View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19184_high_8 (Length: 334)
Name: NF19184_high_8
Description: NF19184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19184_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 3 - 302
Target Start/End: Original strand, 50748647 - 50748946
Alignment:
| Q |
3 |
atttcactgatgatatccgtatttagatgttgaaataacatatttgttttatgtttagtaacggtggttcaatcttcaatgaaaacaacgaagattgaaa |
102 |
Q |
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| T |
50748647 |
atttcaccgatcatatcggtatttagatgttgaaataacacatttattttatgtttagtaacggtgattcaatcttcaatgaaaacaacgacgattgaaa |
50748746 |
T |
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| Q |
103 |
agtgaaatctaagttaagaccacattatacatggtaaaagaaattatatgatatttttgtataacatttctcgtgaccagttgaaaacatcccattagtg |
202 |
Q |
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| T |
50748747 |
agtgaaatctaagttaagaccacattatacatggtaaaagaaattatataatatttttgtataacatttctcgtgaccagttgaaaacatcccattagtg |
50748846 |
T |
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| Q |
203 |
gaaagttataagattgatttgcagttaattgttttaataattgatccttcttacttagaaaagattttattgataatggaagtggtctctaagcttttgc |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50748847 |
gaaagttataagattgatttgcagttaattgttttaataattgatccttcttgcttagaaaagattttattgataatggaagtggtctctaagcttttgc |
50748946 |
T |
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