View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19178_high_4 (Length: 492)

Name: NF19178_high_4
Description: NF19178
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19178_high_4
NF19178_high_4
[»] chr8 (43 HSPs)
chr8 (1-492)||(12985113-12985604)
chr8 (277-341)||(7658460-7658524)
chr8 (288-336)||(31236580-31236628)
chr8 (279-345)||(34897084-34897150)
chr8 (281-327)||(37225755-37225801)
chr8 (287-336)||(3508059-3508108)
chr8 (288-337)||(12606831-12606880)
chr8 (288-337)||(14134707-14134756)
chr8 (277-337)||(4786340-4786400)
chr8 (288-344)||(13844591-13844647)
chr8 (278-326)||(40063949-40063997)
chr8 (288-327)||(29198491-29198530)
chr8 (279-337)||(31548295-31548353)
chr8 (288-345)||(3677794-3677851)
chr8 (288-337)||(11927088-11927137)
chr8 (290-339)||(22493504-22493553)
chr8 (288-345)||(26434188-26434245)
chr8 (288-321)||(29447128-29447161)
chr8 (288-344)||(3025559-3025615)
chr8 (281-321)||(14227223-14227263)
chr8 (288-332)||(16987920-16987964)
chr8 (288-344)||(33405379-33405435)
chr8 (287-327)||(34201058-34201098)
chr8 (288-339)||(11803267-11803318)
chr8 (298-337)||(18964195-18964234)
chr8 (280-327)||(22770962-22771009)
chr8 (277-332)||(24362209-24362264)
chr8 (281-332)||(26466555-26466606)
chr8 (277-336)||(39954282-39954341)
chr8 (289-344)||(40332200-40332255)
chr8 (294-345)||(42874536-42874587)
chr8 (278-336)||(4611532-4611590)
chr8 (279-337)||(20679397-20679455)
chr8 (288-334)||(27213555-27213601)
chr8 (288-337)||(11944673-11944722)
chr8 (275-332)||(20785472-20785529)
chr8 (288-344)||(37283807-37283861)
chr8 (288-344)||(4948660-4948716)
chr8 (288-332)||(8798838-8798882)
chr8 (290-322)||(10441213-10441245)
chr8 (288-344)||(18646180-18646236)
chr8 (287-335)||(28819198-28819246)
chr8 (288-344)||(38278170-38278226)
[»] chr6 (62 HSPs)
chr6 (236-344)||(9658835-9658943)
chr6 (278-344)||(7377977-7378043)
chr6 (290-344)||(13364700-13364754)
chr6 (288-345)||(7265587-7265644)
chr6 (288-337)||(9617442-9617491)
chr6 (289-337)||(9629392-9629440)
chr6 (277-344)||(19040349-19040416)
chr6 (288-334)||(30866149-30866195)
chr6 (288-337)||(9025496-9025545)
chr6 (277-337)||(20371112-20371172)
chr6 (287-339)||(32299282-32299334)
chr6 (288-344)||(33001284-33001340)
chr6 (277-344)||(5732505-5732572)
chr6 (290-337)||(9024178-9024225)
chr6 (230-333)||(26562639-26562742)
chr6 (291-345)||(10335370-10335424)
chr6 (287-325)||(29049892-29049930)
chr6 (279-324)||(4859128-4859173)
chr6 (288-337)||(7086803-7086852)
chr6 (288-337)||(26178683-26178732)
chr6 (288-344)||(31579222-31579276)
chr6 (288-337)||(33340947-33340996)
chr6 (275-344)||(34172188-34172257)
chr6 (288-337)||(35125102-35125151)
chr6 (278-318)||(2117074-2117114)
chr6 (277-337)||(9027175-9027235)
chr6 (291-335)||(10157995-10158039)
chr6 (277-333)||(10842529-10842585)
chr6 (281-337)||(11784218-11784274)
chr6 (287-339)||(15443702-15443754)
chr6 (288-344)||(21924930-21924986)
chr6 (288-327)||(5462694-5462733)
chr6 (287-326)||(34446572-34446611)
chr6 (287-321)||(2140499-2140533)
chr6 (275-337)||(7996380-7996442)
chr6 (275-337)||(8022359-8022421)
chr6 (275-337)||(10294102-10294164)
chr6 (291-337)||(13360374-13360420)
chr6 (279-333)||(31115484-31115538)
chr6 (288-321)||(43724-43757)
chr6 (279-344)||(122102-122167)
chr6 (294-343)||(6751878-6751927)
chr6 (288-337)||(9195756-9195805)
chr6 (292-333)||(11591876-11591917)
chr6 (277-322)||(17341681-17341726)
chr6 (288-337)||(19044472-19044521)
chr6 (289-334)||(26314639-26314684)
chr6 (277-337)||(28862118-28862179)
chr6 (288-344)||(30851610-30851664)
chr6 (288-337)||(32320671-32320720)
chr6 (288-337)||(34073349-34073398)
chr6 (281-326)||(34895047-34895092)
chr6 (288-344)||(426509-426565)
chr6 (281-325)||(2493428-2493472)
chr6 (281-337)||(7151413-7151469)
chr6 (280-324)||(10031570-10031614)
chr6 (288-344)||(12627572-12627628)
chr6 (278-326)||(13689206-13689254)
chr6 (285-313)||(29601484-29601512)
chr6 (287-339)||(29711269-29711321)
chr6 (262-322)||(34290094-34290154)
chr6 (288-344)||(34595142-34595198)
[»] chr4 (56 HSPs)
chr4 (287-341)||(43299969-43300023)
chr4 (280-339)||(18513241-18513300)
chr4 (287-341)||(43300623-43300677)
chr4 (288-337)||(33950144-33950193)
chr4 (273-344)||(8423713-8423784)
chr4 (280-334)||(14465299-14465353)
chr4 (287-326)||(5654604-5654643)
chr4 (287-326)||(10546155-10546194)
chr4 (279-326)||(31243561-31243608)
chr4 (296-343)||(40224494-40224541)
chr4 (279-337)||(5775360-5775418)
chr4 (277-339)||(7012063-7012125)
chr4 (289-339)||(11110212-11110262)
chr4 (279-337)||(56049876-56049933)
chr4 (288-337)||(7214524-7214573)
chr4 (288-321)||(12077836-12077869)
chr4 (277-326)||(20743291-20743340)
chr4 (288-321)||(24613719-24613752)
chr4 (281-322)||(26276026-26276067)
chr4 (280-325)||(34589720-34589765)
chr4 (277-337)||(35723386-35723447)
chr4 (277-334)||(40613447-40613504)
chr4 (290-322)||(2234260-2234292)
chr4 (277-325)||(20521863-20521911)
chr4 (281-337)||(21345535-21345591)
chr4 (279-327)||(22440612-22440660)
chr4 (288-344)||(29205452-29205508)
chr4 (289-337)||(30103359-30103406)
chr4 (280-344)||(46715469-46715533)
chr4 (288-344)||(54580018-54580074)
chr4 (288-327)||(903930-903969)
chr4 (287-322)||(19230326-19230361)
chr4 (288-327)||(34200283-34200322)
chr4 (288-327)||(36635332-36635371)
chr4 (280-339)||(37496704-37496763)
chr4 (287-333)||(8820415-8820461)
chr4 (288-322)||(14465092-14465126)
chr4 (275-325)||(17446066-17446116)
chr4 (287-337)||(25390888-25390938)
chr4 (278-324)||(35212742-35212788)
chr4 (289-327)||(46180948-46180986)
chr4 (288-325)||(2976702-2976739)
chr4 (280-337)||(5225615-5225672)
chr4 (292-345)||(16189721-16189774)
chr4 (279-324)||(22596995-22597040)
chr4 (277-322)||(24343504-24343549)
chr4 (289-322)||(44796979-44797012)
chr4 (280-337)||(56110806-56110863)
chr4 (288-332)||(3712516-3712560)
chr4 (287-327)||(5176991-5177031)
chr4 (288-324)||(8457933-8457969)
chr4 (289-337)||(9996849-9996897)
chr4 (281-325)||(27096015-27096059)
chr4 (278-322)||(32910549-32910593)
chr4 (288-344)||(40179631-40179687)
chr4 (279-327)||(40224543-40224591)
[»] chr7 (50 HSPs)
chr7 (255-339)||(15902797-15902881)
chr7 (280-335)||(38134410-38134465)
chr7 (287-341)||(44020982-44021036)
chr7 (280-345)||(4909151-4909216)
chr7 (278-345)||(20549789-20549856)
chr7 (280-339)||(23128661-23128720)
chr7 (279-337)||(2525846-2525904)
chr7 (280-336)||(3520345-3520401)
chr7 (277-337)||(19206047-19206107)
chr7 (287-339)||(36314627-36314679)
chr7 (288-339)||(3142078-3142129)
chr7 (265-322)||(7438691-7438748)
chr7 (288-337)||(24146824-24146873)
chr7 (277-322)||(29787386-29787431)
chr7 (253-322)||(30731010-30731079)
chr7 (277-322)||(32308117-32308162)
chr7 (287-324)||(44172905-44172942)
chr7 (288-344)||(3721101-3721157)
chr7 (277-337)||(5835244-5835304)
chr7 (290-342)||(9482944-9482996)
chr7 (293-337)||(22602712-22602756)
chr7 (277-332)||(22868039-22868094)
chr7 (288-322)||(2424622-2424656)
chr7 (275-337)||(5548671-5548733)
chr7 (288-322)||(11700811-11700845)
chr7 (287-337)||(16341503-16341553)
chr7 (288-338)||(17851439-17851489)
chr7 (287-337)||(20427637-20427687)
chr7 (287-325)||(21247750-21247788)
chr7 (278-344)||(27093408-27093474)
chr7 (278-344)||(27184827-27184893)
chr7 (288-322)||(35861972-35862006)
chr7 (288-346)||(38143231-38143289)
chr7 (298-344)||(39138462-39138508)
chr7 (288-337)||(7328693-7328742)
chr7 (288-337)||(19992009-19992058)
chr7 (277-322)||(23191893-23191938)
chr7 (279-344)||(26733303-26733368)
chr7 (277-322)||(27945038-27945083)
chr7 (288-337)||(35297674-35297723)
chr7 (288-337)||(42720892-42720941)
chr7 (277-337)||(1433451-1433511)
chr7 (281-337)||(2982109-2982165)
chr7 (278-326)||(3801218-3801266)
chr7 (277-333)||(6630918-6630974)
chr7 (290-326)||(7133291-7133327)
chr7 (289-333)||(19930947-19930991)
chr7 (288-344)||(21880160-21880216)
chr7 (279-343)||(32287459-32287523)
chr7 (280-324)||(35238199-35238243)
[»] chr1 (62 HSPs)
chr1 (288-344)||(1864875-1864931)
chr1 (279-344)||(19637767-19637832)
chr1 (277-345)||(609452-609520)
chr1 (280-344)||(11412763-11412827)
chr1 (253-344)||(9709793-9709884)
chr1 (255-337)||(6427325-6427407)
chr1 (279-337)||(20157352-20157410)
chr1 (288-345)||(40181879-40181936)
chr1 (279-339)||(14332408-14332467)
chr1 (277-333)||(17831537-17831593)
chr1 (288-344)||(30847715-30847771)
chr1 (277-337)||(36878458-36878518)
chr1 (278-344)||(2288164-2288228)
chr1 (280-327)||(17425105-17425152)
chr1 (288-343)||(38075966-38076021)
chr1 (290-337)||(44482240-44482287)
chr1 (287-325)||(3921674-3921712)
chr1 (277-339)||(10572589-10572651)
chr1 (278-324)||(17080896-17080942)
chr1 (288-337)||(7918213-7918262)
chr1 (275-344)||(14332637-14332706)
chr1 (287-327)||(351096-351136)
chr1 (281-333)||(2445871-2445923)
chr1 (277-337)||(2896123-2896183)
chr1 (277-337)||(9828041-9828101)
chr1 (288-340)||(10233261-10233313)
chr1 (287-323)||(11571592-11571628)
chr1 (277-341)||(13997880-13997944)
chr1 (277-337)||(25361883-25361943)
chr1 (278-322)||(34298434-34298478)
chr1 (288-344)||(38078656-38078712)
chr1 (277-345)||(39953140-39953208)
chr1 (278-322)||(40747790-40747834)
chr1 (280-324)||(43942324-43942368)
chr1 (262-337)||(5898268-5898343)
chr1 (278-325)||(16812541-16812588)
chr1 (277-344)||(29163376-29163443)
chr1 (278-337)||(38503318-38503377)
chr1 (288-322)||(1262892-1262926)
chr1 (287-345)||(7988445-7988503)
chr1 (288-322)||(12443477-12443511)
chr1 (273-339)||(12993187-12993253)
chr1 (277-327)||(25098567-25098617)
chr1 (298-344)||(30749858-30749904)
chr1 (298-344)||(30771309-30771355)
chr1 (288-322)||(31015051-31015085)
chr1 (295-337)||(34371728-34371770)
chr1 (287-344)||(373054-373111)
chr1 (277-322)||(398782-398827)
chr1 (288-337)||(1486711-1486760)
chr1 (290-327)||(19324572-19324609)
chr1 (288-344)||(24462671-24462728)
chr1 (273-322)||(26238129-26238178)
chr1 (279-332)||(39828270-39828323)
chr1 (288-333)||(40285660-40285705)
chr1 (288-337)||(41017406-41017455)
chr1 (287-324)||(43609833-43609870)
chr1 (288-344)||(13436466-13436522)
chr1 (288-332)||(16164322-16164366)
chr1 (289-345)||(18337338-18337394)
chr1 (278-322)||(39101199-39101243)
chr1 (281-321)||(42325561-42325601)
[»] chr5 (50 HSPs)
chr5 (281-339)||(43208274-43208332)
chr5 (287-344)||(19737477-19737534)
chr5 (277-321)||(9449466-9449510)
chr5 (288-344)||(23012403-23012459)
chr5 (277-344)||(28588669-28588736)
chr5 (275-337)||(3966498-3966560)
chr5 (287-337)||(17925174-17925224)
chr5 (279-337)||(28296327-28296385)
chr5 (261-339)||(38749563-38749641)
chr5 (288-337)||(22423814-22423863)
chr5 (279-343)||(23220982-23221046)
chr5 (288-344)||(30502383-30502439)
chr5 (288-344)||(30542726-30542782)
chr5 (287-326)||(18607110-18607149)
chr5 (288-335)||(30098334-30098381)
chr5 (287-325)||(11596469-11596507)
chr5 (278-327)||(2577192-2577241)
chr5 (288-337)||(6471891-6471940)
chr5 (280-337)||(32630737-32630794)
chr5 (279-332)||(39424640-39424693)
chr5 (287-339)||(14818303-14818354)
chr5 (275-343)||(16203791-16203859)
chr5 (265-337)||(18592058-18592130)
chr5 (280-336)||(38806851-38806907)
chr5 (277-344)||(6247619-6247686)
chr5 (279-325)||(2039863-2039909)
chr5 (275-337)||(11685934-11685996)
chr5 (290-344)||(18421836-18421890)
chr5 (275-345)||(21191050-21191120)
chr5 (291-325)||(21194219-21194253)
chr5 (288-322)||(31084331-31084365)
chr5 (288-326)||(31264446-31264484)
chr5 (287-337)||(40211963-40212013)
chr5 (298-344)||(42029770-42029816)
chr5 (374-419)||(52015-52060)
chr5 (280-325)||(4344742-4344787)
chr5 (277-322)||(27932232-27932277)
chr5 (292-337)||(32444778-32444823)
chr5 (278-327)||(32766955-32767004)
chr5 (290-343)||(32932228-32932281)
chr5 (288-337)||(36838551-36838600)
chr5 (288-333)||(41091263-41091308)
chr5 (287-327)||(16881143-16881183)
chr5 (288-344)||(17123056-17123112)
chr5 (288-336)||(17593725-17593773)
chr5 (290-322)||(19438353-19438385)
chr5 (291-327)||(24273042-24273078)
chr5 (291-327)||(24389136-24389172)
chr5 (292-344)||(34879362-34879414)
chr5 (287-327)||(41600905-41600945)
[»] scaffold0011 (1 HSPs)
scaffold0011 (280-337)||(240023-240080)
[»] chr2 (51 HSPs)
chr2 (281-337)||(18570973-18571029)
chr2 (287-342)||(31026702-31026757)
chr2 (255-339)||(4332901-4332983)
chr2 (277-326)||(10535772-10535821)
chr2 (288-337)||(18889593-18889642)
chr2 (288-344)||(896219-896275)
chr2 (288-344)||(5367200-5367256)
chr2 (288-339)||(18420434-18420485)
chr2 (255-322)||(21782835-21782902)
chr2 (287-338)||(44605140-44605191)
chr2 (275-337)||(18276516-18276578)
chr2 (277-327)||(21616759-21616809)
chr2 (278-336)||(23718024-23718082)
chr2 (278-336)||(24105696-24105754)
chr2 (275-333)||(37411250-37411308)
chr2 (287-337)||(37497127-37497177)
chr2 (280-322)||(40681982-40682024)
chr2 (287-344)||(2846904-2846961)
chr2 (288-344)||(31284056-31284113)
chr2 (287-344)||(34006986-34007043)
chr2 (288-337)||(44860328-44860377)
chr2 (292-337)||(45000848-45000893)
chr2 (287-327)||(19613625-19613665)
chr2 (278-326)||(25544479-25544527)
chr2 (288-344)||(34691800-34691856)
chr2 (288-344)||(34714212-34714268)
chr2 (288-340)||(39279683-39279735)
chr2 (280-339)||(4229408-4229467)
chr2 (298-345)||(20242721-20242768)
chr2 (288-335)||(30471046-30471093)
chr2 (288-327)||(36281693-36281732)
chr2 (294-344)||(8300214-8300264)
chr2 (294-324)||(14450810-14450840)
chr2 (280-342)||(22085004-22085066)
chr2 (277-327)||(28677906-28677956)
chr2 (287-321)||(30563416-30563450)
chr2 (278-344)||(31808075-31808141)
chr2 (294-344)||(43586000-43586050)
chr2 (287-344)||(5473335-5473392)
chr2 (287-324)||(10250733-10250770)
chr2 (281-338)||(16630796-16630853)
chr2 (290-327)||(17520082-17520119)
chr2 (288-333)||(29970555-29970600)
chr2 (275-336)||(42205838-42205899)
chr2 (287-340)||(45166417-45166470)
chr2 (288-320)||(2331802-2331834)
chr2 (291-339)||(22131254-22131302)
chr2 (280-324)||(26787813-26787857)
chr2 (288-320)||(27084270-27084302)
chr2 (288-332)||(35449521-35449565)
chr2 (293-337)||(38355889-38355933)
[»] chr3 (55 HSPs)
chr3 (287-346)||(20691326-20691385)
chr3 (278-344)||(7928448-7928514)
chr3 (287-337)||(40150573-40150623)
chr3 (291-344)||(23271989-23272042)
chr3 (267-332)||(37077345-37077410)
chr3 (288-344)||(24633396-24633452)
chr3 (277-344)||(8383254-8383321)
chr3 (288-327)||(9624649-9624688)
chr3 (279-322)||(46191362-46191405)
chr3 (287-326)||(52369782-52369821)
chr3 (290-344)||(8789545-8789599)
chr3 (287-337)||(13807176-13807226)
chr3 (275-344)||(1566403-1566472)
chr3 (272-321)||(16789668-16789717)
chr3 (277-326)||(25074786-25074835)
chr3 (288-345)||(25093510-25093567)
chr3 (275-332)||(32804547-32804604)
chr3 (298-343)||(35222956-35223001)
chr3 (288-344)||(10954960-10955016)
chr3 (288-344)||(45451561-45451617)
chr3 (277-337)||(48202271-48202331)
chr3 (288-344)||(49505149-49505205)
chr3 (288-335)||(10690266-10690313)
chr3 (291-322)||(12704056-12704087)
chr3 (287-326)||(12704670-12704709)
chr3 (298-345)||(13414487-13414534)
chr3 (275-314)||(24633761-24633800)
chr3 (287-337)||(27513664-27513715)
chr3 (279-322)||(41319327-41319370)
chr3 (290-333)||(51512189-51512232)
chr3 (277-339)||(8039203-8039265)
chr3 (288-322)||(11251986-11252020)
chr3 (277-327)||(12704004-12704054)
chr3 (287-337)||(35160727-35160777)
chr3 (287-337)||(40697860-40697910)
chr3 (288-345)||(1502582-1502639)
chr3 (288-321)||(5339116-5339149)
chr3 (277-322)||(5407264-5407309)
chr3 (255-339)||(5441033-5441115)
chr3 (288-337)||(7614417-7614466)
chr3 (288-337)||(8039837-8039886)
chr3 (287-324)||(9210840-9210877)
chr3 (277-314)||(9800037-9800074)
chr3 (280-337)||(13799504-13799561)
chr3 (278-327)||(16192762-16192811)
chr3 (287-324)||(21149074-21149111)
chr3 (277-322)||(21720761-21720806)
chr3 (292-337)||(39002044-39002089)
chr3 (286-326)||(3730178-3730218)
chr3 (279-327)||(11493373-11493421)
chr3 (277-337)||(18426946-18427006)
chr3 (279-339)||(21478682-21478742)
chr3 (288-340)||(29508452-29508504)
chr3 (282-322)||(40017386-40017426)
chr3 (300-344)||(40993330-40993374)
[»] scaffold0110 (1 HSPs)
scaffold0110 (277-339)||(28847-28909)
[»] scaffold0036 (1 HSPs)
scaffold0036 (275-337)||(9749-9811)
[»] scaffold0022 (2 HSPs)
scaffold0022 (279-337)||(99892-99950)
scaffold0022 (288-333)||(90851-90896)
[»] scaffold0085 (1 HSPs)
scaffold0085 (262-319)||(26375-26432)
[»] scaffold0020 (1 HSPs)
scaffold0020 (288-337)||(135314-135363)
[»] scaffold0123 (1 HSPs)
scaffold0123 (292-335)||(44529-44572)
[»] scaffold0044 (1 HSPs)
scaffold0044 (289-336)||(53189-53236)
[»] scaffold0571 (1 HSPs)
scaffold0571 (287-324)||(7697-7734)
[»] scaffold0376 (1 HSPs)
scaffold0376 (288-337)||(6320-6369)
[»] scaffold0007 (1 HSPs)
scaffold0007 (277-322)||(225285-225330)
[»] scaffold0004 (1 HSPs)
scaffold0004 (277-322)||(92804-92849)
[»] scaffold0050 (1 HSPs)
scaffold0050 (288-344)||(70286-70342)
[»] scaffold0024 (1 HSPs)
scaffold0024 (279-323)||(18124-18168)


Alignment Details
Target: chr8 (Bit Score: 448; Significance: 0; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 448; E-Value: 0
Query Start/End: Original strand, 1 - 492
Target Start/End: Original strand, 12985113 - 12985604
Alignment:
Q  1 gatttcaacaaagatcttaaatatccaccattcaaacaggagtttcagcttgctcataaaacaaaccttcaaattggtaacgtaaaatccctttagagga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12985113 gatttcaacaaagatcttaaatatccaccattcaaacaggagtttcagcttgctcataaaacaaaccttcaaattggtaacgtaaaaaccctttagagga 12985212  T
Q  101 cagtacataatgaactgaattgaacaaagtccatttaaaaaagattccttagttattaaaattgaaattttgaatgtagatgaatctaatggacagagaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||    
T  12985213 cagtacataatgaactgaattgaacaaagtccatttaaaaaagattccttagttattaaaattgaaattttgaatatagatgaatctaatggacagcgaa 12985312  T
Q  201 acacccaacctaaaatgtacgcatattctattataaagcacggatacatagacagacacggcacaaacagtgagatgccgacacctataataatttgaga 300  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12985313 acaccgaacctaaaatgtacgtatattctattataaagcacggatacatacacagacacggcacaaacagtgagatgcagacacctataataatttgaga 12985412  T
Q  301 aaatcacataattcaatgtaatcatatctgtcggtgttggacacactccgtgcgctcatagtatactgtactaattaaaatatatgctttgaaagaagaa 400  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  12985413 aaatcacataattcaatgtaatcatatatgtcggtgtcggacacactccgtgcgttcatagtatactgtactaattaaaatatatgttttgaaagaagaa 12985512  T
Q  401 ttcatcataagtttctttacatattactactacatggttaaaataccaaatcataaaccaacttctaaatgacatgagtttgtcaaagccac 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12985513 ttcatcataagtttctttacatattactactacatggttaaaataccaaatcataaaccaacttctaaatgacatgagtttgtcaaagccac 12985604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 7658460 - 7658524
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgga 341  Q
    |||||||||  ||||||||||||||||| |||||||||| |||||| |||| |||||||||||||    
T  7658460 gccgacaccactaataatttgagaaaattacataattcagtgtaattatatttgtcggtgttgga 7658524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 31236628 - 31236580
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  31236628 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 345
Target Start/End: Original strand, 34897084 - 34897150
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||  |||||||||||||||||||||||||||| |||||| |||| ||||| ||| |||||||    
T  34897084 cgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcggacaca 34897150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 281 - 327
Target Start/End: Complemental strand, 37225801 - 37225755
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  37225801 acaccaataataatttgagaaaataacataattcaatgtaatcatat 37225755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 287 - 336
Target Start/End: Original strand, 3508059 - 3508108
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  3508059 ataataatttgagaaaataacataattcaatgtaatcatatgtgttggtg 3508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 12606880 - 12606831
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||||||||    
T  12606880 taataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgt 12606831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 14134707 - 14134756
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  14134707 taataatttgagaaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 4786400 - 4786340
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  ||||||||| |||||||||||||||||| |||||| |||| |||||||||    
T  4786400 gccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 13844647 - 13844591
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||||||||| | |||||| |||| ||||||||| ||||||    
T  13844647 taataatttgagaaaatcacataattgagtgtaattatatgtgtcggtgtcggacac 13844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 40063949 - 40063997
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  40063949 ccgacaccaataataatttgagaaaatgacataattcattgtaatcata 40063997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 29198530 - 29198491
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  29198530 taataatttgagaaaatgacataattcaatgtaatcatat 29198491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 31548353 - 31548295
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| ||||| |||||| ||||| ||||||||||||||||||| || |||||||||    
T  31548353 cgacaccgataattatttgataaaatgacataattcaatgtaatcacatgtgtcggtgt 31548295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 3677794 - 3677851
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    ||||||||| | ||||||||||||||| ||||||| |||| | |||||||||||||||    
T  3677794 taataattttaaaaaatcacataattctatgtaattatatgtatcggtgttggacaca 3677851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 11927137 - 11927088
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||| |||||||||||||||| |||||| |||| |||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtgtcggtgt 11927088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 290 - 339
Target Start/End: Original strand, 22493504 - 22493553
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||||| | |||||||||||||||| ||||||||||| |||||||||||    
T  22493504 ataattttaaaaaatcacataattcagtgtaatcatatatgtcggtgttg 22493553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 26434188 - 26434245
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    ||||| |||||||||||||||||||||||| |||| | |  |||||||||||||||||    
T  26434188 taatagtttgagaaaatcacataattcaatataattaaaagtgtcggtgttggacaca 26434245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 321
Target Start/End: Complemental strand, 29447161 - 29447128
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaa 321  Q
    ||||||||||||||||||||||||||||||||||    
T  29447161 taataatttgagaaaatcacataattcaatgtaa 29447128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 3025559 - 3025615
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||||||||||| |||||| |||  |||| |||| ||||||    
T  3025559 taataatttgagaaaatcacataattcagtgtaattataggtgtcagtgtcggacac 3025615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 14227223 - 14227263
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaa 321  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  14227223 acaccaataataatttgagaaaataacataattcaatgtaa 14227263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 16987920 - 16987964
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    |||||||||||||||||||| |||||||||| |||||||| ||||    
T  16987920 taataatttgagaaaatcacgtaattcaatgcaatcatatgtgtc 16987964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 33405435 - 33405379
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||| ||||||||| | |||||| |||| ||||||||| ||||||    
T  33405435 taataatttgagaaaaacacataatttagtgtaattatatgtgtcggtgtcggacac 33405379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 34201098 - 34201058
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  34201098 ataataatttgagaaaatgacataattcaatgtaattatat 34201058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 11803267 - 11803318
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||||||| |||||||||||||||||| |||||| |||| ||| |||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttg 11803318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 18964195 - 18964234
Alignment:
Q  298 agaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  18964195 agaaaatcacataattcaatgtaattatatgtgtcggtgt 18964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 327
Target Start/End: Original strand, 22770962 - 22771009
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||| |||||||||||| ||||  ||||||||||||||||||||||    
T  22770962 gacaccgataataatttgataaaacaacataattcaatgtaatcatat 22771009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 332
Target Start/End: Complemental strand, 24362264 - 24362209
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    |||||||||  ||||||||||||| |||||||||||||| |||||| |||| ||||    
T  24362264 gccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgtc 24362209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 26466606 - 26466555
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    ||||| |||||||||||||||||| | ||||||||||| |||||||| ||||    
T  26466606 acaccgataataatttgagaaaataagataattcaatgcaatcatatatgtc 26466555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 336
Target Start/End: Complemental strand, 39954341 - 39954282
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    |||||||||  |||||||||||||||||||||||||| | |||||| |||| || |||||    
T  39954341 gccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacggtg 39954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 344
Target Start/End: Original strand, 40332200 - 40332255
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||||||||||||||||||| |||||| | |  ||||||||| ||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcggtgtgggacac 40332255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 294 - 345
Target Start/End: Original strand, 42874536 - 42874587
Alignment:
Q  294 tttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    ||||||||||| ||||||||||||||||||| |  |||| ||||||||||||    
T  42874536 tttgagaaaatgacataattcaatgtaatcacaagtgtcagtgttggacaca 42874587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 4611532 - 4611590
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    ||||||||  ||||||||||||||||| |||||||||| |||||| |||| | ||||||    
T  4611532 ccgacaccgctaataatttgagaaaataacataattcagtgtaattatatgtctcggtg 4611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 20679455 - 20679397
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||  ||||||||||||||||||||||| |||| |||||| |||  |||||||||    
T  20679455 cgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgt 20679397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 334
Target Start/End: Original strand, 27213555 - 27213601
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcgg 334  Q
    ||||||||| |||||||||||||||||| |||||| |||| ||||||    
T  27213555 taataatttcagaaaatcacataattcactgtaattatatgtgtcgg 27213601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 11944673 - 11944722
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||| |||||||||||| ||| |||||| |||| |||||||||    
T  11944673 taataatttgataaaatcacataactcagtgtaattatatgtgtcggtgt 11944722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 20785529 - 20785472
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    ||||| |||||  |||||||||||| ||||||||||||| |||||||| |||| ||||    
T  20785529 atgccaacaccgctaataatttgaggaaatcacataatttaatgtaattatatgtgtc 20785472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 37283861 - 37283807
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||| |||||||||||||||||||| ||||||  ||| ||||||||| ||||||    
T  37283861 taataatctgagaaaatcacataattcagtgtaat--tatgtgtcggtgtgggacac 37283807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 4948660 - 4948716
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| |||||||||||||||| |||||| | |  ||||||||| ||||||    
T  4948660 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 4948716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 8798882 - 8798838
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    ||||||||||||||||| |||||||||||| |||| |||| ||||    
T  8798882 taataatttgagaaaataacataattcaatataattatatgtgtc 8798838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 10441213 - 10441245
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||||||||| |||||||||||||||||    
T  10441213 ataatttgagaaaatgacataattcaatgtaat 10441245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 18646180 - 18646236
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| ||||| |||| ||||| ||||||||||| ||| ||||| ||||||    
T  18646180 taataatttgaaaaaatgacatgattcagtgtaatcatatatgttggtgtcggacac 18646236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 28819198 - 28819246
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggt 335  Q
    ||||||||||||||||||  ||||| |||||| |||||||| |||||||    
T  28819198 ataataatttgagaaaatggcataactcaatgcaatcatatgtgtcggt 28819246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 38278226 - 38278170
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||| |||||||||||||||| ||| |||| |||  | ||||||||||||||    
T  38278226 taataatttaagaaaatcacataatttaatataattatacgtatcggtgttggacac 38278170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 8e-19; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 236 - 344
Target Start/End: Original strand, 9658835 - 9658943
Alignment:
Q  236 aagcacggatacatagacagacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggt 335  Q
    ||||||||||||| | ||||||||| |||  ||| ||| | |||||||||  ||||||||| |||||||||||||||||| |||||| |||| |||||||    
T  9658835 aagcacggatacagacacagacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatatttgtcggt 9658934  T
Q  336 gttggacac 344  Q
    ||| |||||    
T  9658935 gttagacac 9658943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 7377977 - 7378043
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  7377977 ccgacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgtcggtgtcggacac 7378043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 13364754 - 13364700
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttggacac 13364700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 345
Target Start/End: Complemental strand, 7265644 - 7265587
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||    
T  7265644 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaca 7265587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 9617442 - 9617491
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9617491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 9629392 - 9629440
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||    
T  9629392 aataatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 19040349 - 19040416
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||  |||||||||||||||||||||||||||| |||||| |||| |||| |||| ||||||    
T  19040349 gccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgtctgtgtcggacac 19040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 288 - 334
Target Start/End: Complemental strand, 30866195 - 30866149
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcgg 334  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||||    
T  30866195 taataatttgagaaaatcacataattcaatgtaattatatgtgtcgg 30866149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 9025545 - 9025496
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||    
T  9025545 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 9025496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 20371172 - 20371112
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  |||||||||||||||||||||||| ||||||| || |||| |||||||||    
T  20371172 gccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgtcggtgt 20371112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 32299282 - 32299334
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||||||||||||||||||||||||||| | |||  |||||||||||    
T  32299282 ataataatttgagaaaatcacataattcaatgtagttatacgtgtcggtgttg 32299334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 33001340 - 33001284
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| |||||||||||||| |||||||| |||| ||||||||| ||||||    
T  33001340 taataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtcggacac 33001284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 5732572 - 5732505
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||  ||||||||||||||||||||||| || | |||||| |||| ||||||||| ||||||    
T  5732572 gccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtgtcggtgtcggacac 5732505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 9024225 - 9024178
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  9024225 ataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgt 9024178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 333
Target Start/End: Original strand, 26562639 - 26562742
Alignment:
Q  230 attataaagcacggatacatagacagacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatct 329  Q
    |||||||||||| |||||  | |||||||| |||| ||||  || | ||||||||   ||| |||||||||||||||||||||||| |||||| |||| |    
T  26562639 attataaagcacagatacgaacacagacaccgcacgaacacggacacgccgacactgctaaaaatttgagaaaatcacataattcagtgtaattatatgt 26562738  T
Q  330 gtcg 333  Q
    ||||    
T  26562739 gtcg 26562742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 10335424 - 10335370
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||||||| |||||||| |||||||||| || |||||||||| ||||||    
T  10335424 taatttgagaaaatgacataattgaatgtaatcagatgtgtcggtgttcgacaca 10335370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 325
Target Start/End: Original strand, 29049892 - 29049930
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  29049892 ataataatttgagaaaattacataattcaatgtaatcat 29049930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 4859173 - 4859128
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatca 324  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||    
T  4859173 cgacaccaataataatttgagaaaatgacataatccaatgtaatca 4859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 7086803 - 7086852
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||| | |||||| |||| |||||||||    
T  7086803 taataatttgagaaaatcacataatttagtgtaattatatgtgtcggtgt 7086852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 26178732 - 26178683
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||| |||||||||||||| | ||||||||||| |||||||||    
T  26178732 taataatttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 31579276 - 31579222
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||||||||||| ||||||  ||| ||||||||| ||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaat--tatgtgtcggtgtcggacac 31579222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 33340996 - 33340947
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  33340996 taataatttgagaaaatcacataactcaatggaatcatatgtgttggtgt 33340947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 344
Target Start/End: Original strand, 34172188 - 34172257
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||| ||| |||||||||||||||||||||| | |  ||| |||| ||||||||| ||||||    
T  34172188 atgccgacacctctaacaatttgagaaaatcacataattaattaaaattatatgtgtcggtgtcggacac 34172257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 35125102 - 35125151
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||| |||||| |||||||| ||| |||||    
T  35125102 taataatttgagaaaatcacataactcaatggaatcatatgtgttggtgt 35125151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 2117074 - 2117114
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatg 318  Q
    ||||||||| ||||||||||| |||||||||||||||||||    
T  2117074 ccgacacctctaataatttgaaaaaatcacataattcaatg 2117114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 9027175 - 9027235
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  ||||||||||||| |||||||||||||  |||||| |||| |||||||||    
T  9027175 gccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgtcggtgt 9027235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 10157995 - 10158039
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaatcatatctgtcggt 335  Q
    |||||||||||||| ||||||||||||||||||| || |||||||    
T  10157995 taatttgagaaaatgacataattcaatgtaatcacatgtgtcggt 10158039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 333
Target Start/End: Original strand, 10842529 - 10842585
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||  ||||||||||| |||||||||||||| | ||||||||||| |||||    
T  10842529 gccgacaccgctaataatttgaaaaaatcacataatttagtgtaatcatatgtgtcg 10842585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 11784274 - 11784218
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||| |||||||||||||||||||||||| | ||| |||||| |||| |||||||||    
T  11784274 acacatataataatttgagaaaatcacatgaatcagtgtaattatatatgtcggtgt 11784218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 15443702 - 15443754
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||||||||||| |||||||||||| |||| |||| ||| |||||||    
T  15443702 ataataatttgagaaaataacataattcaatataattatatatgttggtgttg 15443754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 21924986 - 21924930
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||| |||| |||||||| |||||| |||| ||||||||| ||||||    
T  21924986 taataatttgagaatatcaaataattcagtgtaattatatgtgtcggtgtcggacac 21924930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 5462694 - 5462733
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  5462694 taataatttgagaaaatcacataattcattgtaattatat 5462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 34446572 - 34446611
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||||||||||||| |||||||||| ||||||||||    
T  34446572 ataataatttgagaaaatgacataattcagtgtaatcata 34446611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 321
Target Start/End: Complemental strand, 2140533 - 2140499
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaa 321  Q
    |||||||||||||||||| ||||||||||||||||    
T  2140533 ataataatttgagaaaatgacataattcaatgtaa 2140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 7996442 - 7996380
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||   ||||||||||||||||||| |||||||| |||||| ||||  ||||||||    
T  7996442 atgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 7996380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 8022359 - 8022421
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||   ||||||||||||||||||| |||||||| |||||| ||||  ||||||||    
T  8022359 atgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatgcgtcggtgt 8022421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 10294102 - 10294164
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| |||  ||||||||||||| |||| |||| ||||||||||| |||| |||||||||    
T  10294102 atgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgt 10294164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 337
Target Start/End: Complemental strand, 13360420 - 13360374
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||||| |||||| |||| | |||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgtttcggtgt 13360374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 333
Target Start/End: Original strand, 31115484 - 31115538
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    ||||||| ||||||||||||| |||| ||| |||||||||| ||||||| |||||    
T  31115484 cgacaccaataataatttgagtaaataacacaattcaatgtgatcatatgtgtcg 31115538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 43724 - 43757
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaa 321  Q
    |||||||||||||||||||| |||||||||||||    
T  43724 taataatttgagaaaatcacgtaattcaatgtaa 43757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Complemental strand, 122167 - 122102
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||| ||| |||||||||||| || ||||||||| |||| |||| || ||| ||||||||||||    
T  122167 cgacacttatgataatttgagaagatgacataattcgatgttatcacatgtgttggtgttggacac 122102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 343
Target Start/End: Complemental strand, 6751927 - 6751878
Alignment:
Q  294 tttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggaca 343  Q
    ||||||||||| ||||||||||||||||||| |  ||||||||| |||||    
T  6751927 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggaca 6751878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 9195805 - 9195756
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||| |||||||| | |||||| |||| |||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgt 9195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 333
Target Start/End: Complemental strand, 11591917 - 11591876
Alignment:
Q  292 aatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||||||||||||||||| |||||| |||| |||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgtcg 11591876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 17341726 - 17341681
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||||    
T  17341726 gccgacaccgttaataatttgataaaatcacataattcagtgtaat 17341681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 19044472 - 19044521
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||| ||||||||||||| ||| || |||| |||||||||    
T  19044472 taataatttgagaatatcacataattcagtgttattatatgtgtcggtgt 19044521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 334
Target Start/End: Complemental strand, 26314684 - 26314639
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcgg 334  Q
    |||||||||| ||||||| ||||||||||||||| |||| ||||||    
T  26314684 aataatttgaaaaaatcatataattcaatgtaattatatatgtcgg 26314639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 28862118 - 28862179
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacat-aattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| | |||||||||||| ||||| |||| |||||| ||||||||||| |||||||||    
T  28862118 gccgacatcgataataatttgataaaatgacattaattcagtgtaatcatatgtgtcggtgt 28862179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 30851610 - 30851664
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||| |||||||||||  |||||||||||| |||| ||||||||| ||||||    
T  30851610 taataatttaagaaaatcaca--attcaatgtaattatatgtgtcggtgtcggacac 30851664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 32320720 - 32320671
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||| |||||||||||||||||||| || |||| | |||||||    
T  32320720 taataatttgataaaatcacataattcaatgtcattatatgtatcggtgt 32320671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 34073398 - 34073349
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||| ||||||||| |||||| ||||  ||||||||    
T  34073398 taataatttgagaaaatctcataattcagtgtaattatatgggtcggtgt 34073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 326
Target Start/End: Complemental strand, 34895092 - 34895047
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||||||||||||||||||| | | |||||| ||||||||||    
T  34895092 acacctataataatttgagaaaattatacaattcagtgtaatcata 34895047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 426565 - 426509
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| |||||||||||||| |||||||| | |  ||||||||| ||||||    
T  426565 taataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtcggacac 426509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 2493472 - 2493428
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    ||||| |||||||||||| ||||| |||||||| |||||||||||    
T  2493472 acaccgataataatttgacaaaatgacataattgaatgtaatcat 2493428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 7151413 - 7151469
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||| ||||||||||| |||||||||||||| | |||||| |||| ||| |||||    
T  7151413 acacctctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgt 7151469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 10031570 - 10031614
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||| |||| | ||||||||||| |||||||||||||||||||    
T  10031570 gacaccgataaaattttgagaaaatgacataattcaatgtaatca 10031614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 12627628 - 12627572
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||| ||| |||||||||||||||| |||||| |||| ||||| ||| ||||||    
T  12627628 taataatgtgaaaaaatcacataattcagtgtaataatatgtgtcgatgtcggacac 12627572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 13689254 - 13689206
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||  |||||||||||||||||| ||| | |||||||||||||||    
T  13689254 ccgacacagataataatttgagaaaataacaaatttcaatgtaatcata 13689206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 285 - 313
Target Start/End: Original strand, 29601484 - 29601512
Alignment:
Q  285 ctataataatttgagaaaatcacataatt 313  Q
    |||||||||||||||||||||||||||||    
T  29601484 ctataataatttgagaaaatcacataatt 29601512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 29711269 - 29711321
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||||||||||| |||||||||| | ||| || || |||||||||||    
T  29711269 ataataatttgagaaaatgacataattcattataaccacatgtgtcggtgttg 29711321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 262 - 322
Target Start/End: Complemental strand, 34290154 - 34290094
Alignment:
Q  262 cacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||| ||| ||||||||||   |||||||||| || |||||||||||||| ||||||    
T  34290154 cacaaacactgacatgccgacacaactaataatttgcgagaatcacataattcagtgtaat 34290094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 34595142 - 34595198
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| |||||||||||||||| |||||| | |  ||||||||| ||||||    
T  34595142 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 34595198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 287 - 341
Target Start/End: Complemental strand, 43300023 - 43299969
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgga 341  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  43300023 ataataatttgagaaaattacataattcaatgtaatcatatctgccggtgttgga 43299969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 18513300 - 18513241
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  18513300 gacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttg 18513241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 43300623 - 43300677
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgga 341  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||| |||||||    
T  43300623 ataataatttgagaaaattacataattcaatgtaatcatatttgtcgctgttgga 43300677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 33950144 - 33950193
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  33950144 taataatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgt 33950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 273 - 344
Target Start/End: Complemental strand, 8423784 - 8423713
Alignment:
Q  273 agatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||| ||||||||  |||||||||||||||||||||||||||| |||||| |||  ||||||||| ||||||    
T  8423784 agataccgacaccgctaataatttgagaaaatcacataattcagtgtaattataaatgtcggtgtcggacac 8423713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 14465353 - 14465299
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcgg 334  Q
    |||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  14465353 gacaccgataataatttgagaaaatgacataattcaatttaatcatatgtgtcgg 14465299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 5654643 - 5654604
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  5654643 ataataatttgagaaaatgacataattcaatgtaatcata 5654604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 10546155 - 10546194
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  10546155 ataataatttgagaaaatgacataattcaatgtaatcata 10546194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 326
Target Start/End: Complemental strand, 31243608 - 31243561
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  31243608 cgacacttataataatttgagaaaatgacataattcagtgtaatcata 31243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 343
Target Start/End: Complemental strand, 40224541 - 40224494
Alignment:
Q  296 tgagaaaatcacataattcaatgtaatcatatctgtcggtgttggaca 343  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  40224541 tgagaaaatgacataatttaatgtaatcatatgtgtcggtgttggaca 40224494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 5775418 - 5775360
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||  |||||||||||||||||||||||||| | |||||| |||| |||||||||    
T  5775418 cgacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 7012063 - 7012125
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||||||| |||||||||||||||||| |||||||||| ||| ||||||  | |||||||||    
T  7012063 gccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttg 7012125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 289 - 339
Target Start/End: Original strand, 11110212 - 11110262
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||||||||| ||||||||| |||||||||||| ||||| |||||    
T  11110212 aataatttgagaaaatgacataattcgatgtaatcatatgtgtcgatgttg 11110262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 56049876 - 56049933
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| |||||||||||||||| | ||||| |||||||||||||||| |||||||||    
T  56049876 cgacaccgataataatttgagaaa-tgacatagttcaatgtaatcatatgtgtcggtgt 56049933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 7214573 - 7214524
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||| |||||||| ||||  ||||||||    
T  7214573 taataatttgagaaaatcacataatttaatgtaattatatgcgtcggtgt 7214524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 12077836 - 12077869
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaa 321  Q
    ||||||||||||||||||||||||||||||||||    
T  12077836 taataatttgagaaaatcacataattcaatgtaa 12077869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 20743340 - 20743291
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    ||||||||  |||||||||||||||||| |||||||||| ||||||||||    
T  20743340 gccgacacggataataatttgagaaaatgacataattcagtgtaatcata 20743291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 321
Target Start/End: Complemental strand, 24613752 - 24613719
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaa 321  Q
    ||||||||||||||||||||||||||||||||||    
T  24613752 taataatttgagaaaatcacataattcaatgtaa 24613719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 281 - 322
Target Start/End: Complemental strand, 26276067 - 26276026
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  26276067 acacctatgataatttgagaaaatgacataattcaatgtaat 26276026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 34589765 - 34589720
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||| |||| ||||||||||||| ||||||||||||||||||||    
T  34589765 gacaccgataacaatttgagaaaatgacataattcaatgtaatcat 34589720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 35723447 - 35723386
Alignment:
Q  277 gccgacacctataataatttgagaaaat-cacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  ||||||||||||||||| |||||||||||||||||| |||| |||| ||||    
T  35723447 gccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgtcagtgt 35723386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 334
Target Start/End: Original strand, 40613447 - 40613504
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcgg 334  Q
    |||||||||  ||||| |||||||||||||||||||||| |||||| |||| ||||||    
T  40613447 gccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtgtcgg 40613504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 2234260 - 2234292
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||||||||||||||||||||    
T  2234260 ataatttgagaaaatcacataattcaatgtaat 2234292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 20521911 - 20521863
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    ||||| ||| |||||||||||| ||||||||||||||||||| ||||||    
T  20521911 gccgataccgataataatttgataaaatcacataattcaatgaaatcat 20521863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 337
Target Start/End: Complemental strand, 21345591 - 21345535
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||| |||||||||||| ||||| |||||| ||||||||||||| | |||||||||    
T  21345591 acaccaataataatttgaaaaaataacataactcaatgtaatcatttatgtcggtgt 21345535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 22440660 - 22440612
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||  |||||||||||||||||||||||||||| |||||| ||||    
T  22440660 cgacaccgttaataatttgagaaaatcacataattcagtgtaattatat 22440612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 29205452 - 29205508
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| |||||||||||||||| |||||| | |  ||||||||||||||||    
T  29205452 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgttggacac 29205508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 337
Target Start/End: Complemental strand, 30103406 - 30103359
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||||| | ||||||||||| |||||||||    
T  30103406 aataatttgagaaaatcacataatt-agtgtaatcatatgtgtcggtgt 30103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 46715533 - 46715469
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||| | |||||||||||| ||||||||||||||||||| | |||| |||| |||| ||||||    
T  46715533 gacaccgacaataatttgagacaatcacataattcaatgtagttatatttgtctgtgtcggacac 46715469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 54580074 - 54580018
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| |||||||||||||||| |||||| |||  ||||||||| ||||||    
T  54580074 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcggacac 54580018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 903930 - 903969
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatat 903969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 322
Target Start/End: Complemental strand, 19230361 - 19230326
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||||| |||||||||||||||||    
T  19230361 ataataatttgagaaaataacataattcaatgtaat 19230326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 327
Target Start/End: Complemental strand, 34200322 - 34200283
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  34200322 taataatttgagaaaatcacataattcaattgaatcatat 34200283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 36635332 - 36635371
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  36635332 taataatttgagaaaatcacataattcagtgtaattatat 36635371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Original strand, 37496704 - 37496763
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||| |||||  ||||||||||| ||||||||||||||||||| |  |||||||||||    
T  37496704 gacaccgataattttttgagaaaatgacataattcaatgtaatcacaagtgtcggtgttg 37496763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 333
Target Start/End: Original strand, 8820415 - 8820461
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||||| ||||||||||||||||||| | |||||| |||||    
T  8820415 ataataatttgataaaatcacataattcaatggagtcatatgtgtcg 8820461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 14465126 - 14465092
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||||| |||||||||||||||||||||||    
T  14465126 taataatttgaaaaaatcacataattcaatgtaat 14465092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 17446066 - 17446116
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||||||||  ||||||||| |||||||||||||||| | |||||||||    
T  17446066 atgccgacaccactaataatttaagaaaatcacataatttagtgtaatcat 17446116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 25390938 - 25390888
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||| ||||||| |||||||||||| ||| ||||| |||||||||    
T  25390938 ataataattttagaaaatgacataattcaatataaccatatgtgtcggtgt 25390888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 35212788 - 35212742
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||| |||||||||||||||||| | |||||| ||||||||||    
T  35212788 ccgacaccaataataatttgagaaaattaaataattgaatgtaatca 35212742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 289 - 327
Target Start/End: Complemental strand, 46180986 - 46180948
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  46180986 aataatttgagaaaataacataattcagtgtaatcatat 46180948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 325
Target Start/End: Original strand, 2976702 - 2976739
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcat 325  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  2976702 taataatttgagaaaatgacataattgaatgtaatcat 2976739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 5225672 - 5225615
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||| ||| ||||||||||| ||| ||||||||||||| ||| |||| |||||||||    
T  5225672 gacacatattataatttgagataatgacataattcaatgcaataatatgtgtcggtgt 5225615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 345
Target Start/End: Original strand, 16189721 - 16189774
Alignment:
Q  292 aatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||||||||||||||||| |||||| || | ||||||||  |||||||    
T  16189721 aatttgagaaaatcacataattcagtgtaattatgtgtgtcggtgacggacaca 16189774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 324
Target Start/End: Complemental strand, 22597040 - 22596995
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatca 324  Q
    ||||||| ||||||||||||||||||  |||||||||| |||||||    
T  22597040 cgacaccaataataatttgagaaaattgcataattcaacgtaatca 22596995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 24343504 - 24343549
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||  |||||||||||||||||| |||||||||| ||||||    
T  24343504 gccgacacggataataatttgagaaaattacataattcagtgtaat 24343549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 322
Target Start/End: Complemental strand, 44797012 - 44796979
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||| |||||||||||||||||    
T  44797012 aataatttgagaaaataacataattcaatgtaat 44796979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 56110806 - 56110863
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||| |||||||||||  || ||||||||||||||| |||| |||| |||||||||    
T  56110806 gacaccgataataatttgtaaacatcacataattcaatataattatatgtgtcggtgt 56110863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 3712560 - 3712516
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    |||||||||||||||||||  |||||||||||||| |||| ||||    
T  3712560 taataatttgagaaaatcatgtaattcaatgtaattatatgtgtc 3712516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 5176991 - 5177031
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||| ||||||||||| ||||||||||||||||| ||||    
T  5176991 ataatattttgagaaaataacataattcaatgtaataatat 5177031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 324
Target Start/End: Original strand, 8457933 - 8457969
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatca 324  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  8457933 taataatttgagaaaatgacataattgaatgtaatca 8457969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 337
Target Start/End: Original strand, 9996849 - 9996897
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||||||| | |||| |||| | |||||||    
T  9996849 aataatttgagaaaatcacataattcagtataattatatgtctcggtgt 9996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 27096059 - 27096015
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    ||||| |||||||||||| ||||| |||||||| |||||||||||    
T  27096059 acaccgataataatttgacaaaatgacataattgaatgtaatcat 27096015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 32910549 - 32910593
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||  |||||||||||||||||| |||||||||| ||||||    
T  32910549 ccgacacggataataatttgagaaaatgacataattcagtgtaat 32910593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 40179687 - 40179631
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||| ||||| |||||||||||||||| |||||| ||||  |||||||| ||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaattatatgcgtcggtgtcggacac 40179631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 40224591 - 40224543
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||| |||||||||||||||||| | |||| |||||||||| ||||    
T  40224591 cgacacccataataatttgagaaaatgatataagtcaatgtaataatat 40224543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 15902797 - 15902881
Alignment:
Q  255 gacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||| |||| ||| ||| ||||||||||| |||||||||||| |||||||||||||| | |||||| |||| |||||||||||    
T  15902797 gacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgtcggtgttg 15902881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 38134465 - 38134410
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggt 335  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| |||||||    
T  38134465 gacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcggt 38134410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 287 - 341
Target Start/End: Original strand, 44020982 - 44021036
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgga 341  Q
    |||||||||||| ||||| |||||||||||||||| |||||||||||||||||||    
T  44020982 ataataatttgaaaaaattacataattcaatgtaaccatatctgtcggtgttgga 44021036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 345
Target Start/End: Original strand, 4909151 - 4909216
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||| |||||||||||||||||| |||||||||| ||||||||||| |||| |||| |||||||    
T  4909151 gacaccaataataatttgagaaaattacataattcattgtaatcatatgtgtcagtgtcggacaca 4909216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 278 - 345
Target Start/End: Original strand, 20549789 - 20549856
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    ||||||||  |||||||||||||||||||| ||||||| |||||| |||| ||||||||| |||||||    
T  20549789 ccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgtcggacaca 20549856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 23128720 - 23128661
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||| ||||||||||||||||| || |||||||| ||||||||||| |||||||||||    
T  23128720 gacaccaataataatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttg 23128661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 2525904 - 2525846
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| ||||||||||||| |||| |||||||||||| ||||||||| |||||||||    
T  2525904 cgacaccgataataatttgagcaaatgacataattcaatataatcatatgtgtcggtgt 2525846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 3520401 - 3520345
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    |||||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||||    
T  3520401 gacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtgtcggtg 3520345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 19206047 - 19206107
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  |||||||||||||||||||||||||||| | |||| |||| |||||||||    
T  19206047 gccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgtcggtgt 19206107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 36314679 - 36314627
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||| |||||||    
T  36314679 ataataatttgagaaaatgacatatttcaatgtaatcatatgtgttggtgttg 36314627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 3142129 - 3142078
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||| ||||| |||||| |||||||||||||||||||| |||||||||||    
T  3142129 taataaattgagtaaatcatataattcaatgtaatcatatgtgtcggtgttg 3142078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 322
Target Start/End: Original strand, 7438691 - 7438748
Alignment:
Q  265 aaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||| ||| ||||||||||   ||||||||||| |||||||||||||||||||||||    
T  7438691 aaacactgacatgccgacacagttaataatttgaaaaaatcacataattcaatgtaat 7438748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 24146824 - 24146873
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||| |||||||||||||||||||| |||| |||| |||||||||    
T  24146824 taataattttagaaaatcacataattcaatataattatatgtgtcggtgt 24146873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 29787431 - 29787386
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||    
T  29787431 gccgacaccgctaataatttgagaaaatcacataattcagtgtaat 29787386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 30731010 - 30731079
Alignment:
Q  253 cagacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||| |||| ||||||  | |||||||||   ||||||||||||||||||||||||||| ||||||    
T  30731010 cagacacgacacatacagtggcacgccgacaccgcgaataatttgagaaaatcacataattcagtgtaat 30731079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 32308117 - 32308162
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||    
T  32308117 gccgacaccgctaataatttgagaaaatcacataattcagtgtaat 32308162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 44172942 - 44172905
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||||||||||||| |||||||||||||||||||    
T  44172942 ataataatttgagaaaatgacataattcaatgtaatca 44172905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 3721101 - 3721157
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||||||||| | | |||| |||| ||||||||| ||||||    
T  3721101 taataatttgagaaaatcacataatttagtataattatatgtgtcggtgtcggacac 3721157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 5835244 - 5835304
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  ||||| ||||||||||| |||||||||| |||||| |||| |||||||||    
T  5835244 gccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgt 5835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 342
Target Start/End: Original strand, 9482944 - 9482996
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggac 342  Q
    ||||||||||||||||||| |||||| |||||| |||| ||||||||| ||||    
T  9482944 ataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggac 9482996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 22602756 - 22602712
Alignment:
Q  293 atttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 22602712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 332
Target Start/End: Original strand, 22868039 - 22868094
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    |||||||||  ||||||| |||||||||||||||||||| |||||| |||| ||||    
T  22868039 gccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgtc 22868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 2424622 - 2424656
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||||||||||||||| ||||||    
T  2424622 taataatttgagaaaatcacataattcagtgtaat 2424656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 5548671 - 5548733
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||  | ||||||||||||||||| |||||||| |||||| |||| |||| ||||    
T  5548671 atgccgacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgt 5548733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 11700811 - 11700845
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||||| |||||||||||||||||||||||    
T  11700811 taataatttgacaaaatcacataattcaatgtaat 11700845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 16341503 - 16341553
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||||||| | |||||| |||| || ||||||    
T  16341503 ataataatttgagaaaatcacataattaagtgtaattatatgtgccggtgt 16341553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 338
Target Start/End: Original strand, 17851439 - 17851489
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgtt 338  Q
    ||||||||| |||||||||||||||||| |||||| |||| |||| |||||    
T  17851439 taataattttagaaaatcacataattcagtgtaattatatgtgtctgtgtt 17851489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 20427687 - 20427637
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||| || ||||| || ||||||||||||| |||||||||    
T  20427687 ataataatttgagaagatgacatatttaaatgtaatcatatgtgtcggtgt 20427637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 21247788 - 21247750
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||||||||||||||| || |||||||||||||||||    
T  21247788 ataataatttgagaaaatgacgtaattcaatgtaatcat 21247750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 344
Target Start/End: Complemental strand, 27093474 - 27093408
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||  ||||||||| |||||||||||||||| | |||||| ||||  ||||||||| |||||    
T  27093474 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgttagacac 27093408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 27184827 - 27184893
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||  ||||||||| |||||||||||||||| | |||||| ||||  ||||||||| |||||    
T  27184827 ccgacaccgctaataatttaagaaaatcacataatttagtgtaattatatgcgtcggtgttagacac 27184893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 35861972 - 35862006
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||||| |||||||||||||||||||||||    
T  35861972 taataatttgaaaaaatcacataattcaatgtaat 35862006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 346
Target Start/End: Original strand, 38143231 - 38143289
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacacac 346  Q
    ||||||||||| |||||||||||||| |||||||| |||| ||| |||||  |||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaattatatgtgttggtgtcagacacac 38143289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 39138462 - 39138508
Alignment:
Q  298 agaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||| |||||| |||| ||||||||| ||||||    
T  39138462 agaaaatcacataattcagtgtaattatatatgtcggtgtcggacac 39138508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 7328742 - 7328693
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||| |||||||| | |||||| |||| |||||||||    
T  7328742 taataatttgagaaaataacataatttagtgtaattatatgtgtcggtgt 7328693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 19992009 - 19992058
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||| |||| |||||| |||  |||||||||    
T  19992009 taataatttgagaaaatcacatatttcagtgtaattataagtgtcggtgt 19992058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 23191893 - 23191938
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  ||||||||||||||||||||||| |||| ||||||    
T  23191893 gccgacaccgctaataatttgagaaaatcacatatttcagtgtaat 23191938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 26733303 - 26733368
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||  ||||||||||| |||||||||||||||| | |||| | || ||||||||| ||||||    
T  26733303 cgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgtcggtgtcggacac 26733368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 27945038 - 27945083
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  ||||||||||||||||| |||||||||| ||||||    
T  27945038 gccgacaccactaataatttgagaaaattacataattcagtgtaat 27945083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 35297723 - 35297674
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||||| | |||| |||| ||| |||||    
T  35297723 taataatttgagaaaatcacataattcattataattatatgtgttggtgt 35297674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 42720941 - 42720892
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||| |||||||||||||| |||||||| |||| |||| ||||    
T  42720941 taataatttgaaaaaatcacataattaaatgtaattatatgtgtcagtgt 42720892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 1433451 - 1433511
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  |||||||||||||||||||||| |||   |||||| |||| |||||||||    
T  1433451 gccgacaccgttaataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgt 1433511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 2982109 - 2982165
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||| |||||||| |||||||||  ||||||||||| |||||| |||||| |||||    
T  2982109 acaccgataataatctgagaaaatgtcataattcaatctaatcacatctgttggtgt 2982165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 326
Target Start/End: Complemental strand, 3801266 - 3801218
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||  |||||||||| ||||||| ||||||||||| |||||||||    
T  3801266 ccgacacaaataataatttaagaaaataacataattcaaggtaatcata 3801218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 6630974 - 6630918
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||  ||||||||||||||| |||| ||||||| |||||| |||| |||||    
T  6630974 gccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcg 6630918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 326
Target Start/End: Complemental strand, 7133327 - 7133291
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcata 326  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  7133327 ataatttgagaaaatgacataattcagtgtaatcata 7133291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 333
Target Start/End: Complemental strand, 19930991 - 19930947
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||| ||||| ||||||||||||||||| |||| |||||    
T  19930991 aataatttgataaaatgacataattcaatgtaattatatgtgtcg 19930947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 21880160 - 21880216
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||||||||| |||||||||| |||||| | |  ||||||||| ||||||    
T  21880160 taataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcggacac 21880216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 343
Target Start/End: Complemental strand, 32287523 - 32287459
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggaca 343  Q
    |||||||  ||||||| |||||||||||||||||||| || ||  |||| ||||||||| |||||    
T  32287523 cgacaccgctaataatctgagaaaatcacataattcagtgcaagtatatgtgtcggtgtcggaca 32287459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 35238243 - 35238199
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||| |||||| ||||||||||| |||||||||||| ||||||    
T  35238243 gacaccgataatattttgagaaaatgacataattcaatataatca 35238199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 1864931 - 1864875
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttggacac 1864875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 279 - 344
Target Start/End: Original strand, 19637767 - 19637832
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||| |||||||||| ||||||| |||| ||||||||||||||||| ||||||||| ||||||    
T  19637767 cgacaccgataataatttaagaaaatgacattattcaatgtaatcatatgtgtcggtgtcggacac 19637832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 609520 - 609452
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||  ||||||||||||||||| |||||||||||  ||||||||| ||||||| |||||||||    
T  609520 gccgacaccactaataatttgagaaaattacataattcaacataatcatatatgtcggtattggacaca 609452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 280 - 344
Target Start/End: Complemental strand, 11412827 - 11412763
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||| |||||||| ||||||||| |||||||||||||| ||||||  ||||||||||||||||    
T  11412827 gacaccgataataatatgagaaaatgacataattcaatgtgatcataggtgtcggtgttggacac 11412763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 344
Target Start/End: Original strand, 9709793 - 9709884
Alignment:
Q  253 cagacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||| |||  ||| ||| ||||| |||||  |||||||||||||||||||||||||||  |||||| |||| ||||||||| ||||||    
T  9709793 cagacacgacacggacactgacatgcctacaccgctaataatttgagaaaatcacataattcgttgtaattatatgtgtcggtgtcggacac 9709884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 6427325 - 6427407
Alignment:
Q  255 gacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||  ||| ||| | ||| |||||  ||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  6427325 gacacggcacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgt 6427407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 337
Target Start/End: Complemental strand, 20157410 - 20157352
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||  ||||||| |||||||||||||||||||| ||||||||||| |||||||||    
T  20157410 cgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgt 20157352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 40181879 - 40181936
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||||||||||||||||||||| |||||| |||| | ||||||| |||||||    
T  40181879 taataatttgagaaaatcacataattcagtgtaattatatgtatcggtgtcggacaca 40181936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 14332408 - 14332467
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||| || |||||||||||    
T  14332408 cgacaccgataa-aatttgagaaaatgacataattcaatgtaatcacatatgtcggtgttg 14332467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 333
Target Start/End: Complemental strand, 17831593 - 17831537
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||  |||||||||||||||||||||| ||||| ||||||||||| |||||    
T  17831593 gccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcg 17831537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 30847771 - 30847715
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||| |||||| ||||    
T  30847771 taataatttgaaaaaatgacataattcaatgtaatcatatgtgtcagtgttgaacac 30847715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 36878458 - 36878518
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  |||||||||||||||||||||||||||| |||||| |||  |||||||||    
T  36878458 gccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 278 - 344
Target Start/End: Complemental strand, 2288228 - 2288164
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||| | |||||||||| |||||||||||||||||||||||||  ||| ||||||||| ||||||    
T  2288228 ccgacaacaataataatttaagaaaatcacataattcaatgtaat--tatgtgtcggtgtcggacac 2288164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 280 - 327
Target Start/End: Complemental strand, 17425152 - 17425105
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  17425152 gacaccgataataatttgataaaatcacataattcaatgtaattatat 17425105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 343
Target Start/End: Complemental strand, 38076021 - 38075966
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggaca 343  Q
    |||||||||||| ||||||||||| ||| ||||||||||| ||||||||| |||||    
T  38076021 taataatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgtcggaca 38075966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 44482240 - 44482287
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||| |||||| |||| |||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 44482287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 325
Target Start/End: Original strand, 3921674 - 3921712
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3921674 ataataatttgagaaaatgacataattcaatgtaatcat 3921712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 339
Target Start/End: Complemental strand, 10572651 - 10572589
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||  |||||||||||||||||||||||||||  |||||| | || |||||||||||    
T  10572651 gccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttg 10572589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 17080942 - 17080896
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||||    
T  17080942 ccgacaccaataataatttgagaaaataacataattgaatgtaatca 17080896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 7918262 - 7918213
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||||| |||||| |||| |||| ||||    
T  7918262 taataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgt 7918213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 14332706 - 14332637
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||| |||||  |||||||||||||||||||||||||| | |||||| |||| | ||||||| ||||||    
T  14332706 atgcccacaccactaataatttgagaaaatcacataatttagtgtaattatatgtctcggtgtcggacac 14332637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 351136 - 351096
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||| ||||||||||||||||||| ||||||||    
T  351136 ataataatttgataaaatcacataattcaatggaatcatat 351096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 333
Target Start/End: Original strand, 2445871 - 2445923
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||||| |||||    
T  2445871 acaccaatgataatttgagaaaatgacataattcaatttaatcatatgtgtcg 2445923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 2896183 - 2896123
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  |||||||||||||||||||||||||||| ||||   |||| |||||||||    
T  2896183 gccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgtcggtgt 2896123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 9828041 - 9828101
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||||  ||| |||||||||    
T  9828041 gccgacaccactaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgt 9828101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 10233261 - 10233313
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgg 340  Q
    |||||| ||||||||||||||||||||| |||||| |||| |||| |||||||    
T  10233261 taataaattgagaaaatcacataattcagtgtaattatatgtgtctgtgttgg 10233313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 323
Target Start/End: Original strand, 11571592 - 11571628
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatc 323  Q
    |||||||||||||||||| ||||||||||||||||||    
T  11571592 ataataatttgagaaaatgacataattcaatgtaatc 11571628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 341
Target Start/End: Original strand, 13997880 - 13997944
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgga 341  Q
    |||||||||  |||| |||| | |||||||||||||||| |||||| |||| |||||||||||||    
T  13997880 gccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtgtcggtgttgga 13997944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 25361883 - 25361943
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  | |||||||||||||||||||||||||| |||||| |||| |||| ||||    
T  25361883 gccgacaccactgataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgt 25361943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 34298434 - 34298478
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||    
T  34298434 ccgacaccactaataatttgagaaaatcacataattcagtgtaat 34298478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 38078712 - 38078656
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| ||||||||||||||||||||||| | |  ||||||||| ||||||    
T  38078712 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcggacac 38078656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 345
Target Start/End: Complemental strand, 39953208 - 39953140
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||  ||||||||| |||||||||||||||| | ||||||  ||| ||||||||| |||||||    
T  39953208 gccgacaccgctaataattttagaaaatcacataatttagtgtaattgtatgtgtcggtgtcggacaca 39953140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 40747834 - 40747790
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||  |||||||||||||||||| |||||||||||||||||    
T  40747834 ccgacacggataataatttgagaaaatgacataattcaatgtaat 40747790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 43942324 - 43942368
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||    
T  43942324 gacaccaataatgatttgagaaaataacataattcaatgtaatca 43942368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 337
Target Start/End: Complemental strand, 5898343 - 5898268
Alignment:
Q  262 cacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||| ||| ||||| |||||||||  ||||||| ||| |||||||||||||||| |||||| ||||  ||||||||    
T  5898343 cacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatgcgtcggtgt 5898268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 325
Target Start/End: Original strand, 16812541 - 16812588
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||||| |||||||||||| |||||||||||||||| || ||||||    
T  16812541 ccgacaccaataataatttgacaaaatcacataattcagtggaatcat 16812588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 29163443 - 29163376
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||  ||| |||||  ||||||||||||||||||| |||| |||| ||||||||| ||||||    
T  29163443 gccgacaccgctaaaaatttaggaaaatcacataattcaatttaattatatgtgtcggtgtcggacac 29163376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 337
Target Start/End: Original strand, 38503318 - 38503377
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||  ||||||||||||||||||| ||| |||| |||||| |||| |||||||||    
T  38503318 ccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgt 38503377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 1262892 - 1262926
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||||||||||||||||| ||||    
T  1262892 taataatttgagaaaatcacataattcaatataat 1262926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 345
Target Start/End: Complemental strand, 7988503 - 7988445
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||| ||||| | |||||||||||||||||||||  ||| ||||| |||||||    
T  7988503 ataataatttaagaaagtgacataattcaatgtaatcataagtgttggtgtcggacaca 7988445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Complemental strand, 12443511 - 12443477
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||||||||||||||| ||||||    
T  12443511 taataatttgagaaaatcacataattcagtgtaat 12443477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 273 - 339
Target Start/End: Original strand, 12993187 - 12993253
Alignment:
Q  273 agatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||||||  |||||||||  | |||| || |||||||||||||| |||| |||||||||||    
T  12993187 agatgccgacaccgctaataatttacgtaaattacgtaattcaatgtaattatatatgtcggtgttg 12993253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Complemental strand, 25098617 - 25098567
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||  | |||||||||||||||||||||||||| |||||| ||||    
T  25098617 gccgacaccgctgataatttgagaaaatcacataattcagtgtaattatat 25098567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 30749858 - 30749904
Alignment:
Q  298 agaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||| |||||| |||| ||||||||| ||||||    
T  30749858 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30749904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 30771309 - 30771355
Alignment:
Q  298 agaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||| |||||| |||| ||||||||| ||||||    
T  30771309 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 30771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 31015051 - 31015085
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||||||||||||||| ||||||    
T  31015051 taataatttgagaaaatcacataattcagtgtaat 31015085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 34371728 - 34371770
Alignment:
Q  295 ttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||| |||||| |||| |||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 34371770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 373054 - 373111
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||| |||| ||| | | ||||||||| ||||||||||| ||||    
T  373054 ataataatttgagaaaatgacatgatttagtttaatcatatgtgtcggtgttgaacac 373111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 398827 - 398782
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  ||||||||||| |||||||||||||||| ||||||    
T  398827 gccgacaccgctaataatttgaaaaaatcacataattcagtgtaat 398782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 1486760 - 1486711
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||| |||||||||||||||| |||||| |||  |||||||||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgt 1486711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Original strand, 19324572 - 19324609
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  19324572 ataatttgagaaaatcacataattcagtgtaattatat 19324609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 24462728 - 24462671
Alignment:
Q  288 taataatttgagaaaa-tcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||| ||||| | | |||||||| |||||| |||||||||||||||||||||    
T  24462728 taataatttgcgaaaaattatataattcagtgtaattatatctgtcggtgttggacac 24462671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 322
Target Start/End: Complemental strand, 26238178 - 26238129
Alignment:
Q  273 agatgccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||| ||||||||  ||||||||||||||||| |||||||||| ||||||    
T  26238178 agataccgacaccgctaataatttgagaaaataacataattcagtgtaat 26238129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 39828270 - 39828323
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    ||||||| |||||||||||||||||| ||||| || ||| ||||||||| ||||    
T  39828270 cgacaccaataataatttgagaaaataacatactttaatctaatcatatatgtc 39828323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 40285705 - 40285660
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||||||||||| ||||||||| |||| |||||| |||||    
T  40285705 taataatttgagaaaatcgcataattcagtgtagtcatatgtgtcg 40285660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 41017455 - 41017406
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||| |||||||| |||||||| |||| ||| |||||    
T  41017455 taataatttgagaaaatgacataatttaatgtaattatatatgttggtgt 41017406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 43609870 - 43609833
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  43609870 ataataatttgagaaaataacataattgaatgtaatca 43609833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 13436466 - 13436522
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||| || ||||||||||||||| |||||| |||| ||| ||||| ||||||    
T  13436466 taataatttaaggaaatcacataattcagtgtaattatatgtgttggtgtcggacac 13436522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 16164366 - 16164322
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    ||||||||||| |||||||||||||| |||||||| |||| ||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaattatatgtgtc 16164322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 345
Target Start/End: Original strand, 18337338 - 18337394
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||| |||||||||||||||| |||||| | |  ||||||||| |||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacaca 18337394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 278 - 322
Target Start/End: Complemental strand, 39101243 - 39101199
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||| ||||||||||||||||||| |||||||| | ||||||    
T  39101243 ccgacacatataataatttgagaaaataacataattaagtgtaat 39101199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 42325561 - 42325601
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaa 321  Q
    ||||| |||||||||||||||||| |||||||||| |||||    
T  42325561 acaccgataataatttgagaaaatgacataattcagtgtaa 42325601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 339
Target Start/End: Complemental strand, 43208332 - 43208274
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  43208332 acaccgatagtaatttgagaaaatgacataattcaatgtaatcatatctgtctgtgttg 43208274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 19737534 - 19737477
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||    
T  19737534 ataataatttgagaaaattacataattcaatgcaatcatatgtgtcggtgtttgacac 19737477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 277 - 321
Target Start/End: Original strand, 9449466 - 9449510
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaa 321  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  9449466 gccgacaccaataataatttgagaaaatcacataattcaatgtaa 9449510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 23012459 - 23012403
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||||    
T  23012459 taataatttgagaaaatcatataatttaatgtaattatatgtgtcggtgttggacac 23012403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 277 - 344
Target Start/End: Complemental strand, 28588736 - 28588669
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||  |||||||||||||||||||||||||||| |||||| |||  ||||||||| ||||||    
T  28588736 gccgacaccggtaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtcggacac 28588669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 3966498 - 3966560
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||  ||||||||||||||||||||| |||||| |||||| |||| |||||||||    
T  3966498 atgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 3966560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 17925224 - 17925174
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||||||    
T  17925224 ataataatttaagaaaatcacataattcaatgtaataatatgtgtcggtgt 17925174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 28296327 - 28296385
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||| ||| |||||    
T  28296327 cgacaccgataataatttgagaaaatgacataattcaatgtactcatatgtgttggtgt 28296385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 339
Target Start/End: Complemental strand, 38749641 - 38749563
Alignment:
Q  261 gcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||  || ||| ||||||| |||||||||||| ||||| ||||||||||||||||| |||| ||| |||||||    
T  38749641 gcacaaacacggacatgtcgacaccgataataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttg 38749563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 22423863 - 22423814
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||||||    
T  22423863 taataatttgagaaaatcacataattcaatataattatatatgtcggtgt 22423814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 343
Target Start/End: Original strand, 23220982 - 23221046
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggaca 343  Q
    |||||||  ||||||||||| |||||||||||||| | ||| ||||||| |||||||||||||||    
T  23220982 cgacaccgctaataatttgataaaatcacataatttagtgttatcatatgtgtcggtgttggaca 23221046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 30502439 - 30502383
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||| ||||||| |||||| |||| ||||||||| ||||||    
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30502383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 30542782 - 30542726
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||| ||||||| |||||| |||| ||||||||| ||||||    
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcggacac 30542726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 18607149 - 18607110
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  18607149 ataataatttgagaaaataacataattcaatgtaatcata 18607110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 30098334 - 30098381
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggt 335  Q
    ||||||||||||||||||||||||||||||||||| |||  |||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggt 30098381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 11596507 - 11596469
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  11596507 ataataatttgagaaaatgacataattcaatgtaatcat 11596469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 2577241 - 2577192
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||| |||||||||||||||||| |||||||| | |||||||||||    
T  2577241 ccgacaccgataataatttgagaaaatgacataatttagtgtaatcatat 2577192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 6471940 - 6471891
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||||| |||||| |||| ||| |||||    
T  6471940 taataatttgagaaaatcacataattcagtgtaattatatgtgtgggtgt 6471891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 32630794 - 32630737
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||| |||||||||||||||||| | ||||||||||||||| |||| |||| ||||    
T  32630794 gacaccgataataatttgagaaaattatataattcaatgtaattatatgtgtcagtgt 32630737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 279 - 332
Target Start/End: Original strand, 39424640 - 39424693
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    ||||||| |||||||||||||||||| |||| |||||||||| ||| |||||||    
T  39424640 cgacaccaataataatttgagaaaatgacatgattcaatgtattcacatctgtc 39424693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Complemental strand, 14818354 - 14818303
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||||||||| | |||||||||||||||| ||||| |||||||||||    
T  14818354 ataataatttgagaaa-tgacataattcaatgtaaacatatgtgtcggtgttg 14818303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 275 - 343
Target Start/End: Complemental strand, 16203859 - 16203791
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggaca 343  Q
    ||||||||||   |||||||||||||||||| ||||||| | |||||| |||| ||||||||| |||||    
T  16203859 atgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgtcggtgtcggaca 16203791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 18592058 - 18592130
Alignment:
Q  265 aaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||| ||| |||||||||||  ||||| ||| ||||||| ||||||||||||||||| |||| || ||||||    
T  18592058 aaacactgatatgccgacaccgctaatattttaagaaaattacataattcaatgtaattatatgtgccggtgt 18592130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 38806907 - 38806851
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    |||||| ||||||||||||||| || |||| ||||||||||| ||||| ||||||||    
T  38806907 gacaccaataataatttgagaatatgacatgattcaatgtaagcatatgtgtcggtg 38806851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 6247619 - 6247686
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||| | ||||||||||| |||||||||||||||| |||||| | |  ||||||||| ||||||    
T  6247619 gccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacac 6247686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 2039909 - 2039863
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||||  ||||||||||||||||| |||| |||||||||||||||    
T  2039909 cgacaccggtaataatttgagaaaatgacatgattcaatgtaatcat 2039863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 11685934 - 11685996
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||  ||||||||||||||| || ||||||| | |||||| |||| |||||||||    
T  11685934 atgccgacaccgctaataatttgagaaagtcgcataatttagtgtaattatatgtgtcggtgt 11685996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 18421890 - 18421836
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||||||||||||||| || |||||| |||| |||||| || ||||||    
T  18421890 ataatttgagaaaatcacataatccagtgtaattatatgtgtcggcgtcggacac 18421836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 275 - 345
Target Start/End: Complemental strand, 21191120 - 21191050
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    ||||||||||   ||||||||||| |||||||||||||||| |||||| | |  ||||||||| |||||||    
T  21191120 atgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacaca 21191050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 325
Target Start/End: Complemental strand, 21194253 - 21194219
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaatcat 325  Q
    ||||||||||||||||||||||||| |||||||||    
T  21194253 taatttgagaaaatcacataattcagtgtaatcat 21194219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 31084331 - 31084365
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||||| |||||||||||||||||||||||    
T  31084331 taataatttgaaaaaatcacataattcaatgtaat 31084365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 326
Target Start/End: Original strand, 31264446 - 31264484
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcata 326  Q
    ||||||||||||||||| |||||||||| ||||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcata 31264484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 40211963 - 40212013
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| |||||||||| |||||||||||| ||||||||| | |||||||    
T  40211963 ataataaattgagaaaattacataattcaatataatcatatgtatcggtgt 40212013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 344
Target Start/End: Original strand, 42029770 - 42029816
Alignment:
Q  298 agaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||||||||||||||||| |||| | ||||||| ||||||    
T  42029770 agaaaatcacataattcaatgtaattatatgtatcggtgtcggacac 42029816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 374 - 419
Target Start/End: Original strand, 52015 - 52060
Alignment:
Q  374 attaaaatatatgctttgaaagaagaattcatcataagtttcttta 419  Q
    ||||||||||||| |||||| |||||||| |||||||||| |||||    
T  52015 attaaaatatatgttttgaaggaagaattgatcataagttgcttta 52060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 4344742 - 4344787
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcat 325  Q
    |||||| |||||||||||| ||||| |||||||||| |||||||||    
T  4344742 gacaccgataataatttgaaaaaatgacataattcagtgtaatcat 4344787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 27932232 - 27932277
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  ||||||||||||||||| |||||||||| ||||||    
T  27932232 gccgacaccgctaataatttgagaaaattacataattcagtgtaat 27932277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 32444778 - 32444823
Alignment:
Q  292 aatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||| || ||||||||||||||||||| || |||||||||    
T  32444778 aatttgagaagatgacataattcaatgtaatcaaatgtgtcggtgt 32444823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 32767004 - 32766955
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||||  |||||||||||||||||| || ||||||||||||| ||||    
T  32767004 ccgacaccgctaataatttgagaaaatcgcacaattcaatgtaattatat 32766955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 343
Target Start/End: Complemental strand, 32932281 - 32932228
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggaca 343  Q
    ||||||| ||||||| | ||||| ||||||||||| || |||||||||||||||    
T  32932281 ataattttagaaaataatataatccaatgtaatcacatgtgtcggtgttggaca 32932228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 36838551 - 36838600
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||| |||||||| | |||||| |||| |||||||||    
T  36838551 taataatttgagaaaattacataatttagtgtaattatatgtgtcggtgt 36838600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 41091308 - 41091263
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||| ||||||||||||||||||||||| |||||| |||| |||||    
T  41091308 taatgatttgagaaaatcacataattcagtgtaattatatgtgtcg 41091263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 16881143 - 16881183
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||| ||||| |||||||| |||||||||||||    
T  16881143 ataataatttgaaaaaatgacataatttaatgtaatcatat 16881183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 17123056 - 17123112
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||||||||  | |  ||| |||| ||||||||||||||||    
T  17123056 taataatttgagaaaatcacataatcaagtacaattatatatgtcggtgttggacac 17123112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 17593773 - 17593725
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    |||||||||||||||||||| ||||||| |||||| |||| ||| ||||    
T  17593773 taataatttgagaaaatcacgtaattcagtgtaattatatatgttggtg 17593725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 19438353 - 19438385
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||||||||||||| ||||||    
T  19438353 ataatttgagaaaatcacataattcagtgtaat 19438385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 327
Target Start/End: Complemental strand, 24273078 - 24273042
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatat 24273042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 327
Target Start/End: Original strand, 24389136 - 24389172
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatat 24389172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 292 - 344
Target Start/End: Original strand, 34879362 - 34879414
Alignment:
Q  292 aatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||||||| |||||||| |||||| |||| ||||| ||| ||||||    
T  34879362 aatttgagaaaatcatataattcagtgtaataatatgtgtcgatgtcggacac 34879414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 287 - 327
Target Start/End: Original strand, 41600905 - 41600945
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||||| ||| |||||||| |||||||||    
T  41600905 ataataatttgagaaaattacacaattcaatataatcatat 41600945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 337
Target Start/End: Complemental strand, 240080 - 240023
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||| |||||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  240080 gacaactataataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgt 240023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 281 - 337
Target Start/End: Original strand, 18570973 - 18571029
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| |||| ||||    
T  18570973 acaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgt 18571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 342
Target Start/End: Original strand, 31026702 - 31026757
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggac 342  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||||| ||||    
T  31026702 ataataatttaagaaaatgacataattcaatgtaatcatatatgtcggtgtcggac 31026757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 4332901 - 4332983
Alignment:
Q  255 gacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||||||||| | | | | ||||||||||  ||||||||||| ||||||||||||||||||||||||  ||| |||||||||||    
T  4332901 gacacggcacagatacttacatgccgacactgataataatttgggaaaatcacataattcaatgtaat--tatgtgtcggtgttg 4332983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 10535821 - 10535772
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    ||||||||| |||||||||||||||||| |||||||||| ||||||||||    
T  10535821 gccgacaccgataataatttgagaaaatgacataattcagtgtaatcata 10535772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 18889642 - 18889593
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||| ||||||||||||||||||||| ||||||||||| |||||||||    
T  18889642 taataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgt 18889593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 896219 - 896275
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||| ||||||||||||||||| |||||||||||||||| |||||| || ||||||    
T  896219 taatagtttgagaaaatcacatatttcaatgtaatcatatgtgtcggcgtcggacac 896275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 5367200 - 5367256
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||| ||||||||||||||| |||||| |||| ||||||||| ||||||    
T  5367200 taataatttgaggaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 5367256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 18420485 - 18420434
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||||||||||||||||||||||||||||| ||| |||  |||||||||||    
T  18420485 taataatttgagaaaatcacataattcaatgcaattataagtgtcggtgttg 18420434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 21782902 - 21782835
Alignment:
Q  255 gacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||| |||||||| ||| | ||||||||   |||||||||||||||||||||||||||| ||||||    
T  21782902 gacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaat 21782835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 338
Target Start/End: Complemental strand, 44605191 - 44605140
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgtt 338  Q
    |||||||||||||||||| ||||||||||||||||| | || ||||||||||    
T  44605191 ataataatttgagaaaataacataattcaatgtaattacatgtgtcggtgtt 44605140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 18276516 - 18276578
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||  |||||||||||||||||||| ||||||| |||||| || | |||||||||    
T  18276516 atgccgacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgt 18276578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 21616759 - 21616809
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||  |||||||||||||||||||||||||||| |||||| ||||    
T  21616759 gccgacaccgctaataatttgagaaaatcacataattcagtgtaattatat 21616809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 23718024 - 23718082
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    ||||||||  ||||||||||||||| |||||||||||| |||||| |||| ||||||||    
T  23718024 ccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 24105696 - 24105754
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    ||||||||  ||||||||||||||| |||||||||||| |||||| |||| ||||||||    
T  24105696 ccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 333
Target Start/End: Complemental strand, 37411308 - 37411250
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||||  |||||||||||||||||||||||||||| ||| || |||| |||||    
T  37411308 atgccgacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtgtcg 37411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 37497127 - 37497177
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||  || ||||||||||||| ||||||||||||||    
T  37497127 ataataatttgagaaaatgccacaattcaatgtaataatatctgtcggtgt 37497177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 322
Target Start/End: Original strand, 40681982 - 40682024
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||| |||||||||||||||||| |||||||||||||||||    
T  40681982 gacaccgataataatttgagaaaatgacataattcaatgtaat 40682024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 2846961 - 2846904
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||| |||| ||| |||||||||||||||||||||| |  |||||||||||||    
T  2846961 ataataattggagacaatgacataattcaatgtaatcatatgtaccggtgttggacac 2846904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 31284056 - 31284113
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatca-tatctgtcggtgttggacac 344  Q
    ||||||||||||||||||||||||| || |||||| | ||| ||||||||||||||||    
T  31284056 taataatttgagaaaatcacataatccattgtaattattatgtgtcggtgttggacac 31284113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 34007043 - 34006986
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||| | |||||||||| ||||||||||  ||||||||| ||||||    
T  34007043 ataataatttgagaaattgacataattcagtgtaatcataggtgtcggtgtgggacac 34006986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 44860328 - 44860377
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||| ||||||||| |||||| |||| |||||||||    
T  44860328 taataatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgt 44860377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 45000893 - 45000848
Alignment:
Q  292 aatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||| ||| |||||||||||||||||| |||||||||    
T  45000893 aatttgagaaaatgacacaattcaatgtaatcatatgtgtcggtgt 45000848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 327
Target Start/End: Complemental strand, 19613665 - 19613625
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  19613665 ataataatttgagaaaataacataattcaatgtaatgatat 19613625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 25544479 - 25544527
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    ||||||| ||||||||||||||||||| | |||||||| ||||||||||    
T  25544479 ccgacacgtataataatttgagaaaatgatataattcagtgtaatcata 25544527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 34691856 - 34691800
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| ||||||| |||||||| |||||| |||| ||||||||| ||||||    
T  34691856 taataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 34691800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 34714268 - 34714212
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| ||||||| |||||||| |||||| |||| ||||||||| ||||||    
T  34714268 taataatttgataaaatcatataattcagtgtaattatatgtgtcggtgtcggacac 34714212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 39279683 - 39279735
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgg 340  Q
    ||||||| ||||||||||| |||||||| |||||| |||| ||||||||||||    
T  39279683 taataatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgttgg 39279735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 280 - 339
Target Start/End: Complemental strand, 4229467 - 4229408
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||| |||||||||| ||| ||| |||||||||| ||||||||||| ||||| |||||    
T  4229467 gacaccaataataatttaagagaatgacataattcagtgtaatcatatgtgtcgatgttg 4229408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 345
Target Start/End: Complemental strand, 20242768 - 20242721
Alignment:
Q  298 agaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||||||||||||||||| |||||| |||| ||||||||| |||||||    
T  20242768 agaaaatcacataattcagtgtaattatatgtgtcggtgtcggacaca 20242721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 30471046 - 30471093
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggt 335  Q
    ||||| ||||||||||||||||||||| ||||||| |||| |||||||    
T  30471046 taatattttgagaaaatcacataattcgatgtaattatatgtgtcggt 30471093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 36281693 - 36281732
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcatat 36281732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 8300264 - 8300214
Alignment:
Q  294 tttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| |||||||| | ||||||||||  ||||||||||||||||    
T  8300264 tttgagaaaatgacataatttagtgtaatcataagtgtcggtgttggacac 8300214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 324
Target Start/End: Complemental strand, 14450840 - 14450810
Alignment:
Q  294 tttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||||||||||||||||||||||||||    
T  14450840 tttgagaaaatcacataattcaatgtaatca 14450810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 22085004 - 22085066
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggac 342  Q
    ||||| ||||||||||| ||||||| |||||||| | ||||||||| | ||||||||| ||||    
T  22085004 gacacgtataataatttaagaaaatgacataatttagtgtaatcatttgtgtcggtgtcggac 22085066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 28677906 - 28677956
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||  ||||||||||| |||||||||||||||| |||||| ||||    
T  28677906 gccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatat 28677956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 321
Target Start/End: Original strand, 30563416 - 30563450
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaa 321  Q
    |||||||||||||||||| ||||||||||||||||    
T  30563416 ataataatttgagaaaatgacataattcaatgtaa 30563450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 31808075 - 31808141
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||  ||||||||| | |||||||||||||||| |||||| |||| |||| |||||| ||||    
T  31808075 ccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtgtcagtgttgaacac 31808141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 294 - 344
Target Start/End: Complemental strand, 43586050 - 43586000
Alignment:
Q  294 tttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| ||||||||||||||||||| |  ||||||||| ||||||    
T  43586050 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgtcggacac 43586000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 344
Target Start/End: Original strand, 5473335 - 5473392
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||| |||||||||||||||  ||||||  ||| ||||||||| ||||||    
T  5473335 ataataatttgaaaaaatcacataattcggtgtaatattatgtgtcggtgtcggacac 5473392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 10250733 - 10250770
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  10250733 ataataatttgagaaaataacacaattcaatgtaatca 10250770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 338
Target Start/End: Original strand, 16630796 - 16630853
Alignment:
Q  281 acacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgtt 338  Q
    ||||| |||||||||| ||||||| |||||||||||| |||||| || |||| |||||    
T  16630796 acaccgataataatttaagaaaatgacataattcaatttaatcacatgtgtcagtgtt 16630853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 290 - 327
Target Start/End: Complemental strand, 17520119 - 17520082
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  17520119 ataatttaagaaaatcacataattcagtgtaatcatat 17520082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Complemental strand, 29970600 - 29970555
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    |||||||||||||||||| |||| |||| ||||||||||| |||||    
T  29970600 taataatttgagaaaatcgcatagttcagtgtaatcatatgtgtcg 29970555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 336
Target Start/End: Complemental strand, 42205899 - 42205838
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    ||||| ||||| |||||||||||||||||| || ||||| ||  ||||||||| ||||||||    
T  42205899 atgccaacaccaataataatttgagaaaatgacttaattgaaaataatcatatgtgtcggtg 42205838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 340
Target Start/End: Complemental strand, 45166470 - 45166417
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgg 340  Q
    |||||||||| || |||| ||||| |||||||||| ||||| ||||||||||||    
T  45166470 ataataattttagcaaatgacatagttcaatgtaaccatatgtgtcggtgttgg 45166417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 320
Target Start/End: Original strand, 2331802 - 2331834
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgta 320  Q
    |||||||||||||||||||||||||||| ||||    
T  2331802 taataatttgagaaaatcacataattcagtgta 2331834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 339
Target Start/End: Complemental strand, 22131302 - 22131254
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||||||| ||||  ||||||||||||| || |||||||||||    
T  22131302 taatttgagaaaatgacattgttcaatgtaatcacatgtgtcggtgttg 22131254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 26787857 - 26787813
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||| |||| ||||||||||||| ||||||||| |||||||||    
T  26787857 gacaccaataaaaatttgagaaaatgacataattcgatgtaatca 26787813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 320
Target Start/End: Original strand, 27084270 - 27084302
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgta 320  Q
    ||||||||||||||||||| |||||||||||||    
T  27084270 taataatttgagaaaatcatataattcaatgta 27084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 35449521 - 35449565
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    ||||||||||||||||||||| |||||| |||||| |||| ||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtgtc 35449565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 38355933 - 38355889
Alignment:
Q  293 atttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||||||||| ||| || |||| |||||||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 38355889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 287 - 346
Target Start/End: Original strand, 20691326 - 20691385
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacacac 346  Q
    |||||||||||||||||| |||||||||| ||||||||||| |||||||||  |||||||    
T  20691326 ataataatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgtcagacacac 20691385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 278 - 344
Target Start/End: Original strand, 7928448 - 7928514
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||  ||||||||||| |||||||||||||||| |||||| |||| ||||||||| ||||||    
T  7928448 ccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 7928514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 40150623 - 40150573
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||| | |||||||||||||||||||| |||||||||    
T  40150623 ataataatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgt 40150573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 291 - 344
Target Start/End: Complemental strand, 23272042 - 23271989
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||| | |||||||| ||||||||||||| ||||||||||||||||    
T  23272042 taatttgagaaactgacataattgaatgtaatcatatgtgtcggtgttggacac 23271989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 332
Target Start/End: Original strand, 37077345 - 37077410
Alignment:
Q  267 acagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    ||||||| | ||||||||| ||||||||||||||| || ||||||||||||| |||||||| ||||    
T  37077345 acagtgacacgccgacaccgataataatttgagaatataacataattcaatggaatcatatgtgtc 37077410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 24633452 - 24633396
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||  |||||||| |||||||||||||| |||| ||||||||||||||||    
T  24633452 taataatttggaaaaatcacgtaattcaatgtaattatatgtgtcggtgttggacac 24633396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 277 - 344
Target Start/End: Original strand, 8383254 - 8383321
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||  ||||||||||||||||||| |||||||| |||||| |||  ||||||||| ||||||    
T  8383254 gccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgtcggtgtcggacac 8383321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 288 - 327
Target Start/End: Original strand, 9624649 - 9624688
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  9624649 taataatttgagaaaatcacataattcaatgtaattatat 9624688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 322
Target Start/End: Complemental strand, 46191405 - 46191362
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  46191405 cgacaccaataataatttgagaaaatcacataattaaatgtaat 46191362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 287 - 326
Target Start/End: Original strand, 52369782 - 52369821
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  52369782 ataataatttgagaaaattacataattcaatgtaatcata 52369821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 344
Target Start/End: Complemental strand, 8789599 - 8789545
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||||||||  |||||| |||| ||||||||| ||||||    
T  8789599 ataatttgagaaaatcacataattccgtgtaattatatgtgtcggtgtcggacac 8789545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 13807176 - 13807226
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||| |||||||||||||||||||||||||| |||| |||| |||||||||    
T  13807176 ataacaatttgagaaaatcacataattcaatataataatatgtgtcggtgt 13807226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 344
Target Start/End: Complemental strand, 1566472 - 1566403
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||| |||||| ||||||| |||||||||| | ||| ||||||||||  | |||||||||||||||||||    
T  1566472 atgctgacaccaataataacttgagaaaatgaaatatttcaatgtaaatacatctgtcggtgttggacac 1566403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 16789717 - 16789668
Alignment:
Q  272 gagatgccgacacctataataatttgagaaaatcacataattcaatgtaa 321  Q
    |||||||||||||  |||||||||||||||||| |||||||||| |||||    
T  16789717 gagatgccgacacagataataatttgagaaaatgacataattcagtgtaa 16789668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 25074786 - 25074835
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    ||||||||| |||||||||||||||||| |||||||| | ||||||||||    
T  25074786 gccgacaccgataataatttgagaaaatgacataattgagtgtaatcata 25074835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 25093510 - 25093567
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    |||| |||||||||||||||| |||||| |||||| |||| ||||||||| |||||||    
T  25093510 taatgatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcggacaca 25093567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 275 - 332
Target Start/End: Complemental strand, 32804604 - 32804547
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtc 332  Q
    |||||||||||  |||||||||||||||||||||||||| | |||||| |||| ||||    
T  32804604 atgccgacaccgttaataatttgagaaaatcacataatttagtgtaattatatgtgtc 32804547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 298 - 343
Target Start/End: Original strand, 35222956 - 35223001
Alignment:
Q  298 agaaaatcacataattcaatgtaatcatatctgtcggtgttggaca 343  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||    
T  35222956 agaaaatcacataattcaatgtaattatatgtgtcggtgtcggaca 35223001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 10954960 - 10955016
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| |||||||||||||||| |||||||| |  ||||||||| ||||||    
T  10954960 taataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtcggacac 10955016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 45451561 - 45451617
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||||||||||||||| |||| | |||| |||| ||||||||| ||||||    
T  45451561 taataatttgagaaaatcacatacttcagtataataatatgtgtcggtgtcggacac 45451617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 277 - 337
Target Start/End: Complemental strand, 48202331 - 48202271
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| | |||||| |||||||||||||||||||| |||||||| |||| |||| ||||    
T  48202331 gccgacatccataatagtttgagaaaatcacataatttaatgtaattatatgtgtctgtgt 48202271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 288 - 344
Target Start/End: Complemental strand, 49505205 - 49505149
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||||||||||||| | |||||| |||| |||| |||| ||||||    
T  49505205 taataatttgagaaaatcacataatttagtgtaattatatgtgtcagtgtcggacac 49505149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 335
Target Start/End: Complemental strand, 10690313 - 10690266
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggt 335  Q
    ||||||| |||||||||||||||||||| |||||| |||| |||||||    
T  10690313 taataatctgagaaaatcacataattcagtgtaattatatttgtcggt 10690266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 322
Target Start/End: Original strand, 12704056 - 12704087
Alignment:
Q  291 taatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||||||||||||||||||||||||||    
T  12704056 taatttgagaaaatcacataattcaatgtaat 12704087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 326
Target Start/End: Complemental strand, 12704709 - 12704670
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  12704709 ataataatttgaaaaaatgacataattcaatgtaatcata 12704670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 345
Target Start/End: Original strand, 13414487 - 13414534
Alignment:
Q  298 agaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    ||||||||| ||||||||||||||| |||| ||||||||| |||||||    
T  13414487 agaaaatcaaataattcaatgtaattatatgtgtcggtgtcggacaca 13414534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 24633761 - 24633800
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattc 314  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  24633761 atgccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 27513715 - 27513664
Alignment:
Q  287 ataataatttgagaaaa-tcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||| | |||| ||||||||||||||||| |||||||||    
T  27513715 ataataatttgagaaaaatgacattattcaatgtaatcatatgtgtcggtgt 27513664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 322
Target Start/End: Complemental strand, 41319370 - 41319327
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||    
T  41319370 cgacaccaataataatttgaaaaaatgacataattcaatgtaat 41319327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 333
Target Start/End: Complemental strand, 51512232 - 51512189
Alignment:
Q  290 ataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    ||||||||| ||||||||||||||||||| |||||||| |||||    
T  51512232 ataatttgataaaatcacataattcaatggaatcatatgtgtcg 51512189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 8039203 - 8039265
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||||||  || |||||||||||||||  ||| ||||||||||||||||  |||||||||||    
T  8039203 gccgacactgatgataatttgagaaaatggcatgattcaatgtaatcataggtgtcggtgttg 8039265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 288 - 322
Target Start/End: Original strand, 11251986 - 11252020
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||||||||||||||||||||| ||||||    
T  11251986 taataatttgagaaaatcacataattcagtgtaat 11252020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 277 - 327
Target Start/End: Original strand, 12704004 - 12704054
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||||  |||||||||||||||| ||||||||||| |||||| ||||    
T  12704004 gccgacaccactaataatttgagaaaagcacataattcagtgtaattatat 12704054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 35160727 - 35160777
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||| |||| |||||||||||||||  ||||| |||||||||    
T  35160727 ataataatttgagtaaataacataattcaatgtagccatatgtgtcggtgt 35160777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 40697910 - 40697860
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||| ||||||||| |||||||||||| ||| ||||| |||||||||    
T  40697910 ataataatatgagaaaatgacataattcaatctaaccatatgtgtcggtgt 40697860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 345
Target Start/End: Original strand, 1502582 - 1502639
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacaca 345  Q
    ||||||| | ||||||| |||||||| |||||||||| || |||| ||||||||||||    
T  1502582 taataatctaagaaaatgacataattgaatgtaatcacatgtgtctgtgttggacaca 1502639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 321
Target Start/End: Original strand, 5339116 - 5339149
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaa 321  Q
    |||||||||||||||||||||||||| |||||||    
T  5339116 taataatttgagaaaatcacataatttaatgtaa 5339149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 5407309 - 5407264
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  ||| |||||||||||||||||||||||| ||||||    
T  5407309 gccgacaccgctaaaaatttgagaaaatcacataattcattgtaat 5407264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 339
Target Start/End: Complemental strand, 5441115 - 5441033
Alignment:
Q  255 gacacggcacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||| |||| ||| ||| | |||| ||||  ||| ||||||||||||||||||||||||||| |||  ||| |||||||||||    
T  5441115 gacacgacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattcaatggaat--tatgtgtcggtgttg 5441033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 7614466 - 7614417
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||| |||||||||||||||||| | |||| |||| |||||||||    
T  7614466 taataatttaagaaaatcacataattcagtataattatatatgtcggtgt 7614417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 8039886 - 8039837
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||||||||| | |||||||| |||||| |||| |||||||||    
T  8039886 taataatttgagaaaattatataattcagtgtaattatatgtgtcggtgt 8039837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Complemental strand, 9210877 - 9210840
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  9210877 ataataatttgagaaaatgacataattcaatggaatca 9210840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 9800037 - 9800074
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattc 314  Q
    |||||||||| ||||||||||||||||| |||||||||    
T  9800037 gccgacacctctaataatttgagaaaattacataattc 9800074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 337
Target Start/End: Original strand, 13799504 - 13799561
Alignment:
Q  280 gacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||| |||||| ||||||||||| |||||||| | |||||| |||| |||||||||    
T  13799504 gacaccgataatagtttgagaaaatgacataattaagtgtaataatatgtgtcggtgt 13799561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 278 - 327
Target Start/End: Complemental strand, 16192811 - 16192762
Alignment:
Q  278 ccgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    ||||||||  ||||||||||||||||| |||||||||| |||||| ||||    
T  16192811 ccgacaccgttaataatttgagaaaataacataattcagtgtaattatat 16192762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 21149074 - 21149111
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  21149074 ataataatttgagaaaatgacataattcagtgtaatca 21149111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 21720761 - 21720806
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||| ||||||||||||||| ||| ||||||||| ||||||    
T  21720761 gccgacaccgataataatttgagaatatctcataattcagtgtaat 21720806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 39002044 - 39002089
Alignment:
Q  292 aatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| ||||||||||||||||||||||| |||| |||| ||||    
T  39002044 aatttgaaaaaatcacataattcaatgtaattatatatgtcagtgt 39002089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 326
Target Start/End: Complemental strand, 3730218 - 3730178
Alignment:
Q  286 tataataatttgagaaaatcacataattcaatgtaatcata 326  Q
    ||||||||||||||| ||| |||||||||| ||||||||||    
T  3730218 tataataatttgagataatgacataattcagtgtaatcata 3730178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 327
Target Start/End: Complemental strand, 11493421 - 11493373
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatat 327  Q
    |||||||  ||||||| |||||||||||||||||||| |||||| ||||    
T  11493421 cgacaccactaataatgtgagaaaatcacataattcagtgtaattatat 11493373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 277 - 337
Target Start/End: Original strand, 18426946 - 18427006
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||  ||||||||| | |||||||||||||||  |||||| |||| |||||||||    
T  18426946 gccgacaccactaataatttcaaaaaatcacataattcggtgtaattatatatgtcggtgt 18427006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 339
Target Start/End: Original strand, 21478682 - 21478742
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    ||||||| |||||||||| | || || |||||| ||||||||||||||| ||| |||||||    
T  21478682 cgacaccaataataatttcacaagatgacataaatcaatgtaatcatatgtgttggtgttg 21478742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 29508452 - 29508504
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttgg 340  Q
    ||||||||||| ||||||| |||||||| |||||| |||| ||||| ||||||    
T  29508452 taataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttgg 29508504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 40017426 - 40017386
Alignment:
Q  282 cacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||| |||| ||||||||||||| |||||||||||||||||    
T  40017426 caccaataacaatttgagaaaatgacataattcaatgtaat 40017386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 300 - 344
Target Start/End: Complemental strand, 40993374 - 40993330
Alignment:
Q  300 aaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    |||||||||||||||| |||||| |||| ||||||||| ||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcggtgtcggacac 40993330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 277 - 339
Target Start/End: Original strand, 28847 - 28909
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttg 339  Q
    |||||||||  ||||||||| |||||||| |||||||||||||||| |||| |||||||||||    
T  28847 gccgacaccgttaataatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttg 28909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 275 - 337
Target Start/End: Complemental strand, 9811 - 9749
Alignment:
Q  275 atgccgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||| ||  |||||||||||||||||||| ||||||| |||||| |||| |||||||||    
T  9811 atgccgacgccactaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgt 9749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 279 - 337
Target Start/End: Original strand, 99892 - 99950
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||| |||| ||| |||||    
T  99892 cgacaccgataataattttagaaaataacataattcaatgtaattatatgtgttggtgt 99950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 333
Target Start/End: Original strand, 90851 - 90896
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcg 333  Q
    ||||||||||||||||||| |||||||| |||||| |||| |||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 262 - 319
Target Start/End: Original strand, 26375 - 26432
Alignment:
Q  262 cacaaacagtgagatgccgacacctataataatttgagaaaatcacataattcaatgt 319  Q
    |||| ||||||| | | |||||||  ||||||||||||||||||||||||||||||||    
T  26375 cacagacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgt 26432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 135363 - 135314
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    |||||||||||||||||||||||||||  |||||| |||| |||||||||    
T  135363 taataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgt 135314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 44572 - 44529
Alignment:
Q  292 aatttgagaaaatcacataattcaatgtaatcatatctgtcggt 335  Q
    |||||||||||||||||||||||| |||||| |||| |||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcggt 44529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 336
Target Start/End: Original strand, 53189 - 53236
Alignment:
Q  289 aataatttgagaaaatcacataattcaatgtaatcatatctgtcggtg 336  Q
    ||||||||||||||||||||||||||| |||||| |||  ||||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtg 53236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 287 - 324
Target Start/End: Original strand, 7697 - 7734
Alignment:
Q  287 ataataatttgagaaaatcacataattcaatgtaatca 324  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  7697 ataataatttgagaaaatgacataattcaatgcaatca 7734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 6320 - 6369
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgt 337  Q
    ||||||||||| |||||  |||||||||||||||| |||| |||||||||    
T  6320 taataatttgacaaaattgcataattcaatgtaattatatgtgtcggtgt 6369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Complemental strand, 225330 - 225285
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    ||||||||  |||||||||||||||||| ||||||| |||||||||    
T  225330 gccgacacagataataatttgagaaaatgacataatacaatgtaat 225285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 92804 - 92849
Alignment:
Q  277 gccgacacctataataatttgagaaaatcacataattcaatgtaat 322  Q
    |||||||||  ||||||||||||||||| |||||||||| ||||||    
T  92804 gccgacaccgctaataatttgagaaaattacataattcagtgtaat 92849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 344
Target Start/End: Original strand, 70286 - 70342
Alignment:
Q  288 taataatttgagaaaatcacataattcaatgtaatcatatctgtcggtgttggacac 344  Q
    ||||||||||| ||||| |||||||||| |||||| |||  ||||||||| ||||||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcggtgtcggacac 70342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 18168 - 18124
Alignment:
Q  279 cgacacctataataatttgagaaaatcacataattcaatgtaatc 323  Q
    ||||||| |||| | ||||||||||| ||||||||||||||||||    
T  18168 cgacaccgataaaattttgagaaaataacataattcaatgtaatc 18124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University