View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1917_low_2 (Length: 466)

Name: NF1917_low_2
Description: NF1917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1917_low_2
NF1917_low_2
[»] chr6 (41 HSPs)
chr6 (245-448)||(15430167-15430370)
chr6 (245-448)||(16561016-16561219)
chr6 (248-450)||(27028911-27029113)
chr6 (245-448)||(15402787-15402990)
chr6 (245-448)||(15414574-15414777)
chr6 (245-448)||(27034749-27034952)
chr6 (245-448)||(26983688-26983891)
chr6 (245-450)||(26994592-26994798)
chr6 (245-448)||(27645631-27645835)
chr6 (245-450)||(16763078-16763283)
chr6 (248-450)||(14135249-14135451)
chr6 (248-450)||(14147321-14147523)
chr6 (245-450)||(16744676-16744881)
chr6 (248-450)||(28159535-28159737)
chr6 (248-450)||(28170576-28170778)
chr6 (248-450)||(4217758-4217960)
chr6 (246-339)||(8722255-8722348)
chr6 (246-339)||(16303952-16304045)
chr6 (246-343)||(16588215-16588313)
chr6 (246-343)||(16607067-16607165)
chr6 (246-339)||(23983611-23983704)
chr6 (246-339)||(25653153-25653246)
chr6 (246-339)||(8729242-8729335)
chr6 (246-339)||(18842454-18842547)
chr6 (246-339)||(21709778-21709871)
chr6 (246-339)||(24919572-24919665)
chr6 (246-339)||(28256886-28256979)
chr6 (246-339)||(28335635-28335728)
chr6 (246-343)||(16088866-16088963)
chr6 (246-339)||(21359520-21359613)
chr6 (246-339)||(23963502-23963595)
chr6 (246-339)||(28303336-28303429)
chr6 (246-339)||(3042803-3042895)
chr6 (246-339)||(27048199-27048292)
chr6 (246-339)||(27058443-27058536)
chr6 (150-184)||(16561279-16561313)
chr6 (246-339)||(16644445-16644538)
chr6 (376-424)||(16588135-16588183)
chr6 (376-424)||(16607197-16607245)
chr6 (376-424)||(21709907-21709955)
chr6 (376-424)||(23926696-23926744)
[»] chr5 (22 HSPs)
chr5 (245-448)||(32450246-32450449)
chr5 (245-448)||(29882737-29882941)
chr5 (245-450)||(23431445-23431652)
chr5 (245-450)||(35397317-35397523)
chr5 (248-450)||(33787054-33787255)
chr5 (248-444)||(20194438-20194634)
chr5 (248-450)||(33772097-33772304)
chr5 (246-343)||(26176167-26176264)
chr5 (246-339)||(23026607-23026700)
chr5 (246-339)||(23636438-23636531)
chr5 (246-339)||(23836360-23836453)
chr5 (246-339)||(23983897-23983990)
chr5 (246-332)||(25194640-25194726)
chr5 (246-332)||(25210064-25210150)
chr5 (246-332)||(25274221-25274307)
chr5 (246-339)||(21851632-21851725)
chr5 (251-332)||(35872204-35872285)
chr5 (246-339)||(31549247-31549340)
chr5 (248-332)||(18083104-18083188)
chr5 (150-184)||(23431348-23431382)
chr5 (380-424)||(12171374-12171418)
chr5 (380-424)||(12180803-12180847)
[»] chr4 (28 HSPs)
chr4 (245-448)||(13440205-13440408)
chr4 (245-448)||(30277446-30277649)
chr4 (245-450)||(20307974-20308179)
chr4 (245-450)||(24582709-24582915)
chr4 (245-450)||(24597537-24597743)
chr4 (245-423)||(17008616-17008793)
chr4 (245-423)||(17022580-17022757)
chr4 (245-423)||(5404841-5405020)
chr4 (248-450)||(11926840-11927042)
chr4 (248-450)||(24810160-24810362)
chr4 (250-444)||(5200713-5200908)
chr4 (249-343)||(40562226-40562320)
chr4 (246-343)||(18009221-18009318)
chr4 (246-339)||(19646014-19646107)
chr4 (246-339)||(19773701-19773794)
chr4 (246-339)||(25248258-25248351)
chr4 (247-339)||(34841880-34841972)
chr4 (246-339)||(14719649-14719742)
chr4 (246-339)||(14737891-14737984)
chr4 (246-339)||(24923694-24923787)
chr4 (246-339)||(55587080-55587173)
chr4 (246-339)||(26211520-26211613)
chr4 (246-339)||(26220279-26220372)
chr4 (273-339)||(17142278-17142344)
chr4 (312-343)||(12426343-12426374)
chr4 (380-424)||(14719784-14719828)
chr4 (380-424)||(14738026-14738070)
chr4 (376-424)||(24923609-24923657)
[»] chr2 (22 HSPs)
chr2 (245-448)||(12650116-12650319)
chr2 (245-448)||(12665038-12665241)
chr2 (245-450)||(23120580-23120786)
chr2 (245-448)||(5392595-5392799)
chr2 (245-447)||(33844237-33844439)
chr2 (248-444)||(24044412-24044609)
chr2 (248-447)||(34856344-34856544)
chr2 (248-447)||(34871406-34871606)
chr2 (246-344)||(42244596-42244695)
chr2 (246-343)||(16273796-16273893)
chr2 (246-343)||(16282955-16283052)
chr2 (246-339)||(22186324-22186417)
chr2 (246-339)||(27682067-27682160)
chr2 (246-339)||(31355862-31355955)
chr2 (246-339)||(34684713-34684806)
chr2 (246-338)||(25262839-25262931)
chr2 (246-339)||(21150427-21150520)
chr2 (250-339)||(28480340-28480429)
chr2 (248-318)||(26266505-26266575)
chr2 (150-184)||(23120849-23120883)
chr2 (380-424)||(3756176-3756220)
chr2 (380-424)||(3766228-3766272)
[»] chr1 (13 HSPs)
chr1 (245-448)||(20322185-20322388)
chr1 (248-450)||(28149279-28149481)
chr1 (248-450)||(28159753-28159955)
chr1 (246-343)||(16134286-16134383)
chr1 (245-343)||(3351694-3351792)
chr1 (245-343)||(20501250-20501348)
chr1 (246-329)||(18701701-18701784)
chr1 (246-339)||(34337714-34337807)
chr1 (246-339)||(22478799-22478892)
chr1 (246-339)||(22471748-22471841)
chr1 (254-332)||(5136882-5136960)
chr1 (248-318)||(24653714-24653784)
chr1 (248-318)||(26797347-26797417)
[»] chr7 (43 HSPs)
chr7 (245-450)||(5122806-5123011)
chr7 (245-450)||(30307476-30307682)
chr7 (245-450)||(5157759-5157964)
chr7 (245-449)||(26750528-26750733)
chr7 (248-450)||(45730361-45730563)
chr7 (248-450)||(45741263-45741465)
chr7 (245-447)||(11415184-11415387)
chr7 (245-447)||(11430168-11430371)
chr7 (248-450)||(7232250-7232452)
chr7 (248-450)||(26504923-26505125)
chr7 (248-450)||(39202190-39202392)
chr7 (248-450)||(39213561-39213763)
chr7 (248-444)||(15354127-15354323)
chr7 (245-401)||(20591875-20592032)
chr7 (248-444)||(5245366-5245563)
chr7 (248-398)||(26496609-26496759)
chr7 (246-343)||(16243785-16243882)
chr7 (246-343)||(16226907-16227004)
chr7 (246-343)||(16544578-16544675)
chr7 (246-343)||(16620987-16621084)
chr7 (374-450)||(15602946-15603022)
chr7 (246-339)||(16121635-16121728)
chr7 (246-339)||(16148374-16148467)
chr7 (246-339)||(29022534-29022627)
chr7 (246-339)||(29030972-29031065)
chr7 (246-343)||(29081091-29081188)
chr7 (246-343)||(29095850-29095947)
chr7 (246-343)||(44076157-44076254)
chr7 (246-339)||(17210431-17210524)
chr7 (246-339)||(27434354-27434447)
chr7 (246-339)||(27443384-27443477)
chr7 (246-343)||(16910825-16910923)
chr7 (246-339)||(27966910-27967003)
chr7 (246-339)||(27976363-27976456)
chr7 (248-332)||(35971153-35971237)
chr7 (248-332)||(35992565-35992649)
chr7 (248-318)||(14930671-14930741)
chr7 (150-184)||(11415088-11415122)
chr7 (150-184)||(11430072-11430106)
chr7 (150-184)||(30307744-30307778)
chr7 (376-444)||(10441313-10441381)
chr7 (380-424)||(29022448-29022492)
chr7 (380-424)||(29030886-29030930)
[»] scaffold0089 (1 HSPs)
scaffold0089 (245-448)||(52472-52676)
[»] chr3 (44 HSPs)
chr3 (245-448)||(9529534-9529738)
chr3 (245-448)||(8227545-8227748)
chr3 (245-448)||(18002137-18002340)
chr3 (246-448)||(10599800-10600003)
chr3 (245-444)||(8345529-8345729)
chr3 (245-444)||(10413215-10413413)
chr3 (245-450)||(14452471-14452677)
chr3 (248-450)||(4622783-4622985)
chr3 (248-450)||(4633765-4633967)
chr3 (248-444)||(18045787-18045984)
chr3 (248-444)||(18061851-18062048)
chr3 (248-450)||(4448757-4448959)
chr3 (245-447)||(8581151-8581353)
chr3 (248-450)||(28012141-28012343)
chr3 (248-444)||(34801971-34802168)
chr3 (248-444)||(4683531-4683727)
chr3 (248-444)||(4693620-4693816)
chr3 (245-423)||(4888013-4888193)
chr3 (245-423)||(20053498-20053676)
chr3 (245-423)||(20076158-20076336)
chr3 (248-450)||(28358944-28359139)
chr3 (248-419)||(1776165-1776337)
chr3 (248-423)||(5517313-5517489)
chr3 (246-343)||(27977918-27978015)
chr3 (246-343)||(13274048-13274145)
chr3 (246-339)||(2216098-2216191)
chr3 (246-343)||(4504561-4504658)
chr3 (246-343)||(10721855-10721952)
chr3 (246-339)||(17563839-17563932)
chr3 (246-339)||(31277885-31277978)
chr3 (246-339)||(1479209-1479302)
chr3 (246-339)||(7064788-7064881)
chr3 (246-339)||(7097633-7097726)
chr3 (246-339)||(16289966-16290059)
chr3 (246-344)||(6294658-6294756)
chr3 (246-339)||(11261836-11261928)
chr3 (150-184)||(8227450-8227484)
chr3 (150-184)||(8345791-8345825)
chr3 (150-184)||(9529798-9529832)
chr3 (150-184)||(10413474-10413508)
chr3 (312-344)||(27339881-27339913)
chr3 (306-343)||(18040305-18040342)
chr3 (380-424)||(10721990-10722034)
chr3 (380-424)||(24217257-24217301)
[»] scaffold0112 (1 HSPs)
scaffold0112 (245-448)||(10939-11143)
[»] chr8 (21 HSPs)
chr8 (245-450)||(15778530-15778736)
chr8 (245-450)||(15768117-15768323)
chr8 (245-450)||(14360294-14360500)
chr8 (245-447)||(21925951-21926155)
chr8 (248-450)||(3716774-3716976)
chr8 (247-447)||(28262052-28262253)
chr8 (248-450)||(40699376-40699578)
chr8 (245-403)||(31340342-31340501)
chr8 (246-339)||(31208635-31208728)
chr8 (246-343)||(16191551-16191648)
chr8 (246-339)||(25718124-25718217)
chr8 (246-339)||(23091886-23091979)
chr8 (246-343)||(36253453-36253550)
chr8 (246-339)||(6583770-6583863)
chr8 (248-332)||(12480786-12480870)
chr8 (415-450)||(31340497-31340532)
chr8 (150-184)||(14360198-14360232)
chr8 (150-184)||(28262317-28262351)
chr8 (306-343)||(17128535-17128572)
chr8 (376-444)||(17974773-17974841)
chr8 (376-424)||(36253582-36253630)
[»] scaffold0355 (2 HSPs)
scaffold0355 (245-413)||(17427-17595)
scaffold0355 (397-448)||(17375-17426)
[»] scaffold1848 (1 HSPs)
scaffold1848 (248-422)||(802-978)
[»] scaffold0489 (1 HSPs)
scaffold0489 (318-450)||(2298-2430)
[»] scaffold0871 (1 HSPs)
scaffold0871 (246-339)||(928-1021)
[»] scaffold0703 (1 HSPs)
scaffold0703 (246-336)||(6507-6597)
[»] scaffold0853 (1 HSPs)
scaffold0853 (246-339)||(4674-4767)
[»] scaffold0609 (1 HSPs)
scaffold0609 (246-339)||(2045-2138)
[»] scaffold0455 (1 HSPs)
scaffold0455 (246-339)||(4713-4806)
[»] scaffold0077 (1 HSPs)
scaffold0077 (246-339)||(31531-31624)
[»] scaffold0043 (1 HSPs)
scaffold0043 (246-339)||(62441-62534)
[»] scaffold1547 (1 HSPs)
scaffold1547 (246-339)||(736-829)
[»] scaffold1481 (2 HSPs)
scaffold1481 (246-343)||(608-705)
scaffold1481 (380-424)||(527-571)
[»] scaffold0047 (1 HSPs)
scaffold0047 (246-339)||(82546-82639)
[»] scaffold0046 (1 HSPs)
scaffold0046 (246-339)||(37089-37182)
[»] scaffold1380 (1 HSPs)
scaffold1380 (260-339)||(1838-1917)
[»] scaffold0222 (1 HSPs)
scaffold0222 (246-339)||(19113-19206)
[»] scaffold0070 (1 HSPs)
scaffold0070 (248-318)||(51813-51883)
[»] scaffold0144 (1 HSPs)
scaffold0144 (246-339)||(1134-1227)
[»] scaffold1376 (1 HSPs)
scaffold1376 (248-332)||(1463-1547)
[»] scaffold0001 (1 HSPs)
scaffold0001 (272-324)||(47648-47700)
[»] scaffold0431 (1 HSPs)
scaffold0431 (312-343)||(3601-3632)


Alignment Details
Target: chr6 (Bit Score: 167; Significance: 3e-89; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 15430167 - 15430370
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15430167 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 15430266  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15430267 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 15430366  T
Q  445 aaaa 448  Q
    ||||    
T  15430367 aaaa 15430370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 16561219 - 16561016
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16561219 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 16561120  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16561119 caataaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 16561020  T
Q  445 aaaa 448  Q
    ||||    
T  16561019 aaaa 16561016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 27029113 - 27028911
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  27029113 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccaa 27029014  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27029013 aaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacacaaaa 27028914  T
Q  448 agt 450  Q
    |||    
T  27028913 agt 27028911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 15402787 - 15402990
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15402787 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactgtatcaaagatccaagggtc 15402886  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15402887 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 15402986  T
Q  445 aaaa 448  Q
    ||||    
T  15402987 aaaa 15402990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 15414574 - 15414777
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15414574 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactgtatcaaagatccaagggtc 15414673  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15414674 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 15414773  T
Q  445 aaaa 448  Q
    ||||    
T  15414774 aaaa 15414777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 27034952 - 27034749
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27034952 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 27034853  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27034852 caaaaaagagcacaaaagatagtgtaaaatgcacgaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacaca 27034753  T
Q  445 aaaa 448  Q
    ||||    
T  27034752 aaaa 27034749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 26983891 - 26983688
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26983891 aggctcagcagaatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 26983792  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26983791 caaaaaagagcacaaaagatagtgtaaaatgcacgaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacaca 26983692  T
Q  445 aaaa 448  Q
    ||||    
T  26983691 aaaa 26983688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 26994798 - 26994592
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26994798 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtt 26994699  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26994698 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacac 26994599  T
Q  444 aaaaagt 450  Q
    |||||||    
T  26994598 aaaaagt 26994592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 27645835 - 27645631
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27645835 aggctcagcaggatttaatctggaccgcgggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 27645736  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  27645735 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacac 27645636  T
Q  444 aaaaa 448  Q
    |||||    
T  27645635 aaaaa 27645631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 16763283 - 16763078
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16763283 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaagggtc 16763184  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  16763183 caaaaaaa-gcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccaaattccacac 16763085  T
Q  444 aaaaagt 450  Q
    |||||||    
T  16763084 aaaaagt 16763078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 248 - 450
Target Start/End: Original strand, 14135249 - 14135451
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||| ||||||||      
T  14135249 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagccctcaagatcacatcacagccacttgatcaaagatcaaagggtccag 14135348  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  14135349 aaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 14135448  T
Q  448 agt 450  Q
    |||    
T  14135449 agt 14135451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 248 - 450
Target Start/End: Original strand, 14147321 - 14147523
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||| ||||||||      
T  14147321 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagccctcaagatcacatcacagccacttgatcaaagatcaaagggtccag 14147420  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  14147421 aaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 14147520  T
Q  448 agt 450  Q
    |||    
T  14147521 agt 14147523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 16744881 - 16744676
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16744881 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaagggtc 16744782  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| || |||||||||    
T  16744781 caaaaaaa-gcacaaaagatagtgtaaaaatgcaggaagcacagtgaccattagatcaaagatctaacggttcaaacagaagatataccaaattccacac 16744683  T
Q  444 aaaaagt 450  Q
    |||||||    
T  16744682 aaaaagt 16744676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 28159737 - 28159535
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||| | ||||||||||| ||||||||      
T  28159737 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 28159638  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  28159637 aaaaaagcataaaagatagtgtaaaatgcaggaagcatagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 28159538  T
Q  448 agt 450  Q
    |||    
T  28159537 agt 28159535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 28170778 - 28170576
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||| | ||||||||||| ||||||||      
T  28170778 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 28170679  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  28170678 aaaaaagcataaaagatagtgtaaaatgcaggaagcatagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 28170579  T
Q  448 agt 450  Q
    |||    
T  28170578 agt 28170576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 248 - 450
Target Start/End: Original strand, 4217758 - 4217960
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | | | ||||||||||||||||||| | ||||||||||| ||||||||      
T  4217758 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagccctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 4217857  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| ||||||||||||||||||||| |||||||  || ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  4217858 aaaaaagcataaaagatagtgtaaaatgcagaaagcacagtgatcgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 4217957  T
Q  448 agt 450  Q
    |||    
T  4217958 agt 4217960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 8722255 - 8722348
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  8722255 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccattggatcaaagatccaa 8722348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 16303952 - 16304045
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||||    
T  16303952 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccacaggatctaagatccaa 16304045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 16588313 - 16588215
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa-gatccaagggt 343  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||| |||||||||||||| |||||||||||    
T  16588313 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacggccactggatcaaatgatccaagggt 16588215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 16607067 - 16607165
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa-gatccaagggt 343  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||| |||||||||||||| |||||||||||    
T  16607067 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacggccactggatcaaatgatccaagggt 16607165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 23983611 - 23983704
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  23983611 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 23983704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 25653246 - 25653153
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  25653246 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 25653153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 8729242 - 8729335
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||  ||| ||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||||| |||||||    
T  8729242 ggctcagcaggatacaatctgaaccgttggatgaatccagaggtccagatctaaattccaagatctcatcacagacactggatcaacgatccaa 8729335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 18842547 - 18842454
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||   |||| |||||||||    
T  18842547 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccatatgatctaagatccaa 18842454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 21709778 - 21709871
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| |   ||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||| |||||||||    
T  21709778 ggctcagcaggatacaatctggactattggatgaatccagaggtccagatctgaatcccaagatctcatcacagccacaggatctaagatccaa 21709871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 24919665 - 24919572
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| |||||||||||||||| ||| |||||| |||||||||| ||||||||||  |||||| |||||||||    
T  24919665 ggctcagcaggatacaatctggaccgttggatgaatccagaggcccatatctaaatcccaagatctcatcacagccgttggatctaagatccaa 24919572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 28256979 - 28256886
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | || ||||||| |||||||||||  | ||| |||||||||    
T  28256979 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatctcaagatctcatcacagccatagaatctaagatccaa 28256886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 28335728 - 28335635
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | || ||||||| |||||||||||  | ||| |||||||||    
T  28335728 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatctcaagatctcatcacagccatagaatctaagatccaa 28335635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 16088963 - 16088866
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | | ||||  |  ||| |||||||  |||||||||||||||||||    
T  16088963 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaattccaaactttcattacagccataggatcaaagatccaagggt 16088866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 21359520 - 21359613
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||| ||| | | ||||||||||||||||||||||| | | |||||||||| |||||||||||  ||||| |||||||||    
T  21359520 ggctcagcaggatctaatatggactgttggatgaatccagaggtccagatatgaatcccaagatctcatcacagccataggatctaagatccaa 21359613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 23963502 - 23963595
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||| ||| | | ||||||||||||||||||||||| | | |||||||||| |||||||||||  ||||| |||||||||    
T  23963502 ggctcagcaggatctaatatggactgttggatgaatccagaggtccagatatgaatcccaagatctcatcacagccataggatctaagatccaa 23963595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 28303429 - 28303336
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||| || |||||||| ||| ||||||||||||||||||||||||| | || ||||||| |||||||||||  | ||| |||||||||    
T  28303429 ggctcagcagtatctaatctggaccgttggatgaatccagaggtccagatctgaatctcaagatctcatcacagccatagaatctaagatccaa 28303336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 3042895 - 3042803
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||| || ||||||| ||| |||||||||||||||||||||||||||   ||||| || ||||| |||||| ||||| |||||||||    
T  3042895 ggctcagcagggtt-aatctggaccgttggatgaatccagaggtccagatctaaactccaaggtcccatcatagccacaggatctaagatccaa 3042803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 27048199 - 27048292
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||| | ||||| ||  ||||| | ||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  27048199 ggctcagcaggattaattctggaccattggattagtccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 27048292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 27058443 - 27058536
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||| | ||||| ||  ||||| | ||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  27058443 ggctcagcaggattaattctggaccattggattagtccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 27058536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 16561313 - 16561279
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  16561313 gatagggaaatatttttagaaattttttagaagca 16561279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 16644538 - 16644445
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||| |||| ||| |||||||| ||| | ||||||||||| ||||||||||| | || ||||||  |||||||||||  ||||| |||||||||    
T  16644538 ggcttagcaagatctaatctggaccgttagatgaatccaggggtccagatctgaatctcaagatttcatcacagccataggatctaagatccaa 16644445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 16588183 - 16588135
Alignment:
Q  376 caggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    |||||||||||  |||||| ||||| ||||||| |||||||||||||||    
T  16588183 caggaagcacagtgaccgtcagatccaagatctgacggttcaaacagaa 16588135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 16607197 - 16607245
Alignment:
Q  376 caggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    |||||||||||  |||||| ||||| ||||||| |||||||||||||||    
T  16607197 caggaagcacagtgaccgtcagatccaagatctgacggttcaaacagaa 16607245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 21709907 - 21709955
Alignment:
Q  376 caggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    |||| ||||||  |||||| ||||||||||||| |||||||||||||||    
T  21709907 caggcagcacagtgaccgtcagatcaaagatctgacggttcaaacagaa 21709955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 23926744 - 23926696
Alignment:
Q  376 caggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    |||||| ||||| |||||| ||||||| ||||| |||||||||||||||    
T  23926744 caggaaacacaatgaccgtcagatcaacgatctgacggttcaaacagaa 23926696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 167; Significance: 3e-89; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 32450246 - 32450449
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32450246 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 32450345  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32450346 caaaaaagagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatatatcatattccacaca 32450445  T
Q  445 aaaa 448  Q
    ||||    
T  32450446 aaaa 32450449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 29882737 - 29882941
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29882737 aggctcagcaggatttaatcttgaccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 29882836  T
Q  345 c-nnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |         |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29882837 caaaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 29882936  T
Q  444 aaaaa 448  Q
    |||||    
T  29882937 aaaaa 29882941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 23431445 - 23431652
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23431445 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 23431544  T
Q  345 c-nnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccaca 442  Q
    |         |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23431545 caaaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccaca 23431644  T
Q  443 caaaaagt 450  Q
    ||||||||    
T  23431645 caaaaagt 23431652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 35397317 - 35397523
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35397317 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 35397416  T
Q  345 -cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
               ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  35397417 aaaaaaaaaaacacaaaagatagtgtaaaatgcaggaagcacaatgaccgttagatcaaagatctaacggtttaaacagaagatataccatattccacac 35397516  T
Q  444 aaaaagt 450  Q
    |||||||    
T  35397517 aaaaagt 35397523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 33787255 - 33787054
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||| | |||||||| |||||||||||| | ||||||||||| ||||||||      
T  33787255 ctcagcaggatttaatctggaccgtttgatgaatccagaggtccagatctagcccccaagattacatcacagccattagatcaaagatcaaagggtccag 33787156  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         | ||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  33787155 aaaaag-caccaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacacaata 33787057  T
Q  448 agt 450  Q
    |||    
T  33787056 agt 33787054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 248 - 444
Target Start/End: Original strand, 20194438 - 20194634
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  20194438 ctcagcaggatataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggtttaa 20194537  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
           || |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  20194538 aaaaacaca-aaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaagatatatcatatttcacaca 20194634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 33772304 - 33772097
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaa-gatcacatcacagccactggatcaaagat--ccaagggtc 344  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||||| | ||||| ||| |||||||||||| | |||||||||   | |||||||    
T  33772304 ctcagcaggatttaatctggaccgtttgatgaatccagaggtccagatctagcccccaacgattacatcacagccattagatcaaagaatacaaagggtc 33772205  T
Q  345 cnnnnnnn--ggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccaca 442  Q
    |         | ||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  33772204 cagaaaaaaagacaccaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccaca 33772105  T
Q  443 caaaaagt 450  Q
    ||||||||    
T  33772104 caaaaagt 33772097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 26176264 - 26176167
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||  |||||||| ||| ||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||||    
T  26176264 ggctcagcaggaactaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccattggatcaaagatccaagggt 26176167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 23026607 - 23026700
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| | || ||||||| |||||||||||  ||||| |||||||||    
T  23026607 ggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctgaatctcaagatctcatcacagccataggatctaagatccaa 23026700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 23636531 - 23636438
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||   |||||||||| |||||||||||  ||||| |||||||||    
T  23636531 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgtatcccaagatctcatcacagccataggatctaagatccaa 23636438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 23836360 - 23836453
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||   |||||||||| |||||||||||  ||||| |||||||||    
T  23836360 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgtatcccaagatctcatcacagccataggatctaagatccaa 23836453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 23983990 - 23983897
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  23983990 ggctcagcaggatcaaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 23983897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 25194726 - 25194640
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||  | ||||||| ||||||||||| | |||||||    
T  25194726 ggctcagcagaatttaatctggaccgttggatgaatccagaggtccagatctaaacctcaagatctcatcacagccattagatcaaa 25194640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 25210150 - 25210064
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||  | ||||||| ||||||||||| | |||||||    
T  25210150 ggctcagcagaatttaatctggaccgttggatgaatccagaggtccagatctaaacctcaagatctcatcacagccattagatcaaa 25210064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 332
Target Start/End: Complemental strand, 25274307 - 25274221
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||||||||||||  | ||||||| ||||||||||| | |||||||    
T  25274307 ggctcagcagaatttaatctggaccgttggatgaatccagaggtccagatctaaacctcaagatctcatcacagccattagatcaaa 25274221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 21851632 - 21851725
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||   ||||||| ||| || |||||||||||||||||||||||| | |||||||| |||||||| ||||||||||| |||||||    
T  21851632 ggctcagcaggacacaatctggaccgttgaatgaatccagaggtccagatctaaattccaagatctcatcacagacactggatcaacgatccaa 21851725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 251 - 332
Target Start/End: Original strand, 35872204 - 35872285
Alignment:
Q  251 agcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    |||||| |||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| ||||||||||| | |||||||    
T  35872204 agcagggtttaatctggaccgttggatgaatccagaggtccagatttaaacctcaagatctcatcacagccattagatcaaa 35872285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 31549247 - 31549340
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||| | ||||| | ||||| ||| ||||| ||||||||||||||||||| | |||||||||| ||||||| |||  ||||| |||||||||    
T  31549247 ggctcaacgggattaattctggaccgttggattaatccagaggtccagatctgaatcccaagatctcatcacaaccataggatctaagatccaa 31549340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 18083188 - 18083104
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||| |||  | || |||| ||||||| ||| | |||||||    
T  18083188 ctcagcagggtttaatctggaccgttggatgaatccagaggtccagatttaaacctcacgatctcatcacaaccattagatcaaa 18083104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 23431348 - 23431382
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  23431348 gatagggaaatatttttagaaattttttagaagca 23431382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 12171374 - 12171418
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  12171374 aagcacagcgaccgtcagatcaacgatctgacggttcaaacagaa 12171418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 12180803 - 12180847
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  12180803 aagcacagcgaccgtcagatcaacgatctgacggttcaaacagaa 12180847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 13440408 - 13440205
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13440408 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 13440309  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13440308 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 13440209  T
Q  445 aaaa 448  Q
    ||||    
T  13440208 aaaa 13440205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 30277649 - 30277446
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30277649 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 30277550  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30277549 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 30277450  T
Q  445 aaaa 448  Q
    ||||    
T  30277449 aaaa 30277446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 20308179 - 20307974
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20308179 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 20308080  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  20308079 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacaca 20307980  T
Q  445 aaaagt 450  Q
    ||||||    
T  20307979 aaaagt 20307974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 24582709 - 24582915
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24582709 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 24582808  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  24582809 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatacaccatattccacac 24582908  T
Q  444 aaaaagt 450  Q
    |||||||    
T  24582909 aaaaagt 24582915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 24597537 - 24597743
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24597537 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 24597636  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  24597637 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatacaccatattccacac 24597736  T
Q  444 aaaaagt 450  Q
    |||||||    
T  24597737 aaaaagt 24597743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 245 - 423
Target Start/End: Complemental strand, 17008793 - 17008616
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17008793 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 17008694  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacaga 423  Q
    |       |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  17008693 c-aaaaaaggcacaaaagatagtgtaaaatgcaggaagtacagtgaccgttagatcaaagatctaacggttcaaacaga 17008616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 245 - 423
Target Start/End: Complemental strand, 17022757 - 17022580
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  17022757 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccgctggatcaaagatccaagggtc 17022658  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacaga 423  Q
    |       |||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  17022657 c-aaaaaaggcacaaaagatagtgtaaaatgcaggaagtacagtgaccgttagatcaaagatctaacggttcaaacaga 17022580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 245 - 423
Target Start/End: Original strand, 5404841 - 5405020
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5404841 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaagggtc 5404940  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacaga 423  Q
    |        |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5404941 caaaaaaaagcacaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacaga 5405020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 11927042 - 11926840
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||| | ||||||||||| ||||||||      
T  11927042 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 11926943  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  11926942 aaaaaagcataaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccaaattccacacaaaa 11926843  T
Q  448 agt 450  Q
    |||    
T  11926842 agt 11926840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Original strand, 24810160 - 24810362
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| |   ||||||||||||||||||||| ||||||||||| ||||||||      
T  24810160 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagccttcaagatcacatcacagccacttgatcaaagatcaaagggtccag 24810259  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  24810260 aaaaaagcataaaagatagtgtaaattgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 24810359  T
Q  448 agt 450  Q
    |||    
T  24810360 agt 24810362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 250 - 444
Target Start/End: Original strand, 5200713 - 5200908
Alignment:
Q  250 cagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnnnn 349  Q
    ||||||| | |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||          
T  5200713 cagcaggttataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggttaaaaa 5200812  T
Q  350 nnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
            |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  5200813 aaacaacaaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacacaagatataccatatttcacaca 5200908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 40562320 - 40562226
Alignment:
Q  249 tcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  40562320 tcagcaggatataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggt 40562226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 18009318 - 18009221
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  18009318 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccactggatccaagatccaagggt 18009221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 19646014 - 19646107
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  19646014 ggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 19646107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 19773794 - 19773701
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  19773794 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 19773701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 25248258 - 25248351
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  25248258 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatcttaatcccaagatctcatcacagccataggatctaagatccaa 25248351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 247 - 339
Target Start/End: Complemental strand, 34841972 - 34841880
Alignment:
Q  247 gctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  34841972 gctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 34841880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 14719649 - 14719742
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| |||| | |||||||||| |||||||||||  ||||| || ||||||    
T  14719649 ggctcagcaggatttaatctgggccgttggatgaatccagaggtccaaatctgaatcccaagatctcatcacagccataggatctaaaatccaa 14719742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 14737891 - 14737984
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| |||| | |||||||||| |||||||||||  ||||| || ||||||    
T  14737891 ggctcagcaggatttaatctgggccgttggatgaatccagaggtccaaatctgaatcccaagatctcatcacagccataggatctaaaatccaa 14737984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 24923787 - 24923694
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  |||| ||  || ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||||    
T  24923787 ggctcagcaggatacaatccggatcgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccacaggatctaagatccaa 24923694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 55587080 - 55587173
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||| |||  ||||||| ||| |||||||||||| |||||||||||||| |||||||||| |||||||||||| ||||| |||||||||    
T  55587080 ggctcagcatgatacaatctggaccgttggatgaatccaaaggtccagatctaaatcccaagatctcatcacagccacaggatctaagatccaa 55587173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 26211520 - 26211613
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||||| ||| ||||||||||   ||||| |||||||||    
T  26211520 ggctcagcaggatcaaatctgggccgttggatgaatccagaggtccagatctgaatcccaaaatctcatcacagccctaggatctaagatccaa 26211613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 26220279 - 26220372
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||||| ||| ||||||||||   ||||| |||||||||    
T  26220279 ggctcagcaggatcaaatctgggccgttggatgaatccagaggtccagatctgaatcccaaaatctcatcacagccctaggatctaagatccaa 26220372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 273 - 339
Target Start/End: Complemental strand, 17142344 - 17142278
Alignment:
Q  273 tggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||||||||   |||||||| ||||| |||||| ||||| |||||||||    
T  17142344 tggatgaatccagaggtccagatctaaactccaagatcccatcatagccacaggatctaagatccaa 17142278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 343
Target Start/End: Original strand, 12426343 - 12426374
Alignment:
Q  312 catcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||||||||||||||||||||||    
T  12426343 catcacagccactggatcaaagatccaagggt 12426374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 14719784 - 14719828
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  14719784 aagcacagcgaccgtcagatcaacgatctgacggttcaaacagaa 14719828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 14738026 - 14738070
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  14738026 aagcacagcgaccgtcagatcaacgatctgacggttcaaacagaa 14738070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 424
Target Start/End: Complemental strand, 24923657 - 24923609
Alignment:
Q  376 caggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    |||| ||||||  |||||| ||||||||||||| |||||||||||||||    
T  24923657 caggcagcacagtgaccgtcagatcaaagatctgacggttcaaacagaa 24923609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 12650319 - 12650116
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12650319 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 12650220  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12650219 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 12650120  T
Q  445 aaaa 448  Q
    ||||    
T  12650119 aaaa 12650116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 12665241 - 12665038
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12665241 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 12665142  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12665141 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 12665042  T
Q  445 aaaa 448  Q
    ||||    
T  12665041 aaaa 12665038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 23120786 - 23120580
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23120786 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 23120687  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23120686 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacac 23120587  T
Q  444 aaaaagt 450  Q
    |||||||    
T  23120586 aaaaagt 23120580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 5392595 - 5392799
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  5392595 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatctcatcacagccattggatcaaagatccaagggtc 5392694  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5392695 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacac 5392794  T
Q  444 aaaaa 448  Q
    |||||    
T  5392795 aaaaa 5392799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 245 - 447
Target Start/End: Complemental strand, 33844439 - 33844237
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  33844439 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctatctcccaagattacatcacagccactggatcaaagatccaagggtc 33844340  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |         ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||  | |||| |||||||    
T  33844339 caaaaaaa-acacaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaatatgcatcatactccacac 33844241  T
Q  444 aaaa 447  Q
    ||||    
T  33844240 aaaa 33844237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 248 - 444
Target Start/End: Complemental strand, 24044609 - 24044412
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  24044609 ctcagcaggttataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggt-tta 24044511  T
Q  348 nnnnnggcac-aaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
           ||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||    
T  24044510 aaaaaaacacaaaaagatagtgtaaaattacaggaagcacaatgaccgttagatcaaagatctaacggttcaaacaaaagatataccatatttcacaca 24044412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 248 - 447
Target Start/End: Complemental strand, 34856544 - 34856344
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||| | ||||||||||| ||||||||      
T  34856544 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 34856445  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaa 446  Q
          ||| |||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||  | |||| ||||||||||    
T  34856444 aaaaaagcataaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaacaatctaacggttcaaacagaatatgcaacatactccacacaaa 34856345  T
Q  447 a 447  Q
    |    
T  34856344 a 34856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 248 - 447
Target Start/End: Complemental strand, 34871606 - 34871406
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||| | ||||||||||| ||||||||      
T  34871606 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 34871507  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaa 446  Q
          ||| |||||||||||||||| |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||  | |||| ||||||||||    
T  34871506 aaaaaagcataaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaacaatctaacggttcaaacagaatatgcaacatactccacacaaa 34871407  T
Q  447 a 447  Q
    |    
T  34871406 a 34871406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 246 - 344
Target Start/End: Complemental strand, 42244695 - 42244596
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggat-caaagatccaagggtc 344  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||| ||| ||||||||||||    
T  42244695 ggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccattggatccaacgatccaagggtc 42244596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 16273893 - 16273796
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||| | ||||| ||  ||||||||||||||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||    
T  16273893 ggctcagcaggattaattctggaccattggatgaatccagaggtccagatctgaatcccaaaatctcatcacagccattggatcaaagatccaagggt 16273796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 16283052 - 16282955
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||| | ||||| ||  ||||||||||||||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||    
T  16283052 ggctcagcaggattaattctggaccattggatgaatccagaggtccagatctgaatcccaaaatctcatcacagccattggatcaaagatccaagggt 16282955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 22186417 - 22186324
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||  ||||| |||||||||    
T  22186417 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccataggatctaagatccaa 22186324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 27682067 - 27682160
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||| || |||||||| ||| ||||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||| |||||||    
T  27682067 ggctcagcagaatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccattggatcaacgatccaa 27682160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 31355862 - 31355955
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  31355862 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 31355955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 34684806 - 34684713
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  34684806 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 34684713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 25262931 - 25262839
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatcca 338  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||| | || ||||||| ||||||||| ||||||||||| |||||    
T  25262931 ggctcagcaggatttaatctagaccgttggatgaatccagaggtccagatctgaatctcaagatctcatcacagctactggatcaaaaatcca 25262839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 21150520 - 21150427
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||| ||||| |||||||||||| ||||| |||||||||    
T  21150520 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctgaatccctagatctcatcacagccacaggatctaagatccaa 21150427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 339
Target Start/End: Complemental strand, 28480429 - 28480340
Alignment:
Q  250 cagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||  ||||||| ||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||  |||| |||||||||    
T  28480429 cagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctgatcacagccacatgatctaagatccaa 28480340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 26266505 - 26266575
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcaca 318  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| |||||||    
T  26266505 ctcagcagggtttaatctggaccgttggatgaatccagaggtccagatttaaacctcaagatctcatcaca 26266575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 23120883 - 23120849
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  23120883 gatagggaaatatttttagaaattttttagaagca 23120849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 3756176 - 3756220
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  3756176 aagcacaacgaccgtcagatcaacgatctgacggttcaaacagaa 3756220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 3766228 - 3766272
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||    
T  3766228 aagcacaacgaccgtcagatcaacgatctgacggttcaaacagaa 3766272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 163; Significance: 7e-87; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 20322185 - 20322388
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20322185 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccaccggatcaaagatccaagggtc 20322284  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |       ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  20322285 caaaaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcagacagaagatatagcatatttcacaca 20322384  T
Q  445 aaaa 448  Q
    ||||    
T  20322385 aaaa 20322388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 28149481 - 28149279
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||| ||||||||      
T  28149481 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagccctcaagatcacatcacagccacttgatcaaagatcaaagggtccag 28149382  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  28149381 aaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 28149282  T
Q  448 agt 450  Q
    |||    
T  28149281 agt 28149279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 28159955 - 28159753
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||| ||||||||      
T  28159955 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagccctcaagatcacatcacagccacttgatcaaagatcaaagggtccag 28159856  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  28159855 aaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 28159756  T
Q  448 agt 450  Q
    |||    
T  28159755 agt 28159753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 16134383 - 16134286
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||||    
T  16134383 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccattggatcaaagatccaagggt 16134286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 343
Target Start/End: Original strand, 3351694 - 3351792
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||| | |||||||||  ||||||||||| ||||||||||||||||||||    
T  3351694 aggctcagcaggaactaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatttcatcacagccattggatcaaagatccaagggt 3351792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 245 - 343
Target Start/End: Complemental strand, 20501348 - 20501250
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||| |||||||||||||    
T  20501348 aggctcagcaggatcaaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccacaggatctaagatccaagggt 20501250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 246 - 329
Target Start/End: Complemental strand, 18701784 - 18701701
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatc 329  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  18701784 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccactggatc 18701701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 34337714 - 34337807
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  34337714 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 34337807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 22478892 - 22478799
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| ||||||||||   ||||| |||||||||    
T  22478892 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagcccaaggatccaagatccaa 22478799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 22471841 - 22471748
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||| | | || ||||||| |||||||||||  ||||| |||||||||    
T  22471841 ggctcagcaggatttaatgtggaccgttggatgaatccagaggtccagatttgaatctcaagatctcatcacagccataggatctaagatccaa 22471748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 5136960 - 5136882
Alignment:
Q  254 aggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||  | ||||||| ||||||||||| | |||||||    
T  5136960 aggatttaatctggaccgttggatgaatccagaggtccagatctaaacctcaagatctcatcacagccattagatcaaa 5136882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 24653784 - 24653714
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcaca 318  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| |||||||    
T  24653784 ctcagcaagatttaatctggaccgttggatgaatccagaggtccagatttaatcctcaagatctcatcaca 24653714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 26797417 - 26797347
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcaca 318  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| |||||||    
T  26797417 ctcagcaagatttaatctggaccgttggatgaatccagaggtccagatttaatcctcaagatctcatcaca 26797347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 161; Significance: 1e-85; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 5123011 - 5122806
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5123011 aggctcagcaggatttaatctggtccgctggacgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 5122912  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  5122911 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggtttaaacagaagatataccatattccacaca 5122812  T
Q  445 aaaagt 450  Q
    ||||||    
T  5122811 aaaagt 5122806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 30307682 - 30307476
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30307682 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 30307583  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30307582 caaaaaagagcacaaaagatagtgtaaaattgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacac 30307483  T
Q  444 aaaaagt 450  Q
    |||||||    
T  30307482 aaaaagt 30307476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 5157964 - 5157759
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5157964 aggctcagcaggatttaatctggtccgctggacgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 5157865  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |         ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||    
T  5157864 caaaaaaaaacacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggtttaaacaaaagatataccatattccacaca 5157765  T
Q  445 aaaagt 450  Q
    ||||||    
T  5157764 aaaagt 5157759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 245 - 449
Target Start/End: Original strand, 26750528 - 26750733
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26750528 aggctcagcaggacttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaagggtc 26750627  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26750628 cagaaaaaagcacaaaagatagtgtaaaattgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacac 26750727  T
Q  444 aaaaag 449  Q
    ||||||    
T  26750728 aaaaag 26750733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 45730563 - 45730361
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| | |  |||||||||||||||||||| ||||||||||| ||||||||      
T  45730563 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagcccttaagatcacatcacagccacttgatcaaagatcaaagggtccag 45730464  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  45730463 aaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 45730364  T
Q  448 agt 450  Q
    |||    
T  45730363 agt 45730361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 45741465 - 45741263
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| | |  |||||||||||||||||||| ||||||||||| ||||||||      
T  45741465 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagcccttaagatcacatcacagccacttgatcaaagatcaaagggtccag 45741366  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  45741365 aaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 45741266  T
Q  448 agt 450  Q
    |||    
T  45741265 agt 45741263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 245 - 447
Target Start/End: Original strand, 11415184 - 11415387
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11415184 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaagggtc 11415283  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||||  | |||| |||||||    
T  11415284 caaaaaaaagcacaaaagatagtgtaaaattgcaggaagcgcagtgaccgttagatcaaagatctaacggttcaaacagaagatgcaacatactccacac 11415383  T
Q  444 aaaa 447  Q
    ||||    
T  11415384 aaaa 11415387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 245 - 447
Target Start/End: Original strand, 11430168 - 11430371
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  11430168 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaatggtc 11430267  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||||  | |||| |||||||    
T  11430268 caaaaaaaagcacaaaagatagtgtaaaattgcaggaagcgcagtgaccgttagatcaaagatctaacggttcaaacagaagatgcaacatactccacac 11430367  T
Q  444 aaaa 447  Q
    ||||    
T  11430368 aaaa 11430371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Original strand, 7232250 - 7232452
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||| ||||||||||||||| | ||||||||||| ||||||||      
T  7232250 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaaaatcacatcacagccatttgatcaaagatcaaagggtccag 7232349  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  7232350 aaaaaagcataaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccaaattccacacaaaa 7232449  T
Q  448 agt 450  Q
    |||    
T  7232450 agt 7232452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Original strand, 26504923 - 26505125
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||| ||||||||||||||| | ||||||||||| ||||||||      
T  26504923 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaaaatcacatcacagccatttgatcaaagatcaaagggtccag 26505022  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  26505023 aaaaaagcataaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccaaattccacacaaaa 26505122  T
Q  448 agt 450  Q
    |||    
T  26505123 agt 26505125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Original strand, 39202190 - 39202392
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||| ||||||||||||| ||||||||||| ||||||||      
T  39202190 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcgcatcacagccacttgatcaaagatcaaagggtccag 39202289  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  39202290 aaaaaagcataaaagatagtgtaaattgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccaaattccacacaaaa 39202389  T
Q  448 agt 450  Q
    |||    
T  39202390 agt 39202392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Original strand, 39213561 - 39213763
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||| ||||||||||||| ||||||||||| ||||||||      
T  39213561 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcgcatcacagccacttgatcaaagatcaaagggtccag 39213660  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  39213661 aaaaaagcataaaagatagtgtaaattgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccaaattccacacaaaa 39213760  T
Q  448 agt 450  Q
    |||    
T  39213761 agt 39213763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 248 - 444
Target Start/End: Original strand, 15354127 - 15354323
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  15354127 ctcagcaggatataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggtttaa 15354226  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
           || |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  15354227 aaaaacaca-aaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacaca 15354323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 245 - 401
Target Start/End: Complemental strand, 20592032 - 20591875
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20592032 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 20591933  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatca 401  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||    
T  20591932 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatca 20591875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 248 - 444
Target Start/End: Complemental strand, 5245563 - 5245366
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  5245563 ctcagcaggttataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggtttaa 5245464  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
           || |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||| ||||||    
T  5245463 aaaaacacaaaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaagatataccacatttcacaca 5245366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 248 - 398
Target Start/End: Original strand, 26496609 - 26496759
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||| ||||||||||||||| | ||||||||||| || |||||      
T  26496609 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaaaatcacatcacagccatttgatcaaagatcaaacggtccag 26496708  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttaga 398  Q
          ||| |||||||||||||||||||||||||||||  ||||||||||    
T  26496709 aaaaaagcataaaagatagtgtaaaatgcaggaagcacagtgaccgttaga 26496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 16243882 - 16243785
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||| |||||||||||||||||||    
T  16243882 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccacaggatcaaagatccaagggt 16243785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 16227004 - 16226907
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| ||||  |||||| |||||||||||||||||||    
T  16227004 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcctagccacaggatcaaagatccaagggt 16226907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 16544675 - 16544578
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||| |||||||| ||| | ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||| |||||||||||    
T  16544675 ggctcagcaggatctaatctggaccgttagatgaatccagaggtccagatctgaatcccaagatctcatcacagccattggatcaacgatccaagggt 16544578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 16620987 - 16621084
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||| |||||||| ||| | ||||||||||||||||||||||| | |||||||||| ||||||||||| |||||||| |||||||||||    
T  16620987 ggctcagcaggatctaatctggaccgttagatgaatccagaggtccagatctgaatcccaagatctcatcacagccattggatcaacgatccaagggt 16621084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 374 - 450
Target Start/End: Complemental strand, 15603022 - 15602946
Alignment:
Q  374 tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaaagt 450  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  15603022 tgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaaagt 15602946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 16121635 - 16121728
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  16121635 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 16121728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 16148374 - 16148467
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  16148374 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 16148467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 29022627 - 29022534
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| |||| | |||||||||| |||||||||||  ||||| |||||||||    
T  29022627 ggctcagcaggatttaatctggaccgttggatgaatccagaggtccaaatctgaatcccaagatctcatcacagccataggatctaagatccaa 29022534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 29031065 - 29030972
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| |||| | |||||||||| |||||||||||  ||||| |||||||||    
T  29031065 ggctcagcaggatttaatctggaccgttggatgaatccagaggtccaaatctgaatcccaagatctcatcacagccataggatctaagatccaa 29030972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 29081188 - 29081091
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||||| ||| ||||| ||||| ||||||||||||||||||||    
T  29081188 ggctcagcaggatcaaatctgggccgttggatgaatccagaggtccagatctgaatcccaaaatctcatcatagccattggatcaaagatccaagggt 29081091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 29095947 - 29095850
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||| | |||||| ||| ||||| ||||| ||||||||||||||||||||    
T  29095947 ggctcagcaggatcaaatctgggccgttggatgaatccagaggtccagatctgaatcccaaaatctcatcatagccattggatcaaagatccaagggt 29095850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 44076157 - 44076254
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||| | ||||| ||  ||||||||||||||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||    
T  44076157 ggctcagcaggattaattctggaccattggatgaatccagaggtccagatctgaatcccaaaatctcatcacagccattggatcaaagatccaagggt 44076254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 17210524 - 17210431
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||| ||  ||||| |||||||||    
T  17210524 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagtcataggatctaagatccaa 17210431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 27434447 - 27434354
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| | |||||||||  ||||| |||||||||    
T  27434447 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcctcacagccataggatctaagatccaa 27434354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 27443477 - 27443384
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| | |||||||||  ||||| |||||||||    
T  27443477 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcctcacagccataggatctaagatccaa 27443384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 16910825 - 16910923
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa-gatccaagggt 343  Q
    |||||||||||||  ||| ||| ||| ||||||||||||||||||||||||||| ||| |||||| |||||| |||||| ||||||| |||||||||||    
T  16910825 ggctcagcaggatacaatatggaccgttggatgaatccagaggtccagatctaaatcctaagatctcatcaccgccactagatcaaatgatccaagggt 16910923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 27966910 - 27967003
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||| | ||||| ||  ||||| | ||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  27966910 ggctcagcaggattaattctggaccattggattagtccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 27967003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 27976363 - 27976456
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||| | ||||| ||  ||||| | ||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  27976363 ggctcagcaggattaattctggaccattggattagtccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 27976456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 35971237 - 35971153
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| ||||||| ||| | |||||||    
T  35971237 ctcagcagggtttaatctggaccgttggatgaatccagaggtccagatttaaacctcaagatctcatcacaaccattagatcaaa 35971153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 35992649 - 35992565
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| ||||||| ||| | |||||||    
T  35992649 ctcagcagggtttaatctggaccgttggatgaatccagaggtccagatttaaacctcaagatctcatcacaaccattagatcaaa 35992565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Original strand, 14930671 - 14930741
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcaca 318  Q
    ||||||| |||||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| |||||||    
T  14930671 ctcagcaagatttaatctggaccgttggatgaatccagaggtccagatttaatcctcaagatctcatcaca 14930741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 11415088 - 11415122
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  11415088 gatagggaaatatttttagaaattttttagaagca 11415122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 11430072 - 11430106
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  11430072 gatagggaaatatttttagaaattttttagaagca 11430106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 30307778 - 30307744
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  30307778 gatagggaaatatttttagaaattttttagaagca 30307744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 10441381 - 10441313
Alignment:
Q  376 caggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |||||| ||||  |||||| ||||||| ||||| ||||||||||||||| ||| | |||||| ||||||    
T  10441381 caggaaacacagtgaccgtcagatcaacgatctgacggttcaaacagaaaataaaccatatttcacaca 10441313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 29022492 - 29022448
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  29022492 aagcacagcgaccgtcagatcaacgatctgacggttcaaacagaa 29022448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 29030930 - 29030886
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  29030930 aagcacagcgaccgtcagatcaacgatctgacggttcaaacagaa 29030886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 160; Significance: 4e-85; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 52472 - 52676
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52472 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 52571  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  52572 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacac 52671  T
Q  444 aaaaa 448  Q
    |||||    
T  52672 aaaaa 52676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 4e-85; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 9529738 - 9529534
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9529738 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 9529639  T
Q  345 c-nnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |         |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9529638 caaaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacactgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacac 9529539  T
Q  444 aaaaa 448  Q
    |||||    
T  9529538 aaaaa 9529534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 245 - 448
Target Start/End: Original strand, 8227545 - 8227748
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8227545 aggctcagcaggatttaatctggtccgctggatgaaaccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatcaaagggtc 8227644  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8227645 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatattccacaca 8227744  T
Q  445 aaaa 448  Q
    ||||    
T  8227745 aaaa 8227748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 18002340 - 18002137
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18002340 aggctcagcaggatttaatctggtccgctggatgaatccaggggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 18002241  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  18002240 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataacatatttcacaca 18002141  T
Q  445 aaaa 448  Q
    ||||    
T  18002140 aaaa 18002137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 246 - 448
Target Start/End: Complemental strand, 10600003 - 10599800
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtcc 345  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10600003 ggctcagcaggatttaatcttgtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtcc 10599904  T
Q  346 nnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
            |||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10599903 aaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacaca 10599804  T
Q  445 aaaa 448  Q
    ||||    
T  10599803 aaaa 10599800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 245 - 444
Target Start/End: Complemental strand, 8345729 - 8345529
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8345729 aggctcagcaggatttaatctggaccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 8345630  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |||||    
T  8345629 caaaaaaaagcacaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaacgatctaacggttcaaacagaagatataccatatttcacac 8345530  T
Q  444 a 444  Q
    |    
T  8345529 a 8345529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 245 - 444
Target Start/End: Complemental strand, 10413413 - 10413215
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10413413 aggctcagcaggatttaatctggaccgctggatgaatccagaggttcagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 10413314  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  10413313 caaaaaaa-gcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacaca 10413215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 14452471 - 14452677
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  14452471 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccatatctaactctcaagatcacatcacagccactggatcaaagatccaagggtc 14452570  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  14452571 caaaaaagagcacaaaagatagtgtaaaattgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacac 14452670  T
Q  444 aaaaagt 450  Q
    |||||||    
T  14452671 aaaaagt 14452677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 4622985 - 4622783
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||| ||||||||      
T  4622985 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagccctcaagatcacatcacagccacttgatcaaagatcaaagggtccag 4622886  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  4622885 aaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 4622786  T
Q  448 agt 450  Q
    |||    
T  4622785 agt 4622783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 4633967 - 4633765
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||| ||||||||      
T  4633967 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagccctcaagatcacatcacagccacttgatcaaagatcaaagggtccag 4633868  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
         ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  4633867 aaaaaggcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacacaaaa 4633768  T
Q  448 agt 450  Q
    |||    
T  4633767 agt 4633765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 248 - 444
Target Start/End: Complemental strand, 18045984 - 18045787
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||      
T  18045984 ctcagcaggatataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggtccaa 18045885  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
          |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  18045884 aaaaaagcacaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacaca 18045787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 248 - 444
Target Start/End: Complemental strand, 18062048 - 18061851
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||      
T  18062048 ctcagcaggatataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggtccaa 18061949  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
          |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  18061948 aaaaaagcacaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacaca 18061851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 4448959 - 4448757
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||| ||||||||      
T  4448959 ctcagcaggatttaatctggaccgtgggatgaatccagaggtccagatctaacccccaagattacatcacagccattagatcaaagatcaaagggtccag 4448860  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          |||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  4448859 aaaaaagcaccaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaatagaagatataccatattccacacaaaa 4448760  T
Q  448 agt 450  Q
    |||    
T  4448759 agt 4448757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 245 - 447
Target Start/End: Complemental strand, 8581353 - 8581151
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  8581353 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaacgatccaagggtc 8581254  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||  | |||| |||||||    
T  8581253 caaaaaaa-gcacaaaatatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaatatgcaacatactccacac 8581155  T
Q  444 aaaa 447  Q
    ||||    
T  8581154 aaaa 8581151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 28012343 - 28012141
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||||||| | |||||||| |||||||||||| | ||||||||||| |||||||       
T  28012343 ctcagcaggatttaatctggaccgtgggatgaatccagaggtccagatctagcccccaagattacatcacagccattagatcaaagatcaaagggtctag 28012244  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28012243 aaaaaagcaccaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacacaaaa 28012144  T
Q  448 agt 450  Q
    |||    
T  28012143 agt 28012141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 248 - 444
Target Start/End: Original strand, 34801971 - 34802168
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  34801971 ctcagcaggatataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggt-tta 34802069  T
Q  348 nnnnnggcac-aaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
           ||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  34802070 aaaaaaacacaaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacaca 34802168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 248 - 444
Target Start/End: Complemental strand, 4683727 - 4683531
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  4683727 ctcagcaggttataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggt-tta 4683629  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
           || |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  4683628 aaaaacacaaaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaagatataacatatttcacaca 4683531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 248 - 444
Target Start/End: Complemental strand, 4693816 - 4693620
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||||| | |||||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  4693816 ctcagcaggttataatctggaccgttggatgaatccagaggtccagatctaactcccaagatctcatcacagccactggatcaaagatccaagggt-tta 4693718  T
Q  348 nnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
           || |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  4693717 aaaaacacaaaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaagatataccatatttcacaca 4693620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 245 - 423
Target Start/End: Complemental strand, 4888193 - 4888013
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||||||    
T  4888193 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctaactcccaaaatctcatcacagccattggatcaaagatccaagggtc 4888094  T
Q  345 c--nnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacaga 423  Q
    |          ||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  4888093 caaaaaaaaaagcacaaaagatagtgtaaaatgcaggaagtacagtgaccgttagatcaaagatctaacggttcaaacaga 4888013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 245 - 423
Target Start/End: Complemental strand, 20053676 - 20053498
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||    
T  20053676 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccatttgatcaaagatcaaagggtc 20053577  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacaga 423  Q
              || |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  20053576 tagaaaaaaacataaaagatagtgtaaaatgcaggaaacacagtgaccgttagatcaaagatctaacggttcaaacaga 20053498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 245 - 423
Target Start/End: Complemental strand, 20076336 - 20076158
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| |||||||    
T  20076336 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccatttgatcaaagatcaaagggtc 20076237  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacaga 423  Q
              || |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  20076236 tagaaaaaaacataaaagatagtgtaaaatgcaggaaacacagtgaccgttagatcaaagatctaacggttcaaacaga 20076158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 28359139 - 28358944
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||||||||| | ||||| || |||||||||||| | ||||||||       |||||      
T  28359139 ctcagcatgatttaatctggaccgttggatgaatccagaggtccagatctagcccccaatattacatcacagccattagatcaaag-------ggtccag 28359047  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28359046 aaaaaagcaccaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccatattccacacaaaa 28358947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 248 - 419
Target Start/End: Complemental strand, 1776337 - 1776165
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatcta-actcccaagatcacatcacagccactggatcaaagatccaagggtccn 346  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||||  | |||||||| |||||||||||| | ||||||||||| ||||||||     
T  1776337 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagccccccaagattacatcacagccattagatcaaagatcaaagggtcca 1776238  T
Q  347 nnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaa 419  Q
           |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  1776237 gaaaaaagcaccaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaa 1776165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 248 - 423
Target Start/End: Original strand, 5517313 - 5517489
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| ||||||||||||| |||||||||| | ||| ||||||||||||||||||| | ||||||||||| ||||||||      
T  5517313 ctcagcaggatttaatctggaccgttggatgaatccaggggtccagatcaagctctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 5517412  T
Q  348 nnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacaga 423  Q
          ||| |||||||||||| ||||||||| || ||||  |||||||||||||||||||||||||||||||||||    
T  5517413 aaaaaagcataaaagatagtgtaaaaatgcagaaaacacagtgaccgttagatcaaagatctaacggttcaaacaga 5517489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 27978015 - 27977918
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  27978015 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccactggatccaagatccaagggt 27977918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 13274145 - 13274048
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| |||||||||||||    
T  13274145 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaatatctcatcacagccactggatccaagatccaagggt 13274048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 2216098 - 2216191
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||||    
T  2216098 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccacaggatctaagatccaa 2216191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 4504561 - 4504658
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||| | ||||| ||| ||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||    
T  4504561 ggctcagcaggattaattctggaccgttggattaatccagaggtccagatctaaatcccaagatctcatcacagccattggatcaacgatccaagggt 4504658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 10721855 - 10721952
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||| | ||||| ||  ||||||||||||||||||||||||| | |||||| ||| ||||||||||| ||||||||||||||||||||    
T  10721855 ggctcagcaggattaattctggaccattggatgaatccagaggtccagatctgaatcccaaaatctcatcacagccattggatcaaagatccaagggt 10721952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 17563839 - 17563932
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  17563839 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 17563932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 31277978 - 31277885
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||  |||||||||    
T  31277978 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccacaggatttaagatccaa 31277885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 1479302 - 1479209
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||| ||||||||| ||| |||||||||||||||||||| |||| | |||||||||| |||||||||||  ||||| |||||||||    
T  1479302 ggctcagcaggacttaatctggaccgttggatgaatccagaggtccaaatctgaatcccaagatctcatcacagccataggatctaagatccaa 1479209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 7064788 - 7064881
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||| |||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  7064788 ggctcaacaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 7064881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 7097633 - 7097726
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||| |||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  7097633 ggctcaacaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 7097726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 16290059 - 16289966
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||| | ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||| |||||||||    
T  16290059 ggctcagcaggatacaatctagaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccacaggatctaagatccaa 16289966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 246 - 344
Target Start/End: Original strand, 6294658 - 6294756
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    |||||||||||||| | ||||| ||  ||||| ||||||||||||||||||| | |||||||||| |||||||||||  ||||| ||||||||| ||||    
T  6294658 ggctcagcaggattaattctggaccattggattaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaacggtc 6294756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 11261836 - 11261928
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||| || ||||||| ||| |||||||||||||||||||||||||||   ||||| || ||||| |||||| ||||| |||||||||    
T  11261836 ggctcagcagggtt-aatctggaccgttggatgaatccagaggtccagatctaaactccaaggtcccatcatagccacaggatctaagatccaa 11261928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 8227450 - 8227484
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  8227450 gatagggaaatatttttagaaattttttagaagca 8227484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 8345825 - 8345791
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  8345825 gatagggaaatatttttagaaattttttagaagca 8345791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 9529832 - 9529798
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  9529832 gatagggaaatatttttagaaattttttagaagca 9529798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 10413508 - 10413474
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||||||||||||||||    
T  10413508 gatagggaaatatttttagaaattttttagaagca 10413474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 344
Target Start/End: Original strand, 27339881 - 27339913
Alignment:
Q  312 catcacagccactggatcaaagatccaagggtc 344  Q
    |||||||||||||||||||||||||||||||||    
T  27339881 catcacagccactggatcaaagatccaagggtc 27339913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 18040342 - 18040305
Alignment:
Q  306 agatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||| ||||||| ||||||||||||||||||    
T  18040342 agatcacatcatagccactagatcaaagatccaagggt 18040305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 10721990 - 10722034
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    |||||||| |||||| ||||||| ||||| |||||||||||||||    
T  10721990 aagcacaatgaccgtcagatcaacgatctgacggttcaaacagaa 10722034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Original strand, 24217257 - 24217301
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    |||||||| |||||| ||||||| ||||| |||||||||||||||    
T  24217257 aagcacaatgaccgtcagatcaacgatctgacggttcaaacagaa 24217301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 156; Significance: 1e-82; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 245 - 448
Target Start/End: Complemental strand, 11143 - 10939
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11143 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 11044  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  11043 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaatagaagatataccatattccacac 10944  T
Q  444 aaaaa 448  Q
    |||||    
T  10943 aaaaa 10939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 146; Significance: 1e-76; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 15778736 - 15778530
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15778736 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaagggtc 15778637  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccg-ttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  15778636 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgtttagatcaaagatctaacggttcaaacagaagatataccatatttcacac 15778537  T
Q  444 aaaaagt 450  Q
    |||||||    
T  15778536 aaaaagt 15778530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 245 - 450
Target Start/End: Complemental strand, 15768323 - 15768117
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15768323 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaagggtc 15768224  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccg-ttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        |||||||||||||||||||||||||||||||||  | ||| ||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  15768223 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtggccgtttagatcaaagatctaacggttcaaacagaagatataccatatttcacac 15768124  T
Q  444 aaaaagt 450  Q
    |||||||    
T  15768123 aaaaagt 15768117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 245 - 450
Target Start/End: Original strand, 14360294 - 14360500
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14360294 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 14360393  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacac 443  Q
    |        ||||||||||| |||||||| |||||||||||||  ||||||||||||   ||||||||||||||||||||||||||| ||||||||||||    
T  14360394 caaaaaagagcacaaaagatggtgtaaaattgcaggaagcacagtgaccgttagatctttgatctaacggttcaaacagaagatataccatattccacac 14360493  T
Q  444 aaaaagt 450  Q
    |||||||    
T  14360494 aaaaagt 14360500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 245 - 447
Target Start/End: Complemental strand, 21926155 - 21925951
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  21926155 aggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaagggtc 21926056  T
Q  345 c-nnnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccaca 442  Q
    |         |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||  | |||| ||||||    
T  21926055 caaaaaaaaagcacaaaagatagtgtaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacagaatatgcaacatactccaca 21925956  T
Q  443 caaaa 447  Q
    |||||    
T  21925955 caaaa 21925951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 3716976 - 3716774
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||| | ||||||||||| ||||||||      
T  3716976 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 3716877  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  3716876 aaaaaagcataaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccaaattccacacaaaa 3716777  T
Q  448 agt 450  Q
    |||    
T  3716776 agt 3716774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 247 - 447
Target Start/End: Complemental strand, 28262253 - 28262052
Alignment:
Q  247 gctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccn 346  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||     
T  28262253 gctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctagctcccaagatcacatcacagccactggatcaaagatccaatggtcct 28262154  T
Q  347 nnnnnnggcacaaaagatagtgtaaaa-tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaa 445  Q
           |||||||||||||||||||| |||||||||| ||  |||||||||||||||||||||||||||||||||||||||  | |||| |||||||||    
T  28262153 taaaaaagcacaaaagatagtgtaaaattgcaggaagcgcagtgaccgttagatcaaagatctaacggttcaaacagaagatgcaacatactccacacaa 28262054  T
Q  446 aa 447  Q
    ||    
T  28262053 aa 28262052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 248 - 450
Target Start/End: Complemental strand, 40699578 - 40699376
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||| ||||||||||||| ||||||||||| ||||||||      
T  40699578 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcgcatcacagccacttgatcaaagatcaaagggtccag 40699479  T
Q  348 nnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaa 447  Q
          ||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  40699478 aaaaaagcataaaagatagtgtaaattgcaggaagcacagtgaccgttagatcaaagatctaacggttcaaacagaagatataccaaattccacacaaaa 40699379  T
Q  448 agt 450  Q
    |||    
T  40699378 agt 40699376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 245 - 403
Target Start/End: Original strand, 31340342 - 31340501
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31340342 aggctcagcaggatttaatctggtccgctagatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 31340441  T
Q  345 cnnnnnnnggcacaaaagatagtgt-aaaatgcaggaagcacaacgaccgttagatcaaa 403  Q
    |        |||||||||||||||| |||||||||||||||||  |||||||||||||||    
T  31340442 caaaaaaaagcacaaaagatagtgtaaaaatgcaggaagcacagtgaccgttagatcaaa 31340501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 31208635 - 31208728
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  31208635 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccattggatcaaagatccaa 31208728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 16191551 - 16191648
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||  |||||||| ||| ||||||||||||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||||    
T  16191551 ggctcagcaggaactaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccattggatcaaagatccaagggt 16191648  T

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Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 25718217 - 25718124
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||| |||||||||    
T  25718217 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaagatctcatcacagccacaggatctaagatccaa 25718124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 23091979 - 23091886
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  23091979 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 23091886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 36253453 - 36253550
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||   |||||| ||| |||||||| | | |||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||    
T  36253453 ggctcagcaggatgcgatctggaccgttggatgaaccaaaaggtccagatctaaatcccaagatctcatcacagccgctggatcaaagatccaagggt 36253550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 6583770 - 6583863
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||| | ||  |||||| |||||||||||  ||||| |||||||||    
T  6583770 ggctcagcaggatttaatcttgaccgttggatgaatccagaggtccagatctgaatcttaagatctcatcacagccataggatctaagatccaa 6583863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 248 - 332
Target Start/End: Original strand, 12480786 - 12480870
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| ||||||| ||| | |||||||    
T  12480786 ctcagcagggtttaatctggaccgttggatgaatccagaggtccagatttaaacctcaagatctcatcacaaccattagatcaaa 12480870  T

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Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 450
Target Start/End: Original strand, 31340497 - 31340532
Alignment:
Q  415 tcaaacagaagatatagcatattccacacaaaaagt 450  Q
    |||||||||||||||| |||||||||||||||||||    
T  31340497 tcaaacagaagatataccatattccacacaaaaagt 31340532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 184
Target Start/End: Original strand, 14360198 - 14360232
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||| ||||||||||||||||||||||||    
T  14360198 gatagggaaacatttttagaaattttttagaagca 14360232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 184
Target Start/End: Complemental strand, 28262351 - 28262317
Alignment:
Q  150 gatagggaaatatttttagaaattttttagaagca 184  Q
    |||||||||||||||||||||| ||||||||||||    
T  28262351 gatagggaaatatttttagaaactttttagaagca 28262317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 17128572 - 17128535
Alignment:
Q  306 agatcacatcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  17128572 agatcacatcatagccattggatcaaagatccaagggt 17128535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 444
Target Start/End: Complemental strand, 17974841 - 17974773
Alignment:
Q  376 caggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaagatatagcatattccacaca 444  Q
    |||||| ||||  |||||| ||||||| ||||| ||||||||||||||| ||| | |||||| ||||||    
T  17974841 caggaaacacagtgaccgtcagatcaacgatctgacggttcaaacagaaaatacaccatatttcacaca 17974773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 376 - 424
Target Start/End: Original strand, 36253582 - 36253630
Alignment:
Q  376 caggaagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||| ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  36253582 cagaaagcacagcgaccgtcagatcaacgatctgacggttcaaacagaa 36253630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 128; Significance: 5e-66; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 245 - 413
Target Start/End: Complemental strand, 17595 - 17427
Alignment:
Q  245 aggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtc 344  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17595 aggctcagcaggatttaatctgttccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatcaaagggtc 17496  T
Q  345 cnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacgg 413  Q
    |        |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  17495 caaaaaaaagcacaaaagatagtgtaaaatgcaggaagcacagtgaccgttagatcaaagatctaacgg 17427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 17426 - 17375
Alignment:
Q  397 gatcaaagatctaacggttcaaacagaagatatagcatattccacacaaaaa 448  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17426 gatcaaagatctaacggttcaaacagaagatataacatattccacacaaaaa 17375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1848 (Bit Score: 101; Significance: 7e-50; HSPs: 1)
Name: scaffold1848
Description:

Target: scaffold1848; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 248 - 422
Target Start/End: Complemental strand, 978 - 802
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggtccnn 347  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||||||||||||||||| | ||||||||||| ||||||||      
T  978 ctcagcaggatttaatctggaccgttggatgaatccagaggtccagatcaagctctcaagatcacatcacagccatttgatcaaagatcaaagggtccag 879  T
Q  348 nnnnnggcacaaaagatagtgtaaaa--tgcaggaagcacaacgaccgttagatcaaagatctaacggttcaaacag 422  Q
          ||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  878 aaaaaagcataaaagatagtgtaaaaattgcaggaagcacaatgaccgttagatcaaagatctaacggttcaaacag 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0489 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0489
Description:

Target: scaffold0489; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 450
Target Start/End: Original strand, 2298 - 2430
Alignment:
Q  318 agccactggatcaaagatccaagggtccnnnnnnnggcacaaaagatagtgtaaaatgcaggaagcacaacgaccgttagatcaaagatctaacggttca 417  Q
    ||||||| ||||||||||| ||||||||        ||| ||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||    
T  2298 agccacttgatcaaagatcaaagggtccagaaaaaagcataaaagatagtgtaaattgcaggaagcacagtgaccgttagatcaaagatctaacggttca 2397  T
Q  418 aacagaagatatagcatattccacacaaaaagt 450  Q
    ||||||||||||| |||||| ||||||||||||    
T  2398 aacagaagatataccatatttcacacaaaaagt 2430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0871 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0871
Description:

Target: scaffold0871; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 1021 - 928
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||| |||||||||    
T  1021 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccacaggatctaagatccaa 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0703 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0703
Description:

Target: scaffold0703; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 246 - 336
Target Start/End: Original strand, 6507 - 6597
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatc 336  Q
    |||||||||||||||||||| | | | ||||||||||||||||||||||||| | || ||||||| |||||||||||||||||||||||||    
T  6507 ggctcagcaggatttaatctagacggttggatgaatccagaggtccagatctgaatctcaagatctcatcacagccactggatcaaagatc 6597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0853 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0853
Description:

Target: scaffold0853; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 4767 - 4674
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| || |||||||||||||||||||||| | |||||||||| |||||||||||| ||||| |||||||||    
T  4767 ggctcagcaggatctaatctggaccgttgaatgaatccagaggtccagatctgaatcccaagatctcatcacagccacaggatctaagatccaa 4674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 2045 - 2138
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||  ||||| ||| ||||||||||||  |||| |||||||||    
T  2045 ggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctaaaccccaatatctcatcacagccacatgatctaagatccaa 2138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0455 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0455
Description:

Target: scaffold0455; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 4713 - 4806
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  | ||| |||||||||    
T  4713 ggctcagcaggatttaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccatagaatctaagatccaa 4806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 31624 - 31531
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| |||||||||||||||||||| |||||| |||||||||| |||||||||||| ||||| |||||||||    
T  31624 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccatatctaaatcccaagatctcatcacagccacaggatctaagatccaa 31531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 62534 - 62441
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||  |||||||||    
T  62534 ggctcagcaggatctaatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccacaggatttaagatccaa 62441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1547 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold1547
Description:

Target: scaffold1547; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 829 - 736
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||| ||||   |||||||||| |||||||||||  ||||| |||||||||    
T  829 ggctcagcaggatttaatctggaccgttggatgaatccagaggtccaaatctgcatcccaagatctcatcacagccataggatctaagatccaa 736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1481 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold1481
Description:

Target: scaffold1481; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 246 - 343
Target Start/End: Complemental strand, 705 - 608
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaagggt 343  Q
    |||||||||||||| | ||||| ||  ||||||||||||||||||||||||| | |||||| ||| | ||||||||| ||||||||||||||||||||    
T  705 ggctcagcaggattaattctggaccattggatgaatccagaggtccagatctgaatcccaaaatctcgtcacagccattggatcaaagatccaagggt 608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1481; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 380 - 424
Target Start/End: Complemental strand, 571 - 527
Alignment:
Q  380 aagcacaacgaccgttagatcaaagatctaacggttcaaacagaa 424  Q
    ||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  571 aagcacagcgaccgtcagatcaacgatctgacggttcaaacagaa 527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 82639 - 82546
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||| |||||| |  ||||||||| |||||||||||  ||||| |||||||||    
T  82639 ggctcagcaggatctaatctggaccgttggatgaatccagaggtctagatctgaaccccaagatctcatcacagccataggatctaagatccaa 82546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 246 - 339
Target Start/End: Complemental strand, 37182 - 37089
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||||||| ||| ||| ||||||||||||||||||||||| | | || ||||||| |||||||||||  ||||| |||||||||    
T  37182 ggctcagcaggatttaatgtggaccgttggatgaatccagaggtccagatttgaatctcaagatctcatcacagccataggatctaagatccaa 37089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1380 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold1380
Description:

Target: scaffold1380; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 260 - 339
Target Start/End: Complemental strand, 1917 - 1838
Alignment:
Q  260 taatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||| ||| ||||||||||||||||||||||||| | |||||||||| |||||||||||  ||||| |||||||||    
T  1917 taatctggaccgttggatgaatccagaggtccagatctgaatcccaagatctcatcacagccataggatctaagatccaa 1838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 19113 - 19206
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||||||||||||  ||||||| ||| ||||||||||||||||||||||||||| |||||| ||| ||| | |||||  ||||| |||||||||    
T  19113 ggctcagcaggatacaatctggaccgttggatgaatccagaggtccagatctaaatcccaatatctcatgatagccataggatctaagatccaa 19206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 51883 - 51813
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcaca 318  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||| |||  | ||||||| |||||||    
T  51883 ctcagcagggtttaatctggaccgttggatgaatccagaggtccagatttaatcctcaagatctcatcaca 51813  T

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Target: scaffold0144 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 246 - 339
Target Start/End: Original strand, 1134 - 1227
Alignment:
Q  246 ggctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaagatccaa 339  Q
    |||| |||| ||| |||||||| ||| | ||||||||||| ||||||||||| | || ||||||  |||||||||||  ||||| |||||||||    
T  1134 ggcttagcaagatctaatctggaccgttagatgaatccaggggtccagatctgaatctcaagatttcatcacagccataggatctaagatccaa 1227  T

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Target: scaffold1376 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1376
Description:

Target: scaffold1376; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 1547 - 1463
Alignment:
Q  248 ctcagcaggatttaatctggtccgctggatgaatccagaggtccagatctaactcccaagatcacatcacagccactggatcaaa 332  Q
    ||||||| | |||||||||| ||| ||||||||||||||||||| ||| |||  | ||||||| ||||||| ||| | |||||||    
T  1547 ctcagcatggtttaatctggaccgttggatgaatccagaggtccggatttaaacctcaagatctcatcacaaccattagatcaaa 1463  T

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Target: scaffold0001 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 47648 - 47700
Alignment:
Q  272 ctggatgaatccagaggtccagatctaactcccaagatcacatcacagccact 324  Q
    ||||||||||| ||||||||| |||||| ||||||| || |||||||||||||    
T  47648 ctggatgaatctagaggtccaaatctaaatcccaaggtctcatcacagccact 47700  T

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Target: scaffold0431 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 343
Target Start/End: Complemental strand, 3632 - 3601
Alignment:
Q  312 catcacagccactggatcaaagatccaagggt 343  Q
    ||||||||||||||||||||||||||||||||    
T  3632 catcacagccactggatcaaagatccaagggt 3601  T

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