View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19182_high_12 (Length: 265)
Name: NF19182_high_12
Description: NF19182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19182_high_12 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 2836445 - 2836202
Alignment:
| Q |
1 |
cattagaactagccttgtttaataccataaaaaatctttacaggaaaagtttttactaattaattctagagattgtaatcattcatacaagtaaaagtgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2836445 |
cattagaactagccttgtttaataccataaaaaatctttacaggaaaagtttgtactaattaattctagagattgtaatcattcatacaagtaaaagtgt |
2836346 |
T |
|
| Q |
101 |
agggaacaaatgtttaaaattgttcaatcgcaaaggtcatatatgagaaactaattgaaccagttttaaacatttcagtttctcttctctgacctgtatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2836345 |
agggaacaaatgtttaaaattgttcaatcgcaaaggtc-----------actaattgaaccagttttaaacatttcagtttctcttctctgacctgtatg |
2836257 |
T |
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| Q |
201 |
atcgaacaatttagaatggatatttgtgtatgtttagaatgaatctttgcctatg |
255 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
2836256 |
atcgaacaatttagaatggatattggtgtatgtttagaatgaatctttgcctatg |
2836202 |
T |
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