View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19178_high_11 (Length: 274)
Name: NF19178_high_11
Description: NF19178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19178_high_11 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 5076545 - 5076281
Alignment:
| Q |
10 |
attattctagtgttgtggttagttttcatggtcaaactaactcacattgcattcttatgttcaaatcttttagaaattcttatgaacactaaacacttcg |
109 |
Q |
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| T |
5076545 |
attattctagtgttgtggttagctttcatggtcaaacttactcacattgcattcttatattcaaatcttttagaaattcttacgaacactaaacacttcg |
5076446 |
T |
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| Q |
110 |
aatctttttccataaagatgatgtttccacatcttaagtgtaaacatttgaacatttttgctcataattccaaattataagtcatgtaattatgtcaatg |
209 |
Q |
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| T |
5076445 |
aatctttttccataaagatgatgtttccacatcttaagtgtaaacatttgaacatttttgctcataattccaaattataagtcatgtaattatgtcaatg |
5076346 |
T |
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| Q |
210 |
tatctttaacttcctcgatgcacatgaaactatgtaatacatgtagttcaagttcttctagaatt |
274 |
Q |
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| T |
5076345 |
tatctttaacttcctcgatgcacatgaaactatgtaactcatgtagttcaagttcttctagaatt |
5076281 |
T |
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