View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19183_low_5 (Length: 413)

Name: NF19183_low_5
Description: NF19183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19183_low_5
NF19183_low_5
[»] chr6 (54 HSPs)
chr6 (20-399)||(26800521-26800900)
chr6 (129-396)||(22424682-22424952)
chr6 (129-399)||(17758066-17758337)
chr6 (129-399)||(3808559-3808834)
chr6 (129-397)||(17763033-17763302)
chr6 (129-374)||(21588974-21589218)
chr6 (129-397)||(5043670-5043939)
chr6 (129-399)||(2972791-2973064)
chr6 (129-396)||(26829979-26830248)
chr6 (129-278)||(21593707-21593855)
chr6 (129-247)||(26954294-26954411)
chr6 (129-336)||(603003-603213)
chr6 (129-263)||(28137400-28137533)
chr6 (141-245)||(5413403-5413507)
chr6 (135-245)||(9183041-9183150)
chr6 (141-230)||(5406224-5406313)
chr6 (141-230)||(5410549-5410638)
chr6 (141-254)||(31404675-31404788)
chr6 (129-245)||(33211195-33211310)
chr6 (162-245)||(5409078-5409162)
chr6 (141-254)||(2171532-2171644)
chr6 (19-133)||(5043377-5043491)
chr6 (141-245)||(30834545-30834649)
chr6 (141-225)||(33160381-33160465)
chr6 (144-254)||(412158-412270)
chr6 (144-254)||(3072759-3072871)
chr6 (19-133)||(603384-603499)
chr6 (19-133)||(21593415-21593530)
chr6 (129-230)||(3038927-3039028)
chr6 (19-133)||(17762736-17762853)
chr6 (19-133)||(3809012-3809128)
chr6 (141-254)||(16452329-16452442)
chr6 (24-133)||(17757836-17757948)
chr6 (164-362)||(9572667-9572868)
chr6 (19-133)||(2973243-2973358)
chr6 (19-129)||(26830432-26830543)
chr6 (173-254)||(6097451-6097533)
chr6 (172-245)||(16569107-16569180)
chr6 (130-228)||(4045467-4045566)
chr6 (141-254)||(16578518-16578632)
chr6 (141-254)||(16616748-16616862)
chr6 (141-254)||(16653166-16653280)
chr6 (141-254)||(16554923-16555037)
chr6 (141-254)||(16631479-16631593)
chr6 (129-265)||(25073611-25073748)
chr6 (141-254)||(27647915-27648028)
chr6 (19-126)||(22425136-22425246)
chr6 (178-254)||(25421396-25421474)
chr6 (178-254)||(6027337-6027415)
chr6 (178-245)||(13154005-13154074)
chr6 (178-245)||(33342114-33342183)
chr6 (178-245)||(34164948-34165017)
chr6 (189-254)||(34167183-34167248)
chr6 (210-254)||(4641090-4641134)
[»] chr7 (85 HSPs)
chr7 (129-399)||(8359174-8359442)
chr7 (129-389)||(29608780-29609040)
chr7 (129-397)||(3259038-3259305)
chr7 (129-397)||(2390325-2390596)
chr7 (129-397)||(4508563-4508831)
chr7 (135-397)||(34310571-34310835)
chr7 (129-399)||(4510403-4510673)
chr7 (129-399)||(4512245-4512515)
chr7 (129-359)||(22328285-22328516)
chr7 (129-374)||(32357935-32358179)
chr7 (129-334)||(48599255-48599459)
chr7 (129-265)||(22270016-22270151)
chr7 (128-374)||(6359830-6360078)
chr7 (129-254)||(23555083-23555208)
chr7 (19-133)||(34311020-34311135)
chr7 (129-245)||(6432014-6432129)
chr7 (129-230)||(19502221-19502322)
chr7 (129-254)||(30024733-30024857)
chr7 (129-399)||(2360836-2361097)
chr7 (19-133)||(6431720-6431835)
chr7 (19-133)||(22269724-22269837)
chr7 (32-133)||(2361275-2361377)
chr7 (129-230)||(23565085-23565186)
chr7 (129-265)||(31518946-31519081)
chr7 (141-254)||(35853969-35854082)
chr7 (129-245)||(27347860-27347975)
chr7 (19-133)||(3258745-3258860)
chr7 (129-263)||(31105385-31105518)
chr7 (141-254)||(29991108-29991221)
chr7 (129-230)||(48491622-48491723)
chr7 (129-245)||(2759207-2759322)
chr7 (29-133)||(4512694-4512798)
chr7 (133-245)||(25615900-25616012)
chr7 (129-245)||(31732979-31733094)
chr7 (29-133)||(48599638-48599743)
chr7 (144-254)||(39731426-39731537)
chr7 (129-216)||(47673981-47674068)
chr7 (134-245)||(48489479-48489589)
chr7 (19-133)||(2390031-2390146)
chr7 (129-247)||(36146416-36146532)
chr7 (129-230)||(496007-496108)
chr7 (129-230)||(1113700-1113801)
chr7 (129-265)||(4253518-4253654)
chr7 (141-230)||(8153397-8153486)
chr7 (141-230)||(25766984-25767074)
chr7 (29-133)||(4509010-4509114)
chr7 (29-133)||(4510852-4510956)
chr7 (141-245)||(14069843-14069946)
chr7 (141-245)||(14379871-14379974)
chr7 (129-245)||(41317444-41317559)
chr7 (129-216)||(4586204-4586291)
chr7 (18-132)||(22328703-22328819)
chr7 (129-216)||(26417359-26417446)
chr7 (135-254)||(47676137-47676255)
chr7 (19-133)||(29608490-29608600)
chr7 (129-230)||(18126687-18126788)
chr7 (129-245)||(41649021-41649135)
chr7 (129-245)||(43864287-43864402)
chr7 (144-230)||(43504178-43504266)
chr7 (141-254)||(20343951-20344064)
chr7 (129-265)||(23344018-23344151)
chr7 (57-133)||(8359622-8359699)
chr7 (135-245)||(18396367-18396477)
chr7 (163-230)||(24525526-24525594)
chr7 (19-133)||(6360216-6360331)
chr7 (141-265)||(48408857-48408984)
chr7 (145-245)||(3904626-3904726)
chr7 (129-245)||(38671232-38671347)
chr7 (141-254)||(24789896-24790009)
chr7 (19-83)||(32358191-32358255)
chr7 (173-245)||(1560675-1560749)
chr7 (141-230)||(4178829-4178917)
chr7 (129-261)||(36574510-36574641)
chr7 (129-247)||(12097875-12097984)
chr7 (178-254)||(18388760-18388838)
chr7 (178-254)||(18392196-18392274)
chr7 (129-188)||(31518838-31518896)
chr7 (178-254)||(32060322-32060400)
chr7 (193-245)||(26639432-26639484)
chr7 (162-239)||(5116679-5116758)
chr7 (178-254)||(6592340-6592418)
chr7 (178-254)||(6594558-6594636)
chr7 (181-245)||(30814530-30814594)
chr7 (162-261)||(5513661-5513760)
chr7 (29-73)||(22552804-22552846)
[»] chr3 (95 HSPs)
chr3 (129-399)||(49199320-49199595)
chr3 (129-399)||(43401652-43401927)
chr3 (129-399)||(46860517-46860787)
chr3 (129-397)||(36018895-36019159)
chr3 (129-399)||(43403595-43403870)
chr3 (129-399)||(41819380-41819648)
chr3 (138-399)||(6095455-6095715)
chr3 (163-397)||(55301827-55302064)
chr3 (129-374)||(30236168-30236413)
chr3 (129-397)||(54593747-54594017)
chr3 (129-278)||(46173400-46173549)
chr3 (129-278)||(4569995-4570144)
chr3 (129-254)||(34491255-34491379)
chr3 (19-133)||(46860220-46860335)
chr3 (129-254)||(7762308-7762433)
chr3 (129-265)||(32891147-32891282)
chr3 (145-336)||(40913352-40913546)
chr3 (19-133)||(28074366-28074480)
chr3 (19-133)||(43404037-43404152)
chr3 (19-133)||(54593454-54593569)
chr3 (129-230)||(7764507-7764608)
chr3 (129-254)||(9581325-9581450)
chr3 (129-245)||(40735426-40735541)
chr3 (19-133)||(6095903-6096018)
chr3 (19-133)||(47304001-47304115)
chr3 (141-254)||(19683889-19684002)
chr3 (129-230)||(29810911-29811012)
chr3 (141-254)||(45095218-45095331)
chr3 (129-245)||(29813106-29813221)
chr3 (129-245)||(44331588-44331703)
chr3 (129-245)||(51398857-51398972)
chr3 (129-265)||(53921493-53921628)
chr3 (19-130)||(49199778-49199890)
chr3 (19-133)||(36018600-36018715)
chr3 (129-372)||(47304294-47304543)
chr3 (129-230)||(760890-760991)
chr3 (132-245)||(16499075-16499187)
chr3 (141-230)||(37408513-37408602)
chr3 (129-245)||(22835012-22835127)
chr3 (129-245)||(40734541-40734656)
chr3 (144-254)||(801148-801260)
chr3 (18-133)||(4569699-4569815)
chr3 (19-133)||(40913087-40913203)
chr3 (19-130)||(43402097-43402209)
chr3 (19-133)||(34490962-34491077)
chr3 (129-247)||(44700487-44700603)
chr3 (19-133)||(55302269-55302384)
chr3 (141-254)||(5258144-5258257)
chr3 (141-254)||(23197939-23198052)
chr3 (141-254)||(23200138-23200251)
chr3 (129-230)||(39153385-39153486)
chr3 (129-245)||(29196396-29196511)
chr3 (29-133)||(41819826-41819930)
chr3 (19-133)||(30235874-30235989)
chr3 (141-254)||(5260323-5260436)
chr3 (144-230)||(7780028-7780114)
chr3 (129-245)||(29682402-29682517)
chr3 (129-245)||(31314488-31314603)
chr3 (129-245)||(32744446-32744561)
chr3 (144-230)||(9636150-9636236)
chr3 (129-230)||(5236481-5236581)
chr3 (131-265)||(33191877-33192009)
chr3 (129-245)||(9666476-9666591)
chr3 (128-266)||(35138694-35138832)
chr3 (131-356)||(20937701-20937927)
chr3 (29-133)||(5434181-5434287)
chr3 (145-245)||(4055773-4055874)
chr3 (141-254)||(6716554-6716667)
chr3 (141-254)||(54635179-54635292)
chr3 (129-188)||(31340268-31340326)
chr3 (173-245)||(45283071-45283145)
chr3 (129-245)||(23391919-23392034)
chr3 (128-282)||(39127589-39127745)
chr3 (145-245)||(4075480-4075581)
chr3 (129-235)||(5433901-5434001)
chr3 (189-245)||(27305720-27305775)
chr3 (290-374)||(31340102-31340186)
chr3 (178-254)||(3617540-3617618)
chr3 (178-245)||(25637517-25637586)
chr3 (129-215)||(51352150-51352235)
chr3 (19-66)||(31340448-31340495)
chr3 (178-245)||(4598532-4598601)
chr3 (178-245)||(10056309-10056378)
chr3 (178-245)||(10058531-10058600)
chr3 (178-245)||(10060753-10060822)
chr3 (178-245)||(10062975-10063044)
chr3 (178-245)||(10065197-10065266)
chr3 (178-245)||(10211485-10211554)
chr3 (129-230)||(23410353-23410454)
chr3 (189-265)||(2075065-2075140)
chr3 (178-230)||(10209265-10209319)
chr3 (178-245)||(4600753-4600822)
chr3 (294-374)||(5270580-5270661)
chr3 (135-175)||(24635306-24635345)
chr3 (131-220)||(25491003-25491091)
[»] chr4 (103 HSPs)
chr4 (129-399)||(2209756-2210031)
chr4 (129-399)||(379423-379693)
chr4 (129-399)||(41964458-41964726)
chr4 (129-374)||(12073435-12073680)
chr4 (129-397)||(50673705-50673972)
chr4 (129-399)||(40632488-40632758)
chr4 (129-322)||(46703543-46703737)
chr4 (130-374)||(35662485-35662728)
chr4 (129-336)||(6655999-6656205)
chr4 (131-330)||(8665453-8665651)
chr4 (129-361)||(26699335-26699568)
chr4 (129-399)||(41639469-41639737)
chr4 (135-372)||(33989893-33990131)
chr4 (129-330)||(8648182-8648382)
chr4 (129-357)||(12119582-12119815)
chr4 (129-336)||(27416884-27417090)
chr4 (129-334)||(50262617-50262826)
chr4 (129-333)||(26364279-26364483)
chr4 (129-276)||(54883063-54883210)
chr4 (129-254)||(56178637-56178762)
chr4 (19-133)||(8647887-8648002)
chr4 (19-133)||(8665156-8665271)
chr4 (131-322)||(33089923-33090116)
chr4 (129-245)||(48893648-48893763)
chr4 (19-133)||(379128-379243)
chr4 (129-245)||(9927468-9927583)
chr4 (129-245)||(26175646-26175761)
chr4 (130-265)||(31474195-31474329)
chr4 (18-133)||(55085669-55085785)
chr4 (19-133)||(40630733-40630848)
chr4 (129-262)||(37229714-37229847)
chr4 (129-230)||(48143086-48143187)
chr4 (19-124)||(50263011-50263117)
chr4 (129-245)||(5429722-5429837)
chr4 (129-265)||(6542169-6542304)
chr4 (141-256)||(29999804-29999920)
chr4 (129-245)||(36463399-36463514)
chr4 (129-245)||(37740668-37740783)
chr4 (129-245)||(46147401-46147516)
chr4 (19-133)||(6655705-6655820)
chr4 (144-254)||(13992293-13992402)
chr4 (19-133)||(26364014-26364129)
chr4 (32-133)||(46703263-46703364)
chr4 (129-245)||(47038421-47038535)
chr4 (141-245)||(5370092-5370196)
chr4 (129-245)||(36994567-36994682)
chr4 (257-371)||(55085325-55085439)
chr4 (144-254)||(31495316-31495428)
chr4 (129-228)||(34570440-34570539)
chr4 (19-133)||(35662191-35662306)
chr4 (19-133)||(50674150-50674265)
chr4 (19-133)||(54882769-54882884)
chr4 (132-265)||(4588005-4588137)
chr4 (135-266)||(22882740-22882870)
chr4 (135-266)||(22934404-22934534)
chr4 (19-111)||(2209457-2209550)
chr4 (141-245)||(12743935-12744038)
chr4 (141-245)||(12745324-12745427)
chr4 (29-133)||(33989622-33989726)
chr4 (141-265)||(52095352-52095475)
chr4 (129-212)||(24969155-24969238)
chr4 (19-133)||(41964166-41964279)
chr4 (19-112)||(27417276-27417370)
chr4 (290-397)||(46703752-46703860)
chr4 (129-230)||(54199930-54200031)
chr4 (18-133)||(12073141-12073256)
chr4 (141-245)||(12739560-12739663)
chr4 (129-245)||(45687192-45687307)
chr4 (129-216)||(3913491-3913578)
chr4 (141-254)||(8393448-8393562)
chr4 (141-254)||(8395657-8395771)
chr4 (141-214)||(12744087-12744160)
chr4 (19-132)||(46569851-46569965)
chr4 (129-245)||(52467364-52467479)
chr4 (130-245)||(29254538-29254652)
chr4 (144-214)||(12745476-12745546)
chr4 (129-230)||(5871863-5871964)
chr4 (141-216)||(12747794-12747869)
chr4 (163-230)||(13009468-13009536)
chr4 (129-274)||(21688292-21688437)
chr4 (132-261)||(21703829-21703958)
chr4 (131-243)||(34112862-34112973)
chr4 (129-230)||(5207866-5207967)
chr4 (162-265)||(51337139-51337242)
chr4 (210-282)||(38811162-38811235)
chr4 (131-265)||(44967818-44967952)
chr4 (178-230)||(7124992-7125046)
chr4 (178-245)||(5136155-5136224)
chr4 (178-245)||(5138380-5138449)
chr4 (131-188)||(44570432-44570489)
chr4 (131-213)||(6677514-6677597)
chr4 (19-129)||(33089648-33089759)
chr4 (131-179)||(34788851-34788898)
chr4 (302-372)||(6719771-6719842)
chr4 (178-230)||(7122773-7122827)
chr4 (311-374)||(21688470-21688533)
chr4 (290-365)||(32091645-32091719)
chr4 (29-71)||(3785850-3785891)
chr4 (167-261)||(35369440-35369534)
chr4 (129-178)||(55085442-55085490)
chr4 (19-55)||(8653349-8653385)
chr4 (135-179)||(32091527-32091570)
chr4 (139-265)||(37754949-37755076)
[»] chr8 (73 HSPs)
chr8 (129-397)||(40328822-40329086)
chr8 (129-393)||(11384028-11384291)
chr8 (129-374)||(4283567-4283811)
chr8 (129-397)||(18655443-18655713)
chr8 (129-399)||(3772235-3772504)
chr8 (129-374)||(42434870-42435116)
chr8 (129-336)||(40221788-40221994)
chr8 (129-336)||(10930116-10930324)
chr8 (129-254)||(42498237-42498362)
chr8 (19-133)||(40328528-40328643)
chr8 (129-265)||(1292454-1292588)
chr8 (19-133)||(42435295-42435410)
chr8 (129-222)||(30143383-30143476)
chr8 (129-245)||(3303680-3303795)
chr8 (129-245)||(15212829-15212944)
chr8 (129-245)||(27811321-27811436)
chr8 (129-245)||(33352193-33352308)
chr8 (129-245)||(43036466-43036581)
chr8 (141-230)||(19945383-19945473)
chr8 (19-125)||(22976283-22976389)
chr8 (145-254)||(34256507-34256616)
chr8 (141-254)||(44303910-44304023)
chr8 (129-245)||(5689314-5689429)
chr8 (29-133)||(40221504-40221609)
chr8 (131-245)||(7597659-7597774)
chr8 (144-245)||(2627792-2627895)
chr8 (129-243)||(4731701-4731814)
chr8 (134-243)||(4162545-4162652)
chr8 (145-254)||(17982712-17982821)
chr8 (129-230)||(18141863-18141964)
chr8 (141-254)||(31218312-31218425)
chr8 (145-254)||(34254331-34254440)
chr8 (133-265)||(10015128-10015257)
chr8 (129-245)||(12702644-12702759)
chr8 (129-245)||(40321123-40321238)
chr8 (129-216)||(30291650-30291737)
chr8 (19-133)||(11383735-11383850)
chr8 (129-247)||(19491707-19491824)
chr8 (141-254)||(1746219-1746331)
chr8 (141-254)||(3439558-3439671)
chr8 (129-216)||(44353836-44353923)
chr8 (129-247)||(1345379-1345496)
chr8 (135-265)||(8153807-8153936)
chr8 (131-245)||(18106091-18106201)
chr8 (134-245)||(29796329-29796442)
chr8 (136-236)||(32902191-32902292)
chr8 (132-245)||(41366625-41366736)
chr8 (131-261)||(11711993-11712124)
chr8 (131-245)||(6599017-6599130)
chr8 (131-245)||(6674470-6674583)
chr8 (19-133)||(44353541-44353656)
chr8 (146-259)||(3073870-3073981)
chr8 (165-245)||(4733784-4733864)
chr8 (173-245)||(4743224-4743296)
chr8 (19-129)||(2999828-2999939)
chr8 (141-254)||(25690009-25690122)
chr8 (226-373)||(10240263-10240411)
chr8 (251-334)||(2999723-2999806)
chr8 (141-245)||(9765800-9765902)
chr8 (130-245)||(8965701-8965815)
chr8 (129-216)||(1822335-1822423)
chr8 (129-216)||(1856780-1856868)
chr8 (134-379)||(11137073-11137320)
chr8 (189-245)||(38863961-38864017)
chr8 (178-245)||(15290614-15290683)
chr8 (178-245)||(15470983-15471052)
chr8 (178-245)||(42575333-42575402)
chr8 (129-179)||(3231872-3231921)
chr8 (129-159)||(10929842-10929872)
chr8 (164-205)||(10929865-10929907)
chr8 (131-206)||(30909413-30909487)
chr8 (66-133)||(4283320-4283388)
chr8 (129-188)||(10240197-10240256)
[»] chr1 (94 HSPs)
chr1 (129-386)||(47115214-47115472)
chr1 (164-397)||(28242382-28242616)
chr1 (129-399)||(37032924-37033198)
chr1 (129-374)||(47255217-47255465)
chr1 (129-397)||(29136290-29136558)
chr1 (129-397)||(37168340-37168606)
chr1 (129-374)||(31925587-31925832)
chr1 (129-392)||(11348741-11349006)
chr1 (129-374)||(13548880-13549125)
chr1 (163-399)||(37876621-37876858)
chr1 (129-384)||(7482100-7482356)
chr1 (129-322)||(13547022-13547214)
chr1 (129-374)||(42297852-42298100)
chr1 (131-363)||(6808497-6808730)
chr1 (129-330)||(19754538-19754737)
chr1 (132-274)||(193657-193799)
chr1 (129-397)||(34603619-34603874)
chr1 (19-133)||(37168046-37168161)
chr1 (129-254)||(8550787-8550912)
chr1 (19-133)||(37033377-37033492)
chr1 (19-133)||(7482534-7482650)
chr1 (131-336)||(19752731-19752932)
chr1 (19-133)||(19754240-19754355)
chr1 (129-269)||(22079359-22079501)
chr1 (19-133)||(28242138-28242252)
chr1 (19-133)||(37879215-37879330)
chr1 (129-254)||(3189373-3189498)
chr1 (129-254)||(3198190-3198315)
chr1 (129-254)||(3207029-3207154)
chr1 (19-133)||(29135997-29136111)
chr1 (129-230)||(46064961-46065062)
chr1 (129-245)||(28220236-28220351)
chr1 (129-245)||(28265564-28265679)
chr1 (19-133)||(42298279-42298394)
chr1 (129-247)||(49918393-49918510)
chr1 (129-245)||(834177-834292)
chr1 (129-245)||(3156908-3157023)
chr1 (129-265)||(15820350-15820485)
chr1 (129-245)||(31659281-31659396)
chr1 (134-245)||(28223431-28223541)
chr1 (141-247)||(20762727-20762833)
chr1 (19-133)||(34603325-34603440)
chr1 (141-254)||(13316352-13316465)
chr1 (132-245)||(13659346-13659458)
chr1 (129-230)||(44455203-44455304)
chr1 (138-230)||(1833574-1833666)
chr1 (129-245)||(4552647-4552762)
chr1 (129-245)||(45644364-45644479)
chr1 (136-261)||(5459956-5460081)
chr1 (19-133)||(193361-193475)
chr1 (19-133)||(11348447-11348562)
chr1 (129-215)||(16455664-16455750)
chr1 (19-133)||(34602643-34602758)
chr1 (19-133)||(47114921-47115035)
chr1 (129-247)||(50167183-50167300)
chr1 (141-254)||(51765450-51765565)
chr1 (19-132)||(13547394-13547508)
chr1 (19-132)||(13549305-13549419)
chr1 (129-247)||(37503565-37503679)
chr1 (19-126)||(47255650-47255753)
chr1 (129-254)||(50169211-50169335)
chr1 (129-245)||(13137986-13138101)
chr1 (129-264)||(23555257-23555390)
chr1 (129-247)||(41360957-41361074)
chr1 (129-264)||(37282682-37282817)
chr1 (19-126)||(19752435-19752542)
chr1 (129-254)||(196908-197033)
chr1 (129-247)||(40122204-40122323)
chr1 (190-282)||(2926613-2926706)
chr1 (129-216)||(10925266-10925356)
chr1 (45-133)||(31926010-31926099)
chr1 (129-245)||(37559877-37559994)
chr1 (129-265)||(927966-928101)
chr1 (128-263)||(2262965-2263101)
chr1 (129-245)||(3847131-3847246)
chr1 (131-309)||(12318468-12318646)
chr1 (144-254)||(40282435-40282545)
chr1 (134-379)||(9109292-9109540)
chr1 (145-237)||(13938195-13938288)
chr1 (173-254)||(9987287-9987369)
chr1 (173-254)||(20622237-20622319)
chr1 (134-214)||(30476486-30476566)
chr1 (141-254)||(9036471-9036584)
chr1 (178-254)||(44203722-44203800)
chr1 (173-230)||(36683766-36683824)
chr1 (173-245)||(21054044-21054117)
chr1 (129-210)||(3460739-3460821)
chr1 (29-98)||(6068377-6068447)
chr1 (189-227)||(8871089-8871127)
chr1 (129-158)||(37879007-37879036)
chr1 (129-264)||(44650153-44650288)
chr1 (131-179)||(1050520-1050567)
chr1 (135-179)||(25652135-25652178)
chr1 (24-102)||(28318094-28318173)
[»] scaffold0176 (2 HSPs)
scaffold0176 (129-398)||(17859-18128)
scaffold0176 (19-133)||(18305-18420)
[»] chr5 (72 HSPs)
chr5 (130-372)||(27637495-27637737)
chr5 (129-398)||(213508-213780)
chr5 (129-336)||(40147304-40147510)
chr5 (129-374)||(5058088-5058334)
chr5 (129-379)||(16640814-16641062)
chr5 (129-265)||(13239794-13239930)
chr5 (129-265)||(28278359-28278494)
chr5 (131-355)||(316807-317032)
chr5 (130-265)||(16452124-16452258)
chr5 (19-133)||(40147010-40147125)
chr5 (29-133)||(213228-213333)
chr5 (19-133)||(28278064-28278180)
chr5 (145-254)||(37439200-37439309)
chr5 (129-265)||(9049332-9049467)
chr5 (29-133)||(27015291-27015396)
chr5 (163-372)||(27015599-27015808)
chr5 (129-254)||(538068-538192)
chr5 (141-230)||(25412815-25412904)
chr5 (129-245)||(13488246-13488361)
chr5 (129-245)||(42428440-42428555)
chr5 (19-133)||(38746754-38746869)
chr5 (188-278)||(4160701-4160791)
chr5 (141-254)||(13343116-13343228)
chr5 (141-254)||(36074043-36074155)
chr5 (129-245)||(533812-533927)
chr5 (144-254)||(9789224-9789335)
chr5 (144-254)||(16409532-16409643)
chr5 (144-254)||(26177939-26178050)
chr5 (129-247)||(8565954-8566071)
chr5 (129-265)||(13695680-13695816)
chr5 (141-254)||(30182643-30182756)
chr5 (129-230)||(33831723-33831824)
chr5 (129-226)||(42309963-42310060)
chr5 (29-129)||(5057807-5057907)
chr5 (141-245)||(32636879-32636982)
chr5 (135-247)||(42426243-42426354)
chr5 (144-254)||(18441648-18441759)
chr5 (129-245)||(30682932-30683049)
chr5 (129-216)||(39468587-39468674)
chr5 (135-243)||(28750667-28750774)
chr5 (129-216)||(38747048-38747135)
chr5 (19-133)||(27637920-27638034)
chr5 (141-254)||(10593312-10593426)
chr5 (173-254)||(26170848-26170930)
chr5 (305-397)||(40751195-40751284)
chr5 (129-265)||(3075648-3075783)
chr5 (131-242)||(33906042-33906154)
chr5 (135-247)||(10054823-10054935)
chr5 (129-245)||(31183015-31183129)
chr5 (144-254)||(29722582-29722692)
chr5 (144-254)||(29751160-29751270)
chr5 (141-254)||(22536290-22536403)
chr5 (161-265)||(30793210-30793314)
chr5 (131-235)||(3325958-3326063)
chr5 (130-188)||(42926911-42926968)
chr5 (144-254)||(29720422-29720532)
chr5 (178-254)||(25078211-25078289)
chr5 (178-254)||(25136180-25136258)
chr5 (178-254)||(40380181-40380259)
chr5 (178-254)||(40382392-40382470)
chr5 (163-265)||(42926967-42927069)
chr5 (305-397)||(40763200-40763289)
chr5 (189-245)||(19806466-19806521)
chr5 (19-128)||(316515-316624)
chr5 (131-322)||(10700581-10700771)
chr5 (178-245)||(16544499-16544568)
chr5 (178-245)||(16546721-16546790)
chr5 (19-116)||(10055027-10055125)
chr5 (29-110)||(30802700-30802782)
chr5 (19-132)||(4160383-4160496)
chr5 (133-179)||(14689503-14689548)
chr5 (29-107)||(16642208-16642285)
[»] chr2 (58 HSPs)
chr2 (19-397)||(7451049-7451429)
chr2 (129-399)||(42287966-42288235)
chr2 (129-399)||(45726972-45727240)
chr2 (129-352)||(35446788-35447009)
chr2 (129-368)||(33648214-33648454)
chr2 (180-397)||(17450671-17450884)
chr2 (129-357)||(24398100-24398332)
chr2 (129-277)||(1631710-1631857)
chr2 (129-245)||(2334427-2334543)
chr2 (129-254)||(36988076-36988201)
chr2 (129-260)||(17490143-17490273)
chr2 (132-245)||(17057379-17057491)
chr2 (132-245)||(17085362-17085474)
chr2 (29-133)||(1632036-1632141)
chr2 (129-245)||(6595015-6595131)
chr2 (129-245)||(36773605-36773720)
chr2 (29-133)||(42288414-42288518)
chr2 (129-245)||(723754-723869)
chr2 (129-247)||(33162458-33162575)
chr2 (141-254)||(4503133-4503245)
chr2 (141-254)||(5723256-5723369)
chr2 (141-254)||(45099810-45099922)
chr2 (132-216)||(7815311-7815395)
chr2 (29-133)||(35447188-35447292)
chr2 (129-245)||(36318019-36318134)
chr2 (131-354)||(30217945-30218168)
chr2 (19-133)||(45726679-45726793)
chr2 (129-230)||(42362395-42362496)
chr2 (129-245)||(11067348-11067463)
chr2 (129-245)||(38312283-38312398)
chr2 (129-244)||(26353227-26353341)
chr2 (141-230)||(4484354-4484444)
chr2 (129-245)||(14633835-14633951)
chr2 (129-245)||(34139780-34139896)
chr2 (129-245)||(11151601-11151716)
chr2 (141-245)||(29867924-29868027)
chr2 (191-243)||(28672036-28672088)
chr2 (144-254)||(32289621-32289732)
chr2 (145-230)||(30833404-30833490)
chr2 (132-265)||(42019859-42019995)
chr2 (129-230)||(11049596-11049698)
chr2 (141-254)||(36205665-36205777)
chr2 (129-254)||(11690544-11690668)
chr2 (129-220)||(13121812-13121901)
chr2 (19-111)||(24397806-24397900)
chr2 (144-254)||(6266749-6266859)
chr2 (141-245)||(13656041-13656146)
chr2 (19-133)||(17450340-17450455)
chr2 (178-254)||(12647386-12647464)
chr2 (181-245)||(39284930-39284994)
chr2 (134-246)||(7597020-7597131)
chr2 (129-216)||(14202450-14202530)
chr2 (19-111)||(33647918-33648012)
chr2 (131-215)||(42261524-42261609)
chr2 (189-230)||(42412121-42412161)
chr2 (135-179)||(4561137-4561180)
chr2 (131-182)||(34811295-34811345)
chr2 (29-102)||(24197658-24197731)
[»] scaffold0466 (2 HSPs)
scaffold0466 (129-374)||(7370-7616)
scaffold0466 (19-133)||(7077-7192)
[»] scaffold0236 (1 HSPs)
scaffold0236 (143-397)||(10546-10800)
[»] scaffold0219 (1 HSPs)
scaffold0219 (131-257)||(27439-27566)
[»] scaffold0286 (2 HSPs)
scaffold0286 (141-254)||(11612-11725)
scaffold0286 (19-133)||(11307-11422)
[»] scaffold0014 (2 HSPs)
scaffold0014 (19-133)||(80587-80702)
scaffold0014 (129-187)||(80351-80408)
[»] scaffold0016 (1 HSPs)
scaffold0016 (141-254)||(114657-114770)
[»] scaffold0002 (2 HSPs)
scaffold0002 (141-254)||(434588-434701)
scaffold0002 (131-215)||(490359-490444)
[»] scaffold0006 (1 HSPs)
scaffold0006 (132-245)||(149107-149219)
[»] scaffold0066 (1 HSPs)
scaffold0066 (129-245)||(20425-20540)
[»] scaffold1519 (1 HSPs)
scaffold1519 (141-254)||(971-1083)
[»] scaffold0491 (2 HSPs)
scaffold0491 (144-254)||(8735-8846)
scaffold0491 (144-254)||(11161-11272)
[»] scaffold0674 (1 HSPs)
scaffold0674 (178-245)||(3735-3804)
[»] scaffold0565 (1 HSPs)
scaffold0565 (178-254)||(2604-2682)
[»] scaffold0197 (1 HSPs)
scaffold0197 (290-359)||(1291-1360)
[»] scaffold0137 (1 HSPs)
scaffold0137 (178-245)||(6363-6432)
[»] scaffold0477 (1 HSPs)
scaffold0477 (210-254)||(6981-7025)


Alignment Details
Target: chr6 (Bit Score: 343; Significance: 0; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 20 - 399
Target Start/End: Original strand, 26800521 - 26800900
Alignment:
Q  20 atcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggatgggaaacacatgagtggagagtctattgaga 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26800521 atcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcatgggatgggaaacacatgagtggagagtctattgaga 26800620  T
Q  120 gcaacttgggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctcc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800621 gcaacttgggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctcc 26800720  T
Q  220 agagtaggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggt 319  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||       |||||||||||| |||||||||||||||||    
T  26800721 agagtaggtcattgttggaccgaactggatgaacatttcttggtgttgttatcttttctctactctttttatcttgtttatcttttggttagattgtggt 26800820  T
Q  320 ttttctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26800821 tttgctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 26800900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 129 - 396
Target Start/End: Complemental strand, 22424952 - 22424682
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaatttt-gtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22424952 gtgagcttgtttaagctaatttcttgtaacccatttttgtatctctttgtaagaactcattatagtggattggagagatcaatctctccttcagagtagg 22424853  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtgg--tttttct 325  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||||||       ||||||||||||||| |||||||||||||  ||||||     
T  22424852 tcattgttggaccgtactgggtgaacatttcttggtgttgttatcttttctctactctctttatcttgtttatccttaggttagattgtggtttttttca 22424753  T
Q  326 atgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggtt 396  Q
    ||||||||| |||||| | |||||||||||||||||| ||| ||||||| |||||||||||||||||||||    
T  22424752 atgcacttggtttctatattagatctagattgttgttgttgtttgtggttatttacatttggttattggtt 22424682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 17758066 - 17758337
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||     
T  17758066 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtagt 17758164  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttc-tctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    |||   |||||||||||||| ||||||||||||||||||||||||||| | | |||       ||||||||||||||||||||||||||||||||| |||    
T  17758165 tcaagtttggaccgaactaggtgaacatttcttggtgttgttatctttccttttacgctctttatcttgtttatcctttggttagattgtggttttgcta 17758264  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  17758265 tgcacttgttttctagattagatctagattgttgttattgcttgcggttatttacatttggttattggttgcc 17758337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 3808834 - 3808559
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  3808834 gtgagcttgttgaaactaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 3808735  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    ||||  |||||||||||||| ||||| || |||||| |||||| ||   ||||||||||       ||||||||||||||||||||||||| |||||||     
T  3808734 tcatgattggaccgaactaggtgaacaatctcttggggttgttgtctatttttctctactctctttatcttgtttatcctttggttagattatggttttg 3808635  T
Q  324 ctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||    
T  3808634 ctatgcatttgttttctagattagatctagattgttgctattgcttttggttatttacatttgattattggttgcc 3808559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 17763033 - 17763302
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||| ||||||||||| |||||||||||||| |||||||||||||||||||||||     
T  17763033 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctttttggaagaactcattgatagtggattggagtgatcaatctctcctccagagtaga 17763131  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttc-tctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    |||   |||||||||||||| ||||||||||||||||||||||||||||| | |||       |||||||| |||||||||||||||||| ||||| |||    
T  17763132 tcaagtttggaccgaactaggtgaacatttcttggtgttgttatcttttcttttactctctttatcttgttcatcctttggttagattgtagttttgcta 17763231  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||||||| |||||| |||||||||||||||||||||| ||||| | ||||||||||||||||||||||    
T  17763232 tgcacttgttatctagattagatctagattgttgttattgtttgtgattatttacatttggttattggttg 17763302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 21588974 - 21589218
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21588974 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 21589072  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| | || ||| |||||||||||| ||||    
T  21589073 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttccttatcttgtttattccttagttggattgtggttttgctat 21589171  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    ||||||| ||| |||||||| |||| |||||||||||||||||||||    
T  21589172 gcacttggtttatagactaggtctatattgttgttattgcttgtggt 21589218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 5043670 - 5043939
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||    
T  5043670 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtagattggagagatcaatctctcctccatagtagg 5043768  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||| |||       |||||||||||   |||||| |||||||||||| ||||    
T  5043769 tcattgttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatttcttggttggattgtggttttgctat 5043868  T
Q  328 gcacttgttttctagactagatc--tagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||||  || |||| ||| ||  || ||||||||| ||||||| ||| ||||||||||||||||||||||    
T  5043869 gcacttg-attatagaataggtctatatattgttgttgttgcttgaggttatttacatttggttattggttg 5043939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 2973064 - 2972791
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  2973064 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctcaagagtagg 2972966  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatctttt----ctctacnnnnnnnatcttgtttatcctttggttagattgtgg-tttt 322  Q
    |||  ||| ||||||||||| ||||||||||||||||||||||| ||||    |||| |       |||||||||||| |||||||||||||||| ||||    
T  2972965 tca-agttcgaccgaactaggtgaacatttcttggtgttgttatttttttttactct-ctctctatatcttgtttatcatttggttagattgtggttttt 2972868  T
Q  323 tctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    |||||||||||  ||| |||||||| |||| ||||||||| ||| ||||||| ||||||||||| ||||||||||||    
T  2972867 tctatgcacttagtttatagactaggtctatattgttgttgttgtttgtggttatttacatttgattattggttgcc 2972791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 129 - 396
Target Start/End: Complemental strand, 26830248 - 26829979
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||||||   |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  26830248 gtgagcttgttgaagctaatttcttgtaatccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccaaagtagg 26830150  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggtttttc 324  Q
    |||  ||| ||| ||||| | |||||||||||||||||||||||||||||| ||  |       |||||||||| |||||   || |||||||||||| |    
T  26830149 tca-agtttgactgaactgggtgaacatttcttggtgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgc 26830051  T
Q  325 tatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggtt 396  Q
    |||||||||| ||| |||||||| | || ||||||||||||||||||||| |||||||||||||||||||||    
T  26830050 tatgcacttggtttatagactaggtttatattgttgttattgcttgtggttatttacatttggttattggtt 26829979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 129 - 278
Target Start/End: Original strand, 21593707 - 21593855
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  21593707 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 21593805  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttct 278  Q
    |||  ||||||||||||| | ||||||||||||||||||||||||||||||    
T  21593806 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttct 21593855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 26954411 - 26954294
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  26954411 gtgagcttgttgaagctaatttcttgtaactcatct-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtagg 26954313  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  |||||||||||||||    
T  26954312 tca-agttggaccgaactag 26954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 336
Target Start/End: Complemental strand, 603213 - 603003
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| || ||||||||||||||| |||||||||||| | ||| ||||    
T  603213 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcgttgatagtggattggagaaatcaatctctccccaagattagg 603115  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    |||  ||||||||||||| | | ||| || ||||| ||||||| ||   ||||||||||       ||||||||||| | |||||| ||||||||||||     
T  603114 tca-agttggaccgaactgggtcaacaatctcttgatgttgttgtctatttttctctactctctttatcttgtttatgccttggttggattgtggtttta 603016  T
Q  324 ctatgcacttgtt 336  Q
    |||||||||||||    
T  603015 ctatgcacttgtt 603003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 263
Target Start/End: Complemental strand, 28137533 - 28137400
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  28137533 gtgagcttgtttaagctaatttcttgtaacccattt-gtatttctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtagg 28137435  T
Q  228 tcattgttggaccgaactagatgaacatttcttggt 263  Q
    |||  ||||||||||| |   |||||||||||||||    
T  28137434 tca-agttggaccgaattgtgtgaacatttcttggt 28137400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 5413507 - 5413403
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  5413507 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggac 5413409  T
Q  240 cgaact 245  Q
    ||||||    
T  5413408 cgaact 5413403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 135 - 245
Target Start/End: Complemental strand, 9183150 - 9183041
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 233  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||  |    
T  9183150 ttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattatgtca-ag 9183053  T
Q  234 ttggaccgaact 245  Q
    ||||||||||||    
T  9183052 ttggaccgaact 9183041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 5406313 - 5406224
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5406313 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 5406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 5410638 - 5410549
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5410638 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 5410549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 31404788 - 31404675
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||   ||||||    
T  31404788 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggccaagtttggac 31404690  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  31404689 cgaactgggtgaaca 31404675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 33211310 - 33211195
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||| ||||| |||||||||||| || |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||    
T  33211310 gtgagcttgatgaagttaatttcttgtagctcattt-gtatctctttgtaagaactcatttataatggattggagagatcaatctctcccccagagtagg 33211212  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  33211211 tca-agttggaccgaact 33211195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 162 - 245
Target Start/End: Complemental strand, 5409162 - 5409078
Alignment:
Q  162 ttttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  5409162 ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaact 5409078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 2171644 - 2171532
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  2171644 aagctaatttcttgtaaccc--tttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 2171547  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  2171546 cgaactgggtgaaca 2171532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 5043377 - 5043491
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||  || ||||||||||||||||||||||||| |||     
T  5043377 aatcttggagaaccaaaagagagggctcttgggaaaagggttggtgcctttt-gggaagattcatggggttgggaaacacatgagtggagagtcttttgt 5043475  T
Q  118 gagcaacttgggtgag 133  Q
    |||||| |||||||||    
T  5043476 gagcaatttgggtgag 5043491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 30834649 - 30834545
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  30834649 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 30834551  T
Q  240 cgaact 245  Q
    ||||||    
T  30834550 cgaact 30834545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 33160465 - 33160381
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagta 225  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  33160465 aagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatggtggattggagagatcaatctctcctccagagta 33160381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 412158 - 412270
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||   ||||||||    
T  412158 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggaccg 412257  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  412258 aactgggtgaaca 412270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 3072871 - 3072759
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||   ||||||||    
T  3072871 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggaccg 3072772  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  3072771 aactgggtgaaca 3072759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 603499 - 603384
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| | ||| |||||||||||||||| ||||||||||  || |||||||||||||||||||| |||  |||     
T  603499 aatcttggagaaccaaaagagggggctcttgaggaaagggttggtgccttttggagaagattcatggggttgggaaacacatgagtggagtgtcctttgt 603400  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  603399 gagcaacttgggtgag 603384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 21593415 - 21593530
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||  || ||| ||||||||||||||||||||  ||      
T  21593415 aatcttggagaaccaaaagagggggctcttggggaaagggttggtgccttttggagaagattcatggggttggaaaacacatgagtggagagtcattttt 21593514  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  21593515 gagcaacttgggtgag 21593530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 3039028 - 3038927
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatta-tagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||| |||||||||||||||||||||  |||| |||||||||||||||||||| ||| ||||||||||||||||| ||||||||| ||||| ||||    
T  3039028 gtgagctttttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttaatagtggattggagagattaatctctcccccagattagg 3038930  T
Q  228 tca 230  Q
    |||    
T  3038929 tca 3038927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 17762736 - 17762853
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga--agattcataggat-gggaaacacatgagtggagagtctatt 115  Q
    |||| |||| ||||||||||||||||||||| ||||| | ||||||||||||||||   |||||||| || | |||||||||||||||||||||||| ||    
T  17762736 aatcttggagaaccaaaagagggggctcttgtgaaaaggtttggtgccttttgggggttagattcatggggttgggaaacacatgagtggagagtctttt 17762835  T
Q  116 gagagcaacttgggtgag 133  Q
    | ||||||||||||||||    
T  17762836 gggagcaacttgggtgag 17762853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 3809128 - 3809012
Alignment:
Q  19 aatcatggataaccaaaagaggggg-ctcttgggaaaaaggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattg 116  Q
    |||| |||| ||||||||||||||| |||||| ||||| ||||||| |||||||| |||||||||| || | |||||||||||||||||||||||  |||    
T  3809128 aatcttggagaaccaaaagaggggggctcttgtgaaaagggttggttccttttggagaagattcatggggttgggaaacacatgagtggagagtcatttg 3809029  T
Q  117 agagcaacttgggtgag 133  Q
     ||||||||||||||||    
T  3809028 tgagcaacttgggtgag 3809012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 16452442 - 16452329
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   |||  |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  16452442 aagctaatttcttgtaaccc-tttcatatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 16452344  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  16452343 cgaactgggtgaaca 16452329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 24 - 133
Target Start/End: Original strand, 17757836 - 17757948
Alignment:
Q  24 tggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga--agattcataggat-gggaaacacatgagtggagagtctattgagag 120  Q
    |||| |||||||| |||||||||||| ||||| ||||||||| ||||||||   |||||||| || | |||||||||||||||||||||||| ||| |||    
T  17757836 tggagaaccaaaatagggggctcttgtgaaaagggttggtgcattttgggggttagattcatggggttgggaaacacatgagtggagagtcttttgtgag 17757935  T
Q  121 caacttgggtgag 133  Q
    |||||||||||||    
T  17757936 caacttgggtgag 17757948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 164 - 362
Target Start/End: Original strand, 9572667 - 9572868
Alignment:
Q  164 ttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaac-atttctt 260  Q
    ||||| |||||||| |||||| |||| ||||||||||| |||||||||||||| ||  ||||||||||||  ||| | |||||| | | ||  |||||||    
T  9572667 ttgtaactctttgttaagaacccattgatagtggattgcagagatcaatctctactttagagtaggtcatcattgaaacgaactgggtaaaatatttctt 9572766  T
Q  261 ggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatctagattgttg 360  Q
    | ||||||||||||||||||         ||||| | ||| ||||| || ||||||||| |||||||||||||| |||||||| |||||||||||| |||    
T  9572767 gatgttgttatcttttctctcgtgtctttatcttatctattctttgattcgattgtggtatttctatgcacttggtttctagattagatctagattattg 9572866  T
Q  361 tt 362  Q
    ||    
T  9572867 tt 9572868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 2973358 - 2973243
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||  || |||||||||||||| || ||||||  |||     
T  2973358 aatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgcttttttgggaagattcatggggttgggaaacacatgaatgcagagtcatttgt 2973259  T
Q  118 gagcaacttgggtgag 133  Q
    || |||||||||||||    
T  2973258 gaacaacttgggtgag 2973243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 26830543 - 26830432
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||||| | ||||||||||||||||||||||||||||| ||||||||||  || ||||||||| ||||| | ||||||  |||     
T  26830543 aatcttggagaaccaaaagaggagtctcttgggaaaaaggttggtgccttttggagaagattcatggggttgggaaacagatgagcgcagagtcatttgt 26830444  T
Q  118 gagcaacttggg 129  Q
    ||||||||||||    
T  26830443 gagcaacttggg 26830432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 6097533 - 6097451
Alignment:
Q  173 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||||||||| | ||||||    
T  6097533 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6097451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 16569107 - 16569180
Alignment:
Q  172 ctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||  |||||||||||||    
T  16569107 ctttgtaagaactcattgatagtggattggagagatcaatctctcctccagattaggtca-agttggaccgaact 16569180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 130 - 228
Target Start/End: Original strand, 4045467 - 4045566
Alignment:
Q  130 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||| || |||||||| |||||||||||||||||||||| ||| | ||| ||||||    
T  4045467 tgagcttgttgaagctaatttcttgtaa-tcattttatatctctttgtaaataactcattgatagtggattggagagatcaatttctaccccaaagtagg 4045565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 16578632 - 16578518
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||    
T  16578632 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttgg 16578535  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  16578534 accgaactgggtgaaca 16578518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 16616748 - 16616862
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||    
T  16616748 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttgg 16616845  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  16616846 accgaactgggtgaaca 16616862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 16653166 - 16653280
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||    
T  16653166 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccagagtaggtcaagtttgg 16653263  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  16653264 accgaactgggtgaaca 16653280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 16554923 - 16555037
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| |||||||||| |||||||||   ||||    
T  16554923 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttgg 16555020  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  16555021 accgaactgggtgaaca 16555037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 16631479 - 16631593
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||| |||||||||| |||||||||   ||||    
T  16631479 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtgcaaactctcctccaaagtaggtcaagtttgg 16631576  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  16631577 accgaactgggtgaaca 16631593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 25073611 - 25073748
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||||||||| |||||| ||| |||||||   |||||||||||| ||||| ||||||||| |||||||||| |||| ||||||||||| | || | |||    
T  25073611 gtgagcttgttaaagctattttattgtaaccc-ttttgtatctctatgtaaagaactcattgatagtggattagagaaatcaatctctcattcaaattag 25073709  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    || |||||| |||  |||||| | |||||||||||||||    
T  25073710 gttattgttagactaaactaggtaaacatttcttggtgt 25073748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 27647915 - 27648028
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||| |||||||||||||||| |||   |||||    
T  27647915 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtagatcaagtttgga 27648012  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| | ||||||    
T  27648013 ccgaactgggtgaaca 27648028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 22425246 - 22425136
Alignment:
Q  19 aatcatggataaccaaaagaggggg--ctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctatt 115  Q
    |||| |||| |||||||||||||||  ||||||||| || ||||||||| |||||||||||||||||  || || |||||||||| ||| ||||||  ||    
T  22425246 aatcttggagaaccaaaagaggggggcctcttgggataagggttggtgcattttggggaagattcatggggttgtgaaacacatgggtgaagagtcattt 22425147  T
Q  116 gagagcaactt 126  Q
     ||||||||||    
T  22425146 aagagcaactt 22425136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 25421396 - 25421474
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  25421396 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25421474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 6027337 - 6027415
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||| ||||   |||||||||||| | ||||||    
T  6027337 aagaactcatttgatagtggattggagagtacaatctctcctccagagtatgtcaagtttggaccgaactgggtgaaca 6027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 13154005 - 13154074
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  13154005 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 13154074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 33342183 - 33342114
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  33342183 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 33342114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 34164948 - 34165017
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  34164948 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 34165017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 254
Target Start/End: Original strand, 34167183 - 34167248
Alignment:
Q  189 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    ||||||||||||||||  ||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  34167183 atagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 34167248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 4641090 - 4641134
Alignment:
Q  210 tctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    ||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  4641090 tctctcctctagagtaggtcattattggaccgaactggataaaca 4641134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 181; Significance: 1e-97; HSPs: 85)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 8359442 - 8359174
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| || |||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8359442 gtgagcttgtttaaactaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 8359343  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||    
T  8359342 tcattgttggaccgaactgggtgaacatttcttggtgttgttatcttttctctactctcattatcttgtttatcctttggttagattgtggttttgctat 8359243  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    |||||||||||||||| |||||||||||||||||| |||||||||   |||||| |||| || |||||||||    
T  8359242 gcacttgttttctagattagatctagattgttgttgttgcttgtg---atttacttttgattgttggttgcc 8359174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 129 - 389
Target Start/End: Original strand, 29608780 - 29609040
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  29608780 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagatatcaatcactcctccagagtagg 29608878  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttc-ta 326  Q
    |||  |||||||||||||   |||| |||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||  ||    
T  29608879 tcaa-gttggaccgaactgagtgaatatttcttggtgttgttatcttttctctactctctttatcttgtttatcctttgcttagattgtggtttttgata 29608977  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggtt 389  Q
    |||||||| |||||| | |||||||||||||||||| ||||||||||| ||||||||||||||    
T  29608978 tgcacttggtttctatattagatctagattgttgttgttgcttgtggttatttacatttggtt 29609040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 3259038 - 3259305
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| |||||||||| |||||||| |||| |||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||    
T  3259038 gtgagcttgtttaagctaatttattgtaactcattt-gtatctctttgtaaaaacccattgatagtggattggagagatcaatctctcctccagagtagg 3259136  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  |||| |||||||| | |||||||||| ||||||||||||||||||| |||       ||||||||||| | |||||| |||||||||||| ||||    
T  3259137 tcaa-gttgaaccgaactgggtgaacatttcctggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctat 3259235  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    || | ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3259236 gcccgtgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattggttg 3259305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 2390325 - 2390596
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcat-tatagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2390325 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaataactcatatatagtggattggagagatcaatctctcctccagagtagg 2390423  T
Q  228 tcattgttggaccgaactagatgaa-catttcttggtgttgttat---cttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    |||  ||||||||||||||| ||||  || ||||||||||||| |    ||||||||||       |||||||||||||||| ||| ||||||||||||     
T  2390424 tca-agttggaccgaactaggtgaataatctcttggtgttgttgtttatttttctctactctctttatcttgtttatccttttgttggattgtggttttg 2390522  T
Q  324 ctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||| || |||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  2390523 ctatacatttgttttctagattagatctagattgttgttattgattgtggttatttacatttggttattggttg 2390596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 129 - 397
Target Start/End: Complemental strand, 4508831 - 4508563
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||| |||||||||||||||||||||  |||| ||||||||||||||||||||||| | |||||||||||||||||||||||| || |||||||||    
T  4508831 gtgagcttattgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgagagtggattggagagatcaatctcttcttcagagtagg 4508733  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    | |  ||||||||||||| | ||||||||||||||||||||||| |||||| |||       ||||||||||||||||||||  ||||||||||| ||||    
T  4508732 ttaa-gttggaccgaactgggtgaacatttcttggtgttgttatattttctttactctctttatcttgtttatcctttggttgaattgtggttttgctat 4508634  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtgg-taatttacatttggttattggttg 397  Q
    ||||||| ||| |||||||| |||| |||||||||||||||||||| | ||||| ||||||||||||||||    
T  4508633 gcacttggtttatagactaggtctatattgttgttattgcttgtggtttatttatatttggttattggttg 4508563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 135 - 397
Target Start/End: Complemental strand, 34310835 - 34310571
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 233  Q
    ||||||||||||||||||||||||  |||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||       
T  34310835 ttgttgaagctaatttcttgtaacacattt-gtatctttttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagt 34310737  T
Q  234 ttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggtttttctatgcact 332  Q
    |||||||||||| | |||||| |  |||||||||||||||||||| |||       |||||||||| ||||||||||  ||||||||||| |||||||||    
T  34310736 ttggaccgaactgggtgaacaatctttggtgttgttatcttttctttactctctttatcttgtttattcctttggttgaattgtggttttgctatgcact 34310637  T
Q  333 tgttttctagactagatctagattgttgttattgcttgtggt-aatttacatttggttattggttg 397  Q
    || ||| |||||||| |||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  34310636 tggtttatagactaggtctatattgttgttattgcttgtggtctatttacatttggttattggttg 34310571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 4510673 - 4510403
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| || |||||||||||||||||||||  |||| |||||||||| |||||||||||| ||||||||||| ||| |||||||||||||  ||||||||    
T  4510673 gtgagtttattgaagctaatttcttgtaacccattt-gtatctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtagg 4510575  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||| ||| | |||||||||||||||||||||||||||||| |||       ||||||||||||| || |||  |||||| |||| ||||    
T  4510574 tcaa-gttggaccgtactgggtgaacatttcttggtgttgttatcttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctat 4510476  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtgg-taatttacatttggttattggttgcc 399  Q
    ||||||| ||| |||||||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  4510475 gcacttgatttatagactaggtctatattgttgttattgcttgtggtttatttacatttggttattggttgcc 4510403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 4512515 - 4512245
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| || |||||||||||||||||||||  |||| |||||||||| |||||||||||| ||||||||||| ||| |||||||||||||  ||||||||    
T  4512515 gtgagtttattgaagctaatttcttgtaacccattt-gtatctctttataagaactcattgatagtggattgaagaaatcaatctctcctgtagagtagg 4512417  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||| ||| | |||||||||||||||||||||||||||||| |||       ||||||||||||| || |||  |||||| |||| ||||    
T  4512416 tcaa-gttggaccgtactgggtgaacatttcttggtgttgttatcttttctttactctcttgatcttgtttatccattagttgaattgtgtttttgctat 4512318  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtgg-taatttacatttggttattggttgcc 399  Q
    ||||||| ||| |||||||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  4512317 gcacttgatttatagactaggtctatattgttgttattgcttgtggtttatttacatttggttattggttgcc 4512245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 129 - 359
Target Start/End: Complemental strand, 22328516 - 22328285
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatta-tagtggattggagagatcaatctctcctccagagtag 226  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| ||| || |||||| ||||||||| ||||||||||||||||| | |||||||    
T  22328516 gtgagcttgttgaagctaatttcttgtaactc-ttttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctctcccctagagtag 22328418  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    ||||||||||||||||||| | | || |||| ||||||||||||||||||||||||       ||||||||||| |||| ||| ||||||||||||  ||    
T  22328417 gtcattgttggaccgaactgggtaaatattttttggtgttgttatcttttctctactctctttatcttgtttattcttttgttcgattgtggttttgtta 22328318  T
Q  327 tgcacttgttttctagactagatctagattgtt 359  Q
    |||||||| ||||| || |||||||||||||||    
T  22328317 tgcacttggtttctcgattagatctagattgtt 22328285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 129 - 374
Target Start/End: Complemental strand, 32358179 - 32357935
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  32358179 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 32358081  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       | ||||||||| | ||| ||  |||||||||||  |||    
T  32358080 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttaacttgtttattccttgcttgaattgtggttttgttat 32357982  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    ||| |||  || || ||||| |||| ||| ||||| |||||||||||    
T  32357981 gcaattggattataaactaggtctatattattgttgttgcttgtggt 32357935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 334
Target Start/End: Complemental strand, 48599459 - 48599255
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||| ||     
T  48599459 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttggaagagctcattgatagtggattggagagatcaatctctcctccagagcaga 48599361  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | ||||||||||||| |||||||||||||||| |||       ||||||||||| | |||||| |||||| ||||| || |    
T  48599360 tca-agttggaccgaactgggtgaacatttcttgatgttgttatcttttctttactctctttatcttgtttattccttggttggattgtagttttgctgt 48599262  T
Q  328 gcacttg 334  Q
    |||||||    
T  48599261 gcacttg 48599255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 22270016 - 22270151
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  22270016 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactgattgatagtggattggagagatcaatctctcctccagagtagg 22270114  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  ||||||||||||| | ||||||| |||||||||    
T  22270115 tca-agttggaccgaactgggtgaacatctcttggtgt 22270151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 128 - 374
Target Start/End: Complemental strand, 6360078 - 6359830
Alignment:
Q  128 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    |||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||| | |||    
T  6360078 ggtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagttgattggagagatcaatctcttccccatattag 6359980  T
Q  227 gtcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttc-tctacnnnnnnnatcttgttta-tcctttggttagattgtggttttt 323  Q
    ||||  |||||| |||||| | | ||| |||||||||||||||||||||||| | | |       |||||||||| |||||  ||| ||||||||||||     
T  6359979 gtca-agttggatcgaactgggtcaacaatttcttggtgttgttatcttttcatttgctttctttatcttgtttattccttaagttggattgtggttttg 6359881  T
Q  324 ctatgcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    ||||||||||| ||| |||||||| | || ||| ||||| |||||||||||    
T  6359880 ctatgcacttggtttatagactaggtatatattattgttgttgcttgtggt 6359830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 23555083 - 23555208
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23555083 gtgaacttgttgaagctaatttcttgtaac-acttttgtacctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 23555181  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  23555182 tcaagtttggaccgaactgggtgaaca 23555208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 34311135 - 34311020
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||  |||||| ||||||||||||||||||||| |||     
T  34311135 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggggaaggttcatggggatggaaaacacatgagtggagagtcttttgt 34311036  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  34311035 gagcaacttgggtgag 34311020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 6432014 - 6432129
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||    
T  6432014 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcgttgatagtggattggagagatcaatctctccttcagagtagg 6432112  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  6432113 tca-agttggaccgaact 6432129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 19502221 - 19502322
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  19502221 gtgagcttgtcaaagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaag 19502319  T
Q  228 tca 230  Q
    |||    
T  19502320 tca 19502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 30024857 - 30024733
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || ||||||||||||||||||||||| |||| ||||||||||    
T  30024857 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatcactcccccagagtagg 30024759  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||  ||||||||||||| ||| ||||    
T  30024758 tca-agttggaccgaactggatcaaca 30024733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 2361097 - 2360836
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| |||| |||||||||||| ||||| ||||    
T  2361097 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatagtggatttgagatatcaatctctcccccagattagg 2360999  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  |||| |||||||| | | || |    ||||||    | |||||||| ||        ||||||||||| | ||||||  |||||||||||  |||    
T  2360998 tca-agttgaaccgaactgggtcaataacctttggtg----tgtcttttctttattctctttatcttgtttattccttggttgaattgtggttttgatat 2360904  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||| |||||||||||| |||| |||| |||| |||||||||   |||||| ||||||| |||||||||    
T  2360903 gcacttggtttctagactaggtctatattgatgttgttgcttgtg---atttac-tttggttgttggttgcc 2360836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 6431720 - 6431835
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||  || ||| ||||||||||||| ||||||| |||     
T  6431720 aatcttggagaaccaaaagagggggctcttggggaaagggttggtgccttttggggaagattcatggggttggaaaacacatgagtgtagagtcttttgt 6431819  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  6431820 gagcaacttgggtgag 6431835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 22269724 - 22269837
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcatagg-atgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  22269724 aatcttggagaaccaaaagagggg-ctcttgggaaagag-ttggtgccttttggggaagattcatggggaggggaaacacatgagtggagagtctattga 22269821  T
Q  118 gagcaacttgggtgag 133  Q
    ||| ||||||||||||    
T  22269822 gagaaacttgggtgag 22269837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 2361377 - 2361275
Alignment:
Q  32 caaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttgggt 130  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |||||||  || ||||||||||||||||||||||||| ||| |||||||||||||    
T  2361377 caaaagagggggctcttgtgaaaagggttggtgccttttggggatgattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttgggt 2361278  T
Q  131 gag 133  Q
    |||    
T  2361277 gag 2361275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 23565186 - 23565085
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  | ||||||||    
T  23565186 gtgagcttgttgaaactaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctctcctagagtagg 23565088  T
Q  228 tca 230  Q
    |||    
T  23565087 tca 23565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 31518946 - 31519081
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctc-ctccagagtag 226  Q
    |||||||| ||||||||| || ||||||||| |||| ||||||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||||    
T  31518946 gtgagcttattgaagctagtt-cttgtaactcattt-gtatctctttgtaagaactcattgacagtggattggagagatcaatctctctccccagagtag 31519043  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    ||||  ||||||||||||| ||| |||||||||||||||    
T  31519044 gtca-agttggaccgaactggataaacatttcttggtgt 31519081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 35853969 - 35854082
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  35853969 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 35854067  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  35854068 cgaactgggtgaaca 35854082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 27347860 - 27347975
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||||    
T  27347860 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattgcagagatcaatctctcccccagattagg 27347958  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  27347959 tca-agttggaccgaact 27347975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 3258745 - 3258860
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||| |||||| |||||||||||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||| ||      
T  3258745 aatcttggagaacaaaaagatggggctcttgggaaaagggttggtgccttttggggaagattcatggggatgggaaacatatgagtggagagtcttttat 3258844  T
Q  118 gagcaacttgggtgag 133  Q
     |||||||||||||||    
T  3258845 tagcaacttgggtgag 3258860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 129 - 263
Target Start/End: Complemental strand, 31105518 - 31105385
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | ||||||||| |||||||||||||||| || ||||||||||||||| ||||||||| | |||||||     
T  31105518 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctttttgtaagaactcattgatggtggattggagagataaatctctccccaagagtaga 31105420  T
Q  228 tcattgttggaccgaactagatgaacatttcttggt 263  Q
    |||  ||||||||||||| | | |||||||||||||    
T  31105419 tca-agttggaccgaactgggtaaacatttcttggt 31105385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 29991108 - 29991221
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||    
T  29991108 aagctaatttcttgtaaccc-ttttgtatctctttctaataactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggac 29991206  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  29991207 cgaactgggtgaaca 29991221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 48491622 - 48491723
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  48491622 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgaaagaactcattgatagtggattggagagatcaatctctcccccagattagg 48491720  T
Q  228 tca 230  Q
    |||    
T  48491721 tca 48491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 2759322 - 2759207
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| ||||    
T  2759322 gtgaacttgttgaagctaatttcttgtaactca-tttatatctctttgtaagaactcattgatagtggattggagatatcaatctcttccccagattagg 2759224  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  2759223 tca-agttggaccgaact 2759207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 4512798 - 4512694
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggatg-ggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| || |  ||||||||||||||||||||||  ||| ||||||||||    
T  4512798 aaccaaaagagggggctcttgggaaag-ggttggtgccttttggggaagattcatggggtttggaaacacatgagtggagagtcatttgtgagcaacttg 4512700  T
Q  128 ggtgag 133  Q
    ||||||    
T  4512699 ggtgag 4512694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 245
Target Start/End: Original strand, 25615900 - 25616012
Alignment:
Q  133 gcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcat 231  Q
    ||||||| ||||||||||||||||||  |||| |||||  |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||     
T  25615900 gcttgtttaagctaatttcttgtaacccattt-gtatcattttgtaagaactcattgatagtggattagagagatcaatctctcctccagagtaggtcaa 25615998  T
Q  232 tgttggaccgaact 245  Q
      ||||||||||||    
T  25615999 gtttggaccgaact 25616012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 31733094 - 31732979
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||| ||||||||||||||||||||  |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| | ||||    
T  31733094 gtgagcttggtgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatactggattggagagatcaatctctcccccaaattagg 31732996  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  31732995 tca-agttggaccgaact 31732979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 48599743 - 48599638
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  || ||| ||| |||||||| |||||||| ||| ||||||||||    
T  48599743 aaccaaaagagggggctcttgtgaaaagggttggtgccttttggggaagattcatggggttggaaaaaacatgagtagagagtcttttgtgagcaacttg 48599644  T
Q  128 ggtgag 133  Q
    ||||||    
T  48599643 ggtgag 48599638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 39731426 - 39731537
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  39731426 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 39731524  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  39731525 aactgggtgaaca 39731537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 47674068 - 47673981
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  47674068 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcc 47673981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 134 - 245
Target Start/End: Original strand, 48489479 - 48489589
Alignment:
Q  134 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 232  Q
    |||||||||||||||||||||||||  |||| ||||||||||| || |||||||| |||||||||||||||||||||||||||| ||||| |||||||      
T  48489479 cttgttgaagctaatttcttgtaacccattt-gtatctctttgcaataactcattcatagtggattggagagatcaatctctcccccagattaggtca-a 48489576  T
Q  233 gttggaccgaact 245  Q
    |||||||||||||    
T  48489577 gttggaccgaact 48489589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 2390031 - 2390146
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||| ||| ||||| |||||||| ||||||||||||||||||  || ||| ||||||||||||||| ||||| |||     
T  2390031 aatcttggaaaaccaaaagagggggctattgcgaaaagggttggtggcttttggggaagattcatggggttggaaaacacatgagtggatagtcttttgt 2390130  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  2390131 gagcaacttgggtgag 2390146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 36146532 - 36146416
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||| |||||  |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| | ||||    
T  36146532 gtgagcttgttgaagctaatttct-gtaacccattt-gtatctctttgtaagaactcattgatagtggatttgagagatcaatctctcccccatattagg 36146435  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  |||||||||||||||    
T  36146434 tca-agttggaccgaactag 36146416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 496108 - 496007
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||| |||  |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||| | | ||||||    
T  496108 gtgagcttgttgaagctaatttcttgcaacccattt-gtatctctttataagaactcattgatagtggattggagagatcaatctctcccctatagtagg 496010  T
Q  228 tca 230  Q
    |||    
T  496009 tca 496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 1113700 - 1113801
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||| ||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | ||||    
T  1113700 gtgagcttgttgaagctaatttcttataaccca-tttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattagg 1113798  T
Q  228 tca 230  Q
    |||    
T  1113799 tca 1113801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 4253654 - 4253518
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||||||||||||||||||||| ||||||   |||| |||||||||| || ||||||||| ||| |||||| |||||||||||||||||  ||||||||    
T  4253654 gtgagcttgttgaagctaatttcatgtaaccc-ttttatatctctttggaaagaactcattgataatggattagagagatcaatctctcccacagagtag 4253556  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||| | |||||||||||||| | |||||||||||||||    
T  4253555 gtcaat-ttggaccgaactaggtaaacatttcttggtgt 4253518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 8153397 - 8153486
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  8153397 aagctaatttcttgtaactcattt-gtatctctttgtaataactcattgatagtggattggagagatcaatctctcccccagattaggtca 8153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 25767074 - 25766984
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||   ||||||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  25767074 aagctaatttcttgtaaccccttttgtatctcttttgaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 25766984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 4509114 - 4509010
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| || | |||||||||||||||||||||||  ||| |||||||||     
T  4509114 aaccaaaagagggagctcttgggaaag-ggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcatttgtgagcaacttt 4509016  T
Q  128 ggtgag 133  Q
    ||||||    
T  4509015 ggtgag 4509010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 4510956 - 4510852
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| || | |||||||||||||||||||||||  ||| |||||||||     
T  4510956 aaccaaaagagggagctcttgggaaag-ggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcatttgtgagcaacttt 4510858  T
Q  128 ggtgag 133  Q
    ||||||    
T  4510857 ggtgag 4510852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 14069946 - 14069843
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||  |||||||    
T  14069946 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtca-agttggac 14069849  T
Q  240 cgaact 245  Q
    ||||||    
T  14069848 cgaact 14069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 14379974 - 14379871
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||  |||||||    
T  14379974 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattaggtca-agttggac 14379877  T
Q  240 cgaact 245  Q
    ||||||    
T  14379876 cgaact 14379871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 41317559 - 41317444
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  |||||||||||||||||   |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  41317559 gtgagcttgtcaaagctaatttcttgtaatccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 41317461  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  41317460 tca-agttggaccgaact 41317444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 4586204 - 4586291
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    |||| ||||||||||||||||| |||||||  ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4586204 gtgaacttgttgaagctaattttttgtaacccatttt-tatctctttgtaagaactcattgatagtggattggagagatcaatctctcc 4586291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 22328819 - 22328703
Alignment:
Q  18 aaatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcata-ggatgggaaacacatgagtggagagtctatt 115  Q
    ||||| |||| |||||||||||||||||||| ||||||  |||||||||||||||||| ||||||||| || ||||||| |||||||| |||||||  ||    
T  22328819 aaatcttggagaaccaaaagagggggctcttaggaaaagagttggtgccttttggggagagattcatagggttgggaaaaacatgagtagagagtcattt 22328720  T
Q  116 gagagcaacttgggtga 132  Q
    | |||||||||||||||    
T  22328719 gtgagcaacttgggtga 22328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 26417359 - 26417446
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    ||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  26417359 gtgagcttgttgaagataatttcttgtaacccattt-gtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcc 26417446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 254
Target Start/End: Complemental strand, 47676255 - 47676137
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 233  Q
    ||||||||||||||||||||||||  |||| ||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||| | |||||||  |    
T  47676255 ttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcaatgatagtggaatggagagatcaatctctcccccatattaggtca-ag 47676158  T
Q  234 ttggaccgaactagatgaaca 254  Q
    |||||||||||| ||| ||||    
T  47676157 ttggaccgaactggatcaaca 47676137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 29608490 - 29608600
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||     |||||||  || ||||||||||||||||||||||||| |||     
T  29608490 aatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttg-----gattcatggggttgggaaacacatgagtggagagtcttttgt 29608584  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  29608585 gagcaacttgggtgag 29608600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 18126687 - 18126788
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||| ||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||  |||||||||||| ||||| ||||    
T  18126687 gtgaacttgttcaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggaggaatcaatctctcccccagactagg 18126785  T
Q  228 tca 230  Q
    |||    
T  18126786 tca 18126788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 41649135 - 41649021
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| | ||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  41649135 gtgagcttgttta-gctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattagg 41649038  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  41649037 tca-agttggaccgaact 41649021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 43864287 - 43864402
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||| ||||||  |||| |||||||||||||| |||| ||| |||||||||||||||||||||||||||  ||||| ||||    
T  43864287 gtgaacttgttgaagctaatttcctgtaacccattt-gtatctctttgtaaaaactaattgatagtggattggagagatcaatctctctcccagattagg 43864385  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  43864386 tca-agttggaccgaact 43864402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 43504266 - 43504178
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||    
T  43504266 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtgaattggagagttcaatctctcctccatagtaggtca 43504178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 20343951 - 20344064
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||  |||||    
T  20343951 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca-agttgg 20344047  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  20344048 accgaactgggtgaaca 20344064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 23344018 - 23344151
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||   ||| |||| ||||||| |||||||||| ||| | ||||||||| || ||||||||  ||||||||||    
T  23344018 gtgagcttgttgaagctaatttcttgtaac-cctttagtatatctttgtgagaactcattgataatagattggagaaattaatctctc--ccagagtagg 23344114  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  |||||||||||| || | |||||||||||||||    
T  23344115 tca-agttggaccgaacaaggtaaacatttcttggtgt 23344151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 8359699 - 8359622
Alignment:
Q  57 ggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattgagagcaacttgggtgag 133  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||||||||||| ||| ||||||||||| ||||    
T  8359699 ggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttggatgag 8359622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 245
Target Start/End: Original strand, 18396367 - 18396477
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 232  Q
    |||||||| ||| ||| |||||||  ||||||||||||||| ||| ||| ||||| |||| ||||||||||||||||||||||||| ||||||||||| |    
T  18396367 ttgttgaacctatttttttgtaac--attttgtatctctttataaagaattcattgatagaggattggagagatcaatctctcctcaagagtaggtcaat 18396464  T
Q  233 gttggaccgaact 245  Q
    | |||||||||||    
T  18396465 ggtggaccgaact 18396477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 24525594 - 24525526
Alignment:
Q  163 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||    
T  24525594 tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccaagattaggtca 24525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 6360331 - 6360216
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcatag-gatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| |  ||||||||||||  |||||||||| | | ||  ||||||||||||||||||||  |||     
T  6360331 aatcttggagaaccaaaagagggggctcttgagaaaaggaatggtgccttttgaagaagattcatggagttgaaaaacacatgagtggagagtcatttgt 6360232  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  6360231 gagcaacttgggtgag 6360216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 141 - 265
Target Start/End: Original strand, 48408857 - 48408984
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   |||||||||||||| | || |||||||| |||||||||||||||| | |||||||||||||||||| ||||   || ||    
T  48408857 aagctaatttcttgtaaccccttttgtatctcttttgaaataactcattgatagtggattggagagtttaatctctcctccagagtatgtcaagtttaga 48408956  T
Q  239 ccgaactagatgaac-atttcttggtgt 265  Q
    ||||||| | ||||| ||||||||||||    
T  48408957 ccgaactgggtgaacaatttcttggtgt 48408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 3904726 - 3904626
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccga 242  Q
    |||||||||||||| | ||||| |||||||||||| ||||||||| |||||| ||  |||||||||||||||||  ||||||||||||||||||||||||    
T  3904726 taatttcttgtaac-acttttgcatctctttgtaaagaactcattgatagtg-atcagagagatcaatctctccctcagagtaggtcattgttggaccga 3904629  T
Q  243 act 245  Q
    |||    
T  3904628 act 3904626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 38671347 - 38671232
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| |||||||||| |||||||  |||| ||||| ||||||||||||||||| ||||||||||| |||||| ||||| ||| ||| | ||||    
T  38671347 gtgagcttgtttaagctaatttattgtaacacattt-gtatcactttgtaagaactcattgatagtggattgaagagataaatctatcccccaaaatagg 38671249  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  38671248 tca-agttggaccgaact 38671232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 24789896 - 24790009
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||  |||||||||| |||| |||| ||||| || ||||||||||||||||  | ||||||||||||||||||||||   |||||    
T  24789896 aagctaatttcttgtaac--attttgtatcccttttgtaaaaactctttgatagtggattggagagtactatctctcctccagagtaggtcaagtttgga 24789993  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| | ||||||    
T  24789994 ccgaactgggtgaaca 24790009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 32358255 - 32358191
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat 83  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  32358255 aatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttggggaaaattcat 32358191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 1560749 - 1560675
Alignment:
Q  173 tttgtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    ||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||||||||||    
T  1560749 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaact 1560675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 4178829 - 4178917
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| ||||||||||| | || |||||||||||||||||| ||||||    
T  4178829 aagctaatttcttgtaaccc-ttttgtatctctttg-aagaactcattgatagtggattgaacagttcaatctctcctccagagcaggtca 4178917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 36574641 - 36574510
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||| ||||||||||||||||||||||||   |||| ||||||||||| ||||||||||| ||||||| |||||||||||||||  ||| | |||||||    
T  36574641 gtgagtttgttgaagctaatttcttgtaac-ccttttatatctctttgtaaagaactcattgatagtggtttggagagatcaatccatcc-ctagagtag 36574544  T
Q  227 gtcattgttggaccgaactagatgaacatttcttg 261  Q
    |||| | ||||||| |||| | | |||||||||||    
T  36574543 gtcaat-ttggaccaaactgggtaaacatttcttg 36574510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 12097984 - 12097875
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||| ||||||||||||||  |||| ||||||||       ||||| || ||||||||||||||||| ||||||||| ||||| |||||    
T  12097984 gtgagcttgttgaagttaatttcttgtaacccattt-gtatctct-------aactctttgtagtggattggagagatgaatctctcccccagattaggt 12097893  T
Q  229 cattgttggaccgaactag 247  Q
    ||  |||||||||||||||    
T  12097892 ca-agttggaccgaactag 12097875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 18388838 - 18388760
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  18388838 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 18388760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 18392274 - 18392196
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  18392274 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 18392196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 31518838 - 31518896
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt 188  Q
    |||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||||    
T  31518838 gtgagcttattgaagctagtttcttgtaactcattt-gtatctctttgtaagaactcatt 31518896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 32060400 - 32060322
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  32060400 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaacttggtgaaca 32060322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 245
Target Start/End: Original strand, 26639432 - 26639484
Alignment:
Q  193 tggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||| ||||||||||||||||||||| |||| |||||||||| ||||||||    
T  26639432 tggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaact 26639484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 5116679 - 5116758
Alignment:
Q  162 ttttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||| ||| || |  ||||||||||||    
T  5116679 ttttgtatctctttgtaaagaactcattgatagtgaattggagagataaatctctcccccatagcaaatcattgttggac 5116758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 6592418 - 6592340
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  6592418 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6592340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 6594636 - 6594558
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  6594636 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 6594558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 30814530 - 30814594
Alignment:
Q  181 aactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||| |||||||||||||||||||||||||||| ||| | |||||||  |||||||||||||    
T  30814530 aactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggaccgaact 30814594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 5513760 - 5513661
Alignment:
Q  162 ttttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttct 259  Q
    |||| ||||||||||||| ||||||||| | | || |||||||| ||||||||| |||||||||||||||| | |||||| ||||| | | |||||||||    
T  5513760 ttttatatctctttgtaaagaactcattgacactgaattggaga-atcaatctcacctccagagtaggtcaat-ttggactgaactgggtaaacatttct 5513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 73
Target Start/End: Complemental strand, 22552846 - 22552804
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggg 73  Q
    ||||||||||||||||||||||  ||| |||||||||||||||||    
T  22552846 aaccaaaagagggggctcttgg--aaacggttggtgccttttggg 22552804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 3e-95; HSPs: 95)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 49199595 - 49199320
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||    
T  49199595 gtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagactagg 49199496  T
Q  228 tcattgttggaccgaactagatgaacatt-tcttggtgttgttatct---tttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    |||| ||||||||||||| | |||||| | ||||||||||||| |||   |||||||||       |||||||||||||||||||||||||||||||||     
T  49199495 tcatggttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcctttggttagattgtggttttg 49199396  T
Q  324 ctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  49199395 ctatgcacttgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattggttgcc 49199320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 43401927 - 43401652
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  43401927 gtgagcttgttgaagctaatttcttgtaacgcattttttatctctttgtaagaactcattgatagtggattggagaaattaatctctcctccagagtagg 43401828  T
Q  228 tcattgttggaccgaactagatgaacatt-tcttggtgttgttatct---tttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    |||| ||||||||||||| | |||||| | ||||||||||||| |||   |||||||||       |||||||||||||||||||||||||||| ||||     
T  43401827 tcatggttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcctttggttagattgtgattttg 43401728  T
Q  324 ctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43401727 ctatgcacttgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattggttgcc 43401652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 46860517 - 46860787
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  46860517 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaataactcattgatagtggattggagagatcaatctttcctccagagtagg 46860615  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||    
T  46860616 tcattgttggaccgaattggatgaacattttttggtgttgttatcttttctttactctctttatcttgtttatcctttggttagattgtggttttgctat 46860715  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||| ||| |||| ||| |||| ||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  46860716 gcacttggtttatagattaggtctatattgttgttgttgtttgtggttatttacatttggttattggttgcc 46860787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 36018895 - 36019159
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||  || ||    
T  36018895 gtgagcttgttgaagttaatttcttgtaactcattttgtatctctttgtaagaactcattatagtggattggagaggtcaatctctcccccag--tatgt 36018992  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatg 328  Q
      ||||||||||||||| ||||||||||| |||||||||||||||||| |||||       |||||||||||||||||||||||||||||||||  ||      
T  36018993 --ttgttggaccgaactggatgaacattttttggtgttgttatcttttttctactctctttatcttgtttatcctttggttagattgtggttttgttaaa 36019090  T
Q  329 cacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||| ||||||||||    
T  36019091 cacttgttttctagattagatctagattgttattgttgcttgtggtaatttacatttgattattggttg 36019159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 43403870 - 43403595
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||| ||||||||||||| || || |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  43403870 gtgagcttgttgaagctcatttcttgtaactcatgttttatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtagg 43403771  T
Q  228 tcattgttggaccgaactagatgaacatt-tcttggtgttgttatct---tttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    |||| ||||||||||||| | |||||| | ||||| ||||||| | |   |||||| ||       |||||||||||||||||||||||||||||||||     
T  43403770 tcatggttggaccgaactgggtgaacaatctcttgatgttgttgtttatttttctccactctctttatcttgtttatcctttggttagattgtggttttg 43403671  T
Q  324 ctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  43403670 ctatgcacttgttttctagattagatctagattgttattattgcttgtggttatttacatttggttattggttgcc 43403595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 41819648 - 41819380
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||  ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41819648 gtgagcttgtctaagctaatttcttgtaacccattttgtatctctttgtaagaactcattatagtggattggagacatcaatctctcctccagagtaggt 41819549  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgttgtta-tcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||||||||||| |||| | ||||||||| |||||||||||| | ||||||||||       ||||||||||||||||||||||||||||||||| ||||    
T  41819548 cattgttggaccaaactgggtgaacatttattggtgttgttatttttttctctactttctttatcttgtttatcctttggttagattgtggttttgctat 41819449  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||| ||| | |||||| |||| ||||||||| |||||||||   |||||| ||||||| |||||||||    
T  41819448 gcacttggtttatggactaggtctatattgttgttgttgcttgtg---atttacttttggttgttggttgcc 41819380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 138 - 399
Target Start/End: Complemental strand, 6095715 - 6095455
Alignment:
Q  138 ttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttg 236  Q
    |||||| ||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||    
T  6095715 ttgaagttaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaa-gttg 6095618  T
Q  237 gaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttgtt 336  Q
    |||||||||   |||||||||||||||||||||||||||||| |||       ||||||||||| | |||||| |||||||||||| |||| |||||  |    
T  6095617 gaccgaactgtgtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatgccttggttggattgtggttttgctatacacttcgt 6095518  T
Q  337 ttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    || |||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  6095517 ttatagactaggtctatattgttgttattgcttgtggttatttacatttgattattggttgcc 6095455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 163 - 397
Target Start/End: Complemental strand, 55302064 - 55301827
Alignment:
Q  163 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 261  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||     
T  55302064 tttgtatctctttgtaagaattcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaacttggtgaacatttctta 55301965  T
Q  262 gtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcactt-gttttctagactagatctagattgttg 360  Q
    ||||||||||||||||| |||       ||||||||||||||||||||  ||||||| ||| |||||||||| |||||||||| |||||||||||||||     
T  55301964 gtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggctttgctatgcacttggttttctagattagatctagattgttt 55301865  T
Q  361 ttattgcttgtgg-taatttacatttggttattggttg 397  Q
    ||||||||||||| | ||| ||||||||||||||||||    
T  55301864 ttattgcttgtggtttattcacatttggttattggttg 55301827  T

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Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 30236168 - 30236413
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  30236168 gtgagcttgttgaagctaatttcttgtaacctattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 30236266  T
Q  228 tcattgttggaccgaactagatgaaca-tttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    |||  ||||||||||||||| | |||| |||||||||||||||||||||||| |||       ||||||||||| | |||||| ||||||| ||||  ||    
T  30236267 tcaa-gttggaccgaactaggtcaacaatttcttggtgttgttatcttttctttactctctttatcttgtttataccttggttggattgtgtttttgtta 30236365  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    |||||||| ||| |||||||| |||| ||||||||| |||||||||||    
T  30236366 tgcacttggtttatagactaggtctatattgttgttgttgcttgtggt 30236413  T

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Target: chr3; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 54593747 - 54594017
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  54593747 gtgagcttgttgaagctaatttattgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtatg 54593845  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggtttttc 324  Q
    |||  |||||||| |||| | |||||||||||||||||||||||||||||| ||  |       |||||||||| |||||   || |||||||||||| |    
T  54593846 tca-agttggaccaaactgggtgaacatttcttggtgttgttatcttttctttagtctctctttatcttgtttattccttgctttggattgtggttttgc 54593944  T
Q  325 tatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    ||||||| || ||| |||||||  |||| ||| ||||||||||||||||| ||||| ||||||||||||||||    
T  54593945 tatgcacatggtttatagactatgtctatattcttgttattgcttgtggttatttatatttggttattggttg 54594017  T

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Target: chr3; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 129 - 278
Target Start/End: Original strand, 46173400 - 46173549
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||    
T  46173400 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaattcattgatagtggattggagagatcaatctctcccccagattagg 46173498  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttct 278  Q
    |||  ||||||||||||||||| ||| |||||||||||||||||||||||||    
T  46173499 tca-agttggaccgaactagatcaacaatttcttggtgttgttatcttttct 46173549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 129 - 278
Target Start/End: Original strand, 4569995 - 4570144
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  4569995 gtgagcttattgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctactccagagtagg 4570093  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttct 278  Q
    | |   |||||||||||| | | ||||||||||||||||||||| ||||||    
T  4570094 tgaagtttggaccgaactgggtcaacatttcttggtgttgttatattttct 4570144  T

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Target: chr3; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 34491255 - 34491379
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34491255 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 34491353  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||  ||||||||||||| | ||||||    
T  34491354 tca-agttggaccgaactgggtgaaca 34491379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 46860220 - 46860335
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcata-ggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||     
T  46860220 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggggaagattcatagggatgggaaacacatgagtggagagtcatttgt 46860319  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  46860320 gagcaacttgggtgag 46860335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 7762308 - 7762433
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7762308 gtgaacttgttgaagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 7762406  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  7762407 tcaagtttggaccgaactgggtgaaca 7762433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 32891147 - 32891282
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||||||| ||||||||| || |||||||    
T  32891147 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcgttgatagtggattggagagataaatctctcccccggagtagg 32891245  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    ||| |||||||||||||| ||| | |||||||||||||    
T  32891246 tca-tgttggaccgaactggataatcatttcttggtgt 32891282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 145 - 336
Target Start/End: Original strand, 40913352 - 40913546
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 243  Q
    ||||||||||||||| |||| ||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| |||||||  |||||||||||    
T  40913352 taatttcttgtaactcattt-gtatctctttgtaagaactcatcgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaa 40913449  T
Q  244 ctagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttgtt 336  Q
    || | | ||| || |||||||||| || ||   |||||||||        ||||||||||||||||||||||||||||||||| |||||||||||||    
T  40913450 ctgggtcaacaatctcttggtgttattgtctatttttctctaatctctttatcttgtttatcctttggttagattgtggttttgctatgcacttgtt 40913546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 28074366 - 28074480
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcatagg-atgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||||||||||||||||||| || ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  28074366 aatcttggagaaccaaaagagggggctcttgggaaatag-ttggtgcgttttggggaagattcatggggatgggaaacacatgagtggagagtctattga 28074464  T
Q  118 gagcaacttgggtgag 133  Q
    ||| ||||| ||||||    
T  28074465 gagaaacttaggtgag 28074480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 43404152 - 43404037
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||| ||||||||||||||||||||  |||     
T  43404152 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggggaagattcatggggttggaaaacacatgagtggagagtcatttgg 43404053  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  43404052 gagcaacttgggtgag 43404037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 54593454 - 54593569
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||| ||||||||||||||||||||| |||     
T  54593454 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtaccttttggggaagattcatggggatggaaaacacatgagtggagagtcttttgt 54593553  T
Q  118 gagcaacttgggtgag 133  Q
    |||||||||| |||||    
T  54593554 gagcaacttgagtgag 54593569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 7764507 - 7764608
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  7764507 gtgaacttgttaaagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatgaatctctcctccagagtagg 7764605  T
Q  228 tca 230  Q
    |||    
T  7764606 tca 7764608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 9581325 - 9581450
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||| ||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9581325 gtgagcttgtttaagctaatttcttttaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 9581423  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  9581424 tcaagtttggaccgaactgggtgaaca 9581450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 40735426 - 40735541
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  40735426 gtgagcttgttgaagctaatttattgtaaccagttt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 40735524  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  40735525 tca-agttggaccgaact 40735541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 6096018 - 6095903
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||  |||     
T  6096018 aatcttggagaaccaaaagagggggctcttttgaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcatttgt 6095919  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  6095918 gagcaacttgggtgag 6095903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 47304001 - 47304115
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||| | |||     
T  47304001 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagt-ttttgt 47304099  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||| ||||||    
T  47304100 gagcaacttaggtgag 47304115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 19684002 - 19683889
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||   ||||||    
T  19684002 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtaggtcaagtttggac 19683904  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  19683903 cgaactgggtgaaca 19683889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 29810911 - 29811012
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  29810911 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 29811009  T
Q  228 tca 230  Q
    |||    
T  29811010 tca 29811012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 45095218 - 45095331
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||   ||||||    
T  45095218 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggac 45095316  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  45095317 cgaactgggtgaaca 45095331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 29813106 - 29813221
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||    
T  29813106 gtgaacttgttgaagctaatttcttgtaacccattt-gcatctctttgtaagaactcatttatagtggattggagagatcaatctctcccccagatttgg 29813204  T
Q  228 tcattgttggaccgaact 245  Q
    ||| ||||||||||||||    
T  29813205 tca-tgttggaccgaact 29813221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 44331588 - 44331703
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||||||   |||| ||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||| ||||    
T  44331588 gtgagcttgttgaagctaatttcttgtaagccattt-gtatctctttgtaagaacttattgatagtggattggagagatcaatctctcccccagattagg 44331686  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  44331687 tca-agttggaccgaact 44331703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 51398857 - 51398972
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||  |||||||| ||||| ||||    
T  51398857 gtgaacttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatagtggattggagagatttatctctcccccagattagg 51398955  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  51398956 tca-agttggaccgaact 51398972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 53921628 - 53921493
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||| |||| |||||  |||||||||||||||| |||||||||||||||||||||||||||| || ||||||     
T  53921628 gtgagcttgttaaagctaatttcttgtaactcattt-gtatcattttgtaagaactcattgatagtggattggagagatcaatctctcccccggagtaga 53921530  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  ||| ||||||||| ||| |||||||||| ||||    
T  53921529 tca-agtttgaccgaactggataaacatttcttagtgt 53921493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 49199890 - 49199778
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||  || ||||||||| ||||||||||||||| |||     
T  49199890 aatcttggagaaccaaaagagggggctattgtgaaaagggttggtgccttttggggaagattcatggggttgggaaacatatgagtggagagtcttttgt 49199791  T
Q  118 gagcaacttgggt 130  Q
    |||||||||||||    
T  49199790 gagcaacttgggt 49199778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 36018600 - 36018715
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||| ||| ||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||| |||||||||  |||     
T  36018600 aatcttggagaaccaaaagagggagcttttgggaaaagggttggtgccttttggggaagatccatggggatgggaaacacatgaatggagagtcatttgt 36018699  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  36018700 gagcaacttgggtgag 36018715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 129 - 372
Target Start/End: Original strand, 47304294 - 47304543
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||| |||| |||||||||  || | ||||||||| ||||||||||||| |||||||||||||||||||||||||||| | ||| ||||    
T  47304294 gtgagcttgttgaagttaatatcttgtaacccatct-gtatctcttcgtaagaactcattgatagtggattggagagatcaatctctccccaagattagg 47304392  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttc------tctacnnnnnnnatcttgtttatcctttggttagattgtggtt 320  Q
    |||  ||| ||||||||| | | ||| |||| |||||||||||||||||||      | | |       ||||||||||| | || ||| ||||||||||    
T  47304393 tca-agtttgaccgaactgggtcaacaatttattggtgttgttatcttttcttttcttttgctttctttatcttgtttattccttagttggattgtggtt 47304491  T
Q  321 tttctatgcacttgttttctagactagatctagattgttgttattgcttgtg 372  Q
    || ||||||||||| ||| |||||||| |||| ||| ||||| |||||||||    
T  47304492 ttgctatgcacttggtttatagactaggtctatattattgttgttgcttgtg 47304543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 760890 - 760991
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  760890 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 760988  T
Q  228 tca 230  Q
    |||    
T  760989 tca 760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 16499075 - 16499187
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||||||||||| ||  ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  16499075 agcttgttgaagctaatttcttgttacccattta-tatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta 16499173  T
Q  231 ttgttggaccgaact 245  Q
      |||||||||||||    
T  16499174 -agttggaccgaact 16499187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 37408513 - 37408602
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  37408513 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtaggtca 37408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 22835127 - 22835012
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  22835127 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctccgccatattagg 22835029  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  22835028 tca-agttggaccgaact 22835012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 40734541 - 40734656
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| |||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  40734541 gtgagcttgttgaacctaatttcttgtaacacattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattagg 40734639  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  40734640 tca-agttggaccgaact 40734656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 801148 - 801260
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  801148 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 801247  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  801248 aactgggtgaaca 801260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 4569699 - 4569815
Alignment:
Q  18 aaatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattg 116  Q
    ||||| |||| || |||||||||||||||||||||||| ||   |||||| ||||||||||||||| || | |||||||||||||||||||||||| |||    
T  4569699 aaatcttggagaatcaaaagagggggctcttgggaaaagggggtgtgcctattggggaagattcatggggttgggaaacacatgagtggagagtcttttg 4569798  T
Q  117 agagcaacttgggtgag 133  Q
     ||||||||||||||||    
T  4569799 tgagcaacttgggtgag 4569815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 40913087 - 40913203
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgcc-ttttggggaagattcat-aggatgggaaacacatgagtggagagtctattg 116  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||  || ||||||||||||||||||||||||  |||    
T  40913087 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgcctttttggagaagattcatggggttgggaaacacatgagtggagagtcatttg 40913186  T
Q  117 agagcaacttgggtgag 133  Q
     |||||| |||||||||    
T  40913187 tgagcaaattgggtgag 40913203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 43402209 - 43402097
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||| ||  |||     
T  43402209 aatcttggagaaccaaaagagggggctcttgagaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagaatcatttgt 43402110  T
Q  118 gagcaacttgggt 130  Q
    || ||||||||||    
T  43402109 gaacaacttgggt 43402097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 34490962 - 34491077
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcatag-gatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| | | ||  ||||||||||||||||||||  |||     
T  34490962 aatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttggagaagattcatggagttgaaaaacacatgagtggagagtcatttgt 34491061  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  34491062 gagcaacttgggtgag 34491077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 44700603 - 44700487
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| ||||||||||||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||| | ||||    
T  44700603 gtgagtttgttgaagctaatttcttgtaacctattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcc-ccacattagg 44700506  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  |||||||||||||||    
T  44700505 tca-agttggaccgaactag 44700487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 55302384 - 55302269
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||| ||||||||||||| ||||||||||||||||| || |||||| ||| ||| ||||||||||||||||| ||| |||     
T  55302384 aatcttggagaaccaaaagagggagctcttgggaaaagggttggtgccttttgggaaaaattcatgaggttggaaaacacatgagtggagattcttttgt 55302285  T
Q  118 gagcaacttgggtgag 133  Q
    |||||||||| |||||    
T  55302284 gagcaacttgagtgag 55302269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 5258257 - 5258144
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||||||||   ||||||    
T  5258257 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctcttctccagagtaggtcaagtttggac 5258159  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  5258158 cgaacttggtgaaca 5258144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 23198052 - 23197939
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   |||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||   ||||||    
T  23198052 aagctaatttcttgtaaccc-ttttgtatctttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggac 23197954  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  23197953 cgaactgggtgaaca 23197939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 23200251 - 23200138
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   |||||||||| |||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||   ||||||    
T  23200251 aagctaatttcttgtaaccc-ttttgtatctttttgtaagaactcattgatagtgaattggagagttcaatctctcctccagagtaggtcaagtttggac 23200153  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  23200152 cgaactgggtgaaca 23200138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 39153486 - 39153385
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||| |||| ||||| |||| |||||||||||| ||||||||||||||||| |||||||||| ||||| ||||    
T  39153486 gtgagcttgtttaagctaatttcttgtaactcattt-gtatccctttataagaactcattgatagtggattggagagaacaatctctcccccagattagg 39153388  T
Q  228 tca 230  Q
    |||    
T  39153387 tca 39153385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 29196511 - 29196396
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  |||||||||||||| |||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  29196511 gtgagcttgtcaaagctaatttcttggaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattagg 29196413  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  29196412 tca-agttggaccgaact 29196396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 41819930 - 41819826
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  || ||||||||||||||||||||| ||  ||| ||||||||||    
T  41819930 aaccaaaagagggggctcttgggaaaagggttggtgcctttt-gggaagattcatggggttgggaaacacatgagtggagactcatttgtgagcaacttg 41819832  T
Q  128 ggtgag 133  Q
     |||||    
T  41819831 agtgag 41819826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 30235874 - 30235989
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||  || ||| ||||||| ||||||||||||  |||     
T  30235874 aatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttggggaatattcatggggttggaaaacacaagagtggagagtcatttgt 30235973  T
Q  118 gagcaacttgggtgag 133  Q
    |||||| |||||||||    
T  30235974 gagcaagttgggtgag 30235989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 5260436 - 5260323
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||| |||||||||   ||||||    
T  5260436 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctcttctccaaagtaggtcaagtttggac 5260338  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  5260337 cgaacttggtgaaca 5260323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 7780114 - 7780028
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  7780114 ctaatttcttgtaacc--ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 7780028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 29682402 - 29682517
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||| ||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||     
T  29682402 gtgagcttgtttaagctaatttcttgtcacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccctagattaga 29682500  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  29682501 tca-agttggaccgaact 29682517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 31314488 - 31314603
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  | ||||||||| ||||||||||||| || |||||||||||||||||||||| ||||| ||| | ||||    
T  31314488 gtgatcttgttgaagctaatttcttgtaaccca-tttgtatctttttgtaagaactctttgatagtggattggagagatcaatatctcccccatattagg 31314586  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  31314587 tca-agttggaccgaact 31314603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 32744561 - 32744446
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||| | |||||||| |||||||||||||| || ||||||||||| |||||| ||||| ||| ||||| ||||    
T  32744561 gtgagcttgtttaagctaatttcttgtaactca-tttgtatcactttgtaagaactctttgatagtggattgaagagataaatctatcccccagattagg 32744463  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  32744462 tca-agttggaccgaact 32744446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 9636236 - 9636150
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||   |||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||    
T  9636236 ctaatttcttgtaaccc-ttttgtatctttttgtaagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtca 9636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 5236581 - 5236481
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||| |||||| ||||||||||||| ||| ||||| ||||    
T  5236581 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgataatggattcgagagatcaatctttcc-ccagattagg 5236484  T
Q  228 tca 230  Q
    |||    
T  5236483 tca 5236481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 131 - 265
Target Start/End: Original strand, 33191877 - 33192009
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||| |||||||||| |   || ||| ||||||| ||||||||||| |||||||||| ||||||||||||||| |||||||| ||||    
T  33191877 gagcttgttgaagctaagttcttgtaacca---ttttatgtctttgtaaagaactcattgatagtggattagagagatcaatctct-ctccagaggaggt 33191972  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||||||||||  |||| | | ||||||| |||||||    
T  33191973 cattgttggacaaaacttggtaaacattttttggtgt 33192009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 9666591 - 9666476
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| | ||| || ||||||||||||| || || ||||||||||||||||||  |||||||| ||||| ||||    
T  9666591 gtgagcttgttgaagctaatttcttgtaactca-tttatacctctttgtaagaattctttgatagtggattggagagattgatctctcccccagattagg 9666493  T
Q  228 tcattgttggaccgaact 245  Q
    | |  |||||||||||||    
T  9666492 t-aaagttggaccgaact 9666476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 35138832 - 35138694
Alignment:
Q  128 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagta 225  Q
    |||||| ||||||||| |||||||||| ||||  |||||||||||||||||| ||||||||| ||||||||| | ||||| ||||||| || | | ||||    
T  35138832 ggtgagtttgttgaagttaatttcttgcaactc-ttttgtatctctttgtaaagaactcattgatagtggatggaagagaacaatctcccc-caaaagta 35138735  T
Q  226 ggtcattgttggaccgaactagatgaacatttcttggtgtt 266  Q
    ||||||||||| ||||||   ||| ||||||||||||||||    
T  35138734 ggtcattgttgaaccgaatcggataaacatttcttggtgtt 35138694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 356
Target Start/End: Original strand, 20937701 - 20937927
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||| ||||||||||||||   ||||||||||||||| || ||||||||| ||| | |||||||||||||||||  ||| ||| |||| ||    
T  20937701 gagcttgttgaagttaatttcttgtaaccc-ttttgtatctctttgaaaagaactcattgata-tagattggagagatcaatcgttcccccaaagtatgt 20937798  T
Q  229 cattgttggaccgaactagatgaac-atttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    ||| ||||||| ||||||| | ||| |||  || |||| ||| ||||||||||||       |||||||||||  ||||||| ||||||| |||| || |    
T  20937799 catagttggacagaactaggtaaacaattattttgtgtggttctcttttctctactctctttatcttgtttattatttggttcgattgtgattttacttt 20937898  T
Q  328 gcacttgttttctagactagatctagatt 356  Q
     |||||| ||  |||| ||||||||||||    
T  20937899 acacttgattaatagattagatctagatt 20937927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 5434287 - 5434181
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcataggatg-ggaaacacatgagtggagagtctattgagagcaactt 126  Q
    ||||||||||||||||||||||||||| |||| |||  |||| |||| |||||||| || |  ||||||||||||||||||||||| ||| |||||| ||    
T  5434287 aaccaaaagagggggctcttgggaaaagggttagtgttttttagggagagattcatggggttaggaaacacatgagtggagagtcttttgtgagcaagtt 5434188  T
Q  127 gggtgag 133  Q
    |||||||    
T  5434187 gggtgag 5434181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 4055874 - 4055773
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccaga-gtaggtcattgttggaccg 241  Q
    ||||||||||||||   ||||||||||||||||||| |||||||| ||||||||||| |||||||  ||||||| ||||| ||||||||||||||| |||    
T  4055874 taatttcttgtaacctcttttgtatctctttgtaagaaactcattgatagtggattgaagagatc--tctctcccccagatgtaggtcattgttgggccg 4055777  T
Q  242 aact 245  Q
    ||||    
T  4055776 aact 4055773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 6716554 - 6716667
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||| ||||||||||||||||||||   |||||    
T  6716554 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttgga 6716651  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| | ||||||    
T  6716652 ccgaactgggtgaaca 6716667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 54635179 - 54635292
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||| ||||||||||||||||||||   |||||    
T  54635179 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttgga 54635276  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| | ||||||    
T  54635277 ccgaactgggtgaaca 54635292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 31340326 - 31340268
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt 188  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||    
T  31340326 gtgagcttgttgaagctaatttcatgtaactca-tttgtatctctttgtaagaactcatt 31340268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 45283071 - 45283145
Alignment:
Q  173 tttgtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    ||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||||||||||    
T  45283071 tttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaact 45283145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 23392034 - 23391919
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||| ||||||||||||||  |||| ||||| ||||| |||||||| || ||||||||||| |||||| ||||||||| ||| | ||||    
T  23392034 gtgagcttgtttaagataatttcttgtaacccattt-gtatcactttgcaagaactctttgatagtggattgtagagataaatctctcccccaaattagg 23391936  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  23391935 tca-agttggaccgaact 23391919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 128 - 282
Target Start/End: Original strand, 39127589 - 39127745
Alignment:
Q  128 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatt-atag-tggattggagagatcaatctctcctccagagt 224  Q
    |||||||||||||||||||||||||| ||  |  |||||||||| || ||||  |||||||| |||  |||||| || |||||||||||||||||||||     
T  39127589 ggtgagcttgttgaagctaatttcttatagttt-ttttgtatcttttcgtaaataactcattgataaatggatttgaaagatcaatctctcctccagagc 39127687  T
Q  225 aggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctac 282  Q
    ||||||||||||||| |||||  || ||| ||||||| | || || | ||||||||||    
T  39127688 aggtcattgttggactgaacttaataaacttttcttgatattattcttttttctctac 39127745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 4075581 - 4075480
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccaga-gtaggtcattgttggaccg 241  Q
    ||||||||||||||   ||||||||| ||||||||| ||||| || ||||||||||||||||||||  |||||| ||||| ||||||||||||||| |||    
T  4075581 taatttcttgtaacctcttttgtatcactttgtaagaaactctttgatagtggattggagagatca--ctctcccccagatgtaggtcattgttgggccg 4075484  T
Q  242 aact 245  Q
    ||||    
T  4075483 aact 4075480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 129 - 235
Target Start/End: Complemental strand, 5434001 - 5433901
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcattatagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||   |||| ||||||||||||| ||||        ||||||||||||||||||||||||||||| ||||||    
T  5434001 gtgagcttgttaaagctaatttcttgtaaccc-ttttatatctctttgtaaagaaccg------gtggattggagagatcaatctctcctccatagtagg 5433909  T
Q  228 tcattgtt 235  Q
    ||||||||    
T  5433908 tcattgtt 5433901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 27305775 - 27305720
Alignment:
Q  189 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  27305775 atagtggattggagagatcaatctctcctccaaagtaggtcaat-ttggaccgaact 27305720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 290 - 374
Target Start/End: Complemental strand, 31340186 - 31340102
Alignment:
Q  290 atcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    ||||||||||| | || ||| |||||||||||| ||||||||||| ||| |||||||| |||| ||| ||||| |||||||||||    
T  31340186 atcttgtttattccttagttggattgtggttttgctatgcacttggtttatagactaggtctatattattgttgttgcttgtggt 31340102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 3617540 - 3617618
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  3617540 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 3617618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 25637517 - 25637586
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||||||||||    
T  25637517 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaact 25637586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 215
Target Start/End: Complemental strand, 51352235 - 51352150
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctc 215  Q
    |||||||| || ||| |||||||||||||| |  ||||||| ||||||||| |||||||| | |||||||| ||||||||||||||||    
T  51352235 gtgagctttttaaagttaatttcttgtaacca--tttgtatttctttgtaataactcattgagagtggatttgagagatcaatctctc 51352150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 31340495 - 31340448
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgcc 66  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||    
T  31340495 aatcttggagaaccaaaagagggggctcttgggaaaatggttggtgcc 31340448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 4598601 - 4598532
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  4598601 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 4598532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 10056309 - 10056378
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10056309 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10056378  T

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Target: chr3; HSP #84
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 10058531 - 10058600
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10058531 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10058600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 10060753 - 10060822
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10060753 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10060822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 10062975 - 10063044
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10062975 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10063044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 10065197 - 10065266
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10065197 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10065266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 10211485 - 10211554
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  10211485 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 10211554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 23410454 - 23410353
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||| | ||||  |||| ||||| |||||||||||||| |  ||| |||||||||||||| ||||||||| ||| | ||||    
T  23410454 gtgagcttgtttaagctaatttcgtataacccattt-gtatcactttgtaagaactcttagataatggattggagagataaatctctcccccaaattagg 23410356  T
Q  228 tca 230  Q
    |||    
T  23410355 tca 23410353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 265
Target Start/End: Complemental strand, 2075140 - 2075065
Alignment:
Q  189 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||||||||| ||||||||||||||||| | |||||||||||  |||||| |||||| | | ||||||||| |||||    
T  2075140 atagtggatttgagagatcaatctctccccgagagtaggtca-agttggatcgaactgggtaaacatttctgggtgt 2075065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 10209265 - 10209319
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||    
T  10209265 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtca 10209319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 4600822 - 4600753
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| |||||||| |||||||||||   ||||||||||||    
T  4600822 aagaactcatttgatagtggattggagagtacaaactctcctctagagtaggtcaagtttggaccgaact 4600753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 374
Target Start/End: Original strand, 5270580 - 5270661
Alignment:
Q  294 tgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatctagat-tgttgttattgcttgtggt 374  Q
    ||||||| |||||||| |||||||||||| |  | |||||| || ||||| ||||||||||| | ||||| |||||||||||    
T  5270580 tgtttattctttggttcgattgtggttttgcattacacttggttgctagattagatctagatctattgttgttgcttgtggt 5270661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 175
Target Start/End: Original strand, 24635306 - 24635345
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctcttt 175  Q
    |||||||||||||||| |||||||| |||||||||||||||    
T  24635306 ttgttgaagctaattttttgtaact-attttgtatctcttt 24635345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 25491091 - 25491003
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctcca 220  Q
    ||||||||||||||| ||||||| | |||  |||||||||||||||| ||||| ||||| |||||| | ||||||||||  |||||||||||    
T  25491091 gagcttgttgaagctgatttcttat-actccttttgtatctctttgtaaagaaatcattgatagtgaagtggagagatc--tctctcctcca 25491003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 173; Significance: 7e-93; HSPs: 103)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 2209756 - 2210031
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  2209756 gtgagcttgttgaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagattaatctctcctccagagtagg 2209855  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    |||| ||||||||||||| | ||||| || ||||||||||||| ||   ||||||||||       |||||||||||| ||||||||||||||||||||     
T  2209856 tcatggttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctctttatcttgtttatcatttggttagattgtggttttg 2209955  T
Q  324 ctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  2209956 ctatgcacttgttttctagattagatctagattgttgttattgtttgtggttatttacatttggttattggttgcc 2210031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 379423 - 379693
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  379423 gtgagcttgttgaagctaatttcttgtaacccattt-gtatcgctttgtaagaactaattgatagtggattggagagatcaatctctcctccagagtagg 379521  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||  |||    
T  379522 tcattgttggaccgaactggatgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttagattgtggttttgttat 379621  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||| ||| |||||||| |||| ||||||||| ||| ||||||| ||||||||||| ||||||||||||    
T  379622 gcacttggtttatagactaggtctatattgttgttgttgtttgtggttatttacatttgattattggttgcc 379693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 41964458 - 41964726
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| |||||||||| |||||||  |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41964458 gtgagcttgtttaagctaatttattgtaacccattttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 41964557  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | ||| |||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||||| ||||    
T  41964558 tca-agttggaccgaactgggtgagcatttcttggtgttgttatcttttctttac--tctctatcttgtttatcctttggttagattgtggttttgctat 41964654  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| || |||||||||    
T  41964655 gcacttgttttctagattagatctagattgttgttattgcttgtggttatttacatttgattgttggttgcc 41964726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 12073435 - 12073680
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  12073435 gtgagcttgttgaagctaatttattgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcttccagagtagg 12073533  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||       ||||||||||| |||||||||||||||||||||  |||    
T  12073534 tcattgttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttagattgtggttttgttat 12073633  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||||    
T  12073634 gcacttggtttctagattagatctagattgttgttgttgcttgtggt 12073680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 129 - 397
Target Start/End: Complemental strand, 50673972 - 50673705
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50673972 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 50673874  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggtttttcta 326  Q
    |||  ||||||||||||||| |||||||||||||||||||||||||||||| |||       |||||||||| |||||   || |||||||||||| |||    
T  50673873 tcaa-gttggaccgaactaggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgctttggattgtggttttgcta 50673775  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    ||||||||  || ||||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||    
T  50673774 tgcacttg-attatagactagatctatattgttgttattgcttatggtgatttacatttggttattggttg 50673705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 40632488 - 40632758
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||| |    
T  40632488 gtgagcttgttgaagctaatttcttgtaacctattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctaaagtaag 40632586  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | | |||||||||||||||||||||||||| | |||       ||||||||||||||||||||  ||||||||||| | ||    
T  40632587 tcaa-gttggaccgaactgggtaaacatttcttggtgttgttatcttttttttactctctttatcttgtttatcctttggttgaattgtggttttgccat 40632685  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtgg-taatttacatttggttattggttgcc 399  Q
    ||||||| | | |||||||| |||| |||||||||||||||||||| | ||||||||||||||||||||||||    
T  40632686 gcacttggtatatagactaggtctatattgttgttattgcttgtggtttatttacatttggttattggttgcc 40632758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 129 - 322
Target Start/End: Original strand, 46703543 - 46703737
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  46703543 gtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaactcatttatagtggattggagagatcaatctctcctccagagtagg 46703642  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttt 322  Q
    |||||||||||||||| | | |||||||||||||||||||||||||||||| |||       |||||||||||| ||||||||||||||||||||    
T  46703643 tcattgttggaccgaattgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcatttggttagattgtggtttt 46703737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 130 - 374
Target Start/End: Original strand, 35662485 - 35662728
Alignment:
Q  130 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  35662485 tgagtttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatatctcctcaagagtaggt 35662583  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatg 328  Q
    ||  |||||||||||||  |||||||||| |||||||||||||||||||| |||       ||||||||||| | |||||| |||||||||||| |||||    
T  35662584 caa-gttggaccgaactgaatgaacattttttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatg 35662682  T
Q  329 cacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    |||||| ||| |||||||  |||| ||||||||| |||||| ||||    
T  35662683 cacttggtttatagactatgtctatattgttgttgttgcttatggt 35662728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 129 - 336
Target Start/End: Original strand, 6655999 - 6656205
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  6655999 gtgaacttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtagg 6656097  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||| | | |||||||||||||||||||||||||||||| |||       |||||||||||||||| ||| |||||||||||| ||||    
T  6656098 tca-agttggaccgaattgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatccttttgttggattgtggttttgctat 6656196  T
Q  328 gcacttgtt 336  Q
    |||||||||    
T  6656197 gcacttgtt 6656205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 131 - 330
Target Start/End: Original strand, 8665453 - 8665651
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 229  Q
    ||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8665453 gagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtc 8665551  T
Q  230 attgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgc 329  Q
    |  |||||||| |||||| || ||||||||||||||||||||||||||| |||       ||||||||||| | |||||| |||||||||||| ||||||    
T  8665552 a-agttggaccaaactaggtgtacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgc 8665650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 129 - 361
Target Start/End: Complemental strand, 26699568 - 26699335
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||   |||||||||    
T  26699568 gtgagcttgttgaagctaatttcttgtaactc-ttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctctatcccagagtag 26699470  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    ||||||||||||||||||| | | || ||||||| |||  |||||||||||| |||       ||||||||||| ||||||||  ||| ||||||| |||    
T  26699469 gtcattgttggaccgaactgggtaaaaatttcttagtgccgttatcttttctttactctctttatcttgtttattctttggttcaattatggttttgcta 26699370  T
Q  327 tgcacttgttttctagactagatctagattgttgt 361  Q
    ||||||||  ||||||| |||||||||||||||||    
T  26699369 tgcacttggattctagattagatctagattgttgt 26699335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 41639469 - 41639737
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||| |||||||||||||||||||||  |||| |||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  41639469 gtgaactttttgaagctaatttcttgtaacccattt-gtatctatttgtaagaactcatcgatagtggattggagagatcaatctctcctccagagtagg 41639567  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  |||||||||||||   |||||||||||||||||||||||| ||||| |||       ||||||||||||||||||||  ||||||||||| ||||    
T  41639568 tca-agttggaccgaactgagtgaacatttcttggtgttgttatcgtttctttactctctttatcttgtttatcctttggttgaattgtggttttgctat 41639666  T
Q  328 gcacttgttttctagactagatctagat---tgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    |||||||  || |||||||| |||| ||     ||||| ||||||||||   |||||||||||||||||||||||    
T  41639667 gcacttg-attatagactaggtctatatatcatttgttgttgcttgtgg---tttacatttggttattggttgcc 41639737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 135 - 372
Target Start/End: Original strand, 33989893 - 33990131
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatta-tagtggattggagagatcaatctctcctccagagtaggtcatt 232  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||  ||||| ||| ||||||||||||||||||||||||||| |||||||||||||||    
T  33989893 ttgttgaagctaatttcttgtaa-tccttttgtatctctttgtaaataactcgttaatagtggattggagagatcaatctctccaccagagtaggtcatt 33989991  T
Q  233 gttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcact 332  Q
     |||||  ||||| | | |||||||||||||||| |||| |||| |||||       ||||||||||| ||||||||  ||| ||| ||| |||||||||    
T  33989992 cttggattgaactgggtaaacatttcttggtgttattatattttttctactctctttatcttgtttattctttggttcaattctggatttgctatgcact 33990091  T
Q  333 tgttttctagactagatctagattgttgttattgcttgtg 372  Q
    || |||||||| |||||||||||||||||| |||||||||    
T  33990092 tggtttctagattagatctagattgttgttgttgcttgtg 33990131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 8648182 - 8648382
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| ||||||||||||||||||| ||||  |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  8648182 gtgagtttgttgaagctaatttcttataacccattt-gtatctctttgtaagaactcattgatattggattggagagatcaatctctcctccagagtagg 8648280  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  |||||||| |||| | |||||||||||||||||||||||||||||| |||       ||||||||||| | |||||| |||||||||||| ||||    
T  8648281 tca-agttggaccaaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctat 8648379  T
Q  328 gca 330  Q
    |||    
T  8648380 gca 8648382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 357
Target Start/End: Original strand, 12119582 - 12119815
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    |||| ||| |||||||||||||||||||||   |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| | |||||||    
T  12119582 gtgaactttttgaagctaatttcttgtaaccc-ttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctctcc-caagagtag 12119679  T
Q  227 gtcattgttggaccgaactagatgaac-atttcttggtgttgt----tatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttt 321  Q
    ||||||||||||||||||||| ||||| |||||||||||||||    ||| ||||||||||       ||||||||||  |||||||  |||||||||||    
T  12119680 gtcattgttggaccgaactaggtgaacaatttcttggtgttgtcatctattttttctctactctctttatcttgtttagtctttggtccgattgtggttt 12119779  T
Q  322 ttctatgcacttgttttctagactagatctagattg 357  Q
    | ||||||||||  |||||||| |||||||||||||    
T  12119780 tgctatgcacttagtttctagattagatctagattg 12119815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 129 - 336
Target Start/End: Complemental strand, 27417090 - 27416884
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  27417090 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattagg 27416992  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  |||||||||||||   | |||| |  |||||||||||||||| ||| |||       ||||||||||| |||||||| |||||||||||| | ||    
T  27416991 tca-agttggaccgaactgagtcaacaatctttggtgttgttatcttgtctttactctctttatcttgtttattctttggttggattgtggttttgccat 27416893  T
Q  328 gcacttgtt 336  Q
    |||||||||    
T  27416892 gcacttgtt 27416884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 129 - 334
Target Start/End: Complemental strand, 50262826 - 50262617
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||||    
T  50262826 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagttgattggagatatcaatctttcctccagagtagg 50262728  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    |||||||||||||||||| | ||||| || ||||||||||||| ||   ||||||||||       ||||||||||| | ||  || ||||||||||||     
T  50262727 tcattgttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctctactctttttatcttgtttattccttacttggattgtggttttg 50262628  T
Q  324 ctatgcacttg 334  Q
    | |||||||||    
T  50262627 ccatgcacttg 50262617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 129 - 333
Target Start/End: Original strand, 26364279 - 26364483
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatta-tagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||    
T  26364279 gtgaacttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattaatagtggattggagagatcaatctctcccccagattagg 26364377  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    |||  ||| ||| ||||| | | ||| ||||||||||||||||||||||||| |||       ||||||||||| | ||| || |||||||||||| |||    
T  26364378 tca-agtttgactgaactgggtcaacaatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgcttggattgtggttttgcta 26364476  T
Q  327 tgcactt 333  Q
    | |||||    
T  26364477 tacactt 26364483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 276
Target Start/End: Original strand, 54883063 - 54883210
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| || |    
T  54883063 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattggagggatcaatctctcctccagattaag 54883161  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatctttt 276  Q
    |||  ||||||||||||| | | ||| |||||||||||||||||||||||    
T  54883162 tca-agttggaccgaactgggtcaacaatttcttggtgttgttatctttt 54883210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 56178762 - 56178637
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  56178762 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 56178664  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  56178663 tcaagtttggaccgaactgggtgaaca 56178637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 8647887 - 8648002
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||| ||||||||||||| |||     
T  8647887 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggggaagattcatggggttgggaaacacaggagtggagagtcttttgt 8647986  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  8647987 gagcaacttgggtgag 8648002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 8665156 - 8665271
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||| ||||||||||||| |||     
T  8665156 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggggaagattcatggggttgggaaacacaggagtggagagtcttttgt 8665255  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  8665256 gagcaacttgggtgag 8665271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 131 - 322
Target Start/End: Original strand, 33089923 - 33090116
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||||||||||||||||||| || |||| | |||||||||||| ||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  33089923 gagcttgttgaagctaatttattataacca-ttttgtatctctctgtaaagaactcattgatagtggattagagagatcaatctctcctctagagtaggt 33090021  T
Q  229 cattgttggaccgaactagatgaacatttc-ttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttt 322  Q
     |||||||||||| ||||||| |||| ||| |||  |||||| |||||||||| |       |||||||||||  ||||||| ||||||||||||    
T  33090022 tattgttggaccggactagataaacaattctttgaagttgttctcttttctctgctctctttatcttgtttattttttggttcgattgtggtttt 33090116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 48893763 - 48893648
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  48893763 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattagg 48893665  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  48893664 tca-agttggaccgaact 48893648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 379128 - 379243
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| || |||||||||||||||||||||||||  |||     
T  379128 aatcttggagaaccaaaagagggggctcttgtgaaaagggtcggtgccttttggggaagattcatgagaatgggaaacacatgagtggagagtcatttgt 379227  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  379228 gagcaacttgggtgag 379243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 9927583 - 9927468
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  9927583 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 9927485  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  9927484 tca-agttggaccgaact 9927468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 26175761 - 26175646
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| |||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  26175761 gtgagcttgttgaaactaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 26175663  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  26175662 tca-agttggaccgaact 26175646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 130 - 265
Target Start/End: Original strand, 31474195 - 31474329
Alignment:
Q  130 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||||| |    
T  31474195 tgagtttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatagttgattggagagataaatctctccaccagagtagat 31474293  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgt 265  Q
    ||  ||||||||||||| | | ||||| |||||||||    
T  31474294 ca-agttggaccgaactgggtaaacatatcttggtgt 31474329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 18 - 133
Target Start/End: Complemental strand, 55085785 - 55085669
Alignment:
Q  18 aaatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattg 116  Q
    ||||| |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||  |||    
T  55085785 aaatcttggagaaccaaaagagggggctcttggggaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcatttg 55085686  T
Q  117 agagcaacttgggtgag 133  Q
     |||||||||| |||||    
T  55085685 tgagcaacttgtgtgag 55085669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 40630733 - 40630848
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||| ||| ||| ||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||     
T  40630733 aatcttggagaaccaaaagagggagcttttgtgaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcttttgt 40630832  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  40630833 gagcaacttgggtgag 40630848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 262
Target Start/End: Complemental strand, 37229847 - 37229714
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| |||| ||||| |||||||   |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||  || ||||||    
T  37229847 gtgagcttgttaaagcaaatttgttgtaaccctttttatatctctttgtaagaactcatttatagtggattggagagatcaatctctccctcatagtagg 37229748  T
Q  228 tcattgttggaccgaactagatgaacatttcttgg 262  Q
    |||  ||||||||||||||| | ||||||||||||    
T  37229747 tca-agttggaccgaactaggtaaacatttcttgg 37229714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 48143086 - 48143187
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||   |||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48143086 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtatctcttcataagaactcattgatagtggattggagagatcaatctctcctccagagtagg 48143184  T
Q  228 tca 230  Q
    |||    
T  48143185 tca 48143187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 50263117 - 50263011
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||     
T  50263117 aatcttggagaaccaaaagagggggctcttggaaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcttttgt 50263018  T
Q  118 gagcaac 124  Q
    |||||||    
T  50263017 gagcaac 50263011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 5429722 - 5429837
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  5429722 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctatttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 5429820  T
Q  228 tcattgttggaccgaact 245  Q
    | |  |||||||||||||    
T  5429821 tta-agttggaccgaact 5429837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 6542304 - 6542169
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| |||||||||||| |    |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||| |||||    
T  6542304 gtgagcttgttgaaactaatttcttgttagcc-ttttgtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagggtagg 6542206  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  ||||||||||||| | | |||||||||||||||    
T  6542205 tca-agttggaccgaactgggtaaacatttcttggtgt 6542169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 29999920 - 29999804
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    |||||||||||||||||||  |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||    
T  29999920 aagctaatttcttgtaactc-ttttgtatcttttttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttgga 29999822  T
Q  239 ccgaactagatgaacatt 256  Q
    ||||||| | ||||||||    
T  29999821 ccgaactgggtgaacatt 29999804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 36463514 - 36463399
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || | |||||||||||||||||||||||||| ||||| ||||    
T  36463514 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgacagtggattggagagatcaatctctcccccagattagg 36463416  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  36463415 tca-agttggaccgaact 36463399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 37740668 - 37740783
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||    
T  37740668 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttgg 37740766  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  37740767 tca-agttggaccgaact 37740783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 46147516 - 46147401
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || ||||||||||||||| |||||||||||| ||| | ||||    
T  46147516 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactctttgatagtggattggagacatcaatctctcccccaaattagg 46147418  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  46147417 tca-agttggaccgaact 46147401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 6655705 - 6655820
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||  || ||||||||||||||||||||||||  ||      
T  6655705 aatcttggagaaccaaaagagggggctcttggggaaagggttggtgccttttggagaagattcatggggttgggaaacacatgagtggagagtcatttct 6655804  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  6655805 gagcaacttgggtgag 6655820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 13992402 - 13992293
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccga 242  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||||||    
T  13992402 ctaatttcttgtaactc-ttttgtatctctt-gtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccga 13992305  T
Q  243 actagatgaaca 254  Q
    ||||| ||||||    
T  13992304 actaggtgaaca 13992293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 26364014 - 26364129
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||||  || ||||||||||||||||||||||||  |||     
T  26364014 aatcttggagaaccaaaagagggggctcttgtgaaaagggttggggccttttggagaagattcatggggttgggaaacacatgagtggagagtcatttgt 26364113  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  26364114 gagcaacttgggtgag 26364129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 46703263 - 46703364
Alignment:
Q  32 caaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttgggt 130  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||| |||||| |||||||||| |||  ||||||||||||    
T  46703263 caaaagagggggctcttgggaaaagggttggtgccttttggggaagattcatggggatgggaaa-acatgaatggagagtcttttgtcagcaacttgggt 46703361  T
Q  131 gag 133  Q
    |||    
T  46703362 gag 46703364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 47038535 - 47038421
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||||||  |  ||||||||| |||||||| ||||||| |||||||||||||||||||||||||||| |||||||| |    
T  47038535 gtgagcttgttgaagctaatttcttgtaatca--tttgtatctgtttgtaaggactcattgatagtggattggagagatcaatctctcccccagagtaag 47038438  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  47038437 tca-agttggaccgaact 47038421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 5370196 - 5370092
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||   ||||||    
T  5370196 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggactagagagatcaatctctcctccagagtaggtcaagtttggac 5370098  T
Q  240 cgaact 245  Q
    ||||||    
T  5370097 cgaact 5370092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 36994567 - 36994682
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||     
T  36994567 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaga 36994665  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  36994666 tca-agttggaccgaact 36994682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 371
Target Start/End: Complemental strand, 55085439 - 55085325
Alignment:
Q  257 tcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatctagatt 356  Q
    |||||||||||||||||||||| |||       ||||||||||| | |||||| |||||||||||| ||||||||||| |||||| | ||||||||||||    
T  55085439 tcttggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctatgcacttggtttctaaattagatctagatt 55085340  T
Q  357 gttgttattgcttgt 371  Q
    |||||||||||||||    
T  55085339 gttgttattgcttgt 55085325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 31495428 - 31495316
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||   ||||||||    
T  31495428 ctaatttcttgtaactctttttgtatctcttttgtaagaactcattgatagttgattggagagttcaatctctcctccagagtaggtcaagtttggaccg 31495329  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  31495328 aactgggtgaaca 31495316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 34570539 - 34570440
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  | || ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  34570539 gtgaacttgttgaagctaatttcttgtaacccaatt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 34570441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 35662191 - 35662306
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||  || ||| |||||||||| ||||||||   |||     
T  35662191 aatcttggagaaccaaaagagggggctcttaggaaaagggttggtgccttttggggaagattcatggggttggaaaacacatgaatggagagttctttgt 35662290  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  35662291 gagcaacttgggtgag 35662306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 50674265 - 50674150
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||||||||||||   ||||| |||||||||||| |||| ||||||||| || | |||||||||||||||||||||||| |||     
T  50674265 aatcttggagaaccaaaagagggggctctaatgaaaagggttggtgccttatgggaaagattcatggggttgggaaacacatgagtggagagtcttttgt 50674166  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  50674165 gagcaacttgggtgag 50674150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 54882769 - 54882884
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||  ||||| |||||||||||||||| ||||||||||  || ||||||||||||||||| ||||||| |||     
T  54882769 aatcttggagaaccaaaagagggggctcttatgaaaagggttggtgccttttggagaagattcatggggttgggaaacacatgagtgtagagtcttttgt 54882868  T
Q  118 gagcaacttgggtgag 133  Q
    ||| ||||||||||||    
T  54882869 gagaaacttgggtgag 54882884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 265
Target Start/End: Original strand, 4588005 - 4588137
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||| | ||||| |    
T  4588005 agcttgttgaagctaatttcttgtaac-ccttttgtatctctttgtaagaactcattgatagtggattggagagaacaatctctcccccataataggtga 4588103  T
Q  231 ttgttggaccgaactagatgaacatttcttggtgt 265  Q
      |||||||| |||| | | |||||||| ||||||    
T  4588104 -agttggaccaaactgggtaaacatttcatggtgt 4588137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 22882870 - 22882740
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatta-tagtggattggagagatcaatctctcctccagagtaggtcatt 232  Q
    ||||||||||||||||||||||||   ||||||||||||| |||| |||||||||  ||||||||| |||| ||||||||| ||  | ||||||||||||    
T  22882870 ttgttgaagctaatttcttgtaaccc-ttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctcccc--cggagtaggtcatt 22882774  T
Q  233 gttggaccgaactagatgaacatttcttggtgtt 266  Q
    ||||||||||||| ||| ||||||||||||||||    
T  22882773 gttggaccgaactggataaacatttcttggtgtt 22882740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 266
Target Start/End: Complemental strand, 22934534 - 22934404
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatta-tagtggattggagagatcaatctctcctccagagtaggtcatt 232  Q
    ||||||||||||||||||||||||   ||||||||||||| |||| |||||||||  ||||||||| |||| ||||||||| ||  | ||||||||||||    
T  22934534 ttgttgaagctaatttcttgtaaccc-ttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaatctcccc--cggagtaggtcatt 22934438  T
Q  233 gttggaccgaactagatgaacatttcttggtgtt 266  Q
    ||||||||||||| ||| ||||||||||||||||    
T  22934437 gttggaccgaactggataaacatttcttggtgtt 22934404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 2209457 - 2209550
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtc 111  Q
    |||| |||| ||||||| |||||| |||||||||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  2209457 aatcttggagaaccaaacgaggggactcttgggaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtc 2209550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 12744038 - 12743935
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||  |||||||    
T  12744038 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggac 12743941  T
Q  240 cgaact 245  Q
    ||||||    
T  12743940 cgaact 12743935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 12745427 - 12745324
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||  |||||||    
T  12745427 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-agttggac 12745330  T
Q  240 cgaact 245  Q
    ||||||    
T  12745329 cgaact 12745324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 33989622 - 33989726
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    |||||||| ||||||||||||||| || |||||||||||||||||  |||||||| |||| |||||||||||||||||||||||  ||| ||||||||||    
T  33989622 aaccaaaatagggggctcttgggagaa-ggttggtgccttttgggagagattcatgggattgggaaacacatgagtggagagtcatttgtgagcaacttg 33989720  T
Q  128 ggtgag 133  Q
    ||||||    
T  33989721 ggtgag 33989726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 265
Target Start/End: Complemental strand, 52095475 - 52095352
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||| ||   ||||||    
T  52095475 aagctaatttcttgtaacccattt-gtatctctttgtaagaaatctttgatagtggattggagagatcaatctctcctccagagtagg-caagtttggac 52095378  T
Q  240 cgaactagatgaacatttcttggtgt 265  Q
    |||||| | |||||| || |||||||    
T  52095377 cgaactgggtgaacaatttttggtgt 52095352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 24969155 - 24969238
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatct 212  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  24969155 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactaattgatagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 41964166 - 41964279
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||| ||  |||||||| ||||||||| || | ||||||||||||||| |||||||| |||     
T  41964166 aatcttggagaaccaaaagagggggctcttgggaaaagggttagt--cttttgggaaagattcatggggttgggaaacacatgagtagagagtcttttgt 41964263  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  41964264 gagcaacttgggtgag 41964279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 112
Target Start/End: Complemental strand, 27417370 - 27417276
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtct 112  Q
    |||| |||| |||||||||| |||||||||||||||  |||||||| ||||||||||||||||||  || |||||||||||||||||||||||||    
T  27417370 aatcttggagaaccaaaagaaggggctcttgggaaaggggttggtgtcttttggggaagattcatggggttgggaaacacatgagtggagagtct 27417276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 397
Target Start/End: Original strand, 46703752 - 46703860
Alignment:
Q  290 atcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatc--tagattgttgttattgcttgtggtaatttacatttgg 387  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  || |||| ||| ||  || ||||||||| ||||||| ||| ||||||||||||    
T  46703752 atcttgtttatcctttggttagattgtggttttgctatgcacttg-attatagaataggtctatatattgttgttgttgcttgaggttatttacatttgg 46703850  T
Q  388 ttattggttg 397  Q
    ||||||||||    
T  46703851 ttattggttg 46703860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 54200031 - 54199930
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||| ||| ||||||||| ||||||| ||||| ||||    
T  54200031 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtgaattagagagatcattctctcccccagattagg 54199933  T
Q  228 tca 230  Q
    |||    
T  54199932 tca 54199930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 12073141 - 12073256
Alignment:
Q  18 aaatcatggataaccaaaagagggggctcttgggaaaaagg-ttggtgccttttggggaagattcataggatgggaaa-cacatgagtggagagtctatt 115  Q
    ||||| |||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| || | ||||| |||||||||| ||||||| ||    
T  12073141 aaatcttggagaaccaaaagagggg-ctcttgggaaaaagggttggtgccttttggg-aagattcatggggttggaaaacacatgagtgaagagtctttt 12073238  T
Q  116 gagagcaacttgggtgag 133  Q
    | ||||||||||||||||    
T  12073239 gtgagcaacttgggtgag 12073256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 12739663 - 12739560
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| |||||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||| |||||||  |||||||    
T  12739663 aagctaatttcttgtaacccattt-gtatctatttgtatgaactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggac 12739566  T
Q  240 cgaact 245  Q
    ||||||    
T  12739565 cgaact 12739560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 45687307 - 45687192
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  ||||||||||||| ||||| |||| |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||| | || |    
T  45687307 gtgagcttgtcaaagctaatttcttataactcattt-gtatctatttgtaagaactcattgatagtggattggagagatctatctctcctccatattatg 45687209  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  45687208 tca-agttggaccgaact 45687192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 3913491 - 3913578
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    ||||| ||||||||||||||||||| ||||  |||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  3913491 gtgagtttgttgaagctaatttcttttaacccattt-gtatatctttgtaagaactcattgatagtggattggagagatcaatctctcc 3913578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 8393448 - 8393562
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  8393448 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgg 8393545  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  8393546 accgaactgggtgaaca 8393562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 8395657 - 8395771
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  8395657 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgg 8395754  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  8395755 accgaactgggtgaaca 8395771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 12744160 - 12744087
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctct 214  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12744160 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctct 12744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 46569965 - 46569851
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| | ||||||||||||||| |||||||||  || ||||||||| ||||||||| ||||| |||     
T  46569965 aatcttggagaaccaaaagagggggctcttgtgaaaaggattggtgccttttgggaaagattcatggggttgggaaacaaatgagtggaaagtcttttgt 46569866  T
Q  118 gagcaacttgggtga 132  Q
    || |||||| |||||    
T  46569865 gaacaacttaggtga 46569851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 52467479 - 52467364
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||| |||||||||  |||| ||||| |||||||| ||||  || |||||||||||||||||||||||||||| | ||| ||||    
T  52467479 gtgagcttgttgaagctaatatcttgtaacccattt-gtatcactttgtaataactttttgatagtggattggagagatcaatctctccccgagattagg 52467381  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  52467380 tca-agttggaccgaact 52467364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 130 - 245
Target Start/End: Original strand, 29254538 - 29254652
Alignment:
Q  130 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||||||||||||| |||||||||| |||  |||| || ||||||||||||||||| || |||||||||||||||||||||||||||  ||| | |||||    
T  29254538 tgagcttgttgaagttaatttcttgcaacccattt-gtgtctctttgtaagaactcgttgatagtggattggagagatcaatctctctcccaaattaggt 29254636  T
Q  229 cattgttggaccgaact 245  Q
    ||  |||||||||||||    
T  29254637 ca-agttggaccgaact 29254652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 144 - 214
Target Start/End: Complemental strand, 12745546 - 12745476
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctct 214  Q
    |||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12745546 ctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctct 12745476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 5871863 - 5871964
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| |||| |||||||||||||  ||||| |||| ||||| |||||||| || |||||||||| ||||||||||||||||| ||||| ||||    
T  5871863 gtgagcttgtttaagcaaatttcttgtaacccatttt-tatcactttgcaagaactctttgatagtggattagagagatcaatctctcccccagattagg 5871961  T
Q  228 tca 230  Q
    |||    
T  5871962 tca 5871964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 12747869 - 12747794
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    ||||||||||||||||||  |||| |||||| |||||| ||||||||| ||||||||||||||||||||||||||||    
T  12747869 aagctaatttcttgtaacccattt-gtatctatttgtatgaactcattgatagtggattggagagatcaatctctcc 12747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 163 - 230
Target Start/End: Complemental strand, 13009536 - 13009468
Alignment:
Q  163 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||| | |||||||    
T  13009536 tttgtatccctttgtaagaactcattgatagtggattggagagatcgatctctcctccaaattaggtca 13009468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 274
Target Start/End: Original strand, 21688292 - 21688437
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| ||||||| |||||||| | |||||||||||| | ||||||||||| ||| || |||||||||||||||| |||| | ||| ||||    
T  21688292 gtgagcttgttgaaactaattttttgtaactca-tttgtatctcttcggaagaactcattgataatgaattggagagatcaatccctcccctagattagg 21688390  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatctt 274  Q
    |||  ||| ||||||| |   | ||| |||||||||||||||||||||    
T  21688391 tca-agttagaccgaattgagtcaacaatttcttggtgttgttatctt 21688437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 261
Target Start/End: Complemental strand, 21703958 - 21703829
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 229  Q
    |||||||||||| | |||||||||| |   |||||||||| ||||||| ||||||||| | ||||||||||||| |||||||| ||| ||| ||||||||    
T  21703958 agcttgttgaagatgatttcttgtaccct-ttttgtatctttttgtaaagaactcattgacagtggattggagatatcaatctatcc-ccatagtaggtc 21703861  T
Q  230 attgttggaccgaactagatgaacatttcttg 261  Q
    |||||| ||||||||| | | |||||||||||    
T  21703860 attgtttgaccgaactgggtaaacatttcttg 21703829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 131 - 243
Target Start/End: Original strand, 34112862 - 34112973
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||| ||||||||||| |||||| | ||||||||||  ||||||| | | |||||||    
T  34112862 gagcttgttgaagctaatttcatgtaac-ccttttgcatctctttgtaaagaactcattgatagtgaagtggagagatc--tctctcccctatagtaggt 34112958  T
Q  229 cattgttggaccgaa 243  Q
    |||||||||||||||    
T  34112959 cattgttggaccgaa 34112973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 5207967 - 5207866
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||||||||||| ||| |||   || | ||||| |||||||||||||||| ||||||||||||| |||||||||||||  ||||||||||    
T  5207967 gtgaacttgttgaagctaatttattgcaaccc-ttgtatatctatttgtaagaactcattgatagtggattggaaagatcaatctctctcccagagtagg 5207869  T
Q  228 tca 230  Q
    |||    
T  5207868 tca 5207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 51337139 - 51337242
Alignment:
Q  162 ttttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttctt 260  Q
    |||||||||||||| |||||||||||| |||||| ||| |||||||||||||||||  || | |||||||  ||||||||||||| | | |||||||| |    
T  51337139 ttttgtatctctttttaagaactcattgatagtgtattagagagatcaatctctcccacacattaggtca-agttggaccgaactgggtaaacatttcgt 51337237  T
Q  261 ggtgt 265  Q
    |||||    
T  51337238 ggtgt 51337242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 282
Target Start/End: Complemental strand, 38811235 - 38811162
Alignment:
Q  210 tctctcctccagagtaggtcattgttggaccgaactagatgaacatttctt-ggtgttgttatcttttctctac 282  Q
    ||||||| | |||||||||||||||||||||||||| | | |||| ||||| ||||||||| ||||||||||||    
T  38811235 tctctccccaagagtaggtcattgttggaccgaactgggtaaacaattcttcggtgttgttctcttttctctac 38811162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 265
Target Start/End: Complemental strand, 44967952 - 44967818
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa-ctcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||| |||||| ||||||||||||| |  ||||||||||||||||| || ||| || | ||| |||| ||| ||||||||||||| ||||| || ||    
T  44967952 gagcttgctgaagccaatttcttgtaacca--tttgtatctctttgtaaaaaactcgttgagagtagattagagggatcaatctctcccccagaataagt 44967855  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgt 265  Q
    || ||||||||||| || | | |||||||||| ||||    
T  44967854 cactgttggaccgacctgggtaaacatttctttgtgt 44967818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7124992 - 7125046
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||    
T  7124992 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtca 7125046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 5136155 - 5136224
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  5136155 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 5136224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 5138380 - 5138449
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  5138380 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 5138449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 44570489 - 44570432
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt 188  Q
    |||||||||||| ||||||||||||||| | |||||||||||||||| |||||||||||    
T  44570489 gagcttgttgaaactaatttcttgtaac-atttttgtatctctttgtaaagaactcatt 44570432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 213
Target Start/End: Original strand, 6677514 - 6677597
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctc 213  Q
    ||||||||||||||||||||||||||||   |||||||| ||||||| ||||| || || ||| |||||| ||||||||||||||    
T  6677514 gagcttgttgaagctaatttcttgtaac-ccttttgtatatctttgtaaagaagtctttgataatggatttgagagatcaatctc 6677597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 129
Target Start/End: Original strand, 33089648 - 33089759
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcataggatgggaaa-cacatgagtggagagtctattg 116  Q
    |||| |||| || ||||||||||||||||||||| |  |||||||| ||||||| || |||||||| || | | ||| |||||||||||||||||  |||    
T  33089648 aatcttggagaatcaaaagagggggctcttgggagag-ggttggtgtcttttggagagagattcatggggtcgaaaaacacatgagtggagagtcatttg 33089746  T
Q  117 agagcaacttggg 129  Q
     ||||||||||||    
T  33089747 tgagcaacttggg 33089759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 34788898 - 34788851
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 179  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  34788898 gagcttgttgaagttaatttcttgtaact-cttttgtatctctttgtaa 34788851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 302 - 372
Target Start/End: Original strand, 6719771 - 6719842
Alignment:
Q  302 ctttggttagattgtggtttttctatgcacttgttttctagactagatctagat-tgttgttattgcttgtg 372  Q
    ||||||||  ||||||||||| || |||||||| |||||||| ||||||||||| ||||||| |||| ||||    
T  6719771 ctttggttttattgtggttttgctttgcacttggtttctagattagatctagatctgttgtttttgcctgtg 6719842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 7122773 - 7122827
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||  ||||||||||||||||  |||||||||||||| |||||||||    
T  7122773 aagaactcatttgatagtggattggagagtacaatctctcctccatagtaggtca 7122827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 311 - 374
Target Start/End: Original strand, 21688470 - 21688533
Alignment:
Q  311 gattgtggtttttctatgcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    ||||||||||||  |||||| ||| ||| ||||||||||||| ||| ||||| |||||||||||    
T  21688470 gattgtggttttgttatgcatttgatttatagactagatctatattattgttgttgcttgtggt 21688533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 290 - 365
Target Start/End: Original strand, 32091645 - 32091719
Alignment:
Q  290 atcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatctagattgttgttatt 365  Q
    ||||||||||| |||| |||  ||||||||||| || | ||||||||| ||||| |||||||| ||||||||||||    
T  32091645 atcttgtttattctttagttcaattgtggtttt-ctttacacttgtttgctagattagatctaaattgttgttatt 32091719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Original strand, 3785850 - 3785891
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttg 71  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  3785850 aaccaaaagagggggctctt-ggaaaagggttggtgccttttg 3785891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 167 - 261
Target Start/End: Complemental strand, 35369534 - 35369440
Alignment:
Q  167 tatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 261  Q
    ||||||||||||| ||||||||| || ||| |||| |||| || ||||||||  || ||||||||||||||||||| ||| || | |||||||||||    
T  35369534 tatctctttgtaaagaactcattgatggtgaattgaagaggtcgatctctcc--catagtaggtcattgttggaccaaacaaggtaaacatttcttg 35369440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 178
Target Start/End: Complemental strand, 55085490 - 55085442
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgta 178  Q
    |||||||||||||||||||||||||||||   | ||||||||||||||||    
T  55085490 gtgagcttgttgaagctaatttcttgtaaacca-tttgtatctctttgta 55085442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 8653349 - 8653385
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaa 55  Q
    |||| |||| |||||||||||||||||||||||||||    
T  8653349 aatcttggagaaccaaaagagggggctcttgggaaaa 8653385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 32091527 - 32091570
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 179  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||    
T  32091527 ttgttgaaactaatttcttgtaact-cttttgtatctctttgtaa 32091570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 265
Target Start/End: Complemental strand, 37755076 - 37754949
Alignment:
Q  139 tgaagctaatttcttgtaactaattttgtatctctttgtaagaa-ctcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttg 236  Q
    ||||| ||||||||||||||   |||| ||||||||| ||| || |||||| ||| ||| ||| |||||||||||||||| ||| ||||||| ||||||     
T  37755076 tgaagataatttcttgtaacctttttt-tatctctttctaaaaaactcattgataatggtttgaagagatcaatctctcccccatagtaggtaattgtta 37754978  T
Q  237 gaccgaactagatgaacatttcttggtgt 265  Q
    |||  |||| ||| || ||||||| ||||    
T  37754977 gactaaactggataaatatttcttagtgt 37754949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 169; Significance: 2e-90; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 40328822 - 40329086
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40328822 gtgagcttgtttaaactaatttcttgtaactcattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 40328921  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |     |||||| |||||   ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||| ||||    
T  40328922 t-----ttggacggaactgagtgaacatttcttggtgttgttatcttttctctactctccttttcttgtttatcctttggttagattgtggttttgctat 40329016  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||| |||||||    
T  40329017 gcacttgttttctagattagatctagactgttgttattgcttgtggttatttacatttggttgttggttg 40329086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 129 - 393
Target Start/End: Original strand, 11384028 - 11384291
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||| ||||||||||| ||| |||||||||||||||||||    
T  11384028 gtgagtttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaacccattgatactggattggagacatcgatctctcctccagagtagg 11384126  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgt-tatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    | |  ||||||||||||| | ||||||||| |||||||||| ||| |||||| |||       ||||||||||||||||||||||||||||||||| |||    
T  11384127 ttaa-gttggaccgaactgggtgaacattttttggtgttgtctat-ttttctttactctctttatcttgtttatcctttggttagattgtggttttgcta 11384224  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattg 393  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11384225 tgcacttgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattg 11384291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 4283567 - 4283811
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  4283567 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctcccctctagagtagg 4283665  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||||||||||||  ||||||||||| ||||    
T  4283666 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctat 4283764  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    ||||||| ||| |||||||| |||| |||||||||||||||||||||    
T  4283765 gcacttggtttatagactaggtctatattgttgttattgcttgtggt 4283811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 18655443 - 18655713
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  18655443 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattagagagatcaatctctcctccaaagtagg 18655541  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggtttttc 324  Q
    |||  ||||||||||||| | ||||||||| |||||||||||||||||||| ||  |       |||||||||| |||||   || |||||||||||| |    
T  18655542 tca-agttggaccgaactgggtgaacattttttggtgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgc 18655640  T
Q  325 tatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||    
T  18655641 tatgcacttggtttatagactagatctatattgttgttattgcttgtgtttatttacatttggttattggttg 18655713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 3772235 - 3772504
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||| || ||||||||||||||||||| |||| |||| |||||||||||| | ||| |||||||||||||||||||||||| ||   |||||||||    
T  3772235 gtgagcttatttaagctaatttcttgtaactcattt-gtatatctttgtaagaatttattgatagtggattggagagatcaatctatctctcagagtagg 3772333  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  |||||||| |||| ||| || ||||||||||| |||||||||||||||||       ||||||||||| ||||||||||||||||||||| ||||    
T  3772334 tcaa-gttggaccaaactggataaatatttcttggtggtgttatcttttctctactctctttatcttgtttattctttggttagattgtggttttgctat 3772432  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||| |||||||| || ||||||||||||||| ||||||||||| |||| | |||||| ||||||||||    
T  3772433 gcacttgatttctagattaaatctagattgttgttgttgcttgtggttattttcttttggtgattggttgcc 3772504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 129 - 374
Target Start/End: Complemental strand, 42435116 - 42434870
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  42435116 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtagg 42435018  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggtttttcta 326  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       |||||||||| |||||   || |||||||||||| |||    
T  42435017 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactttctttatcttgtttattccttgctttggattgtggttttgcta 42434919  T
Q  327 tgcacttgttttctagactagatcta--gattgttgttattgcttgtggt 374  Q
    ||||||||  || |||||||| ||||   ||||||||| |||||||||||    
T  42434918 tgcacttg-attatagactaggtctatctattgttgttgttgcttgtggt 42434870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 129 - 336
Target Start/End: Original strand, 40221788 - 40221994
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| |||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  40221788 gtgagcttgttgaaactaatttcttgtaacccattt-gtatctctttgtaagaactcgttgatagtggattggagagatcaatctctcccccagattagg 40221886  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | | || | |  |||||||||||||||| ||| |||       |||||||| || |||||||| |||||||||||| ||||    
T  40221887 tca-agttggaccgaactgggtcaataatctttggtgttgttatcttgtctttactctctttatcttgttcattctttggttggattgtggttttgctat 40221985  T
Q  328 gcacttgtt 336  Q
    |||||||||    
T  40221986 gcacttgtt 40221994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 336
Target Start/End: Complemental strand, 10930324 - 10930116
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||| ||||||||||||||||||||||  ||||  ||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||    
T  10930324 gtgagctcgttgaagctaatttcttgtaacccattta-tatctctttgtaagaacacattgatagtggattggagagatcaatctctcccccagattagg 10930226  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatcttttc-tctacnnnnnnnatcttgtttatcctttggttagattgtggtttttct 325  Q
    |||  ||||||||||||| | | ||| |||||||||||||||||||||||| | | |       ||||||||||| |||| ||| |||||||||||| ||    
T  10930225 tca-agttggaccgaactgggtcaacaatttcttggtgttgttatcttttcttttgctccctttatcttgtttattcttttgttggattgtggttttgct 10930127  T
Q  326 atgcacttgtt 336  Q
    |||||||||||    
T  10930126 atgcacttgtt 10930116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 42498237 - 42498362
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||   |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  42498237 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtatttctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 42498335  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  42498336 tcaagtttggaccgaactgggtgaaca 42498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 40328528 - 40328643
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||  |||||||||||||||||||| ||||||| |||     
T  40328528 aatcttggagaaccaaaagagggggttcttgggaaaagggttggtgccttttagggaagattcatggggatgggaaacacatgagtgtagagtcttttgt 40328627  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  40328628 gagcaacttgggtgag 40328643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 1292588 - 1292454
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||| |||| || ||||||||| ||||||||||    
T  1292588 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatagtggatttgagaaataaatctctcc-ccagagtagg 1292491  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  ||||||||||||| |   |||||||||||||||    
T  1292490 tca-agttggaccgaactgggcaaacatttcttggtgt 1292454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 42435410 - 42435295
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||  || ||||||||| |||| |||||||||| |||     
T  42435410 aatcttggagaaccaaaagagggggctcttgggaaaaaggttggtgacttttggggaagattcatggggttgggaaacatatgaatggagagtcttttgt 42435311  T
Q  118 gagcaacttgggtgag 133  Q
    |||||||||| |||||    
T  42435310 gagcaacttgagtgag 42435295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 30143383 - 30143476
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccaga 222  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  30143383 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaga 30143476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 3303795 - 3303680
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| || |||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| ||||||    
T  3303795 gtgagcttgtttaacctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccacagtagg 3303697  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  3303696 tca-agttggaccgaact 3303680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 15212829 - 15212944
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||| ||||    
T  15212829 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgataatggattggagagatcaatctctcccccagattagg 15212927  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  15212928 tca-agttggaccgaact 15212944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 27811321 - 27811436
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| ||||| ||||    
T  27811321 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaacccattgatagtggattgaagagatcaatctctcccccagattagg 27811419  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  27811420 tca-agttggaccgaact 27811436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 33352193 - 33352308
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||| |||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  33352193 gtgaacttgttgaacctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 33352291  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  33352292 tca-agttggaccgaact 33352308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 43036466 - 43036581
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||| |||||||||||||| | |||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  43036466 gtgaacttgttgaaactaatttcttgtaattcattt-gtatctctttgtaagaactcattgatagtggatttgagagatcaatctctcctccagattagg 43036564  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  43036565 tca-agttggaccgaact 43036581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 19945473 - 19945383
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||||||||||    
T  19945473 aagctaatttcttgtaaccacttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctcgagagtaggtca 19945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 22976283 - 22976389
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggatgggaaacacatgagtggagagtctattgag 118  Q
    |||| |||| |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| || | | ||||||||||||| ||||||||||| |    
T  22976283 aatcttggagaaccaaaagaggaggctcttggaaaaagggttggtgccttttggggaagattcatggggttgaaaacacatgagtgaagagtctattgtg 22976382  T
Q  119 agcaact 125  Q
    |||||||    
T  22976383 agcaact 22976389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 34256616 - 34256507
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 243  Q
    ||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||   ||||||||||    
T  34256616 taatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaa 34256518  T
Q  244 ctagatgaaca 254  Q
    || | ||||||    
T  34256517 ctgggtgaaca 34256507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 44303910 - 44304023
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||| |  |||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||     
T  44303910 aagctaatttcttgtaa-tccttttgtatctctttttaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggat 44304008  T
Q  240 cgaactagatgaaca 254  Q
    |||||||| ||||||    
T  44304009 cgaactaggtgaaca 44304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 5689314 - 5689429
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| | ||    
T  5689314 gtgagcttgtcaaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagatttgg 5689412  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  5689413 tca-agttggaccgaact 5689429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 40221504 - 40221609
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    |||||||| |||||||||||||||||  |||| ||||||||||||||||||||||  || ||||||||||||||||||||||||| ||| |||||||||     
T  40221504 aaccaaaatagggggctcttgggaaaggggttagtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaactta 40221603  T
Q  128 ggtgag 133  Q
    ||||||    
T  40221604 ggtgag 40221609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 245
Target Start/End: Original strand, 7597659 - 7597774
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||||||||| ||| |  |||||||||||||||||| |||  |||| |||||||||||||||||||||||||||| ||| |||||||    
T  7597659 gagcttgttgaagctaatttcttataa-tccttttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctcccccatagtaggt 7597757  T
Q  229 cattgttggaccgaact 245  Q
    ||||||| |||||||||    
T  7597758 cattgttagaccgaact 7597774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 2627792 - 2627895
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctctt-tgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||| ||||  ||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  2627792 ctaatttcttgcaactctttttgtatctcttgtgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 2627891  T
Q  242 aact 245  Q
    ||||    
T  2627892 aact 2627895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 4731701 - 4731814
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| |||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||| | ||    
T  4731701 gtgagcttgttgaacctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattggagagatcgatctctcccccagattcgg 4731799  T
Q  228 tcattgttggaccgaa 243  Q
    |||  |||||||||||    
T  4731800 tca-agttggaccgaa 4731814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 134 - 243
Target Start/End: Original strand, 4162545 - 4162652
Alignment:
Q  134 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 232  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||| |||||||||| |||||||||||| | |||||||||||      
T  4162545 cttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcattgatag-ggattggagatatcaatctctccccaagagtaggtca-a 4162641  T
Q  233 gttggaccgaa 243  Q
    |||||||||||    
T  4162642 gttggaccgaa 4162652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 17982712 - 17982821
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 243  Q
    ||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||||    
T  17982712 taatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaa 17982810  T
Q  244 ctagatgaaca 254  Q
    || | ||||||    
T  17982811 ctgggtgaaca 17982821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 18141863 - 18141964
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | |||||||| |||||||||||||| || |||||||||||||||||||||||||||| | ||| ||||    
T  18141863 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatcactttgtaagaactctttgatagtggattggagagatcaatctctcccctagattagg 18141961  T
Q  228 tca 230  Q
    |||    
T  18141962 tca 18141964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 31218312 - 31218425
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||   ||||||    
T  31218312 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattagagagttcaatctctcctccagagtaggtcaagtttggac 31218410  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  31218411 cgaactgggtgaaca 31218425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 145 - 254
Target Start/End: Complemental strand, 34254440 - 34254331
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 243  Q
    ||||||||||||||   ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||   ||||||||||    
T  34254440 taatttcttgtaaccc-ttttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctcctctagagtaggtcaagtttggaccgaa 34254342  T
Q  244 ctagatgaaca 254  Q
    || | ||||||    
T  34254341 ctgggtgaaca 34254331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 265
Target Start/End: Original strand, 10015128 - 10015257
Alignment:
Q  133 gcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcat 231  Q
    ||||||||||||||||||||||||||| | ||||||||||||| || ||||||||| |||||||||||||||||| ||||||| ||||| |||||||||     
T  10015128 gcttgttgaagctaatttcttgtaactca-tttgtatctcttt-taggaactcattgatagtggattggagagataaatctct-ctccatagtaggtca- 10015223  T
Q  232 tgttggaccgaactagatgaacatttcttggtgt 265  Q
     ||||||||||||| | | | |||||||||||||    
T  10015224 agttggaccgaactgggtaatcatttcttggtgt 10015257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 12702759 - 12702644
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||   |||||| |||||||||||||||||||| ||| |||||||||||||||||||||||| | ||| ||||    
T  12702759 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtgtctctttgtaagaactcattgatattggattggagagatcaatctctcccctagattagg 12702661  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  12702660 tca-agttggaccgaact 12702644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 40321123 - 40321238
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||| ||||||||||||||  |||  |||||||||||||| ||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  40321123 gtgagcttgttgaagttaatttcttgtaacccatta-gtatctctttgtaaaaactctttgatagtggattggagagatcaatctctcccccagattagg 40321221  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  40321222 tca-agttggaccgaact 40321238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 30291650 - 30291737
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||||||||||| || || ||||||||||||||||||||||||||||    
T  30291650 gtgagcttgttgaagctaatttcttgtaactca-tttgtatcactttgtaagaattctttgatagtggattggagagatcaatctctcc 30291737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 11383735 - 11383850
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||| ||| ||||| ||||||||||||||| |||||||||||  || ||||||| |||| |||||| ||||| |||     
T  11383735 aatcttggagaaccaaaagagggggctattgtgaaaagggttggtgccttttgaggaagattcatggggttgggaaatacataagtggaaagtcttttgt 11383834  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  11383835 gagcaacttgggtgag 11383850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 19491824 - 19491707
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| |||||||||||||||  | ||||||||||||||||||||||| || ||||||||||  |||||||||| ||||| ||| ||||||    
T  19491824 gtgagcttgttgaaactaatttcttgtaaccca-tttgtatctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtagg 19491726  T
Q  228 tcattgttggaccgaactag 247  Q
    ||| | ||||||||||||||    
T  19491725 tca-tattggaccgaactag 19491707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 1746331 - 1746219
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||   ||||||    
T  1746331 aagctaatttcttgtaaccc-ttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccatagtaggtcaagtttggac 1746234  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  1746233 cgaactgggtgaaca 1746219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 3439558 - 3439671
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   |||||    
T  3439558 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgga 3439655  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| ||||||||    
T  3439656 ccgaactggatgaaca 3439671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 44353836 - 44353923
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    |||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||    
T  44353836 gtgaacttgttgaagctaatttcttgtaac-acatttgtatctctttgtaagaactcattgatagtggattgaaaagatcaatctctcc 44353923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 1345496 - 1345379
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| || |||||||||||||||||||||  || | ||||||||||| ||||||||||| ||||||||||| |||| ||||||||||| ||||||||||    
T  1345496 gtgagtttattgaagctaatttcttgtaacccatat-gtatctctttgaaagaactcattgatagtggattgaagagttcaatctctcccccagagtagg 1345398  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  ||| |||||||||||    
T  1345397 tca-agttagaccgaactag 1345379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 265
Target Start/End: Original strand, 8153807 - 8153936
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 233  Q
    ||||||||||||| ||| |||||||  |||||||| |||||||||||||||||| ||||| |||||||||||||||||||| |  ||||||||||||  |    
T  8153807 ttgttgaagctaaattcgtgtaactc-ttttgtatatctttgtaagaactcattgatagttgattggagagatcaatctcttcctcagagtaggtca-ag 8153904  T
Q  234 ttggaccgaactagatgaacatttcttggtgt 265  Q
    |||||||||| | ||| || |||| |||||||    
T  8153905 ttggaccgaaatggataaatattttttggtgt 8153936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 131 - 245
Target Start/End: Complemental strand, 18106201 - 18106091
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 229  Q
    ||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||| ||||| | |||||||||||||||||||| ||||| ||||||    
T  18106201 gagcttgttgaagctaatttcttgtaactca-tttgtatct-tttgtaagaactcattgatagt-gtttggagagatcaatctctcc-ccagaataggtc 18106106  T
Q  230 attgttggaccgaact 245  Q
    |  |||||||||||||    
T  18106105 a-agttggaccgaact 18106091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 245
Target Start/End: Complemental strand, 29796442 - 29796329
Alignment:
Q  134 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa--ctcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||| |||||||||||| | ||||||| || ||||||| ||  |||||| ||| |||||||||||||||||||||||| |||  ||||||||    
T  29796442 cttgttgaagctgatttcttgtaac-atttttgtacctatttgtaaaaaaactcatttataatggattggagagatcaatctctcccccaatgtaggtca 29796344  T
Q  231 ttgttggaccgaact 245  Q
    |||||||||||||||    
T  29796343 ttgttggaccgaact 29796329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 32902292 - 32902191
Alignment:
Q  136 tgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 233  Q
    ||||||||||||||||||||||||  |||||||||||||| ||| ||| ||||| |||||| ||| ||||||||||||||||| || |||||||||||||    
T  32902292 tgttgaagctaatttcttgtaactt-ttttgtatctctttctaaagaattcattgatagtgaatttgagagatcaatctctccccctgagtaggtcattg 32902194  T
Q  234 ttg 236  Q
    |||    
T  32902193 ttg 32902191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 41366736 - 41366625
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||| ||||||||||||| ||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| | ||| |||||||    
T  41366736 agcttgtttaagctaatttcttttaacctattt-gtatccctttgtaagaactcatttatagtggattggagagatcaatctctcc-ctagattaggtca 41366639  T
Q  231 ttgttggaccgaact 245  Q
      |||||||||||||    
T  41366638 -agttggaccgaact 41366625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 261
Target Start/End: Complemental strand, 11712124 - 11711993
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||||||||||||||||||||||| |||   |||| |||||||||||||  |||||||| ||||||||||| ||||||||||||||||  || |||||||    
T  11712124 gagcttgttgaagctaatttcttgaaaccc-ttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggt 11712026  T
Q  229 cattgttggaccgaactagatgaacatttcttg 261  Q
    ||||||||| || || | | | |||||||||||    
T  11712025 cattgttggtcctaattgggtaaacatttcttg 11711993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 245
Target Start/End: Original strand, 6599017 - 6599130
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 229  Q
    ||||||||| ||||||||||||||||||  |||| ||||   |||||||||||||||| |||||||||| ||||||||||||||||| ||| | ||||||    
T  6599017 gagcttgtttaagctaatttcttgtaacccattt-gtatacttttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtc 6599115  T
Q  230 attgttggaccgaact 245  Q
    |  |||||||||||||    
T  6599116 a-agttggaccgaact 6599130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 245
Target Start/End: Original strand, 6674470 - 6674583
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 229  Q
    ||||||||| ||||||||||||||||||  |||| ||||   |||||||||||||||| |||||||||| ||||||||||||||||| ||| | ||||||    
T  6674470 gagcttgtttaagctaatttcttgtaacccattt-gtatacttttgtaagaactcattgatagtggattagagagatcaatctctcccccatattaggtc 6674568  T
Q  230 attgttggaccgaact 245  Q
    |  |||||||||||||    
T  6674569 a-agttggaccgaact 6674583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 44353541 - 44353656
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||| ||||||||||||||||| ||| | |||||||||||||||| ||||||||||  || ||| ||||||||||||||||||||    |     
T  44353541 aatcttggagaactaaaagagggggctcttgtgaagagggttggtgccttttggagaagattcatggggttggaaaacacatgagtggagagtcatcggt 44353640  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  44353641 gagcaacttgggtgag 44353656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 3073981 - 3073870
Alignment:
Q  146 aatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaac 244  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||| |||||||||  ||||| ||||||    
T  3073981 aatttcttgtaac-atttttgtatctctttgtaagaactcattgataatggcttggagagatcaatctctcc-ccatagtaggtca-agttgggccgaac 3073885  T
Q  245 tagatgaacatttct 259  Q
    | | | |||||||||    
T  3073884 tgggtaaacatttct 3073870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 4733784 - 4733864
Alignment:
Q  165 tgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||| |||||||  |||||||||||||    
T  4733784 tgtatctctttgtaagaattcattgatagtggattggagagatcgatctctcccccagattaggtca-agttggaccgaact 4733864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 173 - 245
Target Start/End: Complemental strand, 4743296 - 4743224
Alignment:
Q  173 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||  |||||||||||||    
T  4743296 tttgtaagaactcattgatagtggattggagagatcaatctctcccccaaagtaggtca-agttggaccgaact 4743224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 129
Target Start/End: Complemental strand, 2999939 - 2999828
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaa-gattcatagg-atgggaaacacatgagtggagagtctattg 116  Q
    |||| |||| ||||||||||||||| |||||||| |  |||||||| ||||||||||| ||||||| || ||| ||||||||||||| ||||||| ||||    
T  2999939 aatcttggagaaccaaaagagggggttcttgggatat-ggttggtgtcttttggggaaagattcatggggatgagaaacacatgagtagagagtcaattg 2999841  T
Q  117 agagcaacttggg 129  Q
     ||||||||||||    
T  2999840 tgagcaacttggg 2999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 25690009 - 25690122
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||| ||||||||||||||||||||   |||||    
T  25690009 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttgga 25690106  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| | ||||||    
T  25690107 ccgaactgggtgaaca 25690122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 226 - 373
Target Start/End: Original strand, 10240263 - 10240411
Alignment:
Q  226 ggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatccttt-ggttagattgtggtttttc 324  Q
    ||||||||||||| | |||||| | ||||||||||||| ||||| ||||||||  ||       |||||||||||  ||| |||| |||||||||||| |    
T  10240263 ggtcattgttggatcaaactaggtaaacatttcttggttttgttctcttttcttcactctctttatcttgtttatttttttggttcgattgtggttttgc 10240362  T
Q  325 tatgcacttgttttctagactagatctagattgttgttattgcttgtgg 373  Q
    | | || ||  |||||||| |||||||||||||||||||||| ||||||    
T  10240363 tttacatttcgtttctagattagatctagattgttgttattgtttgtgg 10240411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 2999806 - 2999723
Alignment:
Q  251 aacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttg 334  Q
    ||||||||||| ||||| ||||||||||||||       ||||||||||| |||||||||||||||| |||| |||||||||||    
T  2999806 aacatttcttgatgttgatatcttttctctactctctttatcttgtttattctttggttagattgtgattttgctatgcacttg 2999723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 9765800 - 9765902
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||| |   ||||||| ||||| ||||||| | ||||||    
T  9765800 aagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagct-gctctctcccccagattaggtca-tattggac 9765896  T
Q  240 cgaact 245  Q
    ||||||    
T  9765897 cgaact 9765902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 8965815 - 8965701
Alignment:
Q  130 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||| ||||||||| ||||||||| ||||   |||| |||||||||||||||||||||| |||||| || |||||||| ||||||||| ||| | |||||    
T  8965815 tgagtttgttgaagttaatttcttataaccc-ttttatatctctttgtaagaactcattgatagtgcatcggagagataaatctctcccccatattaggt 8965717  T
Q  229 cattgttggaccgaact 245  Q
    ||  |||||||||||||    
T  8965716 ca-agttggaccgaact 8965701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 1822335 - 1822423
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactca-ttatagtggattggagagatcaatctctcc 216  Q
    ||||||||||||||||||||||||||||||   |||| ||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  1822335 gtgagcttgttgaagctaatttcttgtaac-ccttttatatctatttgtaaataactcactaatagtgaattggagagatcaatctctcc 1822423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 1856780 - 1856868
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactca-ttatagtggattggagagatcaatctctcc 216  Q
    ||||||||||||||||||||||||||||||   |||| ||||| ||||| || |||||| | |||||| |||||||||||||||||||||    
T  1856780 gtgagcttgttgaagctaatttcttgtaac-ccttttatatctatttgtaaataactcactaatagtgaattggagagatcaatctctcc 1856868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 134 - 379
Target Start/End: Original strand, 11137073 - 11137320
Alignment:
Q  134 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa----ctcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||||||||||||||||||| ||||   |||||||||||||||||| ||    |||||| |||||| |||||||| ||   || |||||| | |||||||    
T  11137073 cttgttgaagctaatttcttataaccg-ttttgtatctctttgtaaaaaaaaactcattgatagtgaattggagatat---tc-ctcctc-atagtaggt 11137166  T
Q  229 cattgttggaccgaacta-gatgaacatttcttgg-tgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    |||||||||||||||||| | | || | ||||| | ||||||| | ||||||||||       ||||||||||| | |||||| |||||||||||||||     
T  11137167 cattgttggaccgaactaaggtaaagaattctttgatgttgttttgttttctctactctctttatcttgtttattcattggttcgattgtggtttttctt 11137266  T
Q  327 tgcacttgttttctagactagatctagat-tgttgttattgcttgtggtaattt 379  Q
    |  ||||| || ||||| ||||| ||||| |||| || ||||||||||| ||||    
T  11137267 tatacttgattgctagattagatttagatatgttattgttgcttgtggttattt 11137320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 38863961 - 38864017
Alignment:
Q  189 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    ||||||||||||||||||||||||| ||| || ||||||| |||||| |||||||||    
T  38863961 atagtggattggagagatcaatctcccctgcatagtaggttattgttagaccgaact 38864017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 15290614 - 15290683
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  15290614 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 15290683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 15470983 - 15471052
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  15470983 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 15471052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 42575402 - 42575333
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  42575402 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 42575333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 179
Target Start/End: Complemental strand, 3231921 - 3231872
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 179  Q
    |||||||||||||||||||||| || ||||  |||||||||||||||||||    
T  3231921 gtgagcttgttgaagctaattttttttaac-cattttgtatctctttgtaa 3231872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 129 - 159
Target Start/End: Original strand, 10929842 - 10929872
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaact 159  Q
    |||||||||||||||||||||||||||||||    
T  10929842 gtgagcttgttgaagctaatttcttgtaact 10929872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 10929865 - 10929907
Alignment:
Q  164 ttgtatctctttgtaagaactcatt-atagtggattggagaga 205  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  10929865 ttgtaactctttgtaagaactcattgatagtggattggagaga 10929907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 30909413 - 30909487
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagat 206  Q
    ||||||||| || ||||||||||||||||   |||||||||||||||||  |||| || |||||| |||||||||||    
T  30909413 gagcttgtttaaactaatttcttgtaact--ctttgtatctctttgtaatgactcgttgatagtgaattggagagat 30909487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 4283320 - 4283388
Alignment:
Q  66 cttttggggaagattcataggat-gggaaacacatgagtggagagtctattgagagcaacttgggtgag 133  Q
    |||||||| ||||||||| || | |||||||||||||||||| ||||| ||| ||| ||||||| ||||    
T  4283320 cttttgggaaagattcatggggttgggaaacacatgagtggaaagtcttttgtgagaaacttggttgag 4283388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 10240197 - 10240256
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt 188  Q
    |||||||||||||| |||||||||||||||  || ||| |||||||||| |||||||||||    
T  10240197 gtgagcttgttgaatctaatttcttgtaac-catgttggatctctttgtaaagaactcatt 10240256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 166; Significance: 1e-88; HSPs: 94)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 129 - 386
Target Start/End: Original strand, 47115214 - 47115472
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  ||||||||||||||||||| ||| |||| |||||||||||||||||||||||||| ||||||||||||    
T  47115214 gtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaaaaacccattgatagtggattggagagatcaatctctgctccagagtagg 47115313  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||||||||||||||||| | ||||||||||||| |||||||||||||||||| |       |||||||||||||||| ||||||||||||||||  |||    
T  47115314 tcattgttggaccgaactgggtgaacatttcttgatgttgttatcttttctctgctctttttatcttgtttatccttttgttagattgtggttttgttat 47115413  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttg 386  Q
    |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||    
T  47115414 gcacttgttttctagattagatctagattgttgttattgcttgtgattatttacatttg 47115472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 164 - 397
Target Start/End: Original strand, 28242382 - 28242616
Alignment:
Q  164 ttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggt 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  28242382 ttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactgggtgaacatttcttggt 28242481  T
Q  264 gttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt-ctatgcacttgttttctagactagatctagattgttgtt 362  Q
    |||||||||||||||||||       |||||||||||| ||| ||||||||||||||||| |||| |||||| |||||| | ||||||||||||||||||    
T  28242482 gttgttatcttttctctactctctttatcttgtttatcattttgttagattgtggtttttgctattcacttggtttctaaattagatctagattgttgtt 28242581  T
Q  363 attgcttgtggtaatttacatttggttattggttg 397  Q
     ||||||| ||| ||||||||||||||||||||||    
T  28242582 gttgcttgaggttatttacatttggttattggttg 28242616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 37033198 - 37032924
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||||||   |||||| ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||| ||||||    
T  37033198 gtgagcttgttgaagctaatttcttgtaatccattttgcatctctttgtaagaactcattgatagtggattggagagattaatctcttctccatagtagg 37033099  T
Q  228 tcattgttggaccgaactagatgaacatt-tcttggtgttgttatct--tttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttc 324  Q
    |||| ||||||||||||| | |||||| | | || |||||||| |||  |||||||||       ||||||||||||||||||||||| |||| |||| |    
T  37033098 tcatggttggaccgaactgggtgaacaatctattcgtgttgttgtctattttctctactctctttatcttgtttatcctttggttagagtgtgattttgc 37032999  T
Q  325 tatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37032998 tatgcacttgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattggttgcc 37032924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 129 - 374
Target Start/End: Complemental strand, 47255465 - 47255217
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47255465 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 47255367  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctc---tacnnnnnnnatcttgtttatcctttggttagattgtggtttttc 324  Q
    |||||||||||||||||| | ||||||||||||||||||||||| |||| ||   |||       ||||||||||||||||||||||||||||||||| |    
T  47255366 tcattgttggaccgaactgggtgaacatttcttggtgttgttattttttttcttttactctctttatcttgtttatcctttggttagattgtggttttgc 47255267  T
Q  325 tatgcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    |||||||||| ||| |||||||| |||| ||| ||||| |||||| ||||    
T  47255266 tatgcacttggtttatagactaggtctatattattgttgttgcttatggt 47255217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 29136290 - 29136558
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||| |||  |||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  29136290 gtgagcttgttgaagctaatttcttggaacccattt-gtatttctttgtaagaactcattgatcgtggattggagagatcaatctctcctccagagtagg 29136388  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgt-tatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    |||   |||||||||||||| |||||||||||||||| ||| ||| ||||||||||       ||||||||||||||||||||||||||||||||| |||    
T  29136389 tcaagtttggaccgaactaggtgaacatttcttggtgctgtctat-ttttctctactctctttatcttgtttatcctttggttagattgtggttttgcta 29136487  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||||| ||| |||||||| ||||  |||||||||||||||||||| | ||| ||||||||||||||||    
T  29136488 tgcacttggtttatagactaggtctattttgttgttattgcttgtggttagttatatttggttattggttg 29136558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 37168340 - 37168606
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  37168340 gtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 37168439  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| | |||||| |||||||||||| ||||    
T  37168440 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttggtttgattgtggttttgctat 37168538  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||||  || |||||||| |||| | | ||||| ||||||| ||| ||||||||||||||||||||||    
T  37168539 gcacttg-attatagactaggtctata-tattgttgttgcttgaggttatttacatttggttattggttg 37168606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 129 - 374
Target Start/End: Complemental strand, 31925832 - 31925587
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  31925832 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtagg 31925734  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgt-ttatcctttggttagattgtggtttttcta 326  Q
    |||  ||||||||||||||| ||||||||||||||||||||||| |||||| |||       ||||||| |||| |||||||| |||||||||||| |||    
T  31925733 tcaa-gttggaccgaactaggtgaacatttcttggtgttgttattttttctttactctcgttatcttgtattattctttggttggattgtggttttgcta 31925635  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    |||||||| ||| |||||||| |||| ||| |||||||||||||||||    
T  31925634 tgcacttggtttatagactaggtctatattattgttattgcttgtggt 31925587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 129 - 392
Target Start/End: Original strand, 11348741 - 11349006
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  11348741 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttctaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 11348839  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggtttttc 324  Q
    |||  |||||||||||||   ||||||||||||| |||||||||||||||| ||  |       |||||||||| |||||   || |||||||||||| |    
T  11348840 tca-agttggaccgaactgagtgaacatttcttgatgttgttatcttttctttactctctctttatcttgtttattccttgctttggattgtggttttgc 11348938  T
Q  325 tatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttatt 392  Q
    |||||||||| ||| |||||||| |||| ||||||||||||||||||||| ||||||||||| |||||    
T  11348939 tatgcacttggtttatagactaggtctatattgttgttattgcttgtggttatttacatttgattatt 11349006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 129 - 374
Target Start/End: Complemental strand, 13549125 - 13548880
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| || |||||||| ||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13549125 gtgagcttgttaaacctaatttcatgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 13549027  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| |||||||| |||||||||||| ||||    
T  13549026 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttggattgtggttttgctat 13548928  T
Q  328 gcac-ttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    |||| ||| ||| |||||||| |||| ||| ||||| |||||||||||    
T  13548927 gcactttggtttatagactaggtctatattattgttgttgcttgtggt 13548880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 163 - 399
Target Start/End: Complemental strand, 37876858 - 37876621
Alignment:
Q  163 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 261  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||  |||  |||| |||||||| | |||||||||||||    
T  37876858 tttgtatctctttgtaataactcattgatagtggattgcagagatcaatctctcctccagagtacatcaa-gttgaaccgaactgggtgaacatttcttg 37876760  T
Q  262 gtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatctagattgttgt 361  Q
    ||||||||||||||||| |||       |||||||||||| |||||||  ||||||||||||||||||||||| ||| |||||||| |||| | ||||||    
T  37876759 gtgttgttatcttttctttactctctttatcttgtttatcatttggttgaattgtggtttttctatgcacttggtttatagactaggtctatagtgttgt 37876660  T
Q  362 tattgcttgtgg-taatttacatttggttattggttgcc 399  Q
    | |||||||||| | ||||||||||||||||||||||||    
T  37876659 ttttgcttgtggtttatttacatttggttattggttgcc 37876621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 129 - 384
Target Start/End: Complemental strand, 7482356 - 7482100
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||    
T  7482356 gtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaactcattgatagtgaattggagagatcaatctctccttcagagtagg 7482257  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||||| |||||||||| |||| |||| ||||||||| |||       ||||||||||| | |||||| |||||||||||| ||||    
T  7482256 tca-agttggaccgaactaggtgaacatttcatggtattgtcatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctat 7482158  T
Q  328 gcacttgttttctagactagatc--tagattgttgttattgcttgtggtaatttacatt 384  Q
    |||||||  || |||||||| ||  || ||||||||| ||||||| ||| |||||||||    
T  7482157 gcacttg-attatagactaggtctatatattgttgttgttgcttgaggttatttacatt 7482100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 129 - 322
Target Start/End: Complemental strand, 13547214 - 13547022
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||| |||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13547214 gtgagcttgttgaagctattttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 13547116  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttt 322  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| |||||||| ||||||||||||    
T  13547115 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattctttggttggattgtggtttt 13547022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 129 - 374
Target Start/End: Complemental strand, 42298100 - 42297852
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  42298100 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcctccagagtagg 42298002  T
Q  228 tcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggttttt 323  Q
    |||| ||||||||||||| | ||||| || ||||||||||||| ||   |||||| |||       |||||||||||  ||||||| ||||||| ||||     
T  42298001 tcatggttggaccgaactgggtgaacaatctcttggtgttgttgtctatttttctttac-tcttttatcttgtttattatttggttggattgtgattttg 42297903  T
Q  324 ctatgcacttgttttctagactagatctagattgttgttattgcttgtggt 374  Q
    ||||||||||| ||| |||||| | | || ||| |||||||||||| ||||    
T  42297902 ctatgcacttggtttatagacttggtatatattattgttattgcttatggt 42297852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 131 - 363
Target Start/End: Original strand, 6808497 - 6808730
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||| |||||||||||  |||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |  ||||||||||    
T  6808497 gagcttgttgaagctaacttcttgtaactc-ttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctcttcctcagagtaggt 6808595  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatg 328  Q
     |||||||| ||||||||||| || ||||||||| |||||| | | || |||||       ||||||||||| |||| ||| ||| ||| |||| || |     
T  6808596 tattgttggtccgaactagataaatatttcttggagttgttctttgttttctactctctttatcttgtttatgctttagtttgatagtgattttgcttta 6808695  T
Q  329 cacttgttttctagactagatctagattgttgtta 363  Q
    |||||| ||||||||  ||||||||||||||||||    
T  6808696 cacttggtttctagatcagatctagattgttgtta 6808730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 129 - 330
Target Start/End: Original strand, 19754538 - 19754737
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| ||||    
T  19754538 gtgagcttgttgaagctaatttcttgtaaccga-tttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctccctcagattagg 19754636  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||| | | | |||| || |||||| ||||||||||||| |||       |||||||||||||||| ||| |||||||||||| ||||    
T  19754637 tca-agttggaccgaagtgggtcaacaatttttggtg-tgttatcttttctttactctctttatcttgtttatccttttgttggattgtggttttgctat 19754734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 193657 - 193799
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| ||||    
T  193657 agcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaataactcattgatagtggattggagagatcaatctcttctccagagtatgtca 193755  T
Q  231 ttgttggaccgaactagatgaacatttcttggtgtt-gttatctt 274  Q
      ||||||||||||| | |||||||||||||||||| ||||||||    
T  193756 -agttggaccgaactgggtgaacatttcttggtgttcgttatctt 193799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 129 - 397
Target Start/End: Original strand, 34603619 - 34603874
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  34603619 gtgagcttgtttaagctaatttcttgtaacccattttttatctctttgtaagaactcattgatggtggattgaagagatcaatctctcctccagagtagg 34603718  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||||              |||||||||||||||||| |||       ||||||||||| | |||||| |||||||||||| ||||    
T  34603719 tca-agttggaccgaacta--------------ggtgttgttatcttttctttactctctttatcttgtttattccttggttggattgtggttttgctat 34603803  T
Q  328 gcacttgttttctagactagatc--tagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||||  || |||||||| ||  || |||| ||||  |||||| ||| ||||||||||| ||||||||||    
T  34603804 gcacttg-attatagactaggtctatatattgctgttggtgcttgaggttatttacatttgattattggttg 34603874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 37168046 - 37168161
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||     
T  37168046 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcttttgt 37168145  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  37168146 gagcaacttgggtgag 37168161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 8550912 - 8550787
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8550912 gtgagcttgtttaagctaatttcttgtaactcattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 8550814  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  8550813 tcaagtttggaccgaactgggtgaaca 8550787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 37033492 - 37033377
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||  |||     
T  37033492 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttgaggaagattcatgaggttgggaaacacatgagtggagagtcatttgt 37033393  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  37033392 gagcaacttgggtgag 37033377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 7482650 - 7482534
Alignment:
Q  19 aatcatggataaccaaaagaggggg-ctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattg 116  Q
    |||| |||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||    
T  7482650 aatcttggagaaccaaaagaggggggctcttgggaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcttttg 7482551  T
Q  117 agagcaacttgggtgag 133  Q
     ||||||||||||||||    
T  7482550 tgagcaacttgggtgag 7482534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 131 - 336
Target Start/End: Original strand, 19752731 - 19752932
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtc 229  Q
    ||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| |||| ||||||||||||||||||||||  ||| | ||||||    
T  19752731 gagcttgttgaagctaatttcttgtaaccga-tttgtatctctttgtaagaactcattgatagaggattggagagatcaatctctctcccatattaggtc 19752829  T
Q  230 attgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgc 329  Q
    |  ||||||||||||||| | |||| |  || |   ||||||||||| | |||       |||||||||||||||| ||| |||||||||||| ||||||    
T  19752830 a-agttggaccgaactaggtcaacaatcttttg---tgttatcttttatttactctctttatcttgtttatccttttgttggattgtggttttactatgc 19752925  T
Q  330 acttgtt 336  Q
    |||||||    
T  19752926 acttgtt 19752932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 19754240 - 19754355
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||     
T  19754240 aatcttggaaaaccaagagagggggctcttgtgaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcttttgt 19754339  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  19754340 gagcaacttgggtgag 19754355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 129 - 269
Target Start/End: Original strand, 22079359 - 22079501
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||||||||| |||||||||||||||||| | |||||||||||||||||| ||||||||| ||| |||||||||||||||||| ||||||||| |||||    
T  22079359 gtgagcttgttaaagctaatttcttgtaacca-ttttgtatctctttgtaaagaactcattgatattggattggagagatcaatttctcctccaaagtag 22079457  T
Q  227 gtcattgttggaccgaactagatgaacatttc-ttggtgttgtt 269  Q
    ||||||| |||||| |||| | | |||||||| |||||||||||    
T  22079458 gtcattgctggaccaaacttggtaaacatttctttggtgttgtt 22079501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 28242138 - 28242252
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||  |||     
T  28242138 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgcctttt-gggaagattcataaggttgggaaacacatgagtggagagtcatttgt 28242236  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  28242237 gagcaacttgggtgag 28242252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 37879330 - 37879215
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||  || ||||||||||||||||||||||||| |||     
T  37879330 aatcttggagaacaaaaagagggggctcttgtgaaaaaggttggtgccttttggggaaaattcatggggttgggaaacacatgagtggagagtcttttgt 37879231  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  37879230 gagcaacttgggtgag 37879215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 3189373 - 3189498
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||| |||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3189373 gtgaacttgttgaagctaatttcctgtaactc-ttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtagg 3189471  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  3189472 tcaagtttggaccgaactgggtgaaca 3189498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 3198190 - 3198315
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||| |||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3198190 gtgaacttgttgaagctaatttcctgtaactc-ttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtagg 3198288  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  3198289 tcaagtttggaccgaactgggtgaaca 3198315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 3207029 - 3207154
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||| |||||||  |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3207029 gtgaacttgttgaagctaatttcctgtaactc-ttttgtatctttttgtaagaactcattgatagtggattggagagatcaatctctcatccagagtagg 3207127  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  3207128 tcaagtttggaccgaactgggtgaaca 3207154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 29135997 - 29136111
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggatgggaaacacatgagtggagagtctattgag 118  Q
    |||| |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||| || | ||||| ||||||||||||||| | ||| |    
T  29135997 aatcttggagaaccaaaagaggggactcttgggaaaagggttggtgccttttggggaagattcatggggttggaaaaacatgagtggagagttttttgtg 29136096  T
Q  119 agcaacttgggtgag 133  Q
    |||||||||||||||    
T  29136097 agcaacttgggtgag 29136111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 46064961 - 46065062
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||| ||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  46064961 gtgagctcgttgaagctaatttcttgtaactcatgt-gtatctctttgtaagaactcattcatagtggattggagagatcaatctctcccccagagtagg 46065059  T
Q  228 tca 230  Q
    |||    
T  46065060 tca 46065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 28220351 - 28220236
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  28220351 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 28220253  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  28220252 tca-agttggaccgaact 28220236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 28265679 - 28265564
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||    
T  28265679 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattagg 28265581  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  28265580 tca-agttggaccgaact 28265564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 42298394 - 42298279
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||  || ||||||||||||||||||||||||  |||     
T  42298394 aatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttggagaagattcatggggttgggaaacacatgagtggagagtcatttgc 42298295  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  42298294 gagcaacttgggtgag 42298279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 49918393 - 49918510
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  49918393 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccaaattagg 49918491  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  |||||||||||||||    
T  49918492 tca-agttggaccgaactag 49918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 834292 - 834177
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  834292 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatctatctctcccccagagtagg 834194  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  834193 tca-agttggaccgaact 834177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 3156908 - 3157023
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  3156908 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattagg 3157006  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  3157007 tca-agttggaccgaact 3157023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 15820350 - 15820485
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||||||| |  ||||||||||||| |||||||||||| |||||| |||| |||||| |||||||| |||||||||||    
T  15820350 gtgagcttgttgaagctaatttcttgtaac-acatttgtatctctttttaagaactcattgatagtgcattgaagagataaatctctcatccagagtagg 15820448  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  |||||| |||||||| | ||||||| |||||||    
T  15820449 tca-agttggatcgaactaggtaaacatttattggtgt 15820485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 31659281 - 31659396
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||| ||||    
T  31659281 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaacttattgatagtggattggagagatcaatctctccctcagattagg 31659379  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  31659380 tca-agttggaccgaact 31659396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 134 - 245
Target Start/End: Complemental strand, 28223541 - 28223431
Alignment:
Q  134 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 232  Q
    |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | |||||||      
T  28223541 cttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattaggtca-a 28223444  T
Q  233 gttggaccgaact 245  Q
    |||||||||||||    
T  28223443 gttggaccgaact 28223431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 141 - 247
Target Start/End: Original strand, 20762727 - 20762833
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||   ||||||    
T  20762727 aagctaatttcttgtaaccc-ttttgtatctcttcgtaagaactcattgatagtggattggagagatcaatctctcctacagagtaggtcaagtttggac 20762825  T
Q  240 cgaactag 247  Q
    ||||||||    
T  20762826 cgaactag 20762833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 34603325 - 34603440
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  || ||| ||||||||||||| | ||||| |||     
T  34603325 aatcttggagaaccaaaagagggagctcttgggaaaagggttggtgccttttggggaagattcatggggttggaaaacacatgagtgaaaagtcttttgt 34603424  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  34603425 gagcaacttgggtgag 34603440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 13316465 - 13316352
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  13316465 aagctaatttcttgtaaccc-ttttgtatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 13316367  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  13316366 cgaactgggtgaaca 13316352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 13659458 - 13659346
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||||||||||| ||  ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  13659458 agcttgttgaagctaatttcttgttacccattta-tatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta 13659360  T
Q  231 ttgttggaccgaact 245  Q
      |||||||||||||    
T  13659359 -agttggaccgaact 13659346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 44455203 - 44455304
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||| |||||||||||||||| |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  44455203 gtgaacttgttgaaactaatttcttgtaactcattt-gtatctttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 44455301  T
Q  228 tca 230  Q
    |||    
T  44455302 tca 44455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 138 - 230
Target Start/End: Original strand, 1833574 - 1833666
Alignment:
Q  138 ttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||| ||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  1833574 ttgaagctaaattcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctccaccagattaggtca 1833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 4552762 - 4552647
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||    |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||||    
T  4552762 gtgagcttgttgaagctaatttcttgtaac-ccctttgtatccctttgtaagaactcattgataatggattggagagatcaatctctccctcagagtagg 4552664  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  4552663 tca-agttggaccgaact 4552647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 45644479 - 45644364
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  |||||||||||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||    
T  45644479 gtgagcttgtcaaagctaatttcttgcaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatatctcccccagattagg 45644381  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  45644380 tca-agttggaccgaact 45644364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 136 - 261
Target Start/End: Original strand, 5459956 - 5460081
Alignment:
Q  136 tgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 233  Q
    |||||||||||||||||||||||  ||||| ||| ||||||||| ||||||||| ||||| ||||||||||||||||||||| || ||||||| ||||||    
T  5459956 tgttgaagctaatttcttgtaac--attttatatttctttgtaaagaactcattgatagtagattggagagatcaatctctcatctagagtagatcattg 5460053  T
Q  234 ttggaccgaactagatgaacatttcttg 261  Q
    |||| | ||||||| | |||||||||||    
T  5460054 ttgggctgaactaggtaaacatttcttg 5460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 193361 - 193475
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||  || ||||||||||||| ||| ||||||| |||     
T  193361 aatcttggagaaccaaaagagggggctcttggggaaaaggttggtgcctttt-gggaagattcatggggttgggaaacacatgtgtgaagagtcttttgt 193459  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||| ||||    
T  193460 gagcaacttggatgag 193475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 11348447 - 11348562
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |  ||||||||||||| ||||||||||  || ||| ||||||||||||||||||||  |||     
T  11348447 aatcttggagaaccaaaagagggggctcttgggaaaaggtctggtgccttttggagaagattcatggggttggaaaacacatgagtggagagtcatttgt 11348546  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  11348547 gagcaacttgggtgag 11348562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 16455664 - 16455750
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctc 215  Q
    ||||||||||||||||||||||||||||||  | ||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  16455664 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctgtgtaagaactcattgatagtggattggagagatcaatctctc 16455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 34602758 - 34602643
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||| |||||||| |||| |||||||||||||||||||||||||||  || ||| ||||||||||||| | ||||| |||     
T  34602758 aatcttggagaaccaaaagagggagctcttggtaaaagggttggtgccttttggggaagattcatggggttggaaaacacatgagtgaaaagtcttttgt 34602659  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  34602658 gagcaacttgggtgag 34602643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 47114921 - 47115035
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||| | ||||||| |||||| ||||||||||||  || |||||||||||||| |||||||||| |||     
T  47114921 aatcttggagaaccaaaagagggggctcttgggaacagggttggtacctttt-gggaagattcatggggttgggaaacacatgaatggagagtcttttgt 47115019  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  47115020 gagcaacttgggtgag 47115035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 50167300 - 50167183
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  ||||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||| |||     
T  50167300 gtgagcttgtcaaagctaatttcttgtaacccattt-gtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcccccagattagc 50167202  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  |||||||||||||||    
T  50167201 tca-agttggaccgaactag 50167183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 51765450 - 51765565
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||   |||||    
T  51765450 aagctaatttcttgtaaccccttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggacaagtttgga 51765549  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| | ||||||    
T  51765550 ccgaactgggtgaaca 51765565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 13547508 - 13547394
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||||||||||||||||| ||||||| ||||| ||| ||||||||||| |||| ||||||  || ||| ||||||||||||||||||||| |||     
T  13547508 aatcttggataaccaaaagagggagctcttgtgaaaagggtcggtgccttttgaggaaaattcatggggttggaaaacacatgagtggagagtcttttgt 13547409  T
Q  118 gagcaacttgggtga 132  Q
    |||||||||||||||    
T  13547408 gagcaacttgggtga 13547394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 132
Target Start/End: Complemental strand, 13549419 - 13549305
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||||||||||||||||| ||||||| ||||| ||| ||||||||||| |||| ||||||  || ||| ||||||||||||||||||||| |||     
T  13549419 aatcttggataaccaaaagagggagctcttgtgaaaagggtcggtgccttttgaggaaaattcatggggttggaaaacacatgagtggagagtcttttgt 13549320  T
Q  118 gagcaacttgggtga 132  Q
    |||||||||||||||    
T  13549319 gagcaacttgggtga 13549305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 37503679 - 37503565
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||     ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || |    
T  37503679 gtgaacttgttgaagctaatttcttgtaacc----ttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattatg 37503584  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  |||||| ||||||||    
T  37503583 tca-agttggatcgaactag 37503565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 47255753 - 47255650
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggatgggaaacacatgagtggagagtctattgag 118  Q
    |||| |||| |||||||||| ||||||||||||||||    |||||||||||||||||||||||| || |||||||||||||| |||||||||| ||| |    
T  47255753 aatcttggagaaccaaaagatggggctcttgggaaaa----tggtgccttttggggaagattcatgggttgggaaacacatgattggagagtcttttgtg 47255658  T
Q  119 agcaactt 126  Q
    ||||||||    
T  47255657 agcaactt 47255650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 50169335 - 50169211
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  ||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||| |||||||||||||||| | ||| ||||    
T  50169335 gtgagcttgtcaaagctaatttcttgtaactcattt-gtatctctttgtaagtactcattgatagtggattgaagagatcaatctctcccctagattagg 50169237  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||  ||||||||||||| ||| ||||    
T  50169236 tca-agttggaccgaactggatcaaca 50169211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 13138101 - 13137986
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | |||| |||||||||||||||| |||| ||||||||||| ||||| |||||||||| | ||||||||    
T  13138101 gtgagcttgttgaagctaatttcttgtaaccca-tttgcatctctttgtaagaacacattgatagtggattgaagagagcaatctctcccctagagtagg 13138003  T
Q  228 tcattgttggaccgaact 245  Q
    ||| | ||||||||||||    
T  13138002 tca-tattggaccgaact 13137986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 264
Target Start/End: Complemental strand, 23555390 - 23555257
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||||    
T  23555390 gtgaacttgttgaaactaatttcttataactcattt-gtatctctttgtaagaactcattgatagtggattggagagttcaatctctcc-ccatagtagg 23555293  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtg 264  Q
    |||  |||||| ||||||   | ||||||||||||||    
T  23555292 tca-agttggatcgaactgagtaaacatttcttggtg 23555257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 41360957 - 41361074
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| |||||||||||||||  | ||||||||||||||||||||||| || ||||||||||  |||||||||| ||||| ||| ||||||    
T  41360957 gtgagcttgttgaaactaatttcttgtaaccca-tttgtatctctttgtaagaactcgttgatagtggattaaagagatcaatatctcccccatagtagg 41361055  T
Q  228 tcattgttggaccgaactag 247  Q
    ||| | ||||||||||||||    
T  41361056 tca-tattggaccgaactag 41361074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 264
Target Start/End: Complemental strand, 37282817 - 37282682
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatta-tagtggattggagagatcaatctctcctccagagtag 226  Q
    |||||||||||||||||||||| | |||||   ||||| |||||||||||| |||||||||| ||||||||||||||||| ||||||||||   ||||||    
T  37282817 gtgagcttgttgaagctaatttatggtaaccc-ttttgcatctctttgtaaagaactcattagtagtggattggagagataaatctctcctttggagtag 37282719  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtg 264  Q
    |||| | |||||| ||||||||| ||||||| ||||||    
T  37282718 gtcaat-ttggactgaactagataaacattttttggtg 37282682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 126
Target Start/End: Original strand, 19752435 - 19752542
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcatag-gatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||| |||||||||  ||||| ||||||||||||||||||||||||||| | | ||||||||||||||||||||||| | |||     
T  19752435 aatcttggagaaccaaaagatggggctcttatgaaaa-ggttggtgccttttggggaagattcattgagttgggaaacacatgagtggagagtattttgt 19752533  T
Q  118 gagcaactt 126  Q
    |||||||||    
T  19752534 gagcaactt 19752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 197033 - 196908
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctct-cctccagagtag 226  Q
    ||||||||||| ||| ||||||||||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||  |||||| || ||||| |||    
T  197033 gtgagcttgtttaagttaatttcttgtaactca-tttgtatccctttgtaagaactcattgatagtggattggagagatttatctctccccccagattag 196935  T
Q  227 gtcattgttggaccgaactagatgaaca 254  Q
    ||||  ||||||||||||| ||| ||||    
T  196934 gtca-agttggaccgaactggatcaaca 196908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 40122323 - 40122204
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt---atagtggattggagagatcaatctctcctccagagta 225  Q
    ||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||||||| ||   |||||||||| ||||||||||||||||| ||| | ||    
T  40122323 gtgagcttgtttaagctaatttcttataactcattt-gtatcactttgtaagaactctttgatatagtggattagagagatcaatctctcccccatatta 40122225  T
Q  226 ggtcattgttggaccgaactag 247  Q
    |||||  |||||||||||||||    
T  40122224 ggtca-agttggaccgaactag 40122204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 190 - 282
Target Start/End: Original strand, 2926613 - 2926706
Alignment:
Q  190 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttc-ttggtgttgttatcttttctctac 282  Q
    ||||||||||||||||||||||||| || |||||||||||||||||| |||||||||| | |||| ||| ||||||||||| | ||| ||||||    
T  2926613 tagtggattggagagatcaatctcttctgcagagtaggtcattgttgcaccgaactaggtaaacaattctttggtgttgttctttttactctac 2926706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 10925266 - 10925356
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaac---tcatt-atagtggattggagagatcaatctctcc 216  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||    ||||| ||||||||||||||| ||||||||||||    
T  10925266 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaagaattcattgatagtggattggagaaatcaatctctcc 10925356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 45 - 133
Target Start/End: Complemental strand, 31926099 - 31926010
Alignment:
Q  45 tcttgggaaaaaggttggtgccttttggggaagattcatagg-atgggaaacacatgagtggagagtctattgagagcaacttgggtgag 133  Q
    ||||| ||||| ||||||||||||||||||||||||||| ||  |||||||||| |||||||||| ||| ||| ||||||||||||||||    
T  31926099 tcttgtgaaaagggttggtgccttttggggaagattcatgggtttgggaaacacgtgagtggagaatcttttgtgagcaacttgggtgag 31926010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 37559994 - 37559877
Alignment:
Q  129 gtgagcttgttgaa-gctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctcc-agagta 225  Q
    |||| ||||||||| ||||||||||||||||  |||| |||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||| ||    
T  37559994 gtgaacttgttgaaagctaatttcttgtaacccattt-gtatctctttgtaagaactcgttgatagtgaattggagagatcaatctctccccctagatta 37559896  T
Q  226 ggtcattgttggaccgaact 245  Q
    |||||  |||||||||||||    
T  37559895 ggtca-agttggaccgaact 37559877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 928101 - 927966
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||   ||||| |||||||||||| |||||||| |||||||||| |||||| ||| |||| | |||  |||||    
T  928101 gtgagcttgttgaagctaatttcttgtaac-ccttttggatctctttgtaaaaactcattaatagtggattagagagaccaacctcttccccaaggtagg 928003  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  ||| ||||||||| | | |||||||||| ||||    
T  928002 tca-agttagaccgaactgggtaaacatttctttgtgt 927966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 128 - 263
Target Start/End: Complemental strand, 2263101 - 2262965
Alignment:
Q  128 ggtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagta 225  Q
    |||||||||||||||| ||||||||||||||   |||| ||||| ||||||| ||||| ||| ||||||||||| |||||||||||| |||   || |||    
T  2263101 ggtgagcttgttgaagataatttcttgtaaccc-ttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatctttcccttagggta 2263003  T
Q  226 ggtcattgttggaccgaactagatgaacatttcttggt 263  Q
    |||||||||||| |||||||   | |||||||||||||    
T  2263002 ggtcattgttggtccgaactgagtaaacatttcttggt 2262965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 3847246 - 3847131
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| ||||| ||||||| || |||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||| | ||||| ||||    
T  3847246 gtgagtttgtttaagctaaatttttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatccatctcttccccagattagg 3847148  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  3847147 tca-agttggaccgaact 3847131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 309
Target Start/End: Complemental strand, 12318646 - 12318468
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctt-tgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||||||||||||||||||||||||||| | |||||||| |||| | |||||||||||| ||| || |   ||||||||  ||||||| ||| ||||| |    
T  12318646 gagcttgttgaagctaatttcttgtaacca-ttttgtatgtcttctttaagaactcattgatactgaagcagagagatc--tctctcccccatagtagtt 12318550  T
Q  229 cattgttggaccgaactagatgaac-atttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggtt 309  Q
    |||| |||||||||||||| | ||| |||| ||||||||||| |||||||| |||       ||||||||||| ||||||||    
T  12318549 cattattggaccgaactaggtaaacaattttttggtgttgttctcttttctttactccctttatcttgtttattctttggtt 12318468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 40282435 - 40282545
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  40282435 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 40282532  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  40282533 aactgggtgaaca 40282545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 134 - 379
Target Start/End: Complemental strand, 9109540 - 9109292
Alignment:
Q  134 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcat 231  Q
    |||||||||| ||||||||||||||   |||||||||||||||||| |||| | || |||||| ||||||||||||||||||| |   |||||| |||||    
T  9109540 cttgttgaagttaatttcttgtaaccc-ttttgtatctctttgtaaagaacacgttgatagtgtattggagagatcaatctcttccatagagtaagtcat 9109442  T
Q  232 tgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatc-ttgtttatcctttggttagattgtggtttttctatgca 330  Q
     |||| ||| |||||| | ||||||| |||| | |||||| |  |||||||       ||| |||||||| |||||||| |||||||||| | ||   ||    
T  9109441 cgttgaaccaaactaggtaaacattttttggggctgttatttagtctctactctctttatctttgtttattctttggtttgattgtggttatgcttcaca 9109342  T
Q  331 cttgttttctagactagatctagat-tgttgttattgcttgtggtaattt 379  Q
     ||| || ||||  ||||||||||| |||||||||| |||||||| ||||    
T  9109341 gttggttgctagcttagatctagatctgttgttattacttgtggttattt 9109292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 13938195 - 13938288
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccaga-gtaggtcattgttgg 237  Q
    ||||||||||||||   ||||||||||||||||||| |||||||| |||||||||||||||||||  ||||||| ||||| |||||||||||||||    
T  13938195 taatttcttgtaaccttttttgtatctctttgtaagaaactcattgatagtggattggagagatc--tctctcccccagatgtaggtcattgttgg 13938288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 9987287 - 9987369
Alignment:
Q  173 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  9987287 tttgcaagaactcattgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 9987369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 173 - 254
Target Start/End: Complemental strand, 20622319 - 20622237
Alignment:
Q  173 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    ||||||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  20622319 tttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 20622237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 134 - 214
Target Start/End: Complemental strand, 30476566 - 30476486
Alignment:
Q  134 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctct 214  Q
    |||||||||| |||||| |||||||  |||| ||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  30476566 cttgttgaagataatttattgtaacccattt-gtatctctttgtaagaactcattgatactggattggacagatcaatctct 30476486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 9036471 - 9036584
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||| ||||  |||||||||||| |||||||||||   |||||    
T  9036471 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattgaagagtacaatctctcctcgagagtaggtcaagtttgga 9036568  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| | ||||||    
T  9036569 ccgaactgggtgaaca 9036584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 44203722 - 44203800
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  44203722 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 44203800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 36683766 - 36683824
Alignment:
Q  173 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||| |||||||||||||    
T  36683766 tttgtaagaactcattgatagtggattgtagaaatcaatctctcccccagagtaggtca 36683824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 245
Target Start/End: Original strand, 21054044 - 21054117
Alignment:
Q  173 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    ||||||||||||| || ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  21054044 tttgtaagaactctttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 21054117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 3460739 - 3460821
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaat 210  Q
    |||||||||||||||||||||| |||||||   |||||||| ||||||| ||||||  ||| ||||| ||||||||||||||||    
T  3460739 gtgagcttgttgaagctaatttattgtaac-ccttttgtatatctttgtaaagaacatattgatagtcgattggagagatcaat 3460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 6068377 - 6068447
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcat-aggatgggaaacaca 98  Q
    |||||||||||||||||||| || |||||||||||| |||||||| | |||||||| ||| |||||||||||    
T  6068377 aaccaaaagagggggctcttagg-aaaaggttggtgtcttttgggaagagattcataaggttgggaaacaca 6068447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 8871127 - 8871089
Alignment:
Q  189 atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||||| ||| ||||||    
T  8871127 atagtggattggagagatcaatctctcccccatagtagg 8871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 158
Target Start/End: Complemental strand, 37879036 - 37879007
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaac 158  Q
    ||||||||||||||||||||||||||||||    
T  37879036 gtgagcttgttgaagctaatttcttgtaac 37879007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 264
Target Start/End: Complemental strand, 44650288 - 44650153
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatta-tagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||| ||||| | |||||||| |||||| |  |||| |||||||||||||  || |||||| |||||||||| |||||||||||||| | | | |||||    
T  44650288 gtgagtttgttaacgctaatttattgtaaatc-ttttatatctctttgtaaataattcattaatagtggattgaagagatcaatctcttcccaaaagtag 44650190  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtg 264  Q
    |||| | |||||||||||||| | || |||| ||||||    
T  44650189 gtcaat-ttggaccgaactaggtaaatattttttggtg 44650153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 1050567 - 1050520
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 179  Q
    |||||| ||||||||||||||||||||| | |||||| |||||||||||    
T  1050567 gagcttattgaagctaatttcttgtaac-atttttgtgtctctttgtaa 1050520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 25652135 - 25652178
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 179  Q
    |||||||||||||||||||||||||  | ||||||||||||||||    
T  25652135 ttgttgaagctaatttcttgtaact-ctcttgtatctctttgtaa 25652178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 28318173 - 28318094
Alignment:
Q  24 tggataaccaaaagag-ggggctcttgggaaaaaggttggtgccttttgggga-agattcataggatgggaaacacatgag 102  Q
    |||||||||||||||| |||| ||||||| ||| |||| |||| ||||||||| |||||||| ||||| |||||| |||||    
T  28318173 tggataaccaaaagagaggggttcttggg-aaagggttagtgcattttggggagagattcatgggatgagaaacatatgag 28318094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 163; Significance: 6e-87; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 129 - 398
Target Start/End: Complemental strand, 18128 - 17859
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||    
T  18128 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaa-aactcattgatagtggattggagagatcaatctctcctccagggtagg 18031  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttat-cctttggttagattgtggtttttcta 326  Q
    |||   ||||| |||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| |||||||||||||||||||||| |||    
T  18030 tcaagtttggatcgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattcctttggttagattgtggttttgcta 17931  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgc 398  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  17930 tgcatttgttttctagattagatctagattgttgttattgcttgtggttatttacatttgattattggttgc 17859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 18420 - 18305
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgcctttt-ggggaagattcataggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||| ||||||||||||||||| ||||| |||||||||||||| |||||||||||||  | | | |||||||||||||||||||   |||     
T  18420 aatcttggagaacaaaaagagggggctcttgtgaaaagggttggtgccttttgggggaagattcatgaggttgaaaacacatgagtggagagttatttgt 18321  T
Q  118 gagcaacttgggtgag 133  Q
    |||||||||| |||||    
T  18320 gagcaacttgagtgag 18305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 146; Significance: 9e-77; HSPs: 72)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 130 - 372
Target Start/End: Complemental strand, 27637737 - 27637495
Alignment:
Q  130 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggtc 229  Q
    |||||||||| || |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27637737 tgagcttgtttaaactaatttcttgtaacccattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctgcagagtaggtc 27637638  T
Q  230 attgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgc 329  Q
    |||||||||||||||| | |||| ||||||||||||||||||||||||| |||       ||||||||||| | || ||| |||||||||||| ||||||    
T  27637637 attgttggaccgaactgggtgaatatttcttggtgttgttatcttttctttactctctttatcttgtttattccttagttggattgtggttttgctatgc 27637538  T
Q  330 acttgttttctagactagatctagattgttgttattgcttgtg 372  Q
    ||||| ||| |||||||| |||| ||||||||| |||||||||    
T  27637537 acttggtttatagactaggtctatattgttgttgttgcttgtg 27637495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 129 - 398
Target Start/End: Original strand, 213508 - 213780
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  213508 gtgagcttgttaaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccatagtagg 213606  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctcta--cnnnnnnnatcttgttta-tcctttggttagattgtggtttttc 324  Q
    |||   |||||||||||| | ||||||||||||||||||||||||||| || ||  |       |||||||||| |||||   || |||||||||||| |    
T  213607 tcaagtttggaccgaactgggtgaacatttcttggtgttgttatctttcctttactctctctttatcttgtttattccttgcttttgattgtggttttgc 213706  T
Q  325 tatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgc 398  Q
    |||||||||  ||  |||||||| |||| |||||||||||||||||||||  ||||||||||||||||| ||||    
T  213707 tatgcacttagttaatagactaggtctatattgttgttattgcttgtggttttttacatttggttattgattgc 213780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 129 - 336
Target Start/End: Original strand, 40147304 - 40147510
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40147304 gtgagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 40147402  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | ||||||||| || ||||| ||||||||||| |||       ||||||||||||||||||||  |||||||||||  |||    
T  40147403 tca-agttggaccgaactgggtgaacatttttttgtgtttttatcttttctttactctatttatcttgtttatcctttggttgaattgtggttttgttat 40147501  T
Q  328 gcacttgtt 336  Q
    |||||||||    
T  40147502 gcacttgtt 40147510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 5058088 - 5058334
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||| ||||||||| |  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  5058088 gtgagcttgttgaagctattttcttgtatcccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtagg 5058186  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgttta-tcctttggttagattgtggtttttcta 326  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       |||||||||| |||||   || |||| ||||||| |||    
T  5058187 tca-agttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttattccttgctttggattatggttttacta 5058285  T
Q  327 tgcacttgttttctagactagatc--tagattgttgttattgcttgtggt 374  Q
    ||||||||  || |||||||| ||  || ||||||||| |||||||||||    
T  5058286 tgcacttg-attatagactaggtctatatattgttgttgttgcttgtggt 5058334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 379
Target Start/End: Complemental strand, 16641062 - 16640814
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcattatagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||| ||||||  |||||  |||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||    
T  16641062 gtgagcttgttgaagctgatttctgataactc-ttttgtatctctttgtaagaact--tgatagtggattggagagatcaatctctcctccagagtaggt 16640966  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctct--acnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    ||  || || ||||||| | | |||||||||||||||||||||||||||| |   |       |||||| |||| |||| |||| |||||||||||  ||    
T  16640965 ca-agtagggccgaactgggtaaacatttcttggtgttgttatcttttctttgctctctatttatcttgcttattctttagttaaattgtggttttgtta 16640867  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaattt 379  Q
    |||| ||| |||||||| || ||||||||| ||||| ||||||||||| ||||    
T  16640866 tgcatttgatttctagattaaatctagatttttgttgttgcttgtggttattt 16640814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 13239794 - 13239930
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13239794 gtgaacttgttgaagctaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 13239892  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||   |||||||||||| | |||||| || |||||||    
T  13239893 tcaaatttggaccgaactgggtgaacaatttttggtgt 13239930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 129 - 265
Target Start/End: Original strand, 28278359 - 28278494
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||    
T  28278359 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaaaaactcattgatagtggattggagagatcaatctctcctccagagtagg 28278457  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  ||||||||||||| | |||||| ||||||||||    
T  28278458 tca-agttggaccgaactgggtgaacaattcttggtgt 28278494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 131 - 355
Target Start/End: Original strand, 316807 - 317032
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||| ||||||||| ||| ||||| |||| ||||||||||||| | |||||||||    
T  316807 gagcttgttgaagctaatttcttgtaa-tccttttgtatctctttgtaaagaactcattgataatggatcggagggatcaatctctcccctagagtaggt 316905  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatg 328  Q
    ||||||||||||||||| | | |||| ||||| |||||||| ||||||| ||||       || |||||||| ||||||||  ||||||||||| || |     
T  316906 cattgttggaccgaacttggtaaacaattctttgtgttgttctcttttccctactctctttattttgtttattctttggttcaattgtggttttgcttta 317005  T
Q  329 cacttgttttctagactagatctagat 355  Q
    |||||| || |||||  ||||||||||    
T  317006 cacttggttgctagataagatctagat 317032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 130 - 265
Target Start/End: Original strand, 16452124 - 16452258
Alignment:
Q  130 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||    
T  16452124 tgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattcatagtggattggagagataaatctctcccccagagtaggt 16452222  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgt 265  Q
    ||  ||||||||||||| | | |||||||||||||||    
T  16452223 ca-agttggaccgaactgggtaaacatttcttggtgt 16452258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 40147010 - 40147125
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||     
T  40147010 aatcttggagaaccaaaagagggggctcttgggaaaatggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagtcttttgt 40147109  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  40147110 gagcaacttgggtgag 40147125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 213228 - 213333
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||  || ||||||||||||||||||||||||| ||| ||||||||||    
T  213228 aaccaaaagagggggctcttgggaaaagggttggtgccttttggagaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttg 213327  T
Q  128 ggtgag 133  Q
    ||||||    
T  213328 ggtgag 213333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 28278064 - 28278180
Alignment:
Q  19 aatcatggataaccaaaagagggg-gctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattg 116  Q
    |||| |||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  || |||||||||||||||||||||| ||||||    
T  28278064 aatcttggagaaccaaaagaggggggctcttgggaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagtggagagactattg 28278163  T
Q  117 agagcaacttgggtgag 133  Q
     ||||||||||||||||    
T  28278164 tgagcaacttgggtgag 28278180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 37439200 - 37439309
Alignment:
Q  145 taatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 243  Q
    |||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  37439200 taatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaa 37439298  T
Q  244 ctagatgaaca 254  Q
    || | ||||||    
T  37439299 ctgggtgaaca 37439309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 9049467 - 9049332
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||| ||||||    
T  9049467 gtgagcttgttgaagctaatttcttgtaac-cattttgtatctctttgtaagaactcattgacagtggattggagagatcaatatctcccccaaagtagg 9049369  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    | |  ||||||||||| | ||| ||||||| |||||||    
T  9049368 tga-agttggaccgaaatggataaacattttttggtgt 9049332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 27015291 - 27015396
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||  || ||||||||||||||||||||||||| ||| ||||||||||    
T  27015291 aaccaaaagagggggctcttgtgaaaagggttggtgccttttggggaagaatcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttg 27015390  T
Q  128 ggtgag 133  Q
    ||||||    
T  27015391 ggtgag 27015396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 163 - 372
Target Start/End: Original strand, 27015599 - 27015808
Alignment:
Q  163 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 261  Q
    |||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||| | |||||||  ||||||||||||| | ||||||||| |||    
T  27015599 tttgtatctctttgtaagaactcattgatagtggattgtacagatcaatctctcctccaaaataggtca-agttggaccgaactgggtgaacattttttg 27015697  T
Q  262 gtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactag--atctagattgtt 359  Q
    ||| |||||| |||||| |||       ||||||||||| ||||||||  |||||||||||  ||||||||||  || ||||||||  || || ||||||    
T  27015698 gtg-tgttattttttctttactctctttatcttgtttatgctttggttgaattgtggttttgatatgcacttg-attatagactaggtatatatattgtt 27015795  T
Q  360 gttattgcttgtg 372  Q
    ||| |||||||||    
T  27015796 gttgttgcttgtg 27015808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 538068 - 538192
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| | ||||    
T  538068 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtagattggagagatcaatctctcccccatattagg 538166  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||  ||||||||||||| ||| ||||    
T  538167 tca-agttggaccgaactggatcaaca 538192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 230
Target Start/End: Original strand, 25412815 - 25412904
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25412815 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 25412904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 13488246 - 13488361
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||| ||||    
T  13488246 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccgagattagg 13488344  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  13488345 tca-agttggaccgaact 13488361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 42428555 - 42428440
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | ||||    
T  42428555 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccatattagg 42428457  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  42428456 tca-agttggaccgaact 42428440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 38746754 - 38746869
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||||||  || |||||||||| |||||||||||||  |||     
T  38746754 aatcttggagaaccaaaagagggggctcttaagaaaagggttggtgccttttggggaagattcatggggttgggaaacacgtgagtggagagtcatttgc 38746853  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  38746854 gagcaacttgggtgag 38746869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 188 - 278
Target Start/End: Original strand, 4160701 - 4160791
Alignment:
Q  188 tatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttct 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | || |||| || |||||||||||||||||    
T  4160701 tatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaactgggtaaatatttattagtgttgttatcttttct 4160791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 13343116 - 13343228
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||| |  ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  ||||||    
T  13343116 aagctaatttcttgtaa-tccttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcatgtttggac 13343213  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  13343214 cgaactgggtgaaca 13343228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 36074155 - 36074043
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |||||||||   ||||||    
T  36074155 aagctaatttcttgtaactc-ttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccaaagtaggtcaagtttggac 36074058  T
Q  240 cgaactagatgaaca 254  Q
    |||||| ||||||||    
T  36074057 cgaactggatgaaca 36074043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 533812 - 533927
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||| | ||||    
T  533812 gtgagcttgttgaagctaattttttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattggaaagatcaatctctcccccatattagg 533910  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  533911 tca-agttggaccgaact 533927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 9789335 - 9789224
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  9789335 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 9789237  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  9789236 aactgggtgaaca 9789224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 16409532 - 16409643
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  16409532 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 16409630  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  16409631 aactgggtgaaca 16409643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 26177939 - 26178050
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  26177939 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 26178037  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  26178038 aactgggtgaaca 26178050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 8566071 - 8565954
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| || |||||||||||||| |||||||||||||||||||||||||||  ||||| ||||    
T  8566071 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctctgtaagaactcattgatagtggattggagagatcaatctctcacccagattagg 8565973  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  |||||||||||||||    
T  8565972 tca-agttggaccgaactag 8565954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 13695816 - 13695680
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatta-tagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||| |||||||||| ||||||||| ||||||| | ||||||||||| |||||    
T  13695816 gtgagcttgttaaagctaatttcttgtaaccc-ttttgtatctctttgtaaagaactcattaatagtggattagagagattattctctcctccatagtag 13695718  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    ||||   ||||||| |||||| | |||||||||||||||    
T  13695717 gtca-acttggaccaaactaggtaaacatttcttggtgt 13695680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 30182643 - 30182756
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   |||| |||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||   ||||||    
T  30182643 aagctaatttcttgtaaccc-ttttctatctctttggaagaactcattgatagtggattggagagttcaatctctcctccagagtatgtcaagtttggac 30182741  T
Q  240 cgaactagatgaaca 254  Q
    |||||| ||||||||    
T  30182742 cgaactggatgaaca 30182756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 33831723 - 33831824
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| | ||||    
T  33831723 gtgagcttgtttaagctaatttcttgtaaccca-tttgtatctctttgtaagaactcattgatagtggattgaagagatcaatctctcccccatattagg 33831821  T
Q  228 tca 230  Q
    |||    
T  33831822 tca 33831824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 226
Target Start/End: Complemental strand, 42310060 - 42309963
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||| ||| |||||    
T  42310060 gtgagcttgttgaagctaatttcttgtaact-cttttgtatctctttgtaagaacttattgatagtggattagcgagatcaatctctcccccatagtag 42309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 129
Target Start/End: Original strand, 5057807 - 5057907
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||  || ||| ||||||||||||||||||||  ||| ||||||||||    
T  5057807 aaccaaaagagggg-cttttgggaaaaaggttggtgccttttggggaagattcatggggttggaaaacacatgagtggagagtcatttgtgagcaacttg 5057905  T
Q  128 gg 129  Q
    ||    
T  5057906 gg 5057907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 32636879 - 32636982
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| |||||||  |||||||    
T  32636879 aagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattaggtca-agttggac 32636976  T
Q  240 cgaact 245  Q
    ||||||    
T  32636977 cgaact 32636982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 42426354 - 42426243
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 233  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| || || |||||||  |    
T  42426354 ttgttgaagctaatttcttgcaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctccccctgattaggtca-ag 42426257  T
Q  234 ttggaccgaactag 247  Q
    |||||| |||||||    
T  42426256 ttggactgaactag 42426243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 18441759 - 18441648
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||   ||||||||    
T  18441759 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctctagagtaggtcaagtttggaccg 18441661  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  18441660 aactgggtgaaca 18441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 30683049 - 30682932
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa--ctcatt-atagtggattggagagatcaatctctcctccagagta 225  Q
    |||| |||||||||||||||||||||||||   |||||||| ||||||||||||  |||||| |||||||||||||||||||||||||||| ||||| ||    
T  30683049 gtgaacttgttgaagctaatttcttgtaaccc-ttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctctcccccagatta 30682951  T
Q  226 ggtcattgttggaccgaact 245  Q
    |||||  |||||||||||||    
T  30682950 ggtca-agttggaccgaact 30682932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 39468674 - 39468587
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    |||| |||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  39468674 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattagagagatcaatctctcc 39468587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 135 - 243
Target Start/End: Complemental strand, 28750774 - 28750667
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattg 233  Q
    ||||||||| ||||||| ||||||  |||| |||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||  |    
T  28750774 ttgttgaagttaatttcctgtaacccattt-gtatctttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattaggtca-ag 28750677  T
Q  234 ttggaccgaa 243  Q
    ||||||||||    
T  28750676 ttggaccgaa 28750667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 38747048 - 38747135
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    ||||||||||||||||||||||||||||||  | |||||||||||||| || |||||||| |||| |||||||||||||||||||||||    
T  38747048 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctttggaaaaactcattgatagaggattggagagatcaatctctcc 38747135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 27638034 - 27637920
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||| ||||||||||||| ||||||||| |||| ||||||||||||  || | ||||||||||||||| ||||||| ||      
T  27638034 aatcttggagaaccaaaagagggagctcttgggaaaagggttggtgcatttt-gggaagattcatggggttaggaaacacatgagtgaagagtcttttat 27637936  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  27637935 gagcaacttgggtgag 27637920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 10593312 - 10593426
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  10593312 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgg 10593409  T
Q  238 accgaactagatgaaca 254  Q
    |||||||| | ||||||    
T  10593410 accgaactgggtgaaca 10593426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 173 - 254
Target Start/End: Original strand, 26170848 - 26170930
Alignment:
Q  173 tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   |||||||||||| | ||||||    
T  26170848 tttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 26170930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 40751195 - 40751284
Alignment:
Q  305 tggttagattgtggtttttctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||| ||||||||||| ||||||||||| ||| |||| ||| |||| ||||||||||||||||||||   |||||||||||||||||||||    
T  40751195 tggttaaattgtggttttgctatgcacttggtttatagattaggtctatattgttgttattgcttgtgg---tttacatttggttattggttg 40751284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 265
Target Start/End: Complemental strand, 3075783 - 3075648
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||| |||| |||||||||||||||  |||| |||||| |||||||||| || || |||||| |||||||||||||||||||||  || ||||||    
T  3075783 gtgagcttgctgaatctaatttcttgtaacccattt-gtatctttttgtaagaattcgttgatagtgaattggagagatcaatctctccctcatagtagg 3075685  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    |||  |||||||| || | | |||||||||||||||||    
T  3075684 tca-agttggaccaaattgggtgaacatttcttggtgt 3075648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 33906154 - 33906042
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||||||| |||||||| ||||||||| |  |||||||||||||||||| ||||||||| ||||| ||||||| |||||||||||| | | |||||||||    
T  33906154 gagcttgtcgaagctaacttcttgtaa-tccttttgtatctctttgtaaagaactcattgatagtagattggaaagatcaatctcttccctagagtaggt 33906056  T
Q  229 cattgttggaccga 242  Q
    || |||||||||||    
T  33906055 caatgttggaccga 33906042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 135 - 247
Target Start/End: Complemental strand, 10054935 - 10054823
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcatt 232  Q
    ||||||||||||||||||| ||||   |||||||||||||||||| ||||||||| |||||| |||||||| |||||| ||||| ||| ||| ||| |||    
T  10054935 ttgttgaagctaatttcttataacc--ttttgtatctctttgtaatgaactcattgatagtgtattggagatatcaatatctcccccaaagtgggtaatt 10054838  T
Q  233 gttggaccgaactag 247  Q
    |||||||| ||||||    
T  10054837 gttggaccaaactag 10054823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 31183015 - 31183129
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| ||||| ||| |||||||||||||| |  |||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||| ||| | ||||    
T  31183015 gtgagtttgtttaagttaatttcttgtaacca--tttgtatccctttgtaagaactcattgatactggattggagagatctatctctcccccatattagg 31183112  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  31183113 tca-agttggaccgaact 31183129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 29722582 - 29722692
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  29722582 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaaatttggaccg 29722679  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  29722680 aactgggtgaaca 29722692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 29751270 - 29751160
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  29751270 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 29751173  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  29751172 aactgggtgaaca 29751160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 22536403 - 22536290
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttgga 238  Q
    ||||||||||||||||||   ||||||||| |||| |||||||||| || |||||||||||| |||  ||||||||||||||||||||||||   |||||    
T  22536403 aagctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggggagtacaatctctcctccagagtaggtcaagtttgga 22536306  T
Q  239 ccgaactagatgaaca 254  Q
    ||||||| | ||||||    
T  22536305 ccgaactgggtgaaca 22536290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 161 - 265
Target Start/End: Original strand, 30793210 - 30793314
Alignment:
Q  161 attttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttc 258  Q
    ||||||||||||||||||| ||||| ||| |||||| | ||||||||||  ||||||| | |||||| |||||||||||||||||| || | ||||||||    
T  30793210 attttgtatctctttgtaaagaactaattgatagtgaagtggagagatc--tctctcccctagagtaagtcattgttggaccgaacaaggtaaacatttc 30793307  T
Q  259 ttggtgt 265  Q
    |||||||    
T  30793308 ttggtgt 30793314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 3325958 - 3326063
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactc-attatagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||| || || ||||||| ||||||||||| ||||   || |||||||    
T  3325958 gagcttgttgaagctaatttcttgtaac-cattgtgtatctctttgtaaagaactcaatgatggtggattagagagatcaatatctctcacatagtaggt 3326056  T
Q  229 cattgtt 235  Q
    |||||||    
T  3326057 cattgtt 3326063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 188
Target Start/End: Original strand, 42926911 - 42926968
Alignment:
Q  130 tgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt 188  Q
    |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  42926911 tgagattgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactcatt 42926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 29720422 - 29720532
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  |||||||||||| |||||||||||   ||||||||    
T  29720422 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctctagagtaggtcaagtttggaccg 29720519  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  29720520 aactgggtgaaca 29720532  T

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Target: chr5; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 25078211 - 25078289
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  25078211 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25078289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 25136180 - 25136258
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  25136180 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 25136258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 40380181 - 40380259
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  |||||||||||||||| |||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  40380181 aagaactcatttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40380259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Original strand, 40382392 - 40382470
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  |||||||||||||||| |||| ||||||||||||||||||||   |||||||||||| | ||||||    
T  40382392 aagaactcatttgatagtggattggagagttcaaactctcctccagagtaggtcaagtttggaccgaactgggtgaaca 40382470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 265
Target Start/End: Original strand, 42926967 - 42927069
Alignment:
Q  163 tttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttg 261  Q
    |||||||||||||||||||||||||| | ||||||||| ||| || ||||||||   || |||||||||  ||||||||||||| | | |||||||||||    
T  42926967 tttgtatctctttgtaagaactcattgacagtggattgaagaaataaatctctctctcatagtaggtca-agttggaccgaactgggtaaacatttcttg 42927065  T
Q  262 gtgt 265  Q
    ||||    
T  42927066 gtgt 42927069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 397
Target Start/End: Original strand, 40763200 - 40763289
Alignment:
Q  305 tggttagattgtggtttttctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    |||||| ||| ||||||| ||||||||||| ||| |||| ||| |||| |||||||||||||||| |||   |||||||||| ||||||||||    
T  40763200 tggttaaattatggttttgctatgcacttggtttatagattaggtctatattgttgttattgcttatgg---tttacatttgattattggttg 40763289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 189 - 245
Target Start/End: Original strand, 19806466 - 19806521
Alignment:
Q  189 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||||||||||||||||||| ||||| |||||||  |||||||||||||    
T  19806466 atagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaact 19806521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 316515 - 316624
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcat-aggatgggaaacacatgagtggagagtctattg 116  Q
    |||| |||| ||||||||| ||||||||||||| | | ||||||||||||||||||| |||||||| ||| |||||||||||| |   |||||||| |||    
T  316515 aatcttggagaaccaaaagggggggctcttggg-agagggttggtgccttttggggagagattcataaggttgggaaacacatcaaaagagagtct-ttg 316612  T
Q  117 agagcaacttgg 128  Q
     |||||||||||    
T  316613 tgagcaacttgg 316624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 322
Target Start/End: Complemental strand, 10700771 - 10700581
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||||| ||| |||| | ||||||||||||||  || ||||||||| |||||| | ||||||||||  ||||||| ||| |||||||    
T  10700771 gagcttgttgaagctaatt-cttataac-atttttgtatctctttaaaaagaactcattgatagtgaagtggagagatc--tctctcccccatagtaggt 10700676  T
Q  229 cattgttggaccgaactagatgaacatttc-ttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttt 322  Q
    |||||||  ||||||||   | || | ||| || |||||||| ||||||||||||       |||||| |||| ||||| || ||||||||||||    
T  10700675 cattgtttcaccgaactgagtaaataattctttcgtgttgttctcttttctctacgctctttatcttgcttattctttgatttgattgtggtttt 10700581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 16544499 - 16544568
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  16544499 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 16544568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 16546721 - 16546790
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| ||||||||||||||||||||   ||||||||||||    
T  16546721 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggtcaagtttggaccgaact 16546790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 116
Target Start/End: Complemental strand, 10055125 - 10055027
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattca-taggatgggaaacacatgagtggagagtctattg 116  Q
    |||| |||| ||||||||||| ||||||||||| ||| | |||||||||| |||||| |||||||   || |||||||||||||||| ||||||| ||||    
T  10055125 aatcttggagaaccaaaagagagggctcttggg-aaaggtttggtgccttatggggagagattcacggggttgggaaacacatgagtagagagtcaattg 10055027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 110
Target Start/End: Original strand, 30802700 - 30802782
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcat-aggatgggaaacacatgagtggagagt 110  Q
    |||||||||||| |||||||||| ||| |||| |||||||||||||| ||||||||  || | | |||||||||||||||||||    
T  30802700 aaccaaaagaggaggctcttggg-aaagggtttgtgccttttggggagagattcatggggttagaaaacacatgagtggagagt 30802782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 132
Target Start/End: Original strand, 4160383 - 4160496
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcataggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||| ||||||||||||||||||| | | |||  ||| |||||||||| ||||||||||| | || ||||| | |||||||||||  |||     
T  4160383 aatcctggagaactaaaagagggggctcttggg-agagggtaagtgtcttttggggagagattcatagggttgggaacacgtaagtggagagtcatttgt 4160481  T
Q  118 gagcaacttgggtga 132  Q
    |||||||| ||||||    
T  4160482 gagcaactagggtga 4160496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Complemental strand, 14689548 - 14689503
Alignment:
Q  133 gcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 179  Q
    |||||||||||||||||| |||||| || ||||||||||||||||||    
T  14689548 gcttgttgaagctaattttttgtaa-tatttttgtatctctttgtaa 14689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 107
Target Start/End: Complemental strand, 16642285 - 16642208
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcat-aggatgggaaacacatgagtggag 107  Q
    |||||||||||||  |||||||||||  ||||||||||||||||||| ||||||||  || | ||||||||||||||||||    
T  16642285 aaccaaaagaggg--ctcttgggaaag-ggttggtgccttttggggacagattcatggggttaggaaacacatgagtggag 16642208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 141; Significance: 8e-74; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 19 - 397
Target Start/End: Original strand, 7451049 - 7451429
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||||||||||||| || ||| ||||| || ||||||| ||||||| ||  || ||| ||||||||||||||||||||  |||     
T  7451049 aatcttggagaaccaaaagagggggctctttggtaaagggttgatgacttttggagaagatttatggggttggaaaacacatgagtggagagtcatttgt 7451148  T
Q  118 gagcaacttgggtgag-cttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctc 215  Q
    |||||||||| || || |||||||||||||||||||||||| | | ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  7451149 gagcaacttgagtaagacttgttgaagctaatttcttgtaattca-tttgtatctctttgtaataactcattgatagtggattgcagagatcaatctctc 7451247  T
Q  216 ctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgttgt-tatcttttctcta--cnnnnnnnatcttgtttatcctttggttaga 312  Q
    ||| | |||||||||  |||||| |||||| | ||||||||| |||||||||| ||| |||||||||  |       ||||||||||| |||||||| ||    
T  7451248 ctctacagtaggtca-agttgga-cgaactgggtgaacatttattggtgttgtctat-ttttctctactctctctttatcttgtttattctttggttcga 7451344  T
Q  313 ttgtggtttttctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    ||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||   ||||||||||||    
T  7451345 ttgtggttttgttatgcacttgttttctagattagatctagattgttgttattgcttgtggttattgacaagaggttattggttg 7451429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 129 - 399
Target Start/End: Complemental strand, 42288235 - 42287966
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||| |||||||  |||| |||| ||||||||||| |||||| ||| |||||||||||||||||||||||| ||||| ||||    
T  42288235 gtgagcttgttgaagctaatttattgtaacccattt-gtatttctttgtaagagctcattgataatggattggagagatcaatctctcc-ccagattagg 42288138  T
Q  228 tcattgttggaccgaactagatgaaca-tttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    |||  ||||||||||||| | | || | |||||||||| ||||||||||||| |||       | ||||||||| | |||||| ||||||||||||||||    
T  42288137 tcaa-gttggaccgaactgggtcaataatttcttggtgctgttatcttttctttaccctctttaacttgtttattccttggttggattgtggtttttcta 42288039  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgcttgtggtaatttacatttggttattggttgcc 399  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  42288038 tgcacttgttttctagattagatctagattgttgttattgcttgtggttatttacatttggttattggttgcc 42287966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 129 - 399
Target Start/End: Original strand, 45726972 - 45727240
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45726972 gtgagcttgttgaagctaatttcttgtaacctattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 45727070  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | ||||||||| || ||||||||||||||||| |||       ||||  ||||| |||||||| |||||||||||| ||||    
T  45727071 tca-agttggaccgaactgggtgaacattttttagtgttgttatcttttctttactctctttatct--tttattctttggttggattgtggttttgctat 45727167  T
Q  328 gcacttgttttctagactagatctagattgttgttattgcttgtgg-taatttacatttggttattggttgcc 399  Q
    ||||||  ||| |||||||| |||| ||| ||||| |||||||||| | ||||||||||||||||| ||||||    
T  45727168 gcacttagtttatagactaggtctatattattgttgttgcttgtggtttatttacatttggttattagttgcc 45727240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 129 - 352
Target Start/End: Complemental strand, 35447009 - 35446788
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||| |||||||||||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  35447009 gtgatcttgttgaatctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcactctctcctccagagtagg 35446911  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    |||  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||| ||||||||  ||||||||||| ||||    
T  35446910 tcaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatgctttggttgaattgtggttttgctat 35446812  T
Q  328 gcacttgttttctagactagatcta 352  Q
    |||||||  || |||||||||||||    
T  35446811 gcacttg-attatagactagatcta 35446788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 129 - 368
Target Start/End: Original strand, 33648214 - 33648454
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||||||||||||||||||||| ||||||   |||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  33648214 gtgagcttgttgaagctaatttcctgtaaccc-ttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcctccagagtag 33648312  T
Q  227 gtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttcta 326  Q
    ||||||||||||||||||| | | ||||||| ||||||||||| ||||||||||||       ||||||||||| |||| |||  |||||| |||| |||    
T  33648313 gtcattgttggaccgaactgggtaaacatttattggtgttgttgtcttttctctactctctttatcttgtttattctttagtttaattgtgattttgcta 33648412  T
Q  327 tgcacttgttttctagactagatctagattgttgttattgct 368  Q
    ||||||||  || |||| |||  ||||||||||||| |||||    
T  33648413 tgcacttggcttatagattaggcctagattgttgttgttgct 33648454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 180 - 397
Target Start/End: Original strand, 17450671 - 17450884
Alignment:
Q  180 gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaacatttcttggtgttgttatcttttct 278  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||||||  ||||||||||||||| |||||| |  ||||||||||||||||||||    
T  17450671 gaactcattgatagtggattggagagatcaatctctccac-agagtaggtcaa-gttggaccgaactaggtgaacaatctttggtgttgttatcttttct 17450768  T
Q  279 ctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatctagattgttgttattgcttgtggtaatt 378  Q
     |||       ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| | |||||||||||| |||||||||   |||    
T  17450769 gtactctctttatcttgtttatcctttggttagattgtggttttgctatgcacttggtttctagattaggtttagattgttgttgttgcttgtg---att 17450865  T
Q  379 tacatttggttattggttg 397  Q
    ||||||||||||| |||||    
T  17450866 tacatttggttatcggttg 17450884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 129 - 357
Target Start/End: Original strand, 24398100 - 24398332
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||||||||||||||||||||||||||||   |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  24398100 gtgagcttgttgaagctaatttcttgtaaccc-ttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctctcccccatagtag 24398198  T
Q  227 gtcattgttggaccgaactagatgaac-atttcttggtgttgttatc---ttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttt 322  Q
    ||||||||||||||||||| | ||||| ||| |||||||||||||||   ||||||||||       ||||||||||  | |||||  ||||| ||||||    
T  24398199 gtcattgttggaccgaactggctgaacaattacttggtgttgttatctatttttctctactctctttatcttgtttagtc-ttggtccgattgcggtttt 24398297  T
Q  323 tctatgcacttgttttctagactagatctagattg 357  Q
     ||||||||||  |||||||| ||||| |||||||    
T  24398298 gctatgcacttagtttctagattagatttagattg 24398332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 129 - 277
Target Start/End: Complemental strand, 1631857 - 1631710
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||| |||||||||  |||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  1631857 gtgagcttgttgaagctaatatcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagaaatcaatctctcctccagagtagg 1631759  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttc 277  Q
    |||  |||||||||||||   |||| ||||||| ||||||||||||||||    
T  1631758 tca-agttggaccgaactgagtgaatatttcttagtgttgttatcttttc 1631710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 2334543 - 2334427
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2334543 gtgaacttgttgaagctaatttctagtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 2334445  T
Q  228 tcattgttggaccgaact 245  Q
    |||   ||||||||||||    
T  2334444 tcaagtttggaccgaact 2334427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 129 - 254
Target Start/End: Complemental strand, 36988201 - 36988076
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  || ||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36988201 gtgagcttgtcaaaactaatttcttgtaactc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtagg 36988103  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||   |||||||||||| | ||||||    
T  36988102 tcaagtttggaccgaactgggtgaaca 36988076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 129 - 260
Target Start/End: Complemental strand, 17490273 - 17490143
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| | ||||||||    
T  17490273 gtgagcttgttgaagctaatttcttgtaact-cttttgtaactctttgtaagaactcattgatagtggattgtagagatcaatctctcccctagagtagg 17490175  T
Q  228 tcattgttggaccgaactagatgaacatttctt 260  Q
    ||| | |||||||||||| | | ||||||||||    
T  17490174 tcaat-ttggaccgaactgggtaaacatttctt 17490143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 17057491 - 17057379
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  17057491 agcttgttgaagctaattttttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtca 17057393  T
Q  231 ttgttggaccgaact 245  Q
      |||||||||||||    
T  17057392 -agttggaccgaact 17057379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 17085474 - 17085362
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||    
T  17085474 agcttgttgaagctaattttttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagactaggtca 17085376  T
Q  231 ttgttggaccgaact 245  Q
      |||||||||||||    
T  17085375 -agttggaccgaact 17085362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 1632141 - 1632036
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||  || ||||||||||||||||||||||||| ||| ||||||||||    
T  1632141 aaccaaaagagggggctcttgtgaaaagggttggtgtcttttggggaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttg 1632042  T
Q  128 ggtgag 133  Q
    ||||||    
T  1632041 ggtgag 1632036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 6595131 - 6595015
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||   ||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  6595131 gtgaacttgttgaagctaatttcttgtaaccc-ttttgaatctctttgtaagaactcgttgatagtggattggagagatcaatctctcctccagagtagg 6595033  T
Q  228 tcattgttggaccgaact 245  Q
    |||   ||||||||||||    
T  6595032 tcaagtttggaccgaact 6595015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 36773605 - 36773720
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||| || |    
T  36773605 gtgagcttgttgaagctaatttcttgtaactca-tttgtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccagattatg 36773703  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  36773704 tca-agttggaccgaact 36773720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 42288518 - 42288414
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||  || ||||||||||||||||||||||||| ||| ||||||||||    
T  42288518 aaccaaaagagggggctcttgggaaaagggttggtgcctttt-gggaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttg 42288420  T
Q  128 ggtgag 133  Q
    ||||||    
T  42288419 ggtgag 42288414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 723869 - 723754
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||    
T  723869 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatcaatctctcccccagattagg 723771  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  723770 tca-agttggaccgaact 723754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 33162575 - 33162458
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  | ||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| | ||| ||||    
T  33162575 gtgagcttgttgaagctaatttcttgtaaccca-tttgtatctctctgtaagaactcattgatagtggattagagagatcaatctctcccctagattagg 33162477  T
Q  228 tcattgttggaccgaactag 247  Q
    |||  |||||||||||||||    
T  33162476 tca-agttggaccgaactag 33162458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 4503245 - 4503133
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  4503245 aagctaatttcttgtaactc-ttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 4503148  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  4503147 cgaactgggtgaaca 4503133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 5723369 - 5723256
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |   ||||||    
T  5723369 aagctaatttcttgtaacct-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctctagagtaggttaagtttggac 5723271  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  5723270 cgaactgggtgaaca 5723256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 45099810 - 45099922
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  45099810 aagctaatttcttgtaactc-ttttgtatctctttg-aagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 45099907  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  45099908 cgaactgggtgaaca 45099922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 7815395 - 7815311
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactca-ttatagtggattggagagatcaatctctcc 216  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  7815395 agcttgttgaagctaatttcttgtaact-cttttgtatctctttgtaagaactcatttatagtggattggagagattaatctctcc 7815311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 29 - 133
Target Start/End: Complemental strand, 35447292 - 35447188
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggat-gggaaacacatgagtggagagtctattgagagcaacttg 127  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||| ||||||||| || | |||||||||||||||||||||||| ||| ||||||||||    
T  35447292 aaccaaaagagggg-ctcttgtgaaaagggttggtgccttttgggaaagattcatggggttgggaaacacatgagtggagagtcttttgtgagcaacttg 35447194  T
Q  128 ggtgag 133  Q
    ||||||    
T  35447193 ggtgag 35447188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 36318134 - 36318019
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||||||||||||| ||||||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||    
T  36318134 gtgagcttgttgaaactaatttattgtaacccattt-gtatctctttgtaagaactcattgatagtggattggagagatcaatctctcccttagagtagg 36318036  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  36318035 tca-agttggaccgaact 36318019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 131 - 354
Target Start/End: Complemental strand, 30218168 - 30217945
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    |||||| ||||||||||||||||||||| | ||||||||||||||||||  || ||||| ||||||| ||| | ||||||||| |||| |||||||| ||    
T  30218168 gagcttattgaagctaatttcttgtaacca-ttttgtatctctttgtaaataattcattgatagtgggttgaaaagatcaatcactcccccagagtaagt 30218070  T
Q  229 cattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctatg 328  Q
    ||||||||||| ||||| | | ||||||| ||||||| | | | ||||||||||       ||||||||||| |||||||| |||||||||| |  | |     
T  30218069 cattgttggactgaactcggtaaacattttttggtgtagctct-ttttctctactctctttatcttgtttattctttggtttgattgtggttgtgtttta 30217971  T
Q  329 cacttgttttctagactagatctaga 354  Q
    |||||| |||||||| | ||||||||    
T  30217970 cacttggtttctagattggatctaga 30217945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 45726679 - 45726793
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcataggatg-ggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||| ||||||||||||  ||||||||||||||||||||||||||| || |  ||||||||||||||||||||||  |||     
T  45726679 aatcttggagaaccaaaagagggagctcttgggaaag-ggttggtgccttttggggaagattcatggggtttggaaacacatgagtggagagtcatttgt 45726777  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  45726778 gagcaacttgggtgag 45726793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 42362395 - 42362496
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||    
T  42362395 gtgagcttgtttaagctaatttcttgtaacccattt-gtatccctttgtaagaactcattgatagtggattggagagatctatctctcccccagattagg 42362493  T
Q  228 tca 230  Q
    |||    
T  42362494 tca 42362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 11067348 - 11067463
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||  ||||||||||||||||||  |||| ||||||||||||||||||||||| ||| ||||||| |||||||||||||||| ||||| ||||    
T  11067348 gtgagcttgtcaaagctaatttcttgtaacccattt-gtatctctttgtaagaactcatttataatggattgaagagatcaatctctcccccagattagg 11067446  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  11067447 tca-agttggaccgaact 11067463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 38312283 - 38312398
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| ||||||||| |||||||||||||||  |||| |||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| || |    
T  38312283 gtgaacttgttgaaactaatttcttgtaacccattt-gtatctctttgtaagatctcattgatagtggattggagagatcaatctctcccccagattatg 38312381  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  38312382 tca-agttggaccgaact 38312398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 26353227 - 26353341
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||| |||||||||||||||||||||||| | |||||||||| |||||||| ||||||| |||||||||||||||||||| |||||||   ||||||||    
T  26353227 gtgagtttgttgaagctaatttcttgtaac-acttttgtatctttttgtaagtactcattgatagtggattggagagatcactctctcccttagagtagg 26353325  T
Q  228 tcattgttggaccgaac 244  Q
    |||  ||||||||||||    
T  26353326 tca-agttggaccgaac 26353341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 230
Target Start/End: Complemental strand, 4484444 - 4484354
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  4484444 aagctaatttcttgtaaccc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 4484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 14633951 - 14633835
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| |||| ||||||||||||  |||||||||||||||||||||||||||| ||||| |||    
T  14633951 gtgagcttgtttaagctaatttcttgtaacccattt-gtatcccttttgtaagaactcatagatagtggattggagagatcaatctctcccccagattag 14633853  T
Q  227 gtcattgttggaccgaact 245  Q
    ||||  |||||||||||||    
T  14633852 gtca-agttggaccgaact 14633835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 34139896 - 34139780
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctc-tttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtag 226  Q
    ||||||||||| ||||||||||||||||||  | | |||||| | |||||||||||||||| |||||||||||||||||||||||||||| ||||| |||    
T  34139896 gtgagcttgtttaagctaatttcttgtaaccca-tatgtatcccttttgtaagaactcattgatagtggattggagagatcaatctctcccccagattag 34139798  T
Q  227 gtcattgttggaccgaact 245  Q
    ||||  |||||||||||||    
T  34139797 gtca-agttggaccgaact 34139780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 11151716 - 11151601
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  |||| ||||| |||||||||||||| |  ||||||||||||||||||||| |||||| ||||| ||||    
T  11151716 gtgagcttgtttaagctaatttcttgtaacccattt-gtatcactttgtaagaactcttagatagtggattggagagatcaacctctcccccagattagg 11151618  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  11151617 tca-agttggaccgaact 11151601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 29867924 - 29868027
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||  |||| |||||||||||||||||||| || |||||||||||||||||||||||||||| ||| | |||||||  |||||||    
T  29867924 aagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatagtggattggagagatcaatctctcccccaaattaggtca-agttggac 29868021  T
Q  240 cgaact 245  Q
    ||||||    
T  29868022 cgaact 29868027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 28672036 - 28672088
Alignment:
Q  191 agtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 243  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28672036 agtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 28672088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 32289621 - 32289732
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    ||||||||||||||||  |||||||||||||| ||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||   ||||||||    
T  32289621 ctaatttcttgtaactc-ttttgtatctcttttgtaagaactcattgatagtaaattagagagatcaatctctcctccagagtaggtcaagtttggaccg 32289719  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  32289720 aactgggtgaaca 32289732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 30833404 - 30833490
Alignment:
Q  145 taatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    ||||||||||||||   |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  30833404 taatttcttgtaaccc-ttttgtatctcttttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtca 30833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 265
Target Start/End: Complemental strand, 42019995 - 42019859
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa---ctcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||| ||   |||||| |||||| ||| ||||||||||||||| | ||| ||||||    
T  42019995 agcttgtagaagctaatttcttgtaactc-ttttgtatctctttgtaaaaaaaactcattgatagtgaatttgagagatcaatctcttccccatagtagg 42019897  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgt 265  Q
    | ||||||||||| || | ||| |||| ||||||||||    
T  42019896 ttattgttggaccaaattggataaacacttcttggtgt 42019859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 129 - 230
Target Start/End: Original strand, 11049596 - 11049698
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||| ||||   ||| ||||||||||||||||||||||| ||||| ||||| | ||||||||||||||| || | ||||    
T  11049596 gtgagcttgttgaagctaatttcttataacccttttagtatctctttgtaagaactcattgatagtagattgaaaagatcaatctctccttcataatagg 11049695  T
Q  228 tca 230  Q
    |||    
T  11049696 tca 11049698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 254
Target Start/End: Complemental strand, 36205777 - 36205665
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    |||||||||||||||||||  ||||||||||||||| ||||||||||| | || ||||||||||| ||||||| |||||||||||||||||   ||||||    
T  36205777 aagctaatttcttgtaactc-ttttgtatctctttg-aagaactcattgacagcggattggagagttcaatctatcctccagagtaggtcaagtttggac 36205680  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  36205679 cgaactgggtgaaca 36205665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 254
Target Start/End: Original strand, 11690544 - 11690668
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||| ||||||||||||||||||  | |||||||| ||||||||||| || || ||||||||||||||||||||| |||||| ||| | || |    
T  11690544 gtgagcttgtttaagctaatttcttgtaaccca-tttgtatccctttgtaagaaatcgttgatagtggattggagagatcaacctctcccccatattacg 11690642  T
Q  228 tcattgttggaccgaactagatgaaca 254  Q
    |||  ||||||||||||| ||| ||||    
T  11690643 tca-agttggaccgaactggatcaaca 11690668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 220
Target Start/End: Original strand, 13121812 - 13121901
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctcca 220  Q
    ||||||||||||||| ||||||||||||||    ||||||||||||||||  |||||||| ||||||||||| ||| ||||||||||||||||    
T  13121812 gtgagcttgttgaagataatttcttgtaac---ctttgtatctctttgtagaaactcattgatagtggattgaagaaatcaatctctcctcca 13121901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 24397806 - 24397900
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcat-aggatgggaaacacatgagtggagagtc 111  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||||  || ||| ||||||||||||||||||||    
T  24397806 aatcttggagaaccaaaagagggggctcttgggaaaagggttggtgccttttagggagagactcatcgggctggtaaacacatgagtggagagtc 24397900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 144 - 254
Target Start/End: Original strand, 6266749 - 6266859
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    |||||||||||||||   ||||||||| |||| |||||||||| || ||||||||||||||||  ||||||||||||||||||||||||   ||||||||    
T  6266749 ctaatttcttgtaacc--ttttgtatcccttttgtaagaactctttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccg 6266846  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  6266847 aactgggtgaaca 6266859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 141 - 245
Target Start/End: Complemental strand, 13656146 - 13656041
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctc-tttgtaagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttgg 237  Q
    ||||||||||||||||||   | ||||||| | ||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  13656146 aagctaatttcttgtaac--ctcttgtatcccttttgtaagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttgg 13656049  T
Q  238 accgaact 245  Q
    ||||||||    
T  13656048 accgaact 13656041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 17450340 - 17450455
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtgga-gagtctattg 116  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||||||| |||| | |||||||||  |||||||||||||||||| | | ||||| ||||    
T  17450340 aatcttggagaaccaaaagagggggctcttggg-aaagggttggtgccctttgtgaaagattcatggggatgggaaacacatgagcgaaggagtcaattg 17450438  T
Q  117 agagcaacttgggtgag 133  Q
     ||| ||||||||||||    
T  17450439 tgagaaacttgggtgag 17450455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 12647464 - 12647386
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  12647464 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 12647386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 245
Target Start/End: Original strand, 39284930 - 39284994
Alignment:
Q  181 aactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||||||  |||||||||||||    
T  39284930 aactcattgatagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaact 39284994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 246
Target Start/End: Complemental strand, 7597131 - 7597020
Alignment:
Q  134 cttgttgaagctaatttcttgtaactaattttgtatctctttgtaa-gaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcat 231  Q
    ||||| ||| |||||||||||||| |  |||||||||| ||||||| ||||||||| || || ||  |||||||||  |||||||| |||||||||||||    
T  7597131 cttgtcgaaactaatttcttgtaagtc-ttttgtatctttttgtaaagaactcattgattgtagaacggagagatc--tctctccttcagagtaggtcat 7597035  T
Q  232 tgttggaccgaacta 246  Q
    |||| ||||||||||    
T  7597034 tgttagaccgaacta 7597020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 14202530 - 14202450
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcc 216  Q
    ||||||||||| ||||||||||||||||||| ||         ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  14202530 gtgagcttgtttaagctaatttcttgtaactcatc--------ctttgtaagaactcattgatagtagattggagagatcaatctctcc 14202450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 111
Target Start/End: Original strand, 33647918 - 33648012
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattca-taggatgggaaacacatgagtggagagtc 111  Q
    |||| |||| || ||||||||| |||||||||||||| ||||||||||||||| ||| |||||||  ||| ||| ||||| |||||| |||||||    
T  33647918 aatcttggagaatcaaaagaggaggctcttgggaaaagggttggtgccttttgaggagagattcacgaggttggaaaacatatgagtagagagtc 33648012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 42261609 - 42261524
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctc 215  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||| ||| ||||||| |||||| |  |||||||||| ||||||    
T  42261609 gagcttgttgaagctaatttcttgtaact-cttttgtatatctttgtaaagtactcattgatagtgaagcggagagatcattctctc 42261524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 42412121 - 42412161
Alignment:
Q  189 atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  42412121 atagtggattggagagatcaatctctcc-ccagagtaggtca 42412161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 4561137 - 4561180
Alignment:
Q  135 ttgttgaagctaatttcttgtaactaattttgtatctctttgtaa 179  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  4561137 ttgttgaagctaatttcttgtaac-atttttgtatctctttgtaa 4561180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 34811345 - 34811295
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaa 182  Q
    |||||||||||||||||||| ||||||||  |||| ||||||||||||||||    
T  34811345 gagcttgttgaagctaatttattgtaact-cttttatatctctttgtaagaa 34811295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 24197658 - 24197731
Alignment:
Q  29 aaccaaaagagggggctcttgggaaaaaggttggtgccttttgggga-agattcataggatgggaaacacatgag 102  Q
    |||||||||||||| |||||||| | | |||||||||||||||||||  || | || ||||||||||||||||||    
T  24197658 aaccaaaagaggggactcttggg-agagggttggtgccttttggggagggaatgatgggatgggaaacacatgag 24197731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 121; Significance: 7e-62; HSPs: 2)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 129 - 374
Target Start/End: Original strand, 7370 - 7616
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||    
T  7370 gtgagcttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactcattgatagtggattggaaagatcaatctctcctctagagtagg 7468  T
Q  228 tcattgttggaccgaactagatgaacatttcttggtgttgttatcttttctctacnnnnnnnatcttgtttatcctttggttagattgtggtttttctat 327  Q
    | |  ||||||||||||| | |||||||||||||||||||||||||||||| |||       ||||||||||||||||||||  ||||||||||| ||||    
T  7469 ttaa-gttggaccgaactgggtgaacatttcttggtgttgttatcttttctttactctctttatcttgtttatcctttggttgaattgtggttttgctat 7567  T
Q  328 gcacttgttttctagactagatc--tagattgttgttattgcttgtggt 374  Q
    ||||||| ||| |||||||| ||  || ||| ||||| |||||||||||    
T  7568 gcacttggtttatagactaggtctatatattattgttgttgcttgtggt 7616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 7077 - 7192
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||  || ||| ||||||||||||||||||||| |||     
T  7077 aatcttggagaaccaaaagagggggctcttgtgaaaagggttggtgccttttggggaagattcatggggttggaaaacacatgagtggagagtcttttgt 7176  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  7177 gagcaacttgggtgag 7192  T

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Target: scaffold0236 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 143 - 397
Target Start/End: Original strand, 10546 - 10800
Alignment:
Q  143 gctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    |||||||| ||||||| | |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||  |||||||||    
T  10546 gctaatttattgtaacca-ttttgtatctctttgtaagaactcgttgatagtggattgaagagatcaatctctcctccagagtaggtca-agttggaccg 10643  T
Q  242 aactagatgaacatttcttggtgttgttatcttttctctac-nnnnnnnatcttgtttatcctttggttagattgtggtttttctatgcacttgttttct 340  Q
    |||| | | ||||||||||||||||||||||||| ||||||        ||||||||||| ||||| ||||||||| ||||| |||| |||||| |||||    
T  10644 aactgggtaaacatttcttggtgttgttatctttcctctactctcttttatcttgtttattctttgattagattgtagttttactatacacttgatttct 10743  T
Q  341 agactagatctagattgttgttattgcttgtggtaatttacatttggttattggttg 397  Q
    ||| || ||||||||||||||| ||||||||||| |||| | ||||||||| |||||    
T  10744 agattaaatctagattgttgttgttgcttgtggttattttcttttggttatcggttg 10800  T

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Target: scaffold0219 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 257
Target Start/End: Complemental strand, 27566 - 27439
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaag-aactcatt-atagtggattggagagatcaatctctcctccagagtaggt 228  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||  |||| ||| |||||||||||||||||||||||||||| ||| |||||||    
T  27566 gagcttgttgaagctaatttcttgtaactcattt-gtatctctttgtaaataacttattgatagtggattggagagatcaatctctcccccatagtaggt 27468  T
Q  229 cattgttggaccgaactagatgaacattt 257  Q
    ||||||||||||||| ||| | |||||||    
T  27467 cattgttggaccgaattaggtaaacattt 27439  T

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Target: scaffold0286 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 11612 - 11725
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  11612 aagctaatttcttgtaactcattt-gtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 11710  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  11711 cgaactgggtgaaca 11725  T

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Target: scaffold0286; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 11307 - 11422
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| |||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||  || ||||||||||||||||||||||||  ||      
T  11307 aatcttggagaaccaaaagatggggctcttggggaaagggttggtgccttttggagaagattcatggggttgggaaacacatgagtggagagtcatttct 11406  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  11407 gagcaacttgggtgag 11422  T

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Target: scaffold0014 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 80702 - 80587
Alignment:
Q  19 aatcatggataaccaaaagagggggctcttgggaaaaaggttggtgccttttggggaagattcat-aggatgggaaacacatgagtggagagtctattga 117  Q
    |||| |||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||||||  || ||||||||||||||| ||||||||| |||     
T  80702 aatcttggagaaccaaaagagggggctcttatgaaaagggttggtgccttttggggaagattcatggggttgggaaacacatgagcggagagtcttttgt 80603  T
Q  118 gagcaacttgggtgag 133  Q
    ||||||||||||||||    
T  80602 gagcaacttgggtgag 80587  T

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Target: scaffold0014; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 80408 - 80351
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcat 187  Q
    |||||||||||||||||||||||||| |||  | ||||||||| |||||||||||||||    
T  80408 gtgagcttgttgaagctaatttcttgcaaccca-tttgtatctttttgtaagaactcat 80351  T

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Target: scaffold0016 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 114657 - 114770
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |   || |||    
T  114657 aagctaatttcttgtaacgc-ttttgtatctctttgtaagaactcattgatagtggattggagagatcaatctctcctccagagtaggttaagtttagac 114755  T
Q  240 cgaactagatgaaca 254  Q
    |||||| ||||||||    
T  114756 cgaactggatgaaca 114770  T

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Target: scaffold0002 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 434588 - 434701
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  434588 aagctaatttcttgtaaccc-ttttgtatctctttgtaagaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 434686  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  434687 cgaactgggtgaaca 434701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 490444 - 490359
Alignment:
Q  131 gagcttgttgaagctaatttcttgtaactaattttgtatctctttgt-aagaactcatt-atagtggattggagagatcaatctctc 215  Q
    |||||||||||||||||||||||||||||  |||||||| ||||||| ||| ||||||| |||||| |  |||||||||| ||||||    
T  490444 gagcttgttgaagctaatttcttgtaact-cttttgtatatctttgtaaagtactcattgatagtgaagcggagagatcattctctc 490359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 245
Target Start/End: Complemental strand, 149219 - 149107
Alignment:
Q  132 agcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtca 230  Q
    |||||||||||||||||||||||| ||  ||||  |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |    
T  149219 agcttgttgaagctaatttcttgttacccattta-tatctctttgtaagaactcattgatagtggattggagagatcaatctctcccccagagtaggtta 149121  T
Q  231 ttgttggaccgaact 245  Q
      |||||||||||||    
T  149120 -agttggaccgaact 149107  T

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Target: scaffold0066 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Complemental strand, 20540 - 20425
Alignment:
Q  129 gtgagcttgttgaagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtagg 227  Q
    |||| |||||||||||||||||||||||||  |||| |||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||| ||||    
T  20540 gtgaacttgttgaagctaatttcttgtaacccattt-gtatctctttgtaagaactctttgatattggattggagagatcaatctctcccccagattagg 20442  T
Q  228 tcattgttggaccgaact 245  Q
    |||  |||||||||||||    
T  20441 tca-agttggaccgaact 20425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 141 - 254
Target Start/End: Original strand, 971 - 1083
Alignment:
Q  141 aagctaatttcttgtaactaattttgtatctctttgtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggac 239  Q
    ||||||||||||||||||   ||||||||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||   ||||||    
T  971 aagctaatttcttgtaaccc-ttttgtatctctttg-aacaactcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggac 1068  T
Q  240 cgaactagatgaaca 254  Q
    |||||| | ||||||    
T  1069 cgaactgggtgaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 8846 - 8735
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    |||||||||||||||   |||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  8846 ctaatttcttgtaaccc-ttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 8748  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  8747 aactgggtgaaca 8735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 144 - 254
Target Start/End: Complemental strand, 11272 - 11161
Alignment:
Q  144 ctaatttcttgtaactaattttgtatctcttt-gtaagaactcatt-atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccg 241  Q
    |||||||||||||||   |||||||||||||| |||||||||| || |||||||||||||||| |||||||||||||||||||||||||   ||||||||    
T  11272 ctaatttcttgtaaccc-ttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccg 11174  T
Q  242 aactagatgaaca 254  Q
    |||| | ||||||    
T  11173 aactgggtgaaca 11161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 3804 - 3735
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  |||||||||||||||| |||||||||||||||||||||||||   ||||||||||||    
T  3804 aagaactcatttgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaact 3735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 2682 - 2604
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    |||||||||||  ||||||||||||||||  ||||||||||||||||||||||||   |||||||||||| | ||||||    
T  2682 aagaactcatttgatagtggattggagagtacaatctctcctccagagtaggtcaagtttggaccgaactgggtgaaca 2604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 290 - 359
Target Start/End: Complemental strand, 1360 - 1291
Alignment:
Q  290 atcttgtttatcctttggttagattgtggtttttctatgcacttgttttctagactagatctagattgtt 359  Q
    ||||| |||||  ||||||| |||||||||||| || | |||||| |||||||| |||||||||||||||    
T  1360 atcttatttattttttggtttgattgtggttttactttacacttggtttctagattagatctagattgtt 1291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 245
Target Start/End: Original strand, 6363 - 6432
Alignment:
Q  178 aagaactcatt--atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 245  Q
    |||||||||||  ||||||||||||||||  ||| |||||||||||||||||| |   ||||||||||||    
T  6363 aagaactcatttgatagtggattggagagtacaaactctcctccagagtaggttaagtttggaccgaact 6432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 7025 - 6981
Alignment:
Q  210 tctctcctccagagtaggtcattgttggaccgaactagatgaaca 254  Q
    ||||||||| ||||||||||||| |||||||||||| ||| ||||    
T  7025 tctctcctctagagtaggtcattattggaccgaactggataaaca 6981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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