View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19182_low_16 (Length: 227)

Name: NF19182_low_16
Description: NF19182
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19182_low_16
NF19182_low_16
[»] chr4 (41 HSPs)
chr4 (7-222)||(30064339-30064560)
chr4 (150-226)||(53831155-53831231)
chr4 (149-222)||(5547992-5548065)
chr4 (150-227)||(30064005-30064082)
chr4 (158-227)||(33641862-33641931)
chr4 (51-107)||(30050374-30050430)
chr4 (145-221)||(47742229-47742305)
chr4 (143-227)||(47742578-47742662)
chr4 (147-197)||(37831592-37831642)
chr4 (151-222)||(25423781-25423851)
chr4 (167-222)||(53831299-53831354)
chr4 (145-227)||(13388159-13388240)
chr4 (160-227)||(1186671-1186738)
chr4 (160-227)||(8143046-8143113)
chr4 (160-227)||(29776853-29776920)
chr4 (149-227)||(18961846-18961924)
chr4 (145-227)||(31761836-31761918)
chr4 (160-222)||(38828521-38828583)
chr4 (146-196)||(52865379-52865429)
chr4 (158-219)||(3369858-3369919)
chr4 (147-196)||(13825881-13825929)
chr4 (145-194)||(53578922-53578971)
chr4 (147-227)||(35901786-35901866)
chr4 (145-209)||(41148163-41148227)
chr4 (150-220)||(5547616-5547687)
chr4 (160-227)||(6033846-6033913)
chr4 (143-222)||(13306891-13306970)
chr4 (150-209)||(41148552-41148611)
chr4 (160-227)||(44271912-44271979)
chr4 (146-197)||(51362535-51362586)
chr4 (160-222)||(9592369-9592431)
chr4 (145-195)||(41467126-41467176)
chr4 (160-222)||(53060423-53060485)
chr4 (150-227)||(1420538-1420614)
chr4 (160-197)||(6033907-6033944)
chr4 (158-195)||(16322988-16323025)
chr4 (146-227)||(22589425-22589506)
chr4 (145-222)||(35830284-35830361)
chr4 (148-224)||(14449274-14449350)
chr4 (160-196)||(33166289-33166325)
chr4 (150-226)||(35615317-35615393)
[»] chr2 (35 HSPs)
chr2 (150-227)||(17850468-17850545)
chr2 (138-227)||(14816031-14816120)
chr2 (141-222)||(12802443-12802524)
chr2 (148-227)||(29370717-29370796)
chr2 (160-222)||(11363895-11363957)
chr2 (145-219)||(23993901-23993975)
chr2 (145-227)||(35500325-35500407)
chr2 (145-227)||(44078523-44078605)
chr2 (150-227)||(14815701-14815778)
chr2 (160-221)||(28719330-28719391)
chr2 (160-222)||(52278-52340)
chr2 (145-195)||(12948887-12948937)
chr2 (145-222)||(23686799-23686876)
chr2 (148-227)||(8740422-8740500)
chr2 (160-227)||(14983934-14984001)
chr2 (160-227)||(23048303-23048370)
chr2 (145-227)||(4423753-4423835)
chr2 (150-196)||(20662518-20662564)
chr2 (158-227)||(9780919-9780988)
chr2 (145-222)||(28733222-28733299)
chr2 (146-227)||(37431772-37431852)
chr2 (145-213)||(21631816-21631884)
chr2 (144-227)||(8740151-8740234)
chr2 (160-222)||(19889456-19889518)
chr2 (160-222)||(21633306-21633368)
chr2 (160-222)||(43891657-43891719)
chr2 (160-221)||(2755189-2755250)
chr2 (150-195)||(4856712-4856757)
chr2 (150-195)||(15023104-15023149)
chr2 (144-221)||(39672661-39672737)
chr2 (149-197)||(2609080-2609128)
chr2 (145-197)||(14489474-14489526)
chr2 (153-197)||(20650376-20650420)
chr2 (141-197)||(36177354-36177410)
chr2 (146-222)||(43890099-43890175)
[»] chr3 (40 HSPs)
chr3 (144-227)||(53255258-53255341)
chr3 (150-227)||(32831163-32831240)
chr3 (158-227)||(53254974-53255043)
chr3 (150-222)||(51453545-51453616)
chr3 (150-221)||(32831468-32831539)
chr3 (145-227)||(49001648-49001730)
chr3 (160-222)||(54477308-54477370)
chr3 (145-227)||(55228040-55228122)
chr3 (158-227)||(37755171-37755240)
chr3 (160-227)||(51224939-51225006)
chr3 (147-222)||(51226489-51226564)
chr3 (160-227)||(54476056-54476123)
chr3 (145-219)||(3354927-3355001)
chr3 (144-227)||(5049580-5049664)
chr3 (143-195)||(6128517-6128569)
chr3 (142-194)||(14349375-14349427)
chr3 (150-221)||(1807413-1807483)
chr3 (160-227)||(17256581-17256648)
chr3 (160-227)||(17258164-17258231)
chr3 (160-222)||(2181328-2181390)
chr3 (153-219)||(3354755-3354821)
chr3 (160-222)||(32772019-32772081)
chr3 (160-222)||(33447210-33447272)
chr3 (160-222)||(40988611-40988673)
chr3 (150-196)||(48348258-48348304)
chr3 (160-222)||(49002740-49002802)
chr3 (160-222)||(50380168-50380230)
chr3 (142-195)||(3193047-3193100)
chr3 (143-204)||(7218412-7218473)
chr3 (146-227)||(10732381-10732462)
chr3 (142-195)||(16883800-16883853)
chr3 (150-227)||(17773173-17773250)
chr3 (150-227)||(19074474-19074551)
chr3 (150-227)||(20432193-20432270)
chr3 (160-221)||(32770664-32770725)
chr3 (142-227)||(33944843-33944928)
chr3 (161-222)||(36315803-36315864)
chr3 (150-195)||(50420887-50420932)
chr3 (145-197)||(4474331-4474383)
chr3 (147-227)||(44586020-44586100)
[»] chr5 (29 HSPs)
chr5 (145-227)||(6464309-6464391)
chr5 (143-227)||(20126434-20126518)
chr5 (145-227)||(20126652-20126736)
chr5 (159-222)||(36361400-36361463)
chr5 (145-225)||(7611403-7611483)
chr5 (143-209)||(42585982-42586048)
chr5 (146-222)||(38163654-38163730)
chr5 (152-227)||(26702647-26702722)
chr5 (152-227)||(26972380-26972455)
chr5 (145-227)||(36361031-36361113)
chr5 (147-195)||(13428143-13428191)
chr5 (147-195)||(42169084-42169132)
chr5 (168-227)||(7611095-7611154)
chr5 (160-227)||(26366059-26366125)
chr5 (160-227)||(38162606-38162673)
chr5 (150-209)||(42586339-42586398)
chr5 (149-227)||(28769716-28769793)
chr5 (158-196)||(34969162-34969200)
chr5 (146-195)||(3999085-3999134)
chr5 (141-222)||(24405484-24405565)
chr5 (150-227)||(25693904-25693981)
chr5 (150-227)||(37897951-37898028)
chr5 (146-195)||(43098027-43098076)
chr5 (145-197)||(2974898-2974950)
chr5 (150-222)||(3333940-3334012)
chr5 (146-222)||(10169014-10169090)
chr5 (150-222)||(17235139-17235211)
chr5 (145-213)||(20364680-20364748)
chr5 (167-227)||(38974911-38974971)
[»] chr7 (42 HSPs)
chr7 (149-222)||(34116105-34116177)
chr7 (160-227)||(10691311-10691378)
chr7 (158-227)||(7873865-7873934)
chr7 (146-227)||(9477132-9477213)
chr7 (145-222)||(29933512-29933589)
chr7 (146-224)||(6385785-6385863)
chr7 (145-227)||(7873507-7873589)
chr7 (150-227)||(43078037-43078114)
chr7 (150-227)||(43092014-43092091)
chr7 (147-227)||(10691623-10691703)
chr7 (143-222)||(9142960-9143039)
chr7 (143-209)||(282853-282919)
chr7 (140-222)||(18186432-18186514)
chr7 (145-227)||(26787900-26787982)
chr7 (145-227)||(26974228-26974310)
chr7 (147-213)||(44565263-44565329)
chr7 (158-227)||(24679078-24679147)
chr7 (145-222)||(46199051-46199128)
chr7 (145-209)||(327430-327494)
chr7 (150-221)||(9477430-9477501)
chr7 (150-196)||(9500167-9500213)
chr7 (146-219)||(24432637-24432709)
chr7 (150-219)||(27756268-27756337)
chr7 (150-227)||(29933193-29933270)
chr7 (150-219)||(35793378-35793447)
chr7 (150-227)||(48059180-48059257)
chr7 (145-197)||(21939338-21939390)
chr7 (160-227)||(8409305-8409372)
chr7 (160-227)||(42436842-42436909)
chr7 (146-221)||(42438016-42438091)
chr7 (147-222)||(46265865-46265939)
chr7 (145-227)||(6792030-6792112)
chr7 (150-195)||(20185181-20185226)
chr7 (145-218)||(24432334-24432407)
chr7 (150-227)||(28350119-28350196)
chr7 (145-222)||(36801839-36801916)
chr7 (142-195)||(47909590-47909643)
chr7 (151-227)||(21505851-21505927)
chr7 (167-227)||(30505115-30505175)
chr7 (150-221)||(43091668-43091740)
chr7 (165-221)||(44135548-44135604)
chr7 (150-222)||(46266492-46266564)
[»] chr1 (48 HSPs)
chr1 (150-226)||(37008220-37008296)
chr1 (143-221)||(7196951-7197029)
chr1 (150-227)||(7196679-7196756)
chr1 (158-227)||(40876979-40877048)
chr1 (142-227)||(51549374-51549459)
chr1 (158-222)||(6129255-6129319)
chr1 (166-226)||(6129601-6129661)
chr1 (160-227)||(50503714-50503781)
chr1 (150-224)||(46895440-46895514)
chr1 (140-213)||(6912428-6912501)
chr1 (158-227)||(46895774-46895843)
chr1 (158-222)||(45719688-45719751)
chr1 (144-227)||(3814757-3814839)
chr1 (150-209)||(12075265-12075324)
chr1 (160-227)||(35580902-35580969)
chr1 (160-227)||(40345564-40345631)
chr1 (143-209)||(3815048-3815114)
chr1 (160-222)||(4474768-4474830)
chr1 (160-222)||(21258932-21258994)
chr1 (160-222)||(50504789-50504851)
chr1 (160-221)||(7058363-7058424)
chr1 (158-219)||(10231118-10231179)
chr1 (150-227)||(39642203-39642280)
chr1 (145-222)||(41915761-41915838)
chr1 (149-222)||(43117257-43117330)
chr1 (174-222)||(15788437-15788485)
chr1 (151-195)||(23953116-23953160)
chr1 (158-222)||(40876711-40876775)
chr1 (150-209)||(12074959-12075018)
chr1 (150-197)||(18632603-18632650)
chr1 (145-196)||(29816436-29816487)
chr1 (158-221)||(50877796-50877859)
chr1 (143-221)||(367159-367237)
chr1 (160-222)||(4476180-4476242)
chr1 (145-195)||(10532213-10532263)
chr1 (160-222)||(26811466-26811528)
chr1 (145-219)||(39384569-39384643)
chr1 (145-227)||(46038898-46038980)
chr1 (142-195)||(1484689-1484742)
chr1 (150-227)||(3377504-3377581)
chr1 (146-227)||(6606933-6607014)
chr1 (145-222)||(13344414-13344491)
chr1 (150-186)||(366889-366925)
chr1 (167-195)||(3612124-3612152)
chr1 (143-195)||(44743735-44743787)
chr1 (147-195)||(46880738-46880786)
chr1 (175-227)||(49695378-49695430)
chr1 (146-198)||(50401634-50401686)
[»] chr8 (35 HSPs)
chr8 (160-227)||(45163694-45163761)
chr8 (150-227)||(12278838-12278915)
chr8 (146-227)||(27225780-27225860)
chr8 (158-222)||(14170433-14170497)
chr8 (158-222)||(35795570-35795634)
chr8 (158-221)||(17512108-17512171)
chr8 (147-227)||(1003458-1003538)
chr8 (165-221)||(1003785-1003841)
chr8 (160-222)||(23936292-23936354)
chr8 (145-227)||(41602845-41602927)
chr8 (145-227)||(45522425-45522507)
chr8 (144-197)||(756121-756174)
chr8 (158-227)||(23475635-23475704)
chr8 (146-227)||(29340767-29340848)
chr8 (150-209)||(755906-755965)
chr8 (145-196)||(2802646-2802697)
chr8 (160-227)||(5916890-5916957)
chr8 (148-227)||(25896991-25897070)
chr8 (147-221)||(14170677-14170751)
chr8 (147-213)||(34539184-34539249)
chr8 (146-195)||(6041463-6041512)
chr8 (146-195)||(6045100-6045149)
chr8 (150-195)||(9499223-9499268)
chr8 (158-227)||(35795228-35795297)
chr8 (144-197)||(42217812-42217865)
chr8 (150-222)||(18092914-18092985)
chr8 (160-227)||(8347564-8347631)
chr8 (145-192)||(29196631-29196678)
chr8 (160-227)||(45308467-45308534)
chr8 (160-222)||(31947867-31947929)
chr8 (146-204)||(37263357-37263415)
chr8 (174-227)||(8409799-8409852)
chr8 (160-197)||(18650944-18650981)
chr8 (174-222)||(12280340-12280388)
chr8 (182-222)||(18621756-18621796)
[»] scaffold0468 (1 HSPs)
scaffold0468 (150-227)||(10354-10431)
[»] scaffold0854 (1 HSPs)
scaffold0854 (160-222)||(3366-3428)
[»] chr6 (18 HSPs)
chr6 (150-227)||(12798730-12798806)
chr6 (146-222)||(12203891-12203967)
chr6 (150-221)||(2538986-2539056)
chr6 (179-222)||(10582137-10582180)
chr6 (160-227)||(11623172-11623239)
chr6 (158-204)||(5003100-5003146)
chr6 (160-222)||(28574545-28574607)
chr6 (145-222)||(12799031-12799108)
chr6 (150-195)||(30369787-30369832)
chr6 (160-227)||(2017185-2017252)
chr6 (150-224)||(33401292-33401364)
chr6 (160-222)||(2173858-2173920)
chr6 (160-222)||(4037051-4037113)
chr6 (150-219)||(2164699-2164768)
chr6 (150-219)||(2176332-2176401)
chr6 (148-197)||(7504886-7504935)
chr6 (150-194)||(9070136-9070180)
chr6 (149-225)||(31001275-31001350)
[»] scaffold0019 (1 HSPs)
scaffold0019 (160-227)||(122563-122630)
[»] scaffold0286 (2 HSPs)
scaffold0286 (160-222)||(20121-20183)
scaffold0286 (150-219)||(17641-17710)
[»] scaffold0016 (1 HSPs)
scaffold0016 (160-222)||(201232-201294)
[»] scaffold0725 (1 HSPs)
scaffold0725 (145-194)||(6698-6747)
[»] scaffold0028 (1 HSPs)
scaffold0028 (150-227)||(32243-32320)
[»] scaffold0182 (1 HSPs)
scaffold0182 (167-227)||(21185-21245)


Alignment Details
Target: chr4 (Bit Score: 167; Significance: 1e-89; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 7 - 222
Target Start/End: Complemental strand, 30064560 - 30064339
Alignment:
Q  7 gatgcatggtgtgtttagtggtttgtgagccattatatatttgctgggcctgggagttagagatagaggagaaagatgaaggttgatggttggtgg---- 102  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
T  30064560 gatgcatggtgtgttttgtggtttgtgagccattatatatttgctgggcctgggagttagagatagaggagaaagatgaaggttgatggttggtggttgt 30064461  T
Q  103 --ttgaatctagagacgagcatattttggcatagtagataataataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttc 200  Q
      |||||  |||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  30064460 acttgaaggtagagatgagtatattttggcatagtagataataataggcttaatagtagttttggctccctaagttttaagaagttgcgattttggctcc 30064361  T
Q  201 ctaactaaataaactacaaaac 222  Q
    ||||||||||||||||||||||    
T  30064360 ctaactaaataaactacaaaac 30064339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 53831155 - 53831231
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgcc 226  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  53831155 ttaatagcagttttggccccctatgttttaagaagttgcgattttggtcccctaactaaataaactacaaaactgcc 53831231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 5548065 - 5547992
Alignment:
Q  149 tttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  5548065 tttaatagcagttttggcctcctatgttttaagaagttgcgattttggcctcctaattaaataaactacaaaac 5547992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 30064005 - 30064082
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||   ||||||||| ||||||||||||| ||||    
T  30064005 ttaatagaagttttggccccctatgttttaagaagttgcgattttggtcccctaactaagtaaactacaaaaccgccc 30064082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 33641862 - 33641931
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||| || |||||||||| ||||||||||| | |||||||||||||||||||||||||||||    
T  33641862 agttttggccccttatgttttaagaaattgcgattttgacctcctaactaaataaactacaaaactgccc 33641931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 30050430 - 30050374
Alignment:
Q  51 tgggcctgggagttagagatagaggagaaagatgaaggttgatggttggtggttgaa 107  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  30050430 tgggcctgggagttagagatagaggagaaaggtgaaggttgatcgttggtggttgaa 30050374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 47742229 - 47742305
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||||||||| ||||||| || |||| |||| | |||||||||||||||||  ||||||||||||||||||||||    
T  47742229 taggtttaatagcagttttgtccacctatgtttcaggaagttgcgattttggccccctaactaaataaactacaaaa 47742305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 227
Target Start/End: Complemental strand, 47742662 - 47742578
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||||||| ||||||| ||||||| ||||||||||||| ||||||| ||  |||||||||||||| |||||||| ||||    
T  47742662 aataagtttaatagcagttttgaccccctatgttttaagaagttacgattttagccccctaactaaataaattacaaaaccgccc 47742578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 37831592 - 37831642
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  37831592 ggtttaatagcagttttagccccctaagttttaagaagttgcgattttggc 37831642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 151 - 222
Target Start/End: Original strand, 25423781 - 25423851
Alignment:
Q  151 taatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||||||||||| |||| | |||||||||||||| || ||||||| ||||||| ||||||||    
T  25423781 taatagtagttttggccccctatgtttca-gaagttgcgatttttgcctcctaacaaaataaaatacaaaac 25423851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 53831354 - 53831299
Alignment:
Q  167 cccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||| |||||||||||||||||||||| | |||||| |||||||||||||||||    
T  53831354 cccctatgttttaagaagttgcgattttgacctcctaattaaataaactacaaaac 53831299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 13388159 - 13388240
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||| | ||||||||||||||| |||| ||||||| | |||||||||  ||||||||||||||||||||||| ||||    
T  13388159 taggcttaattgcagttttggccccctatgtttcaagaagtagagattttggc-ccctaactaaataaactacaaaaccgccc 13388240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 1186671 - 1186738
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||||| |||| | ||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  1186671 ttttggccccctaactttttaaaagttgcgattttggccccctaactaattaaaatacaaaacagccc 1186738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 8143046 - 8143113
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| |||| |||||||||||||||||||||||   ||||||||| |||| |||||||| ||||    
T  8143046 ttttggcctcctatgttttaagaagttgcgattttggacccctaactaattaaaatacaaaacagccc 8143113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 29776920 - 29776853
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||| ||||||||||| || |||||||| | ||||||||| |||| |||||||| ||||    
T  29776920 ttttggccccctatgttttaagaagctgtgattttggatccctaactaattaaaatacaaaacagccc 29776853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 18961846 - 18961924
Alignment:
Q  149 tttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||| ||| |||||||||||||  |||| | ||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  18961846 tttaattgtacttttggccccctatcttttcaaaagttgcgattttggccacctaactaattaaattacaaaacagccc 18961924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 31761918 - 31761836
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| ||| |||||||||||||  ||| |||||||| ||||||||||  ||||||||| |||| || ||||| ||||    
T  31761918 taggtttaattgtacttttggccccctatatttcaagaagttacgattttggccccctaactaattaaaatagaaaacagccc 31761836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 38828521 - 38828583
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||| ||| |||||||||||||||||||||||  || ||||||| |||| ||||||||    
T  38828521 ttttggccctctatgttttaagaagttgcgattttggactcataactaattaaaatacaaaac 38828583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 52865379 - 52865429
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttgg 196  Q
    ||||||||||| |||||  ||||| ||||||||||||||||||||||||||    
T  52865379 aggtttaatagcagtttcagccccataagttttaagaagttgcgattttgg 52865429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Original strand, 3369858 - 3369919
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    |||||| ||||||||||| | |||||||||||||||||||  |||||| ||||||| |||||    
T  3369858 agtttttgccccctaagtatcaagaagttgcgattttggccccctaacaaaataaaatacaa 3369919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 13825881 - 13825929
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttgg 196  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||||||    
T  13825881 ggtttaatagcagttttagcccc-taagttttaagaagttgcgattttgg 13825929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 53578971 - 53578922
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgatttt 194  Q
    |||| |||||||  |||||||||||||| |||||||||||||||||||||    
T  53578971 taggcttaatagccgttttggccccctatgttttaagaagttgcgatttt 53578922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 35901866 - 35901786
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| | | |||||| |||||| ||||  | ||||||||||||||||| ||||||||| |||| |||||||| ||||    
T  35901866 ggtttaattgcacttttggtcccctatgtttctaaaagttgcgattttggctccctaactaattaaaatacaaaacagccc 35901786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 209
Target Start/End: Original strand, 41148163 - 41148227
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    |||| ||||||| ||||||||||||||| |||| |||||||| ||||||| ||  ||||||||||    
T  41148163 taggcttaatagcagttttggccccctatgtttcaagaagttccgattttagccccctaactaaa 41148227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 5547616 - 5547687
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaact-aaataaactacaaa 220  Q
    ||||||| ||||||||||| ||   ||| ||||||||| ||||||||| |||||||| ||||||||||||||    
T  5547616 ttaatagcagttttggccctctgtatttcaagaagttgagattttggcctcctaactaaaataaactacaaa 5547687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 6033913 - 6033846
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| || |||| |||||||||||||||||||   |||||||| |||| |||||||| ||||    
T  6033913 ttttggccccatatgtttcaagaagttgcgattttggccctctaactaattaaaatacaaaacagccc 6033846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 143 - 222
Target Start/End: Complemental strand, 13306970 - 13306891
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||| | | |||||||||||||  |||| | |||||||||||||| | |||||||||| |||| || |||||    
T  13306970 aataggtttaattgcacttttggccccctatcttttcaaaagttgcgattttgacctcctaactaattaaaatataaaac 13306891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 41148611 - 41148552
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    ||||||| |||||||||||||||  ||||||||||||| ||||||||   ||||||||||    
T  41148611 ttaatagcagttttggccccctatattttaagaagttgtgattttggtcccctaactaaa 41148552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 44271979 - 44271912
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| | || ||||||||||||||| ||||||| | ||||||||| |||| |||||||| ||||    
T  44271979 ttttggcctcatatgttttaagaagttgcaattttggatccctaactaattaaaatacaaaacagccc 44271912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 51362535 - 51362586
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||||||||||||||||| ||||||||| ||||   ||||||||||||||||    
T  51362535 aggtttaatagtagttttagccccctaacttttctaaagttgcgattttggc 51362586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 9592431 - 9592369
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||  |||| | |||||||||||||||| | |||||||| |||| ||||||||    
T  9592431 ttttggccccctatcttttcaaaagttgcgattttggccttctaactaattaaaatacaaaac 9592369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 41467126 - 41467176
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||||||||||| |||||| || ||||||||||||| ||||| ||||||||    
T  41467126 taggtttaatagcagttttagcaccctaagttttaaaaagttacgattttg 41467176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 53060423 - 53060485
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||| || ||||||||||| ||||||||||||  ||||| ||| |||| ||||||||    
T  53060423 ttttggccccttatgttttaagaaggtgcgattttggccccctaattaattaaaatacaaaac 53060485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 1420538 - 1420614
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| ||||||||| ||||   |||||||||||||||| ||||||  ||| |||||||||||| ||||    
T  1420538 ttaatagcagttttagccccctaacttttccaaagttgcgattttggcctcctaa-aaaaaaaactacaaaaccgccc 1420614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 6033944 - 6033907
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||||||||||||  |||||||||||||||||||||||    
T  6033944 ttttggccccctatattttaagaagttgcgattttggc 6033907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 16322988 - 16323025
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  16322988 agttttggccccttaagtattaagaagttgcgattttg 16323025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 22589506 - 22589425
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||| | | |||||||||||||  |||  | ||||||||||||| ||| ||||||||| |||| |||||||| ||||    
T  22589506 aggtttaattgcacttttggccccctatctttctaaaagttgcgatttttgctccctaactaattaaaatacaaaacagccc 22589425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 35830361 - 35830284
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||| ||||||| |||||||||| ||||  ||| ||||||||| |||||| |   ||||| |||||||||||||||||    
T  35830361 taggcttaatagcagttttggcctcctatatttcaagaagttgtgatttttgtcccctaaataaataaactacaaaac 35830284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 224
Target Start/End: Original strand, 14449274 - 14449350
Alignment:
Q  148 gtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactg 224  Q
    ||||||||| |||||| ||||||||| ||| | ||||||| |||||||||  |||||  |||  |||||||||||||    
T  14449274 gtttaatagcagttttcgccccctaactttcacgaagttgagattttggccccctaagaaaaacaactacaaaactg 14449350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 196
Target Start/End: Original strand, 33166289 - 33166325
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttgg 196  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  33166289 ttttggccctctatgttttaagaagttgcgattttgg 33166325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 35615317 - 35615393
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgcc 226  Q
    ||||||| |||||| ||||||||| ||||   ||||||||||||||||  |||||   || ||||||||||||||||    
T  35615317 ttaatagcagttttagccccctaacttttctaaagttgcgattttggccccctaaaggaaaaaactacaaaactgcc 35615393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 17850545 - 17850468
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  17850545 ttaatagtagttttggccccctatgttttaagaagttgcgattttggcctcctaactaaataaactacaaaattgccc 17850468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 138 - 227
Target Start/End: Complemental strand, 14816120 - 14816031
Alignment:
Q  138 ataataataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| |||||| ||||||| ||||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  14816120 ataaaaataggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaactaaataaactacaaaaccgccc 14816031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 12802524 - 12802443
Alignment:
Q  141 ataataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||| ||| ||||||| ||||||||| ||||| |||| ||||||||||||||||||  | ||||||||||||||||||||||    
T  12802524 ataaaaggcttaatagcagttttggctccctatgtttcaagaagttgcgattttggtcttctaactaaataaactacaaaac 12802443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 29370717 - 29370796
Alignment:
Q  148 gtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||    ||| || ||||||| |||||||||||||    
T  29370717 gtttaatagaagttttggccccctatgttttaagaagttgcgattttgatcccctgacaaaataaaatacaaaactgccc 29370796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 11363895 - 11363957
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||||||| |||| ||||||||    
T  11363895 ttttggccccctatgtttcaagaagttgcgattttggctccctaactaattaaaatacaaaac 11363957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 23993975 - 23993901
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    |||||||||||| ||||||||| |||||||| |||||||||||| ||||||||  |||||| ||||||| |||||    
T  23993975 taggtttaatagcagttttggctccctaagtattaagaagttgcaattttggccccctaacaaaataaaatacaa 23993901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 35500407 - 35500325
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||||||||||||||  ||||| |||| |||||||||||||||||||  |||||| ||||||| |||||||| ||||    
T  35500407 taggcttaatagtagttttggggccctatgtttcaagaagttgcgattttggccccctaacaaaataaaatacaaaaccgccc 35500325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 44078605 - 44078523
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| | | ||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| ||| |||| ||||    
T  44078605 taggtttaattgcacttttggccccctatgttttaagaagttgcgattttggttccctaactaattaaaataccaaacagccc 44078523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 14815701 - 14815778
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| ||||||||||||||| |||| ||||||||||| ||||||   | ||||||||||||||||||||| ||||    
T  14815701 ttaatagcagttttggccccctatgtttcaagaagttgcggttttggtcccttaactaaataaactacaaaaccgccc 14815778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 28719330 - 28719391
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    ||||||||||||| ||||||||||||||||||||||||  ||||||||| |||| |||||||    
T  28719330 ttttggccccctatgttttaagaagttgcgattttggccccctaactaattaaaatacaaaa 28719391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 52340 - 52278
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||||||||| |||||||||||||  ||||||||| |||| ||||||||    
T  52340 ttttggccccctatgttttaagaatttgcgattttggccccctaactaattaaaatacaaaac 52278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 12948887 - 12948937
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  12948887 taggtttaatagcagttttagccccctaaattttaagaagttgcgattttg 12948937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 23686876 - 23686799
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||| ||| |||||||||| || ||||||||| |||||||||||||  |||||| ||| |||| ||||||||    
T  23686876 taggtttaattgtacttttggccccttatgttttaagatgttgcgattttggactcctaattaattaaaatacaaaac 23686799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 8740500 - 8740422
Alignment:
Q  148 gtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| | |||||||||||| || |||| ||||||||||||||||| |  | ||||||||||||||||||||| ||||    
T  8740500 gtttaattgcagttttggcccc-tatgtttcaagaagttgcgattttgaccccttaactaaataaactacaaaaccgccc 8740422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 14984001 - 14983934
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| || |||||||||||||||||||||||   ||||||||| |||| |||||||| ||||    
T  14984001 ttttggccccgtatgttttaagaagttgcgattttggtcccctaactaattaaaatacaaaacagccc 14983934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 23048303 - 23048370
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| ||  |||||||||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  23048303 ttttggccccttatattttaagaagttgcgattttggccccctaactaattaaaatacaaaacagccc 23048370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 4423835 - 4423753
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| | ||||||  | ||||| ||||||| |||||||||||||| |  | ||||||||||||||||||||| ||||    
T  4423835 taggtttaattgcagttttaactccctatgttttaaaaagttgcgattttgaccccataactaaataaactacaaaaccgccc 4423753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 20662518 - 20662564
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttgg 196  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||    
T  20662518 ttaatagtagttttaaccccctaagtttaaagaagttgcgattttgg 20662564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 9780988 - 9780919
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||| || ||||||| ||||||||||||||     |||||||||||||||||||||| ||||    
T  9780988 agttttggccccttatgttttaaaaagttgcgattttgatcctctaactaaataaactacaaaaccgccc 9780919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 28733299 - 28733222
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||| ||||| ||| |||||| |||||| ||||||| ||||||||||||||||  | ||||||| |||| ||||||||    
T  28733299 taggcttaattgtatttttggtcccctatgttttaaaaagttgcgattttggccccttaactaattaaaatacaaaac 28733222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 37431852 - 37431772
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||| |||||| ||||||||| ||  | ||||||||||||||||| ||||||  ||| |||||||||||| ||||    
T  37431852 aggtttaatagcagttttcgccccctaacttccacgaagttgcgattttggcctcctaa-gaaaaaaactacaaaaccgccc 37431772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 21631816 - 21631884
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaa 213  Q
    |||||||||| | | ||||||||||||| |||| | |||||||||||||||||  ||||||||| ||||    
T  21631816 taggtttaattgcacttttggccccctatgtttcatgaagttgcgattttggccccctaactaattaaa 21631884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 8740151 - 8740234
Alignment:
Q  144 ataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||| ||||| | ||||||  |||||||  ||||||||||||||||||||| |   ||||||||||||| || ||||||||||    
T  8740151 ataggcttaattgcagttttaaccccctatattttaagaagttgcgattttgaccctctaactaaataaattataaaactgccc 8740234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 19889518 - 19889456
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||| ||  |||| | |||||||||||||||| |||||||||| |||| ||||||||    
T  19889518 ttttggccccatatcttttcaaaagttgcgattttggcctcctaactaattaaaatacaaaac 19889456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 21633368 - 21633306
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| ||||||||||||||| | |||||   ||||||||| |||| ||||||||    
T  21633368 ttttggccccctatgttttaagaagttgcaactttggacccctaactaattaaaatacaaaac 21633306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 43891719 - 43891657
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||||||||| ||| |||||| |  |||||||||| |||| ||||||||    
T  43891719 ttttggccccctatgttttaagaaattgtgattttagactcctaactaattaaaatacaaaac 43891657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 2755250 - 2755189
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||||||||||  |||| | ||||||||||||||||  ||||||||| |||| |||||||    
T  2755250 ttttggccccctatcttttcaaaagttgcgattttggccccctaactaattaaaatacaaaa 2755189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 4856712 - 4856757
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||| |||||||||||| || |||| |||||||||||||||||    
T  4856712 ttaatagcagttttggccccttatgtttcaagaagttgcgattttg 4856757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 15023149 - 15023104
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||| |||||||||||||||| ||| ||||||||| |||||||    
T  15023149 ttaatagcagttttggccccctaactttcaagaagttgtgattttg 15023104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 221
Target Start/End: Complemental strand, 39672737 - 39672661
Alignment:
Q  144 ataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    ||||| ||||| | |||||||||||| || |||| ||||||||| ||||||||   | ||||||||||||||||||||    
T  39672737 ataggcttaattgcagttttggcccc-tatgtttcaagaagttgtgattttggtcccataactaaataaactacaaaa 39672661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 197
Target Start/End: Original strand, 2609080 - 2609128
Alignment:
Q  149 tttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    ||||||||||||||| ||||||||| ||||| ||||||  |||||||||    
T  2609080 tttaatagtagttttcgccccctaacttttacgaagttttgattttggc 2609128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 14489526 - 14489474
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||| ||||||| |||||| ||||||||| ||| | |||||||||||||||||    
T  14489526 taggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggc 14489474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 20650376 - 20650420
Alignment:
Q  153 atagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||| |||||| ||||||||||||| ||||||||| |||||||||    
T  20650376 atagcagttttagccccctaagtttcaagaagttgagattttggc 20650420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Complemental strand, 36177410 - 36177354
Alignment:
Q  141 ataataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||| ||| ||||||  |||||| ||||| ||||||| |||||||||||||||||||    
T  36177410 ataaaaggcttaataacagttttagccccttaagtttcaagaagttgcgattttggc 36177354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 43890099 - 43890175
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||| | | |||||| |||||| |||| ||||||||||||||||||   | ||||||| |||| ||||||||    
T  43890099 aggtttaattgcacttttggtcccctatgtttgaagaagttgcgattttggtcccttaactaattaaaatacaaaac 43890175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 53255341 - 53255258
Alignment:
Q  144 ataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||| ||||||| |||||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  53255341 ataggcttaatagcagttttggcctcctatgttttaagaagttgcgattttggccccctaactaaataaactacaaaaccgccc 53255258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 32831163 - 32831240
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| ||||||||||||||| |||| |||||||| | ||||||||||| ||||||||||||||| || |||||||    
T  32831163 ttaatagcagttttggccccctatgtttcaagaagttacaattttggcttcttaactaaataaactaaaatactgccc 32831240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 53254974 - 53255043
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||| |||| |||||||||||||||||||   |||||||||||||||||||||| ||||    
T  53254974 agttttggccccctatgtttcaagaagttgcgattttggccctctaactaaataaactacaaaaccgccc 53255043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 51453545 - 51453616
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||| ||||||| |||| || |||||||||||||||||||||| |  |||||||||||||||||||||||    
T  51453545 ttaatagcagttttgacccc-tatgttttaagaagttgcgattttgaccccctaactaaataaactacaaaac 51453616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 32831539 - 32831468
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||| |||||||||||||||| |||| || ||||||| |||||||   ||||||||||||||||||||||    
T  32831539 ttaataatagttttggccccctatgtttaaaaaagttgcaattttggtcccctaactaaataaactacaaaa 32831468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 49001648 - 49001730
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||| ||| ||||||||| ||| |||||||||| ||||||||||| | |||||||||| |||| |||||||| ||||    
T  49001648 taggcttaattgtacttttggccctctatgttttaagaaattgcgattttgacctcctaactaattaaaatacaaaacagccc 49001730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 54477370 - 54477308
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||||||||||||| ||||||||| |||||| ||| |||| ||||||||    
T  54477370 ttttggccccctatgttttaagaagttgtgattttggcctcctaattaactaaaatacaaaac 54477308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 55228122 - 55228040
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||  || |||||||||||||  ||||||||||||||||||||||   ||||||||| |||| |||||||| ||||    
T  55228122 taggtttaattatacttttggccccctatattttaagaagttgcgattttggacccctaactaattaaaatacaaaacagccc 55228040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 37755240 - 37755171
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||| |||| | |||||||||||||| ||  ||||||||||||||||| ||||| ||||    
T  37755240 agttttggccccctatgtttcatgaagttgcgattttagccccctaactaaataaactataaaaccgccc 37755171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 51224939 - 51225006
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| |||| |||| |||||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  51224939 ttttggcctcctatgtttcaagaagttgcgattttggccccctaactaattaaaatacaaaacagccc 51225006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 51226564 - 51226489
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||| | | |||||| |||||| |||||||||||||||||||||||   ||||||||| |||| ||||||||    
T  51226564 ggtttaattgcacttttggtcccctatgttttaagaagttgcgattttggacccctaactaattaaaatacaaaac 51226489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 54476056 - 54476123
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||||  ||||||||||||||||||||| |  ||||||||| |||| |||||||| ||||    
T  54476056 ttttggccccctatattttaagaagttgcgattttgaccccctaactaattaaaatacaaaacagccc 54476123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 3355001 - 3354927
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    |||| ||||||| || ||||||||||||||| | ||||||||||||||||||   |||||| ||||||| |||||    
T  3355001 taggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaacaaaataaaatacaa 3354927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 227
Target Start/End: Complemental strand, 5049664 - 5049580
Alignment:
Q  144 ataggtttaatagtagttttggccccctaag-ttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||| | | |||||||||||| |  |||| | |||||||||||||||| |||||||||| |||| |||||||| ||||    
T  5049664 ataggtttaattgcacttttggcccccttatcttttcaaaagttgcgattttggcctcctaactaattaaaatacaaaacagccc 5049580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 6128569 - 6128517
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||| |||||||| ||||||||||| |||  |||||||||||||||||||||    
T  6128569 aatagatttaatagcagttttggcccactatattttaagaagttgcgattttg 6128517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 194
Target Start/End: Complemental strand, 14349427 - 14349375
Alignment:
Q  142 taataggtttaatagtagttttggccccctaagttttaagaagttgcgatttt 194  Q
    ||||||| ||||||| |||||| ||||||||| ||||| ||||||||||||||    
T  14349427 taataggcttaatagcagttttcgccccctaacttttacgaagttgcgatttt 14349375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 1807483 - 1807413
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    ||||||| |||||||||||||||  ||||||||| |||||||||||| |||| ||  ||||||| |||||||    
T  1807483 ttaatagcagttttggccccctatattttaagaatttgcgattttgg-ttcccaaaaaaataaaatacaaaa 1807413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 17256581 - 17256648
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||||  ||| |||||||||| ||||||||  ||||||||| |||| |||||||| ||||    
T  17256581 ttttggccccctatatttcaagaagttgcaattttggccccctaactaattaaaatacaaaacagccc 17256648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 17258231 - 17258164
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||| |||| ||||||||||||||||||   |||||| || |||| |||||||| ||||    
T  17258231 ttttggccccctatgtttcaagaagttgcgattttggacccctaacaaattaaaatacaaaacagccc 17258164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 2181328 - 2181390
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||| ||||||||||||||||||   |||||| || |||| ||||||||    
T  2181328 ttttggccccctatgtttcaagaagttgcgattttggacccctaacgaattaaaatacaaaac 2181390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 3354755 - 3354821
Alignment:
Q  153 atagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    |||| |||||||||||||||||| | | ||| ||||||||||||| ||||||  ||||||| |||||    
T  3354755 atagcagttttggccccctaagtatcaggaaattgcgattttggcctcctaagaaaataaaatacaa 3354821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 32772081 - 32772019
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||| ||||||||| ||||||||   ||||||||| |||| ||||||||    
T  32772081 ttttggccccctatgtttcaagaagttgtgattttggtcccctaactaattaaaatacaaaac 32772019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 33447272 - 33447210
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||| |||||| ||||||||||||||||||||||| | ||| ||||| |||| || |||||    
T  33447272 ttttggtcccctatgttttaagaagttgcgattttggttccctgactaattaaaatataaaac 33447210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 40988611 - 40988673
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||| ||||| |||| ||||||||||||||||||   ||||||||| |||| ||||||||    
T  40988611 ttttggctccctatgtttcaagaagttgcgattttggtcccctaactaattaaaatacaaaac 40988673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 196
Target Start/End: Original strand, 48348258 - 48348304
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttgg 196  Q
    ||||||| |||||| ||||||||| ||||| ||||||||||||||||    
T  48348258 ttaatagcagttttcgccccctaacttttacgaagttgcgattttgg 48348304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 49002802 - 49002740
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||| |||| ||| ||||||||||||||||||   ||||||||| |||| ||||||||    
T  49002802 ttttggccctctaattttcaagaagttgcgattttggacccctaactaattaaaatacaaaac 49002740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 50380168 - 50380230
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||| ||| ||||||||||||||||||||||||  ||||| ||| |||| || |||||    
T  50380168 ttttggccctctatgttttaagaagttgcgattttggccccctaattaattaaaatataaaac 50380230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 3193100 - 3193047
Alignment:
Q  142 taataggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||| ||||||| ||||||  |||||||| ||| |||||||||||||||||    
T  3193100 taataggcttaatagcagttttcaccccctaactttcaagaagttgcgattttg 3193047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 204
Target Start/End: Complemental strand, 7218473 - 7218412
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaa 204  Q
    |||||||||||||| | |||| ||||||||| ||||   ||||||||||||||||| |||||    
T  7218473 aataggtttaatagcaattttagccccctaatttttttaaagttgcgattttggctccctaa 7218412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 10732462 - 10732381
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||| | | |||||||||| || |||| |||||||||||||||| |   ||||||||| |||| |||||||| ||||    
T  10732462 aggtttaattgcacttttggccccttatgtttcaagaagttgcgattttcgacccctaactaattaaaatacaaaacagccc 10732381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 16883853 - 16883800
Alignment:
Q  142 taataggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||| ||||||||| |||||||||||||||| | |  ||||||||||||||    
T  16883853 taataggcttaatagtatttttggccccctaagtatcagaaagttgcgattttg 16883800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 17773173 - 17773250
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| ||||||||| ||| |  ||||||||||||||||  |||||  ||| |||||||||||| ||||    
T  17773173 ttaatagcagttttcgccccctaactttcactaagttgcgattttggcaccctaaggaaaaaaactacaaaaccgccc 17773250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 19074474 - 19074551
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| ||||||||| ||| |  ||||||||||||||||  |||||  ||| |||||||||||| ||||    
T  19074474 ttaatagcagttttcgccccctaactttcactaagttgcgattttggcaccctaaggaaaaaaactacaaaaccgccc 19074551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 20432193 - 20432270
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| ||||||||| ||||| |||||||||| |||||   |||||  ||| ||||||||||| |||||    
T  20432193 ttaatagcagtttttgccccctaacttttacgaagttgcgactttggtcccctaagaaaaaaaactacaaaaatgccc 20432270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 32770664 - 32770725
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||| |||||| |||| ||||||||||||||||||  ||||||||||  ||| |||||||    
T  32770664 ttttggtcccctatgtttcaagaagttgcgattttggactcctaactaatcaaaatacaaaa 32770725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 33944928 - 33944843
Alignment:
Q  142 taataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| ||||| | | ||||||||| ||| |||| |||||||||||||||||    ||||||||| |||| |||||||| ||||    
T  33944928 taataggcttaattgcacttttggccctctatgtttcaagaagttgcgattttgaacccctaactaattaaaatacaaaacagccc 33944843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 222
Target Start/End: Original strand, 36315803 - 36315864
Alignment:
Q  161 tttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||| ||| |||| ||||||||||||||||||   ||||||||| |||| ||||||||    
T  36315803 tttggcccactatgtttcaagaagttgcgattttggacccctaactaattaaaatacaaaac 36315864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 50420932 - 50420887
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||| |||||||||| ||||||| ||| |||||||||||||||    
T  50420932 ttaatagcagttttggcctcctaagtattatgaagttgcgattttg 50420887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 4474383 - 4474331
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||||||||||| ||||||  || ||||| ||||| |||||||||||||||||    
T  4474383 taggtttaatagcagttttctcctcctaacttttacgaagttgcgattttggc 4474331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 44586100 - 44586020
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| |||||| ||||||||| |||    ||||||||||||||||  |||||  ||| |||||||||||| ||||    
T  44586100 ggtttaatagcagttttagccccctaactttcccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccc 44586020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 6464391 - 6464309
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||||| ||||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  6464391 taggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaactaaataaactacaaaaccgccc 6464309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 227
Target Start/End: Original strand, 20126434 - 20126518
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||| ||||||| ||||||||||||||| |||| ||||||||| ||||||| |  ||||||||||||||||||||||| ||||    
T  20126434 aataggcttaataggagttttggccccctatgtttcaagaagttgtgattttgaccccctaactaaataaactacaaaaccgccc 20126518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 20126736 - 20126652
Alignment:
Q  145 taggtttaatagtagttttggccccc--taagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||||| |||||||||||||  || |||||||||||||||||||||| |  ||||||||||||||||||||||| ||||    
T  20126736 taggcttaataggagttttggccccccctatgttttaagaagttgcgattttgaccccctaactaaataaactacaaaaccgccc 20126652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 36361463 - 36361400
Alignment:
Q  159 gttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||||  |||||||||||||||||||||||  | |||||||||||||||||||||    
T  36361463 gttttggccccctatattttaagaagttgcgattttggccccttaactaaataaactacaaaac 36361400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 7611483 - 7611403
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgc 225  Q
    |||||||||| ||||||||| ||||||| ||||||| ||||||| ||||||||  | ||||||||||||||| || |||||    
T  7611483 taggtttaattgtagttttgaccccctatgttttaaaaagttgcaattttggccccttaactaaataaactataacactgc 7611403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Original strand, 42585982 - 42586048
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    |||||| ||||||| ||||||||||||||| |||| ||||||||||||||||| |  ||||||||||    
T  42585982 aataggcttaatagcagttttggccccctatgtttcaagaagttgcgattttgaccccctaactaaa 42586048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 38163730 - 38163654
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||| | | |||||||| ||||  |||||||||||||||||||||||  ||||||||| |||| ||||||||    
T  38163730 aggtttaattgcacttttggcctcctatattttaagaagttgcgattttggccccctaactaattaaaatacaaaac 38163654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 26702722 - 26702647
Alignment:
Q  152 aatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||| | ||||||| ||||| |||||||||||||||||| | |||  ||| |||||||||||||||||    
T  26702722 aatagtaatttttgtcccctaacttttacgaagttgcgattttggctccttaagaaaaaaaactacaaaactgccc 26702647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 26972455 - 26972380
Alignment:
Q  152 aatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||| | ||||||| ||||| |||||||||||||||||| | |||  ||| |||||||||||||||||    
T  26972455 aatagtaatttttgtcccctaacttttacgaagttgcgattttggctccttaagaaaaaaaactacaaaactgccc 26972380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 36361031 - 36361113
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||| | |||||||| |||||| |||| |||||||||||||||||    |||||||||||||| |||||||| ||||    
T  36361031 taggcttaattgcagttttggtcccctatgtttcaagaagttgcgattttgatcccctaactaaataaagtacaaaaccgccc 36361113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 13428191 - 13428143
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||||||||| |||||||||||||||  |||||||||||||| ||||||    
T  13428191 ggtttaatagcagttttggccccctatattttaagaagttgcaattttg 13428143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 42169084 - 42169132
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||||||||||||||||||||||||| |||  ||||||| ||||||    
T  42169084 ggtttaatagtagttttggccccctaagtattagaaagttgcaattttg 42169132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 227
Target Start/End: Original strand, 7611095 - 7611154
Alignment:
Q  168 ccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||| ||||||||||||||||||||||||  | ||  ||||||||||||||||| ||||    
T  7611095 ccctatgttttaagaagttgcgattttggccccttagttaaataaactacaaaaccgccc 7611154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 26366125 - 26366059
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||| |||| ||||||||| |||||||||  ||||||||| |||| |||||||| ||||    
T  26366125 ttttggccccctatgtttcaagaagttgtgattttggc-ccctaactaattaaaatacaaaacagccc 26366059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 38162606 - 38162673
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||| |||| ||||||||| ||||||||   ||||||||| |||| |||||||| ||||    
T  38162606 ttttggccccctatgtttcaagaagttgtgattttggacccctaactaattaaaatacaaaacagccc 38162673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 42586398 - 42586339
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    ||||||| ||||||||||||| | ||||  ||||||||||||||||||  ||||||||||    
T  42586398 ttaatagcagttttggccccccatgtttacagaagttgcgattttggccccctaactaaa 42586339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 227
Target Start/End: Original strand, 28769716 - 28769793
Alignment:
Q  149 tttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| |||||||||| | ||  |||||| || |||||||||||||| |||||| ||||||| |||||||| ||||    
T  28769716 tttaatagcagttttggccac-tatattttaaaaaattgcgattttggctccctaacaaaataaaatacaaaaccgccc 28769793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 34969200 - 34969162
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttgg 196  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  34969200 agttttggccctctatgttttaagaagttgcgattttgg 34969162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 3999085 - 3999134
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||||||| |||||| ||||||||| ||| | |||||||||||||||    
T  3999085 aggtttaatagcagttttcgccccctaactttcacgaagttgcgattttg 3999134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 222
Target Start/End: Original strand, 24405484 - 24405565
Alignment:
Q  141 ataataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||||| |||||| | ||||||| ||||   |||||||||||||| || ||| |  ||| ||||||||||||    
T  24405484 ataataggtttaatagcagttttagtcccctaactttttcaaagttgcgattttgactccctgagaaaaaaaactacaaaac 24405565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 25693904 - 25693981
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||| ||| |||||||||||||  |||| | ||||||||||||||||   |||||||| |||| |||||||| ||||    
T  25693904 ttaattgtacttttggccccctatcttttcaaaagttgcgattttggccctctaactaattaaaatacaaaacagccc 25693981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 37898028 - 37897951
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| ||||||||| ||||   ||||||||||||||||  |||||  ||| |||||||||||| ||||    
T  37898028 ttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccc 37897951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 195
Target Start/End: Original strand, 43098027 - 43098076
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||||||| |||||| | ||||||| ||||| |||||||||||||||    
T  43098027 aggtttaatagcagttttcgtcccctaacttttacgaagttgcgattttg 43098076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 2974950 - 2974898
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||| ||||||| |||||| ||||||||| ||| | |||||||||||||||||    
T  2974950 taggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggc 2974898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 3334012 - 3333940
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||| ||||||||| ||||   ||||||||||||||||  |||||  | | ||||||||||||    
T  3334012 ttaatagtagttttagccccctaacttttccaaagttgcgattttggccccctaagaagaaaaactacaaaac 3333940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 10169014 - 10169090
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||| | | |||||||||||||  |||| | |||||||||||||||   ||||||||| |||| ||||||||    
T  10169014 aggtttaattgcacttttggccccctatctttttaaaagttgcgattttggtcccctaactaattaaaatacaaaac 10169090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 17235139 - 17235211
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||| ||| |||||||||||||  |||| | ||||||||||||| ||| ||||| ||| |||| ||||||||    
T  17235139 ttaattgtacttttggccccctatcttttcaaaagttgcgattttagctccctaattaactaaaatacaaaac 17235211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 20364680 - 20364748
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaa 213  Q
    |||| ||||||| ||||||| |||||||||| | | ||||||||||||||| |  |||||| |||||||    
T  20364680 taggcttaatagcagttttgtccccctaagtatcaggaagttgcgattttgaccccctaacaaaataaa 20364748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 38974971 - 38974911
Alignment:
Q  167 cccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||| ||||||||||||||||| |||||   ||||||||| |||| |||||||| ||||    
T  38974971 cccctatgttttaagaagttgcgaatttggacccctaactaattaaaatacaaaacagccc 38974911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 222
Target Start/End: Complemental strand, 34116177 - 34116105
Alignment:
Q  149 tttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||||||||||| || || | ||||||||||||||||||||||||||||||||||||||||||||    
T  34116177 tttaatagtagttttggcccc-tatgtatcaagaagttgcgattttggcttcctaactaaataaactacaaaac 34116105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 10691311 - 10691378
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||||||||    
T  10691311 ttttggccccctatgtttcaagaagttgcgattttggccccctaactaaataaactacaaaactgccc 10691378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 7873934 - 7873865
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||| |||| ||||| ||| |||||||||| ||||||||||||||||||||||| ||||    
T  7873934 agttttggccccctatgtttcaagaaattgtgattttggctccctaactaaataaactacaaaaccgccc 7873865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 9477132 - 9477213
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||||||||| ||  | |||| ||||||| |||||||||||||    
T  9477132 aggtttaatagcagttttggccccctatgttttaaaaagttgcgattttagccccttaacaaaataaaatacaaaactgccc 9477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 29933589 - 29933512
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||| ||||||  ||||||| ||| ||| |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  29933589 taggcttaataacagttttgaccctctatgttttaagaagttgcgattttggcctcctaactaaaaaaactacaaaac 29933512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 224
Target Start/End: Complemental strand, 6385863 - 6385785
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactg 224  Q
    ||||||||| | |||||||| |||||| |||||||||| |||| ||||| |  ||||||||||||||||||||||||||    
T  6385863 aggtttaattgcagttttggtcccctatgttttaagaaattgcaattttagtctcctaactaaataaactacaaaactg 6385785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 7873507 - 7873589
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||| | ||||||| ||||||| |||| ||| |||||||||||||||  ||||||||||||||||||||||| ||||    
T  7873507 taggcttaattgcagttttgaccccctatgtttcaaggagttgcgattttggccccctaactaaataaactacaaaaccgccc 7873589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 43078114 - 43078037
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| || |||||||||||  |||| |||||||||||||||||||  ||||| ||||||||||||||||| ||||    
T  43078114 ttaatagcagatttggccccctctgtttcaagaagttgcgattttggccccctaattaaataaactacaaaacagccc 43078037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 43092091 - 43092014
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| || |||||||||||| |||| |||||||| | ||||||||  ||||||||||||||||||||||| ||||    
T  43092091 ttaatagcagatttggccccctatgtttcaagaagttacaattttggccccctaactaaataaactacaaaaccgccc 43092014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 227
Target Start/End: Complemental strand, 10691703 - 10691623
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| | ||||||  ||||||| |||| |||||||| ||||||||||  ||||||||||||||||||||||| ||||    
T  10691703 ggtttaattgcagtttttaccccctatgtttcaagaagttacgattttggccccctaactaaataaactacaaaaccgccc 10691623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 143 - 222
Target Start/End: Original strand, 9142960 - 9143039
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||| |||||||  ||| ||  ||||||||||||||||||||| || | ||| |||||||||||||||||    
T  9142960 aataggtttaatagcagttttgatcccttatattttaagaagttgcgattttgactccataattaaataaactacaaaac 9143039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 282919 - 282853
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    |||||| ||||||| |||||||||| |||| |||| |||||||||||||||||||  ||||||||||    
T  282919 aataggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggccccctaactaaa 282853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 222
Target Start/End: Original strand, 18186432 - 18186514
Alignment:
Q  140 aataataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||| ||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||| |  |||  ||| ||||||||||||    
T  18186432 aatattaggtttaatagtggttttcgccccctaacttttatgaagttgcgattttggccttttaagaaaaaaaactacaaaac 18186514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 26787982 - 26787900
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| |||||||||||||||||||||||  ||| || |||||| |||||| || ||||||| ||||||| |||||||| ||||    
T  26787982 taggcttaatagtagttttggccccctatatttcaaaaagttgtgatttttgcctcctaacaaaataaaatacaaaaccgccc 26787900  T

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Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 26974228 - 26974310
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| | | |||||||||||||  ||| |||||||||||||||||||| | ||||||| |||| |||||||| ||||    
T  26974228 taggtttaattgcacttttggccccctatatttcaagaagttgcgattttggctccttaactaattaaaatacaaaacagccc 26974310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 44565263 - 44565329
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaa 213  Q
    |||||||||||| ||||| |||||||||| ||| |||||||| |||||||| ||||||| |||||||    
T  44565263 ggtttaatagtatttttgaccccctaagtattatgaagttgcaattttggcctcctaacaaaataaa 44565329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 24679147 - 24679078
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||| |||| ||||| |||||||||||||  |||||| ||||||| |||||||| ||||    
T  24679147 agttttggccccctatgtttcaagaaattgcgattttggccccctaacaaaataaaatacaaaacagccc 24679078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 46199051 - 46199128
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||| ||||||| ||||||| ||| |||  ||||||||||||||||||||||   ||||| |||||||||||||||||    
T  46199051 taggcttaatagcagttttgcccctctatattttaagaagttgcgattttggtcccctaaataaataaactacaaaac 46199128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 327494 - 327430
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    |||| ||||||| |||| |||||||||| |||| |||||||||||||||||||  ||||||||||    
T  327494 taggcttaatagcagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 327430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 9477501 - 9477430
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    ||||||| ||||||| || |||| ||||||| ||||||||||||||||  |||||| ||||||| |||||||    
T  9477501 ttaatagcagttttgacctcctatgttttaaaaagttgcgattttggccccctaacaaaataaaatacaaaa 9477430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 196
Target Start/End: Complemental strand, 9500213 - 9500167
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttgg 196  Q
    ||||||| |||||| ||||||||||||| ||||||||||||||||||    
T  9500213 ttaatagcagttttagccccctaagtttcaagaagttgcgattttgg 9500167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 219
Target Start/End: Complemental strand, 24432709 - 24432637
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    ||||||||||| |||||||||||| ||||| || || ||||||||||||||||  ||||| ||||||| |||||    
T  24432709 aggtttaatagcagttttggccccttaagtatt-aggagttgcgattttggctcactaacaaaataaaatacaa 24432637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 27756268 - 27756337
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    ||||||| |||||||||||| ||||| ||| | |||||||||||||||  |||||| ||||||| |||||    
T  27756268 ttaatagcagttttggccccttaagtattaggtagttgcgattttggccccctaacaaaataaaatacaa 27756337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 29933193 - 29933270
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| ||||||| || |||| |||| |||||||||||||||||||   |||| ||||||||||| ||||| ||||    
T  29933193 ttaatagcagttttgacctcctatgtttcaagaagttgcgattttggccctctaattaaataaactataaaaccgccc 29933270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 35793378 - 35793447
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||| |   |||||| ||||||| |||||    
T  35793378 ttaatagcagttttggccccctaaattttaggaagttgcgattttaggcccctaacaaaataaaatacaa 35793447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 48059257 - 48059180
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| | ||||||||||||||||||||| |||||||||  || ||  ||| |||||||||||| ||||    
T  48059257 ttaatagcagttttaggcccctaagttttaagaagttgtgattttggcaccccaagaaaaaaaactacaaaaccgccc 48059180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 21939390 - 21939338
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    |||| ||||||| |||||||||||||||||| | | |||||||||||||||||    
T  21939390 taggcttaatagcagttttggccccctaagtatcacgaagttgcgattttggc 21939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 8409372 - 8409305
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| ||||  |||| | |||||||||||||||| | ||||||||||||| |||||||| ||||    
T  8409372 ttttggcctcctatctttttaaaagttgcgattttggccttctaactaaataaaatacaaaacagccc 8409305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 42436842 - 42436909
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||| ||||||||||||| |||||||||   ||||||||| | || |||||||| ||||    
T  42436842 ttttggccccctatgttttaagaagttacgattttggacccctaactaattgaaatacaaaacagccc 42436909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 221
Target Start/End: Complemental strand, 42438091 - 42438016
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    ||||||||| | | ||||||||| |||  ||| |||||||||||||||||||  ||||||||| |||| |||||||    
T  42438091 aggtttaattgcacttttggccctctatatttcaagaagttgcgattttggccccctaactaattaaaatacaaaa 42438016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 147 - 222
Target Start/End: Original strand, 46265865 - 46265939
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||| ||||||  |||| ||||||||||||||||| |||||||||  |||||  ||| ||||||||||||    
T  46265865 ggtttaatagcagttttaaccccttaagttttaagaagttgggattttggccccctaa-gaaaaaaactacaaaac 46265939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 6792112 - 6792030
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||| |||||| ||||||||| ||||   |||||||||||||||   |||||  ||| |||||||||||| ||||    
T  6792112 taggtttaatagcagttttagccccctaacttttccaaagttgcgattttggtcccctaagaaaaaaaactacaaaaccgccc 6792030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 20185226 - 20185181
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||||||||||||| ||||||||| ||| | |||||||||||||||    
T  20185226 ttaatagtagttttcgccccctaactttcacgaagttgcgattttg 20185181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 218
Target Start/End: Original strand, 24432334 - 24432407
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactaca 218  Q
    |||| ||||||| | ||||| ||| |||||| | |||||||||||||||||||| |||||  ||||||| ||||    
T  24432334 taggcttaatagcaattttgacccactaagtatcaagaagttgcgattttggctccctaaaaaaataaaataca 24432407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 28350119 - 28350196
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| ||||||||| ||| | |||||| ||||||||||  |||||  ||| |||||||||||| ||||    
T  28350119 ttaatagcagttttagccccctaactttcacgaagttacgattttggccccctaagaaaaaaaactacaaaaccgccc 28350196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 36801916 - 36801839
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||| | | |||||||||||||  |||| | |||||| |||||| || |||||||||| |||| ||||||||    
T  36801916 taggtttaattgcacttttggccccctatcttttcaaaagttgtgattttagcctcctaactaattaaaatacaaaac 36801839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 47909590 - 47909643
Alignment:
Q  142 taataggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||||||||||  ||||||  |||||||||||| ||| |||||||||||||    
T  47909590 taataggtttaataacagttttaaccccctaagtttcaaggagttgcgattttg 47909643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 227
Target Start/End: Complemental strand, 21505927 - 21505851
Alignment:
Q  151 taatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||| |||||| | ||||||| ||||   ||||||||||||||||  |||||  ||| |||||||||||||||||    
T  21505927 taatagcagttttagtcccctaactttttcaaagttgcgattttggccccctaagaaaaaaaactacaaaactgccc 21505851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 30505175 - 30505115
Alignment:
Q  167 cccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||| |||| |||||||||||||||||   |||||||||| |||| |||||||| ||||    
T  30505175 cccctatgtttcaagaagttgcgattttgtactcctaactaattaaaatacaaaacagccc 30505115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 43091668 - 43091740
Alignment:
Q  150 ttaatagtagttttggcccc-ctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    ||||||| | |||||||||| ||| ||||||||||||||||||||| |   ||||| ||| ||||||||||||    
T  43091668 ttaatagcaattttggcccctctatgttttaagaagttgcgattttagtcacctaattaattaaactacaaaa 43091740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 44135604 - 44135548
Alignment:
Q  165 gccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    ||||| || |||||||||||||| ||||||||| |||||| ||| |||| |||||||    
T  44135604 gccccttatgttttaagaagttgtgattttggcatcctaattaattaaaatacaaaa 44135548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 222
Target Start/End: Complemental strand, 46266564 - 46266492
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||| |||||| || |||||||||| |||||||||| |||||| |  |||||  ||| ||||||||||||    
T  46266564 ttaatagcagttttagctccctaagtttcaagaagttgcaattttgcccccctaagaaaaaaaactacaaaac 46266492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 37008220 - 37008296
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgcc 226  Q
    ||||||| ||||||||||||||| |||| |||||||||||||||||||  |||||| ||||||| ||||||||||||    
T  37008220 ttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaacaaaataaaatacaaaactgcc 37008296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 7197029 - 7196951
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||| ||||||| ||||| | |||| || |||||||||||||||||||||| || ||||||||||||||||||||||    
T  7197029 aataggcttaatagcagtttcgaccccttatgttttaagaagttgcgattttgactccctaactaaataaactacaaaa 7196951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 7196679 - 7196756
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| ||||||| ||| |||  ||| ||||||||||||||||||| | |||||||||||||||||||||||||||    
T  7196679 ttaatagcagttttgaccctctatatttcaagaagttgcgattttggcctgctaactaaataaactacaaaactgccc 7196756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 40877048 - 40876979
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||| |||  |||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  40877048 agttttggccccctatgttccaagaagttgcgattttggccccctaactaaataaactacaaaaccgccc 40876979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 142 - 227
Target Start/End: Complemental strand, 51549459 - 51549374
Alignment:
Q  142 taataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| ||||| | | |||||||||||||||||| ||||||||||||||||||   ||||||||| |||| |||||||| ||||    
T  51549459 taataggcttaattgcaattttggccccctaagtttcaagaagttgcgattttggacccctaactaattaaaatacaaaacagccc 51549374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 6129255 - 6129319
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||| ||||||  |||||||||||||| ||||||||| ||||| |||||||||||||||||    
T  6129255 agttttggtcccctatattttaagaagttgcaattttggctccctaattaaataaactacaaaac 6129319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 6129661 - 6129601
Alignment:
Q  166 ccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgcc 226  Q
    ||||||| ||||||||| ||||||||||| ||  |||||||||||||||||||||||||||    
T  6129661 ccccctatgttttaagatgttgcgatttttgccccctaactaaataaactacaaaactgcc 6129601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 50503714 - 50503781
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||| |||||| ||||||||||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  50503714 ttttggtcccctatgttttaagaagttgcgattttggccccctaactaattaaaatacaaaacagccc 50503781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 224
Target Start/End: Original strand, 46895440 - 46895514
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactg 224  Q
    ||||||| |||||||||||||||  ||| |||||||||||||||||     ||||||||||||||||||||||||    
T  46895440 ttaatagcagttttggccccctatatttcaagaagttgcgattttgatcctctaactaaataaactacaaaactg 46895514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 140 - 213
Target Start/End: Complemental strand, 6912501 - 6912428
Alignment:
Q  140 aataataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaa 213  Q
    ||||||||||||||| | | |||||||||||||  |||| | |||||||||||||||| |||||||||| ||||    
T  6912501 aataataggtttaattgcacttttggccccctatcttttgaaaagttgcgattttggcctcctaactaattaaa 6912428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 46895843 - 46895774
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||| |||| ||||||||||||||||| |  | |||||||||||| |||||||| ||||    
T  46895843 agttttggccccctatgtttcaagaagttgcgattttgaccccataactaaataaattacaaaaccgccc 46895774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 45719751 - 45719688
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||| || |||| ||||||||||||||||||||| ||  |||||||||||||||||||||||    
T  45719751 agttttgacctcctatgttttaagaagttgcgattttagc-ccctaactaaataaactacaaaac 45719688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 227
Target Start/End: Original strand, 3814757 - 3814839
Alignment:
Q  144 ataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||| ||||||| || ||| |||||||| |||| ||||||||| |||||||||  ||||||||| ||||||||||||| ||||    
T  3814757 ataggcttaatagcagatttagccccctatgtttcaagaagttgtgattttggccccctaactaa-taaactacaaaaccgccc 3814839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 12075324 - 12075265
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||||||||  ||||||||||    
T  12075324 ttaatagcagttttggccccctatgtttacagaagttgcgattttggccccctaactaaa 12075265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 35580969 - 35580902
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||||  |||| | |||||||||||||||| |||||||||| |||| |||||||| ||||    
T  35580969 ttttggccccctattttttcaaaagttgcgattttggcctcctaactaattaaaatacaaaacagccc 35580902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 40345631 - 40345564
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| | || ||||||| |||||||||||||||| || |||| ||||||| |||||||||||||    
T  40345631 ttttggcctcttatgttttaaaaagttgcgattttggcctcataacaaaataaaatacaaaactgccc 40345564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 209
Target Start/End: Complemental strand, 3815114 - 3815048
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    |||||| ||||||| |||||||  |||||| |||| |||||||||||||||||||  ||||||||||    
T  3815114 aataggcttaatagcagttttgaacccctatgtttcaagaagttgcgattttggccccctaactaaa 3815048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 4474768 - 4474830
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| ||||||||||||||| ||||| | | ||||||||| |||| ||||||||    
T  4474768 ttttggccccctatgttttaagaagttgcaattttagatccctaactaattaaaatacaaaac 4474830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 21258932 - 21258994
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||| || |||| |||||||||||||||||||||||  |||||||||| |||| ||||||||    
T  21258932 ttttgaccacctatgttttaagaagttgcgattttggactcctaactaattaaaatacaaaac 21258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 50504851 - 50504789
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||| ||||||| |||||||||||||||||||||||   ||||||||| |||| ||||||||    
T  50504851 ttttgaccccctatgttttaagaagttgcgattttggacccctaactaattaaaatacaaaac 50504789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 7058424 - 7058363
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    ||||||||||||| |||| ||||||||||||||||||   ||||||||| |||| |||||||    
T  7058424 ttttggccccctatgtttcaagaagttgcgattttggacccctaactaagtaaaatacaaaa 7058363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 10231179 - 10231118
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    |||||||||||||||||| |||||||||| ||||||||||   ||||| ||||||| |||||    
T  10231179 agttttggccccctaagtattaagaagtttcgattttggccctctaacaaaataaaatacaa 10231118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 39642203 - 39642280
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| ||||||||| ||| | |||||||||||||||||   |||| |||| |||||||||||| ||||    
T  39642203 ttaatagcagttttcgccccctaactttcacgaagttgcgattttggccctctaaataaaaaaactacaaaaccgccc 39642280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 41915838 - 41915761
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||| ||||||| |||||||| ||||||  ||| |||||||||||||||||    ||||| |||||||||||||||||    
T  41915838 taggcttaatagcagttttggtcccctatatttcaagaagttgcgattttgatcccctaaataaataaactacaaaac 41915761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 222
Target Start/End: Original strand, 43117257 - 43117330
Alignment:
Q  149 tttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||| |||||| ||| |||| |||| ||||||||||||||||||    |||| |||||||||||||||||    
T  43117257 tttaatagcagttttagccacctatgtttcaagaagttgcgattttggtcctctaaataaataaactacaaaac 43117330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 222
Target Start/End: Original strand, 15788437 - 15788485
Alignment:
Q  174 gttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||| ||||||||||||| |||||  |||||||||||||||||||||||    
T  15788437 gtttcaagaagttgcgatattggccccctaactaaataaactacaaaac 15788485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 23953160 - 23953116
Alignment:
Q  151 taatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||||| ||||||||||||||| |||| |||||||||||||||||    
T  23953160 taatagcagttttggccccctatgtttcaagaagttgcgattttg 23953116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 40876711 - 40876775
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||| |||||||  ||| ||||||||| |||||| ||  |||||||||||||||||||||||    
T  40876711 agttttgaccccctatatttcaagaagttgtgattttagccacctaactaaataaactacaaaac 40876775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 12074959 - 12075018
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    ||||||| ||||||||| ||||| |||| ||||||||||||||||| |  ||||||||||    
T  12074959 ttaatagcagttttggctccctatgtttcaagaagttgcgattttgaccccctaactaaa 12075018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 18632650 - 18632603
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    ||||||| |||||| ||||||||| ||||| |||||||||||||||||    
T  18632650 ttaatagcagttttcgccccctaacttttacgaagttgcgattttggc 18632603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 29816487 - 29816436
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttgg 196  Q
    |||||||||||||||||||| |||| ||| | | ||||||||||||||||||    
T  29816487 taggtttaatagtagttttgaccccttaaatatcaagaagttgcgattttgg 29816436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 50877859 - 50877796
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||| ||||| |||| |||||||||||||||||| |||||  ||||||||| |||| |||||||    
T  50877859 agttctggccacctatgttttaagaagttgcgatattggccccctaactaattaaaatacaaaa 50877796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 367237 - 367159
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||| ||||||| |||||||  ||||||  ||| |||| ||||||||||||||  |||||| ||||||| |||||||    
T  367237 aataggcttaatagcagttttgatcccctatatttcaagaggttgcgattttggccccctaacaaaataaaatacaaaa 367159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 4476242 - 4476180
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||| |||  |||||||||||||||||||||||  ||||| ||| |||| ||||||||    
T  4476242 ttttggccctctatattttaagaagttgcgattttggccccctaattaattaaaatacaaaac 4476180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 10532213 - 10532263
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||| ||||||| ||||||| |||||||||| ||| |||||||||||||||    
T  10532213 taggcttaatagcagttttgaccccctaagtattaggaagttgcgattttg 10532263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 26811466 - 26811528
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||| |||||||  |||| | |||||||||||||||| |||||||||| |||| ||||||||    
T  26811466 ttttgaccccctatcttttcaaaagttgcgattttggcctcctaactaattaaaatacaaaac 26811528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 39384643 - 39384569
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    |||| |||| ||||||||||| ||||||||| | | |||||||||| |||||| ||||||  ||||||| |||||    
T  39384643 taggcttaacagtagttttggtcccctaagtatcaggaagttgcgaatttggcctcctaataaaataaaatacaa 39384569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 46038898 - 46038980
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||| | | |||||||||||||  |||| | ||||| ||||||||||  ||||||||| |||| |||||||| ||||    
T  46038898 taggtttaattgcacttttggccccctatcttttcaaaagttacgattttggccccctaactaattaaaatacaaaacagccc 46038980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 1484742 - 1484689
Alignment:
Q  142 taataggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||| |||||||||| ||||||||||| |||||| ||| ||||||| |||||||    
T  1484742 taattggtttaatagcagttttggccctctaagtattaggaagttgtgattttg 1484689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 3377504 - 3377581
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||| ||||||||| ||||   ||||||||||||||||  |||||  ||| |||||||||||| ||||    
T  3377504 ttaatagcagttttagccccctaacttttccaaagttgcgattttggccccctaagaaaaaaaactacaaaaccgccc 3377581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 6607014 - 6606933
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||| ||| ||||| |||| ||  |||| | ||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  6607014 aggtttaattgtacttttgaccccttattttttcaaaagttgcgattttggccccctaactaattaaaatacaaaacagccc 6606933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 13344491 - 13344414
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||| | | |||||||||||||  |||| | |||||||||||||||   ||||||||| |||| ||||||||    
T  13344491 taggtttaattgcacttttggccccctattttttcaaaagttgcgattttggtcccctaactaattaaaatacaaaac 13344414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 366889 - 366925
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagtt 186  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  366889 ttaatagcagttttggccccctatgttttaagaagtt 366925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Original strand, 3612124 - 3612152
Alignment:
Q  167 cccctaagttttaagaagttgcgattttg 195  Q
    |||||||||||||||||||||||||||||    
T  3612124 cccctaagttttaagaagttgcgattttg 3612152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Complemental strand, 44743787 - 44743735
Alignment:
Q  143 aataggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||||||||||||  ||||||||||||| | ||||  ||||||||||||||||    
T  44743787 aataggtttaatatcagttttggcccccaatgtttccagaagttgcgattttg 44743735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Original strand, 46880738 - 46880786
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    |||||||||| |||||| || |||||| ||||| |||||||||||||||    
T  46880738 ggtttaatagcagttttcgctccctaatttttacgaagttgcgattttg 46880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 49695378 - 49695430
Alignment:
Q  175 ttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||||||||||||||  ||||| ||| |||| |||||||| ||||    
T  49695378 ttttaagaagttgcgattttggccccctaattaattaaaatacaaaacagccc 49695430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 50401686 - 50401634
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggct 198  Q
    ||||||||||| |||||| ||||| ||| ||||  ||||||||||||||||||    
T  50401686 aggtttaatagcagttttcgccccttaattttttcgaagttgcgattttggct 50401634  T

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Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 45163761 - 45163694
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||| |||| |||||||||||||||||||  ||||||||||||||||||||||| ||||    
T  45163761 ttttggccccctatgtttcaagaagttgcgattttggccccctaactaaataaactacaaaaccgccc 45163694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 12278838 - 12278915
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||| ||| ||||||||||||| ||||||||||||||||||||||| | ||||||||| |||| |||||||| ||||    
T  12278838 ttaattgtacttttggccccctatgttttaagaagttgcgattttggatccctaactaattaaaatacaaaacagccc 12278915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 27225780 - 27225860
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||| | ||||||| ||||||| ||||||||||||||||||||| | | ||||||||||||||||||||||| ||||    
T  27225780 aggtttaattgcagttttgaccccctatgttttaagaagttgcgatttt-gatccctaactaaataaactacaaaaccgccc 27225860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 14170433 - 14170497
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||| ||||||| ||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  14170433 agttttgaccccctatgttttaagaagttgcgattttggccccctaattaaataaactacaaaac 14170497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 158 - 222
Target Start/End: Complemental strand, 35795634 - 35795570
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||||| |||| ||||||||| |||||||||  |||||||||||||||||||||||    
T  35795634 agttttggccccctatgtttcaagaagttgtgattttggccccctaactaaataaactacaaaac 35795570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 17512108 - 17512171
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||||||||||||  ||| |||||||||||||||||||  ||||||||||||||||||||||    
T  17512108 agttttggccccctatatttcaagaagttgcgattttggccccctaactaaataaactacaaaa 17512171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 1003458 - 1003538
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||| |||||||||| ||||  |||||||||||||||||||||||  | ||||||||||| |||||||| |||||    
T  1003458 ggttcaatagcagttttggcctcctatattttaagaagttgcgattttggccccataactaaataagctacaaaattgccc 1003538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 1003841 - 1003785
Alignment:
Q  165 gccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||    
T  1003841 gccccctatgtttcaagaagttgcaattttggctccctaactaaataaactacaaaa 1003785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 23936292 - 23936354
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||| |||||||||||||||||||  ||||||||| |||| ||||||||    
T  23936292 ttttggccccctatgtttcaagaagttgcgattttggccccctaactaattaaaatacaaaac 23936354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 41602927 - 41602845
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| ||||||| |||||| ||||||||||||| || ||||||||||||| || ||||||  ||| |||||||||||| ||||    
T  41602927 taggcttaatagcagttttagccccctaagtttcaaaaagttgcgattttagcctcctaagaaaaaaaactacaaaaccgccc 41602845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 145 - 227
Target Start/End: Complemental strand, 45522507 - 45522425
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||| |||| || ||||||| ||||||| ||||||||||||||||||||| ||  |||||| ||||||| |||||||| ||||    
T  45522507 taggcttaaaagcagttttgaccccctatgttttaagaagttgcgattttagccccctaacaaaataaaatacaaaaccgccc 45522425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 756174 - 756121
Alignment:
Q  144 ataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    ||||| ||||||| ||||||||| ||||| ||||||||||||||||||||||||    
T  756174 ataggcttaatagcagttttggctccctatgttttaagaagttgcgattttggc 756121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 23475635 - 23475704
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||| |||| ||||||||| ||||||| |  | ||||||||||||||||||||| ||||    
T  23475635 agttttggccccctatgtttcaagaagttgtgattttgaccccttaactaaataaactacaaaaccgccc 23475704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 227
Target Start/End: Original strand, 29340767 - 29340848
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||| ||||||||||||||| |||| || || |||||||||||||  | |||| ||||||| |||||||| ||||    
T  29340767 aggtttaatagcagttttggccccctatgtttaaataatttgcgattttggccccttaacaaaataaaatacaaaaccgccc 29340848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 755906 - 755965
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaa 209  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||||||  ||||||||||    
T  755906 ttaatagcagttttggccctctatgtttcaagaagttgcgattttggccccctaactaaa 755965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 2802646 - 2802697
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttgg 196  Q
    |||||||||||| ||||||| ||||||| || ||||||||||||||||||||    
T  2802646 taggtttaatagcagttttgaccccctatgtattaagaagttgcgattttgg 2802697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 5916957 - 5916890
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||| ||| ||||||||||||||||||||| ||  ||||||||| |||| |||||||| ||||    
T  5916957 ttttggccctctatgttttaagaagttgcgatttttgccccctaactaattaaaatacaaaacagccc 5916890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 227
Target Start/End: Original strand, 25896991 - 25897070
Alignment:
Q  148 gtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||| |||||| ||||||||| ||||   ||||||||||||||||  |||||| ||| |||||||||||| ||||    
T  25896991 gtttaatagcagttttagccccctaactttttcaaagttgcgattttggccccctaacaaaaaaaactacaaaaccgccc 25897070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 221
Target Start/End: Complemental strand, 14170751 - 14170677
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||||| |||||||||||||||||  ||| ||||||||| |||||| ||   |||| ||||||||||||||||    
T  14170751 ggtttaattgtagttttggccccctatatttcaagaagttgagattttagccctctaattaaataaactacaaaa 14170677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 213
Target Start/End: Original strand, 34539184 - 34539249
Alignment:
Q  147 ggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaa 213  Q
    |||||||||||||||| ||| ||||| ||||| |||||||||||||||| |  ||||||||||||||    
T  34539184 ggtttaatagtagtttaggctccctatgttttcagaagttgcgattttgac-ccctaactaaataaa 34539249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 6041512 - 6041463
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||||||||| ||||||||||||| ||||  ||||||||||||||||    
T  6041512 aggtttaatagtatttttggccccctatgtttatagaagttgcgattttg 6041463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 6045149 - 6045100
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||||||||| ||||||||||||| ||||  ||||||||||||||||    
T  6045149 aggtttaatagtatttttggccccctatgtttatagaagttgcgattttg 6045100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Complemental strand, 9499268 - 9499223
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||| |||||||||||||||||| ||| |||||||||||||||    
T  9499268 ttaatagcagttttggccccctaagtattacgaagttgcgattttg 9499223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 227
Target Start/End: Original strand, 35795228 - 35795297
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||||| |||| || ||||||| |||||| |  |||| |||||||||||||||||| ||||    
T  35795228 agttttggccccctatgtttcaaaaagttgcaattttgaccccctagctaaataaactacaaaaccgccc 35795297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 42217812 - 42217865
Alignment:
Q  144 ataggtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    ||||||||||||| |||||| || |  |||||||||||||||||||||||||||    
T  42217812 ataggtttaatagcagttttagctctttaagttttaagaagttgcgattttggc 42217865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 222
Target Start/End: Original strand, 18092914 - 18092985
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||| |||||| ||||||||||||  ||||||||||||||||||| || |||  ||| ||||||||||||    
T  18092914 ttaatagcagttttagccccctaagttacaagaagttgcgattttggcctcgtaa-gaaaaaaactacaaaac 18092985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 8347564 - 8347631
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||| |||| |||||||||||||| ||||||||   ||||||||| |||| |||||||| ||||    
T  8347564 ttttggcctcctatgttttaagaagttgtgattttggacccctaactaattaaaatacaaaacagccc 8347631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 29196678 - 29196631
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgatt 192  Q
    |||||||||||  |||||||||||||||  ||||||||||||||||||    
T  29196678 taggtttaataacagttttggccccctatattttaagaagttgcgatt 29196631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 45308467 - 45308534
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||||||| |||| |||||||||||||||||    ||||||||| |||| |||||||| ||||    
T  45308467 ttttggccccctatgtttcaagaagttgcgattttgaacccctaactaattaaaatacaaaacagccc 45308534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 31947867 - 31947929
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||  |||| | ||||||||||||||||  ||||||||| |||| ||||||||    
T  31947867 ttttggccccctatcttttcaaaagttgcgattttggccccctaactaattaaaatacaaaac 31947929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Original strand, 37263357 - 37263415
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaa 204  Q
    ||||||||||| |||||| ||||| ||| ||||| ||||||||||||||| || |||||    
T  37263357 aggtttaatagcagttttcgccccttaacttttacgaagttgcgattttgactccctaa 37263415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 8409852 - 8409799
Alignment:
Q  174 gttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||||||||||||||   |||||| ||||||| |||||||| ||||    
T  8409852 gttttaagaagttgcgattttgggcccctaacaaaataaaatacaaaaccgccc 8409799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 197
Target Start/End: Original strand, 18650944 - 18650981
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggc 197  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  18650944 ttttggccccctatgtttcaagaagttgcgattttggc 18650981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 12280388 - 12280340
Alignment:
Q  174 gttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||||||||||||||  ||||| ||| |||| ||||||||    
T  12280388 gttttaagaagttgcgattttggccccctaattaattaaaatacaaaac 12280340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 18621756 - 18621796
Alignment:
Q  182 aagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||||||| ||||||||| |||| ||||||||    
T  18621756 aagttgcgattttggctccctaactaattaaaatacaaaac 18621796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 10354 - 10431
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||||||| |||| |||||||||| |||| ||||||||  ||||||||||||||||||||||| ||||    
T  10354 ttaatagcagttttggcctcctatgttttaagaaattgcaattttggccccctaactaaataaactacaaaaccgccc 10431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 3428 - 3366
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||| |||| ||||||||||||||||||||||||  ||||||||| |||| ||||||||    
T  3428 ttttggcctcctatgttttaagaagttgcgattttggccccctaactaattaaaatacaaaac 3366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000001; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 227
Target Start/End: Original strand, 12798730 - 12798806
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||| |||||||||||||||  ||| |||||||||||||||| || ||||||| ||||||| |||||||| ||||    
T  12798730 ttaatagcagttttggccccctatatttcaagaagttgcgatttttgc-tcctaacaaaataaaatacaaaaccgccc 12798806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 222
Target Start/End: Original strand, 12203891 - 12203967
Alignment:
Q  146 aggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||| | | ||||||||||||| |||| ||||||||||||||||| |  ||||||||| |||| ||||||||    
T  12203891 aggtttaattgcacttttggccccctatgtttcaagaagttgcgattttgaccccctaactaattaaaatacaaaac 12203967  T

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Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 221
Target Start/End: Original strand, 2538986 - 2539056
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaa 221  Q
    |||||||||||||||| |||||| ||||||| |||||||||||||| |  |||||| ||||||| |||||||    
T  2538986 ttaatagtagttttggtcccctatgttttaaaaagttgcgattttgac-ccctaacaaaataaaatacaaaa 2539056  T

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Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 10582180 - 10582137
Alignment:
Q  179 aagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||||||||  |||||||||||||||||||||||    
T  10582180 aagaagttgcgattttggccccctaactaaataaactacaaaac 10582137  T

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Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 11623172 - 11623239
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||||||| ||| |||| |||||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  11623172 ttttggccctctatgtttcaagaagttgcgattttggccccctaactaattaaaatacaaaacagccc 11623239  T

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Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 204
Target Start/End: Original strand, 5003100 - 5003146
Alignment:
Q  158 agttttggccccctaagttttaagaagttgcgattttggcttcctaa 204  Q
    |||||| ||||||||| ||||||||||||||||||||| ||||||||    
T  5003100 agttttcgccccctaacttttaagaagttgcgattttgacttcctaa 5003146  T

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Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 28574607 - 28574545
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||| |||||||||||||||||||  ||||||||| |||| || |||||    
T  28574607 ttttggccccctatgtttcaagaagttgcgattttggccccctaactaattaaaatataaaac 28574545  T

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Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 12799108 - 12799031
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||| |||||| |||| |||  ||| ||||||||||||||||||   |||||| ||||||| ||||||||    
T  12799108 taggtttaatagcagttttagccctctatatttcaagaagttgcgattttggtcacctaacaaaataaaatacaaaac 12799031  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 195
Target Start/End: Original strand, 30369787 - 30369832
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttg 195  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||    
T  30369787 ttaatagcagttttggccccttatgttttaagaagttgcgattttg 30369832  T

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Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 2017185 - 2017252
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||| ||||||||||| ||||||||| ||||||||   ||||||||| |||| |||||||| ||||    
T  2017185 ttttggtcccctaagtttcaagaagttgtgattttggacccctaactaattaaaatacaaaacagccc 2017252  T

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Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 33401364 - 33401292
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactg 224  Q
    ||||||| ||||||  |||||||| ||||| |||||| ||||||||||| |||||  ||| ||||||||||||||    
T  33401364 ttaatagcagttttcaccccctaacttttacgaagttacgattttggctccctaa--aaaaaaactacaaaactg 33401292  T

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Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 2173920 - 2173858
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||| ||||||| ||||||||| || ||| ||||| |||| ||||||||    
T  2173920 ttttggccccctatgtttcaagaagtagcgattttgactcccttactaattaaaatacaaaac 2173858  T

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Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 4037051 - 4037113
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||  |||| | ||||||||||||||||  ||||||||| |||| ||||||||    
T  4037051 ttttggccccctatcttttcaaaagttgcgattttggccccctaactaattaaaatacaaaac 4037113  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 2164768 - 2164699
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    ||||||| |||||||||||||| ||| | | ||||||||||||||| |  |||||| ||||||| |||||    
T  2164768 ttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaa 2164699  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 2176401 - 2176332
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    ||||||| |||||||||||||| ||| | | ||||||||||||||| |  |||||| ||||||| |||||    
T  2176401 ttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaa 2176332  T

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Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 197
Target Start/End: Complemental strand, 7504935 - 7504886
Alignment:
Q  148 gtttaatagtagttttggccccctaagttttaagaagttgcgattttggc 197  Q
    ||||||||| |||||||||||||||  ||| |||||||||| ||||||||    
T  7504935 gtttaatagcagttttggccccctatatttcaagaagttgcaattttggc 7504886  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 9070180 - 9070136
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgatttt 194  Q
    ||||||| | ||||||||||||| |||| ||||||||||||||||    
T  9070180 ttaatagcatttttggccccctatgtttcaagaagttgcgatttt 9070136  T

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Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 31001350 - 31001275
Alignment:
Q  149 tttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgc 225  Q
    |||||||  ||||||||| ||||| |||||||||||||  |||||||||  |||||| || |||| |||||||||||    
T  31001350 tttaataacagttttggctccctatgttttaagaagttaagattttggc-ccctaacaaagtaaaatacaaaactgc 31001275  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 122630 - 122563
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||||||||||  |||  | |||||||||||||||| |||||||||| |||| |||||||| ||||    
T  122630 ttttggccccctatctttccaaaagttgcgattttggcctcctaactaattaaaatacaaaacagccc 122563  T

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Target: scaffold0286 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 20121 - 20183
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    ||||||||||||| |||| ||||||| ||||||||| || ||| ||||| |||| ||||||||    
T  20121 ttttggccccctatgtttcaagaagtagcgattttgactcccttactaattaaaatacaaaac 20183  T

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Target: scaffold0286; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 17641 - 17710
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaa 219  Q
    ||||||| |||||||||||||| ||| | | ||||||||||||||| |  |||||| ||||||| |||||    
T  17641 ttaatagcagttttggccccctgagtatcaggaagttgcgattttgacaccctaacaaaataaaatacaa 17710  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 201294 - 201232
Alignment:
Q  160 ttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaac 222  Q
    |||||||||||||  || ||||||||||||||||| ||  ||||||||| |||| ||||||||    
T  201294 ttttggccccctatattataagaagttgcgattttagccccctaactaattaaaatacaaaac 201232  T

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Target: scaffold0725 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 194
Target Start/End: Complemental strand, 6747 - 6698
Alignment:
Q  145 taggtttaatagtagttttggccccctaagttttaagaagttgcgatttt 194  Q
    |||| ||||||| |||||| ||||||||||||| || |||||||||||||    
T  6747 taggcttaatagcagttttagccccctaagtttcaacaagttgcgatttt 6698  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 227
Target Start/End: Complemental strand, 32320 - 32243
Alignment:
Q  150 ttaatagtagttttggccccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    ||||| ||| |||||||||||||  |||  | ||||||||||||||||  ||||||||| |||| |||||||| ||||    
T  32320 ttaattgtacttttggccccctatctttccaaaagttgcgattttggccccctaactaattaaaatacaaaacagccc 32243  T

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Target: scaffold0182 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 21185 - 21245
Alignment:
Q  167 cccctaagttttaagaagttgcgattttggcttcctaactaaataaactacaaaactgccc 227  Q
    |||||| |||| ||||| |||  |||||||  ||||||||||||||||||||||| |||||    
T  21185 cccctatgtttcaagaaattgtaattttggtctcctaactaaataaactacaaaattgccc 21245  T

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