View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19179_low_6 (Length: 432)
Name: NF19179_low_6
Description: NF19179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19179_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 423
Target Start/End: Original strand, 25177864 - 25178269
Alignment:
| Q |
16 |
ataatatagtgaaaatgaaaacatcactataaccggttaccgaccccatcaattaacatcaaatatttatgtaagtataatatttacatccgtatcatgt |
115 |
Q |
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| T |
25177864 |
ataatatagtgaaaatgaaaacatcactataaccggttaccgaccccatcaattaacatcaaatatttatgtaagtataatatttacatccgtatcatgt |
25177963 |
T |
|
| Q |
116 |
caaagacaatnnnnnnnnnnnnnnnnnnntgcattgcaaaattcaaagacttgtcctagtttatttcgatgattattcatgttaaacgttatgctaatat |
215 |
Q |
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| T |
25177964 |
caaagacaat-aaaaaaaaatccaaaaaatgcattgcaaaattcaaagaattatcctagtttatttcgatcattattcatgttaaacgttatgctaatat |
25178062 |
T |
|
| Q |
216 |
ttctacacatcattaagttggaannnnnnnnnnaagtatgtagagaaatgtcatgtttgttttacctagaataagaacttaatgatattcttatttccat |
315 |
Q |
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|||||||||||||| |||||| | || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |
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| T |
25178063 |
ttctacacatcatttagttgg-attttttttttaattatgtagagaaatgtcatgtttgttttacctagattaagaacttaatgatattcttttttccat |
25178161 |
T |
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| Q |
316 |
caaaactaacgataaaagaaattttgtaaacaaagnnnnnnnncatgaacaaagaaatatgtgcatcc-tcctcttctagagagaatggaatggaaatag |
414 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||| |||||||| |||||||||||||||||||||| |
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| T |
25178162 |
caaaactaacgataaaagaaattttgtaaacaaag-aaaaaaacatgaacaaaaaaatatttgcatccttcctcttcaagagagaatggaatggaaatag |
25178260 |
T |
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| Q |
415 |
ggtgaccta |
423 |
Q |
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| T |
25178261 |
ggtgaccta |
25178269 |
T |
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