagaatatattcttcacttaattcaatcattgaatccaattttcctatggtg 33648214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 31724417 - 31724494
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatc-taatcattgaatccaaccttccc 155  Q
    |||||||||||| ||||| | | | |||||||||||||| ||||||||||||||  |||||||||||||||| |||||    
T  31724417 gaagaaaaatcttgtgttgaaagagcatgttaagaatatattcttcacttaatcaaaatcattgaatccaactttccc 31724494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 5523415 - 5523446
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  5523415 aaattctgtaattcatttattgaatgttagaa 5523446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 6032349 - 6032380
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  6032349 aaattctgtaattcatttattgaatgttagaa 6032380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 6032636 - 6032605
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  6032636 aaattctgtaattcatttattgaatgttagaa 6032605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 33648044 - 33648013
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  33648044 aaattctgtaattcatttattgaatgttagaa 33648013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 33668426 - 33668457
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  33668426 aaattctgtaattcatttattgaatgttagaa 33668457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 12809586 - 12809556
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  12809586 aaattctgtaattcatttattgaatgttaga 12809556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 30611230 - 30611200
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  30611230 aattctgtaattcatttattgaatgttagaa 30611200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 33668704 - 33668674
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  33668704 aaattctgtaattcatttattgaatgttaga 33668674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 13944485 - 13944514
Alignment:
Q  35 aaattctgtaattcatttattgaatgttag 64  Q
    ||||||||||||||||||||||||||||||    
T  13944485 aaattctgtaattcatttattgaatgttag 13944514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 1e-30; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 4894616 - 4894533
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  4894616 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgg 4894533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 36682952 - 36682869
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36682952 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 36682869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 47814604 - 47814687
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47814604 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 47814687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 4895051 - 4895137
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  4895051 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaactttcccatggtggaaa 4895137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 22275541 - 22275459
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  22275541 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caactttcccatggtgg 22275459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 34853508 - 34853425
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  34853508 gaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgg 34853425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 36683433 - 36683516
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36683433 gaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 36683516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 47814088 - 47814005
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  47814088 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgg 47814005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 19816861 - 19816947
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  19816861 gaagaaaaatctagtgttgagagagcatgttaaaaatatgttcttcacttaatctaatcatttaatccaactttcccatggtggaaa 19816947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 82 - 158
Target Start/End: Complemental strand, 32499363 - 32499287
Alignment:
Q  82 gaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32499363 gaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 32499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 18520974 - 18520899
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcc 154  Q
    |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18520974 gaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcc 18520899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 19816381 - 19816298
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||    
T  19816381 gaagaaaaatctagtgttgagagagcatgttaagaatatgttttacacttaatctaatcattgaatccaactttcccatggtgg 19816298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 24044012 - 24044095
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||    
T  24044012 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaataaaactttcccatggtgg 24044095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 42456485 - 42456568
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||| ||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  42456485 gaagaaaaatcttgtgttgagagaacatgttaaaaatatgttcttcacttaatgtaatcattgaatccaactttcccatggtgg 42456568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 33806086 - 33806000
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  33806086 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaacttttccatggtggaaa 33806000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 46815032 - 46815114
Alignment:
Q  80 aagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||| |||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  46815032 aagaaaaatctaatgttgagagagcatgttaagaatatgttcttcatttaatctaatcattgaatccaactttcccatggtgg 46815114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 24323951 - 24324020
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa 148  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  24323951 gaagaaaaatctagtgttcagagaacatgttaagaatatgttcttcacttaatctaattattgaatccaa 24324020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 83 - 155
Target Start/End: Original strand, 32499845 - 32499917
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttccc 155  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32499845 aaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttccc 32499917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 22276045 - 22276128
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | | |||||||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  22276045 gaagaaaaatctagtgttgaaagagcatgttaaaaatatgttcttcatttaatctaatcattgaatccaactttcccatggtgg 22276128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 30711905 - 30711822
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||    
T  30711905 gaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaacttttccatggtgg 30711822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 34853965 - 34854048
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| || ||| |||| |||||||    
T  34853965 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactttcctatggtgg 34854048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 42456038 - 42455955
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||  ||||| ||||||    
T  42456038 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatttaatcattgaatccaattttcccgtggtgg 42455955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 27855682 - 27855600
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||||||| |||| ||| ||||||||    
T  27855682 gaagaaaaatctagtgttgagagagcatgataagaatatgttcttcacttaatctaatcattgaat-caactttctcatggtgg 27855600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 46732684 - 46732601
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| |  |||||||||||||||| |||||||||||||||||||||||||||| || |||| ||||    
T  46732684 gaagaaaaatctagtgttgagagagaatgttaagaatatgttattcacttaatctaatcattgaatccaacttttccatagtgg 46732601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 46814522 - 46814439
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||| |||| | | | |||||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||    
T  46814522 gaagaaaaatctaatgttgaaagagcatgttaagaatatgttcttcacttaatctaatcgttgaattcaactttcccatggtgg 46814439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 36620710 - 36620779
Alignment:
Q  80 aagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    ||||||||||||||||| ||  | |||||||| |||||||||||||||||||||||||||||||||||||    
T  36620710 aagaaaaatctagtgttgagtgagcatgttaataatatgttcttcacttaatctaatcattgaatccaac 36620779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 27856112 - 27856165
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatc 132  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  27856112 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatc 27856165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 46012914 - 46012978
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa 148  Q
    |||||||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  46012914 aaaaatctagtgttgagagagcatgttaa-aatatgttcttcacttaatctaatcattgaatccaa 46012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 158
Target Start/End: Complemental strand, 36620231 - 36620156
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||| | | | |||||||| |||||||| |||||||||| |||||||||||| |||| ||| ||||    
T  36620231 aaaaatctagtgttgaaagagcatgttaataatatgtttttcacttaatttaatcattgaattcaactttctcatg 36620156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 4894704 - 4894735
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  4894704 aaattctgtaattcatttattgaatgttagaa 4894735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 22275960 - 22275929
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  22275960 aaattctgtaattcatttattgaatgttagaa 22275929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 24043926 - 24043895
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  24043926 aaattctgtaattcatttattgaatgttagaa 24043895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 24323865 - 24323834
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  24323865 aaattctgtaattcatttattgaatgttagaa 24323834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 27855768 - 27855799
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  27855768 aaattctgtaattcatttattgaatgttagaa 27855799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 27856016 - 27855985
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  27856016 aaattctgtaattcatttattgaatgttagaa 27855985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 32499458 - 32499489
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  32499458 aaattctgtaattcatttattgaatgttagaa 32499489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 32499740 - 32499709
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  32499740 aaattctgtaattcatttattgaatgttagaa 32499709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 33806173 - 33806204
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  33806173 aaattctgtaattcatttattgaatgttagaa 33806204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 34853594 - 34853625
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  34853594 aaattctgtaattcatttattgaatgttagaa 34853625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 36620612 - 36620581
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  36620612 aaattctgtaattcatttattgaatgttagaa 36620581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 36683048 - 36683079
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  36683048 aaattctgtaattcatttattgaatgttagaa 36683079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 42456103 - 42456134
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  42456103 aaattctgtaattcatttattgaatgttagaa 42456134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 42456385 - 42456354
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  42456385 aaattctgtaattcatttattgaatgttagaa 42456354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 46732783 - 46732814
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  46732783 aaattctgtaattcatttattgaatgttagaa 46732814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 4894965 - 4894935
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  4894965 aattctgtaattcatttattgaatgttagaa 4894935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Original strand, 19816468 - 19816498
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  19816468 aaattctgtaattcatttattgaatgttaga 19816498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 34853872 - 34853842
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  34853872 aattctgtaattcatttattgaatgttagaa 34853842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 65
Target Start/End: Complemental strand, 18521346 - 18521317
Alignment:
Q  36 aattctgtaattcatttattgaatgttaga 65  Q
    ||||||||||||||||||||||||||||||    
T  18521346 aattctgtaattcatttattgaatgttaga 18521317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 36 - 65
Target Start/End: Original strand, 30711981 - 30712010
Alignment:
Q  36 aattctgtaattcatttattgaatgttaga 65  Q
    ||||||||||||||||||||||||||||||    
T  30711981 aattctgtaattcatttattgaatgttaga 30712010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 1e-30; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 3957617 - 3957534
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3957617 gaagaaaaatctagtgttgagagaacatattaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 3957534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 4929475 - 4929561
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4929475 gaagaaaaatctagtgttgagagagcatgttaaaaatatattcttcacttaatctaatcattgaatccaactttcccatggtggaaa 4929561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 28075938 - 28076024
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | |||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||    
T  28075938 gaagaaaaatctagtgttgagagagcatgttaagaatatatttttcacttaatctaatcattgaatccaactttcccatggtggaaa 28076024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 4928988 - 4928905
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||| || | |||||||    
T  4928988 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattaaatccaacttttctatggtgg 4928905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 33430159 - 33430084
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcc 154  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  33430159 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcc 33430084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 42408534 - 42408613
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  42408534 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaacttttccatg 42408613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 3739632 - 3739702
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  3739632 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 3739702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 26687617 - 26687531
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    ||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  26687617 gaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaa 26687531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 26957348 - 26957262
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    ||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||    
T  26957348 gaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaa 26957262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 5324372 - 5324453
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggt 160  Q
    |||||||||| ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  5324372 gaagaaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttctcatggt 5324453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 21770115 - 21770025
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaacc----ttcccatggtggaaa 165  Q
    |||||||||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  21770115 gaagaaaaatttaatgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccaactttcccatggtggaaa 21770025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 8813652 - 8813738
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    ||||| |||||||||||  ||| | |||||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  8813652 gaagacaaatctagtgtagagagagcatgttaagaatatgttctttacttaatctaatcattgaatccaactttcccatgatggaaa 8813738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 3739117 - 3739038
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    |||||||||||||||||| ||| |  ||||||||||||| || |||||||||||||||||||||||||||| ||||||||    
T  3739117 gaagaaaaatctagtgttgagagagtatgttaagaatatatttttcacttaatctaatcattgaatccaactttcccatg 3739038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 42408109 - 42408026
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||| | || ||| |||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||    
T  42408109 gaagaaaaatctaatattgagagaacatgttaagaatatgttcttcatttaatctaatcattgaatccaattttcccatagtgg 42408026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 13738176 - 13738099
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccat 157  Q
    |||||||||||||||||| | || |||||| ||||||||||||||||||||||| |||||||||||||||| |||||||    
T  13738176 gaagaaaaatctagtgttga-aagacatgtaaagaatatgttcttcacttaatccaatcattgaatccaactttcccat 13738099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 26688030 - 26688092
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatc 145  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||| |||||||||||||    
T  26688030 aaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatataatcattgaatc 26688092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 26957761 - 26957823
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatc 145  Q
    |||||||||||||| ||| | |||||||||||||||||||||||||||| |||||||||||||    
T  26957761 aaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatataatcattgaatc 26957823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 79 - 154
Target Start/End: Original strand, 3958103 - 3958178
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcc 154  Q
    |||||||||| ||||||| ||| |  ||||||| |||||||||||||||||||||||| |||||||| ||| ||||    
T  3958103 gaagaaaaatttagtgttgagagagtatgttaaaaatatgttcttcacttaatctaattattgaatcaaactttcc 3958178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 3739205 - 3739236
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  3739205 aaattctgtaattcatttattgaatgttagaa 3739236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 3739546 - 3739515
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  3739546 aaattctgtaattcatttattgaatgttagaa 3739515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 4929083 - 4929114
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  4929083 aaattctgtaattcatttattgaatgttagaa 4929114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 8813258 - 8813289
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  8813258 aaattctgtaattcatttattgaatgttagaa 8813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 8813563 - 8813532
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  8813563 aaattctgtaattcatttattgaatgttagaa 8813532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 4929389 - 4929359
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  4929389 aaattctgtaattcatttattgaatgttaga 4929359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 28075840 - 28075810
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  28075840 aaattctgtaattcatttattgaatgttaga 28075810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 1e-30; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 27797234 - 27797151
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27797234 gaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaaccttcccatggtgg 27797151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 43368307 - 43368224
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  43368307 gaagaaaaatctagtgttaagagaacatgttaagaatatgttcttcacttaatttaatcattgaatctaacattcccatggtgg 43368224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 43368804 - 43368887
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  43368804 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaatacaactttcccatggtgg 43368887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 1403657 - 1403739
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  1403657 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caactttcccatggtgg 1403739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 42839517 - 42839600
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  42839517 gaagaaaaatctagtgttgagagatcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggtgg 42839600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 49533860 - 49533777
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  49533860 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccgtggtgg 49533777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 8560273 - 8560187
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  8560273 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatctttgaatccaacattcccatggtggaaa 8560187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 7219617 - 7219686
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa 148  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7219617 gaagaaaaatctagtgtttagagaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa 7219686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 1403157 - 1403074
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||| || | | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1403157 gaagaaaaatctagtattgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 1403074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 27816973 - 27817056
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||    
T  27816973 gaagaaaaatctagtgttgagagagcatgttaggaatatgttcttcacttaatctaatcattgaatccaacttttccatggtgg 27817056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 42839054 - 42838971
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||    
T  42839054 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactttcccatggtgg 42838971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 48843931 - 48844010
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatg 158  Q
    ||||||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48843931 gaagaaaaatctaatgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatg 48844010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 27797705 - 27797791
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||| || ||| ||||||| |||||||    
T  27797705 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgactctaactttcccatagtggaaa 27797791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 48843697 - 48843615
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||||||    
T  48843697 gaagaaaaatctagtgttgagagaacatgttaagaatatgttattcacttaatataatcattgaatccaactttcctatggtg 48843615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 52859757 - 52859847
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatgg-tggaaagga 168  Q
    |||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||    
T  52859757 gaagaaaaatctggtgttgagagagcatgttaagaatatgttcttcacttaatctaatcattgaattcaactttcccatggttggaaagga 52859847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 6287737 - 6287672
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaat 144  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  6287737 gaagaaaaatctagtgttgagagaacatgttaagaatatgttcttcacttaatctaatcattgaat 6287672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 7219125 - 7219048
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttccca 156  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  7219125 gaagaaaaatctagtgttgagaaagcatgttaagaatatattcttcatttaatctaatcattgaatccaactttccca 7219048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 8560712 - 8560794
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||    
T  8560712 gaagaaaaatctagtgttgaaagaacatgttaagaatatgttcttcacttaatctaatcattgaat-caacttttccatggtgg 8560794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 27934264 - 27934349
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||    
T  27934264 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttctcttaatctaatcattg-atccaactttcccatgttggaaa 27934349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 41563296 - 41563210
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| | ||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||| ||||    
T  41563296 gaagaaaaatctagtgttgagagagcatgttaagaatacgttcttcatttaatctaataattgaatccaactttcccatggtagaaa 41563210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 41563761 - 41563831
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||| ||||||||||||    
T  41563761 gaagaaaaatctagtgttgagagagcatgttaagaatatgttcttcacttaatctaataattgaatccaac 41563831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 165
Target Start/End: Original strand, 42840282 - 42840368
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| ||| |  ||||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||    
T  42840282 gaagaaaaatctagtgttgagagattatgttaaaaatatgttcttcacttaatctaatcattgaattcaactttcccatagtggaaa 42840368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 48369599 - 48369513
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtggaaa 165  Q
    |||||||||||||||||| | | | ||||||||||||||||||||||||||||| |||||||||||||||| |||| || |||||||    
T  48369599 gaagaaaaatctagtgttgaaagagcatgttaagaatatgttcttcacttaatccaatcattgaatccaactttcctatagtggaaa 48369513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 51247945 - 51247876
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaa 148  Q
    |||||||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  51247945 gaagaaaaatctagtgttgagagagcatgttaagaatatattcttcacttaatctaatcattgaatccaa 51247876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 51248452 - 51248535
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||| |||||||| ||| || |||||||||    
T  51248452 gaagaaaaatctagtgttgagagagtatgttaagaatatgttcttcacttaatctaattattgaatcaaacttttccatggtgg 51248535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 149
Target Start/End: Original strand, 6288173 - 6288243
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||| ||||||| | | | ||||||||||||||||||||||||||||||||||||||||||||||    
T  6288173 gaagaaaaatttagtgttgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaac 6288243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 37725496 - 37725426
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaac 149  Q
    |||||||||||||||||| ||| |  |||||||||||||||||||||||||||||||| ||||||||||||    
T  37725496 gaagaaaaatctagtgttgagagagtatgttaagaatatgttcttcacttaatctaatgattgaatccaac 37725426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 42839814 - 42839735
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||| ||||||| ||| | |||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  42839814 aaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgg 42839735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 49534365 - 49534448
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||| |||||||| ||| | |||| |||||||||||| || ||||||||||||||||||||||||| || |||||||||    
T  49534365 gaagaaaaacctagtgttgagagagcatgataagaatatgtttttaacttaatctaatcattgaatccaacttttccatggtgg 49534448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 7782660 - 7782750
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggt-ggaaagga 168  Q
    ||||||||||||| |||| | | | |||| |||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||||||||    
T  7782660 gaagaaaaatctaatgttgaaagagcatgataagaatatgttcttcacttgatccaatcattgaatccaactttcccatggtaggaaagga 7782750  T

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Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 52859265 - 52859189
Alignment:
Q  80 aagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttccca 156  Q
    |||||||||||| || | ||| | ||||||||||||||||| |||| ||||||||||||||||||| ||| ||||||    
T  52859265 aagaaaaatctaatgatgagagagcatgttaagaatatgttattcatttaatctaatcattgaatctaactttccca 52859189  T

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Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 37725672 - 37725708
Alignment:
Q  112 gaatatgttcttcacttaatctaatcattgaatccaa 148  Q
    |||||| ||||||||||||||||||||||||||||||    
T  37725672 gaatatattcttcacttaatctaatcattgaatccaa 37725708  T

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Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 8560359 - 8560390
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  8560359 aaattctgtaattcatttattgaatgttagaa 8560390  T

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Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 41563672 - 41563641
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  41563672 aaattctgtaattcatttattgaatgttagaa 41563641  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 43368394 - 43368425
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  43368394 aaattctgtaattcatttattgaatgttagaa 43368425  T

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Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 43368716 - 43368685
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  43368716 aaattctgtaattcatttattgaatgttagaa 43368685  T

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Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 48843857 - 48843826
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  48843857 aaattctgtaattcatttattgaatgttagaa 48843826  T

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Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 49534277 - 49534246
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  49534277 aaattctgtaattcatttattgaatgttagaa 49534246  T

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Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 51248365 - 51248334
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  51248365 aaattctgtaattcatttattgaatgttagaa 51248334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Complemental strand, 52859669 - 52859638
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  52859669 aaattctgtaattcatttattgaatgttagaa 52859638  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 65
Target Start/End: Complemental strand, 7219530 - 7219500
Alignment:
Q  35 aaattctgtaattcatttattgaatgttaga 65  Q
    |||||||||||||||||||||||||||||||    
T  7219530 aaattctgtaattcatttattgaatgttaga 7219500  T

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Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 27797613 - 27797583
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  27797613 aattctgtaattcatttattgaatgttagaa 27797583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 42839147 - 42839177
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  42839147 aattctgtaattcatttattgaatgttagaa 42839177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 42839910 - 42839940
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  42839910 aattctgtaattcatttattgaatgttagaa 42839940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Original strand, 52859362 - 52859392
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  52859362 aattctgtaattcatttattgaatgttagaa 52859392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 64
Target Start/End: Complemental strand, 6288084 - 6288055
Alignment:
Q  35 aaattctgtaattcatttattgaatgttag 64  Q
    ||||||||||||||||||||||||||||||    
T  6288084 aaattctgtaattcatttattgaatgttag 6288055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 66
Target Start/End: Original strand, 48843778 - 48843806
Alignment:
Q  38 ttctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||    
T  48843778 ttctgtaattcatttattgaatgttagaa 48843806  T

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Target: scaffold0229 (Bit Score: 60; Significance: 8e-26; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 15202 - 15285
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    ||||||||||||||| || | | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15202 gaagaaaaatctagtattgaaagagcatgttaagaatatgttcttcacttaatctaatcattgaatccaactttcccatggtgg 15285  T

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Target: scaffold1095 (Bit Score: 55; Significance: 8e-23; HSPs: 2)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 79 - 161
Target Start/End: Complemental strand, 1602 - 1520
Alignment:
Q  79 gaagaaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtg 161  Q
    |||||||||||||||||| ||| | |||| |||||||||||| |||||||||||||||||||||||||||| || ||||||||    
T  1602 gaagaaaaatctagtgttgagagagcatgctaagaatatgttattcacttaatctaatcattgaatccaacttttccatggtg 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1095; HSP #2
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 35 - 66
Target Start/End: Original strand, 1677 - 1708
Alignment:
Q  35 aaattctgtaattcatttattgaatgttagaa 66  Q
    ||||||||||||||||||||||||||||||||    
T  1677 aaattctgtaattcatttattgaatgttagaa 1708  T

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Target: scaffold0368 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 11757 - 11836
Alignment:
Q  83 aaaaatctagtgttaagaaaacatgttaagaatatgttcttcacttaatctaatcattgaatccaaccttcccatggtgg 162  Q
    |||||| ||||||| ||| | |||||||||||||||||||||||||||||| |||||||| || ||| ||||||||||||    
T  11757 aaaaatttagtgttgagagagcatgttaagaatatgttcttcacttaatctgatcattgactctaactttcccatggtgg 11836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 66
Target Start/End: Complemental strand, 11661 - 11631
Alignment:
Q  36 aattctgtaattcatttattgaatgttagaa 66  Q
    |||||||||||||||||||||||||||||||    
T  11661 aattctgtaattcatttattgaatgttagaa 11631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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