View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19184_low_14 (Length: 251)

Name: NF19184_low_14
Description: NF19184
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19184_low_14
NF19184_low_14
[»] chr7 (50 HSPs)
chr7 (10-154)||(48079497-48079641)
chr7 (160-234)||(48079674-48079748)
chr7 (160-233)||(22760894-22760967)
chr7 (160-223)||(26459392-26459455)
chr7 (73-154)||(11338213-11338294)
chr7 (173-234)||(18056746-18056807)
chr7 (179-234)||(13106753-13106808)
chr7 (167-234)||(25590649-25590716)
chr7 (160-234)||(2446339-2446413)
chr7 (160-234)||(5668542-5668616)
chr7 (160-234)||(20335802-20335876)
chr7 (73-154)||(5864174-5864255)
chr7 (179-234)||(279925-279980)
chr7 (179-234)||(11700215-11700269)
chr7 (188-234)||(4572268-4572314)
chr7 (88-154)||(5185550-5185616)
chr7 (160-234)||(5579205-5579279)
chr7 (160-234)||(21877839-21877913)
chr7 (160-234)||(22035429-22035503)
chr7 (160-234)||(23301573-23301647)
chr7 (160-234)||(43663066-43663140)
chr7 (173-234)||(7309400-7309460)
chr7 (173-234)||(15137597-15137658)
chr7 (160-209)||(23552149-23552198)
chr7 (160-209)||(43215215-43215264)
chr7 (160-228)||(17040989-17041057)
chr7 (174-234)||(21558173-21558233)
chr7 (160-224)||(39631875-39631939)
chr7 (188-232)||(41907615-41907659)
chr7 (160-232)||(45709681-45709753)
chr7 (159-214)||(7721399-7721454)
chr7 (167-234)||(9183162-9183229)
chr7 (179-214)||(16964276-16964311)
chr7 (165-224)||(17113831-17113890)
chr7 (160-223)||(25655210-25655273)
chr7 (160-231)||(29385717-29385788)
chr7 (160-231)||(38374573-38374644)
chr7 (160-210)||(3174958-3175008)
chr7 (160-234)||(7801211-7801285)
chr7 (160-234)||(11720931-11721005)
chr7 (180-234)||(30579386-30579440)
chr7 (179-221)||(49050475-49050517)
chr7 (179-224)||(7744093-7744138)
chr7 (159-231)||(33460396-33460469)
chr7 (181-234)||(41487411-41487464)
chr7 (173-234)||(41519081-41519142)
chr7 (160-208)||(30442519-30442567)
chr7 (160-224)||(33222401-33222465)
chr7 (160-204)||(48771969-48772013)
chr7 (160-212)||(48959229-48959281)
[»] chr3 (46 HSPs)
chr3 (160-234)||(10445110-10445184)
chr3 (73-154)||(31996616-31996697)
chr3 (160-234)||(4844482-4844556)
chr3 (160-234)||(4870178-4870252)
chr3 (160-234)||(51903849-51903923)
chr3 (160-234)||(31520576-31520650)
chr3 (160-234)||(44743826-44743900)
chr3 (160-234)||(20501727-20501800)
chr3 (160-224)||(28703385-28703449)
chr3 (160-224)||(30311337-30311401)
chr3 (99-154)||(9509223-9509278)
chr3 (99-154)||(9517198-9517253)
chr3 (160-231)||(12761543-12761614)
chr3 (159-230)||(47236946-47237017)
chr3 (165-224)||(53412981-53413040)
chr3 (160-234)||(10499080-10499154)
chr3 (160-214)||(14186679-14186732)
chr3 (88-154)||(17619512-17619578)
chr3 (160-234)||(19716228-19716302)
chr3 (160-209)||(21960582-21960631)
chr3 (160-209)||(27259192-27259241)
chr3 (160-224)||(15048042-15048106)
chr3 (174-234)||(30232375-30232435)
chr3 (160-224)||(37788446-37788510)
chr3 (179-230)||(8796068-8796119)
chr3 (168-223)||(27093343-27093398)
chr3 (168-231)||(47810718-47810781)
chr3 (160-234)||(8075098-8075172)
chr3 (160-234)||(25035736-25035810)
chr3 (160-234)||(28531029-28531103)
chr3 (160-234)||(30510170-30510244)
chr3 (167-221)||(31608508-31608562)
chr3 (168-234)||(33899653-33899719)
chr3 (173-231)||(44069802-44069860)
chr3 (173-207)||(47454615-47454649)
chr3 (162-208)||(52769980-52770026)
chr3 (160-209)||(2667893-2667942)
chr3 (167-224)||(3427534-3427591)
chr3 (160-221)||(8051245-8051306)
chr3 (160-221)||(11612330-11612391)
chr3 (160-209)||(32651434-32651483)
chr3 (179-224)||(34062529-34062574)
chr3 (168-209)||(36720420-36720461)
chr3 (73-154)||(37045825-37045906)
chr3 (160-209)||(39253728-39253777)
chr3 (187-232)||(46576398-46576443)
[»] chr1 (58 HSPs)
chr1 (44-154)||(48532744-48532854)
chr1 (173-234)||(51814538-51814599)
chr1 (179-234)||(16893444-16893499)
chr1 (88-154)||(6575048-6575114)
chr1 (160-234)||(12587301-12587374)
chr1 (160-232)||(31383771-31383843)
chr1 (160-231)||(43445994-43446065)
chr1 (167-224)||(2799900-2799957)
chr1 (160-213)||(12370194-12370247)
chr1 (159-224)||(40810497-40810562)
chr1 (160-224)||(8177163-8177227)
chr1 (160-224)||(9165176-9165240)
chr1 (160-231)||(31605822-31605893)
chr1 (164-231)||(40257434-40257501)
chr1 (167-234)||(42983345-42983412)
chr1 (160-234)||(1094556-1094630)
chr1 (160-234)||(6122825-6122899)
chr1 (160-214)||(17745247-17745301)
chr1 (167-221)||(33700757-33700811)
chr1 (162-231)||(39966126-39966195)
chr1 (173-234)||(42949263-42949324)
chr1 (168-224)||(3265963-3266019)
chr1 (160-208)||(15786317-15786365)
chr1 (159-207)||(17410261-17410309)
chr1 (160-228)||(18459208-18459276)
chr1 (190-234)||(23471056-23471100)
chr1 (160-224)||(36371501-36371565)
chr1 (179-231)||(45266884-45266936)
chr1 (173-224)||(8904458-8904509)
chr1 (160-207)||(16169976-16170023)
chr1 (160-234)||(17297015-17297090)
chr1 (159-234)||(18037584-18037659)
chr1 (179-234)||(19088259-19088314)
chr1 (160-231)||(21547454-21547525)
chr1 (160-231)||(34228905-34228975)
chr1 (165-223)||(1247149-1247207)
chr1 (188-234)||(4280422-4280468)
chr1 (160-222)||(9117150-9117212)
chr1 (160-234)||(10526854-10526928)
chr1 (160-230)||(19940847-19940917)
chr1 (160-234)||(50901613-50901686)
chr1 (181-210)||(2220024-2220053)
chr1 (160-209)||(4566579-4566628)
chr1 (187-232)||(7766829-7766874)
chr1 (187-232)||(8077697-8077742)
chr1 (187-232)||(9500457-9500502)
chr1 (187-232)||(15059504-15059549)
chr1 (187-232)||(18646903-18646948)
chr1 (173-234)||(21392881-21392942)
chr1 (180-221)||(29753700-29753741)
chr1 (189-234)||(42858608-42858653)
chr1 (161-234)||(44126427-44126500)
chr1 (173-234)||(44961809-44961870)
chr1 (173-222)||(51281395-51281444)
chr1 (174-234)||(3799951-3800011)
chr1 (158-234)||(10150840-10150916)
chr1 (173-213)||(19528319-19528359)
chr1 (173-217)||(26232349-26232393)
[»] chr8 (35 HSPs)
chr8 (74-155)||(28597647-28597728)
chr8 (160-234)||(968393-968467)
chr8 (17-154)||(23554293-23554431)
chr8 (160-234)||(29431042-29431116)
chr8 (160-239)||(35690030-35690109)
chr8 (160-234)||(2203523-2203597)
chr8 (160-207)||(16852371-16852418)
chr8 (88-154)||(11852150-11852216)
chr8 (160-234)||(18540329-18540403)
chr8 (164-234)||(28783095-28783165)
chr8 (160-234)||(29858020-29858094)
chr8 (160-212)||(3624611-3624663)
chr8 (160-224)||(33017245-33017309)
chr8 (159-234)||(30774707-30774782)
chr8 (160-234)||(6536551-6536625)
chr8 (160-234)||(7140740-7140813)
chr8 (160-234)||(8485030-8485104)
chr8 (160-234)||(11819807-11819881)
chr8 (167-234)||(11492044-11492111)
chr8 (159-222)||(13129698-13129761)
chr8 (160-207)||(19703485-19703532)
chr8 (160-211)||(22193358-22193409)
chr8 (158-212)||(18546355-18546409)
chr8 (168-234)||(23361620-23361686)
chr8 (180-214)||(31087249-31087283)
chr8 (88-154)||(33694072-33694138)
chr8 (173-227)||(35287760-35287814)
chr8 (168-210)||(35641896-35641938)
chr8 (160-234)||(44780085-44780159)
chr8 (173-206)||(11928730-11928763)
chr8 (160-205)||(27750761-27750806)
chr8 (160-224)||(12988459-12988523)
chr8 (173-221)||(28540466-28540514)
chr8 (190-234)||(31843850-31843894)
chr8 (174-234)||(43594289-43594349)
[»] chr4 (53 HSPs)
chr4 (17-148)||(26442693-26442825)
chr4 (160-234)||(37274430-37274504)
chr4 (73-154)||(35420220-35420301)
chr4 (160-224)||(37109332-37109396)
chr4 (160-231)||(23377987-23378058)
chr4 (160-234)||(19238548-19238622)
chr4 (160-234)||(28635727-28635801)
chr4 (160-234)||(55427171-55427245)
chr4 (160-231)||(46295128-46295199)
chr4 (160-234)||(7949425-7949499)
chr4 (160-234)||(51954145-51954219)
chr4 (160-221)||(2622379-2622440)
chr4 (179-231)||(2732044-2732096)
chr4 (73-154)||(37338750-37338833)
chr4 (160-224)||(38869799-38869863)
chr4 (160-227)||(32992643-32992710)
chr4 (160-207)||(39509101-39509148)
chr4 (88-154)||(45658415-45658481)
chr4 (160-222)||(46329195-46329257)
chr4 (160-234)||(51250493-51250567)
chr4 (73-154)||(30256201-30256282)
chr4 (173-234)||(51622529-51622590)
chr4 (160-224)||(2185013-2185077)
chr4 (160-224)||(7292779-7292843)
chr4 (188-232)||(9517743-9517787)
chr4 (174-230)||(19229183-19229239)
chr4 (190-234)||(27104999-27105043)
chr4 (159-207)||(30938217-30938265)
chr4 (173-224)||(4249221-4249272)
chr4 (167-234)||(20770949-20771016)
chr4 (179-234)||(32662804-32662859)
chr4 (179-234)||(43124670-43124725)
chr4 (163-210)||(49576889-49576936)
chr4 (160-234)||(8030175-8030249)
chr4 (160-214)||(13015458-13015512)
chr4 (184-234)||(22096579-22096629)
chr4 (175-221)||(33619252-33619298)
chr4 (190-231)||(8034843-8034884)
chr4 (173-230)||(15729526-15729583)
chr4 (160-221)||(19680772-19680833)
chr4 (168-221)||(24124039-24124092)
chr4 (160-201)||(24827856-24827897)
chr4 (187-232)||(34844860-34844905)
chr4 (187-232)||(40058954-40058999)
chr4 (187-232)||(49287908-49287953)
chr4 (187-232)||(52983669-52983714)
chr4 (160-224)||(1730470-1730534)
chr4 (160-224)||(16581724-16581788)
chr4 (164-212)||(17618316-17618364)
chr4 (182-222)||(23284241-23284281)
chr4 (174-234)||(35644133-35644193)
chr4 (186-222)||(46174367-46174403)
chr4 (179-207)||(47044767-47044795)
[»] chr6 (27 HSPs)
chr6 (160-234)||(6385893-6385967)
chr6 (160-234)||(31622962-31623036)
chr6 (160-234)||(33549135-33549209)
chr6 (150-224)||(23910094-23910166)
chr6 (73-154)||(902845-902926)
chr6 (160-210)||(12234502-12234552)
chr6 (160-234)||(20213072-20213146)
chr6 (160-234)||(22107095-22107169)
chr6 (167-221)||(30127438-30127492)
chr6 (160-234)||(34444834-34444908)
chr6 (190-234)||(2484781-2484825)
chr6 (160-224)||(12188284-12188348)
chr6 (159-207)||(16405115-16405163)
chr6 (179-231)||(24333999-24334051)
chr6 (179-234)||(8597718-8597773)
chr6 (179-214)||(9626082-9626117)
chr6 (160-234)||(3172739-3172813)
chr6 (160-234)||(14557993-14558066)
chr6 (160-210)||(19162814-19162864)
chr6 (187-232)||(1344985-1345030)
chr6 (188-221)||(6691535-6691568)
chr6 (160-205)||(10338174-10338219)
chr6 (187-232)||(11448921-11448966)
chr6 (159-208)||(12216774-12216823)
chr6 (173-214)||(28841458-28841499)
chr6 (189-234)||(32250821-32250866)
chr6 (188-224)||(11306155-11306191)
[»] chr2 (36 HSPs)
chr2 (160-234)||(42327366-42327440)
chr2 (73-154)||(18488315-18488396)
chr2 (160-234)||(19244140-19244214)
chr2 (160-231)||(21213800-21213871)
chr2 (160-234)||(12086100-12086174)
chr2 (160-234)||(37480106-37480180)
chr2 (160-234)||(42602585-42602659)
chr2 (164-234)||(42860383-42860453)
chr2 (173-234)||(33569829-33569890)
chr2 (179-234)||(2311774-2311829)
chr2 (159-234)||(25637181-25637256)
chr2 (159-234)||(29503301-29503375)
chr2 (160-207)||(39715023-39715070)
chr2 (160-221)||(23140896-23140957)
chr2 (160-221)||(23552686-23552747)
chr2 (160-212)||(4262295-4262347)
chr2 (158-234)||(27244337-27244413)
chr2 (160-227)||(7799013-7799080)
chr2 (159-222)||(33839243-33839306)
chr2 (168-234)||(19016070-19016136)
chr2 (160-234)||(37755942-37756016)
chr2 (167-224)||(14500315-14500372)
chr2 (160-209)||(33582004-33582053)
chr2 (160-204)||(28846722-28846766)
chr2 (190-234)||(37971956-37972000)
chr2 (160-223)||(42922445-42922509)
chr2 (179-234)||(2295962-2296017)
chr2 (159-206)||(32687511-32687558)
chr2 (160-223)||(40416372-40416435)
chr2 (188-234)||(14780565-14780611)
chr2 (160-234)||(23052494-23052568)
chr2 (160-234)||(26482124-26482197)
chr2 (160-234)||(29197347-29197421)
chr2 (160-234)||(41504907-41504981)
chr2 (173-234)||(360714-360775)
chr2 (159-224)||(19322798-19322863)
[»] scaffold0258 (1 HSPs)
scaffold0258 (160-234)||(15294-15368)
[»] chr5 (32 HSPs)
chr5 (160-234)||(16773838-16773912)
chr5 (160-224)||(14285192-14285256)
chr5 (164-234)||(30109280-30109349)
chr5 (160-224)||(34984837-34984901)
chr5 (187-234)||(38299591-38299638)
chr5 (160-234)||(84855-84929)
chr5 (160-234)||(22020833-22020907)
chr5 (160-234)||(29075812-29075886)
chr5 (160-221)||(14495789-14495850)
chr5 (173-234)||(27840990-27841051)
chr5 (159-199)||(4793094-4793134)
chr5 (168-224)||(25627096-25627152)
chr5 (160-232)||(30883171-30883243)
chr5 (181-221)||(35360070-35360110)
chr5 (167-234)||(87395-87461)
chr5 (159-234)||(12877723-12877798)
chr5 (179-234)||(17155872-17155927)
chr5 (160-231)||(21589319-21589390)
chr5 (167-234)||(43442234-43442301)
chr5 (160-234)||(8278246-8278320)
chr5 (88-154)||(15863250-15863316)
chr5 (174-228)||(18974005-18974059)
chr5 (180-234)||(30000167-30000221)
chr5 (188-234)||(35705045-35705091)
chr5 (160-234)||(39327062-39327135)
chr5 (179-224)||(7918450-7918495)
chr5 (160-221)||(9842830-9842891)
chr5 (187-232)||(18207257-18207302)
chr5 (173-234)||(29173534-29173595)
chr5 (179-207)||(17675759-17675787)
chr5 (173-221)||(31074276-31074324)
chr5 (160-224)||(37258347-37258411)
[»] scaffold0299 (1 HSPs)
scaffold0299 (160-222)||(11559-11621)
[»] scaffold0180 (1 HSPs)
scaffold0180 (160-224)||(19943-20007)
[»] scaffold0194 (1 HSPs)
scaffold0194 (167-230)||(13021-13084)
[»] scaffold0032 (1 HSPs)
scaffold0032 (167-234)||(112320-112387)
[»] scaffold0368 (1 HSPs)
scaffold0368 (173-234)||(14936-14997)
[»] scaffold0008 (1 HSPs)
scaffold0008 (173-234)||(49350-49411)
[»] scaffold0238 (1 HSPs)
scaffold0238 (179-223)||(2693-2737)
[»] scaffold0047 (1 HSPs)
scaffold0047 (190-234)||(14943-14987)
[»] scaffold0021 (1 HSPs)
scaffold0021 (167-234)||(156960-157025)
[»] scaffold0118 (1 HSPs)
scaffold0118 (179-234)||(41604-41659)
[»] scaffold0211 (1 HSPs)
scaffold0211 (160-234)||(24084-24158)
[»] scaffold0074 (1 HSPs)
scaffold0074 (160-214)||(45750-45804)
[»] scaffold1367 (1 HSPs)
scaffold1367 (160-209)||(836-885)
[»] scaffold0471 (1 HSPs)
scaffold0471 (168-221)||(8626-8679)
[»] scaffold0006 (1 HSPs)
scaffold0006 (174-227)||(18344-18397)
[»] scaffold0002 (1 HSPs)
scaffold0002 (160-221)||(94955-95016)
[»] scaffold0291 (1 HSPs)
scaffold0291 (167-207)||(2468-2508)


Alignment Details
Target: chr7 (Bit Score: 129; Significance: 7e-67; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 10 - 154
Target Start/End: Original strand, 48079497 - 48079641
Alignment:
Q  10 attatactgtttgggtattggttgatgctagtattttgtaattacttgtcagactctttgtaattgagcgtcctctttagtacatcttgtgcttaagagg 109  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48079497 attatattgtttgggtatcggttgatgctagtattttgtaattacttgtcagactctttgtaattgagcgtcctctttagtacatcttgtgcttaagagg 48079596  T
Q  110 cgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||    
T  48079597 cgtctctgtttttgttaatatgttccattttagtttcttaaaaaa 48079641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 48079674 - 48079748
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  48079674 ttgggacctgggtgtgtggtcctgctcgaggtctcaggtttgattctctccggtgctaatttgagtgggctaatt 48079748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 233
Target Start/End: Original strand, 22760894 - 22760967
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaat 233  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||    
T  22760894 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctccccgatgccaatttgagtgggctaat 22760967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 26459455 - 26459392
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 223  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||||||    
T  26459455 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttga 26459392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 11338294 - 11338213
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||| |||||||||||||| ||||||||| |||||||||||  || ||||  |||||| ||||||||||||||| |||||    
T  11338294 ttgagcttcctctttagtacaccttgtgcttcagaggcgtctccattattgtttatatatcccattttagtttcttcaaaaa 11338213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 18056807 - 18056746
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||||||  |||||||||||||||||||| |||||||||||||| |||||||||||    
T  18056807 gtgtgctcctcctgaaggtctcaggttcgattctccccggtgctaatttgggtgggctaatt 18056746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 13106808 - 13106753
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| |||||||||||||||||||||| | |||||||||||| |||||||||    
T  13106808 tcctcctcaaggtctcaggttcgattctctctgatgctaatttgagcgggctaatt 13106753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 25590649 - 25590716
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||| |||||||||||||||| ||||||||| ||| |||||  ||||||||||||||||||    
T  25590649 ctgggagtgtgctcctcctcgaggtctcgggttcgattttcttcggtgtcaatttgagtgggctaatt 25590716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 2446339 - 2446413
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| ||||||||||| ||||| |||||||||||||||||||  ||||  |||||||||||    
T  2446339 ttgggacttgggagtgtgctcctcctcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatt 2446413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 5668616 - 5668542
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||  ||||| ||||||||||||||||||| |||||||||||||| | ||||||  |||||||||||    
T  5668616 ttgggacatggaagtgtgctcctcctcgaggtctcaggatcgattctctccggagttaatttatgtgggctaatt 5668542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 20335876 - 20335802
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||||||| ||| ||  ||||||  ||||||||||    
T  20335876 ttgggacttgggagtgtgctcctcctcgaggtctcaggttcgattctcaccgatgtcaatttggatgggctaatt 20335802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 5864255 - 5864174
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||||||||||||| |||| ||| ||||| |||||| |||| ||| |||| ||||||||| |||||  ||||||||||||    
T  5864255 ttgagcgtcctctttaatacaccttatgcttgagaggcatctccgttattgttaatatattctatttttctttcttaaaaaa 5864174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 279980 - 279925
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||  ||||||||||||| |||||||||||||| |||||| |||||||||||    
T  279980 tcctccttaaggtctcaggttcaattctctccggtgccaatttgggtgggctaatt 279925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 11700215 - 11700269
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| ||||||||||||||||||||| | |||| ||||||||||||||||||    
T  11700215 tcctcctcaaggtctcaggttcgattctct-ctgtgccaatttgagtgggctaatt 11700269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 4572314 - 4572268
Alignment:
Q  188 aggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||    
T  4572314 aggtctcaggttcgattctctccggtgtcaatttgggtgggctaatt 4572268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 5185550 - 5185616
Alignment:
Q  88 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||| ||||||||||| ||||||||| ||| || | |||||||| |||||||||||||| |||||    
T  5185550 agtacaccttgtgcttaaaaggcgtctcggttgttattaatatatttcattttagtttctttaaaaa 5185616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 5579279 - 5579205
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||| || ||||| |||||||| |||||||||||| || |||| ||||||| |||||| ||||| |||||    
T  5579279 ttgggaccttggagtgtgctcctcctcaaggtctcaggtttgactctccccggtgccaatttgggtgggataatt 5579205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 21877839 - 21877913
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| | ||| |||||||  |||||||| |||||||||||  |||||| || |||||||||||||||    
T  21877839 ttgggacctgggagggtgctcctccttaaggtctcacgttcgattctccacggtgccaaattgagtgggctaatt 21877913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 22035429 - 22035503
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||| | ||||| |||||||||||| | ||||||||||||||||| |||  ||||| ||||| ||||||    
T  22035429 ttgggacctgagagtgtgctcctcctcgaggacccaggttcgattctctcctgtgtcaatttaagtggactaatt 22035503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 23301647 - 23301573
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| ||||||| ||||||||| ||| ||||||||   |||||||||||||||| ||||||    
T  23301647 ttgggacttgggagtgtgctcctccttgaggtctcaagtttgattctctttagtgctaatttgagtggactaatt 23301573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 43663140 - 43663066
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||| || | ||||||||||||||| |||||||||||| ||||||||||   |||||| |||| ||||||    
T  43663140 ttgggacctaggagcgtggtcctcctcgagatctcaggttcgaatctctccggtatcaatttgggtggactaatt 43663066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 7309400 - 7309460
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||||||||||||||| |||||||||||||| |||  ||||| ||||||||||||    
T  7309400 gtgtgctcctcctcgaggtctcaagttcgattctctcc-gtgtcaatttaagtgggctaatt 7309460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 15137597 - 15137658
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||||||| |||||||||||| ||||||||| ||||  |||||| |||||||||||    
T  15137597 gtgtgctcctcctcaaggtctcaggttagattctctctggtgtcaatttgggtgggctaatt 15137658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 23552149 - 23552198
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||||||||||| ||||| |||||||| |||||||| |||||||||||||    
T  23552149 ttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctc 23552198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 43215215 - 43215264
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    ||||||||| || ||||| |||||||| ||||||||||||||||||||||    
T  43215215 ttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctc 43215264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 17041057 - 17040989
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtggg 228  Q
    |||||| ||||  ||||| |||||||| ||||||||||||||||||||||  |||| |||||| |||||    
T  17041057 ttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctcaagtgccaatttgggtggg 17040989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 21558173 - 21558233
Alignment:
Q  174 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| |||||||| |||||||||||||||||||||| ||||| |||||  ||||| |||||    
T  21558173 tgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttaggtgggttaatt 21558233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 39631875 - 39631939
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||||||| ||  | |||||||| ||||||||||||||||||||||  |||| ||||||||    
T  39631875 ttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctcttgtgccaatttgag 39631939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 41907659 - 41907615
Alignment:
Q  188 aggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||    
T  41907659 aggtctcaggttcgattctctctggtgccaatttcagtgggctaa 41907615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 45709753 - 45709681
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    |||||| ||| | ||||| |||||||||||||||||||||||||| |||||| | | |||||  |||||||||    
T  45709753 ttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctccgataccaatttaggtgggctaa 45709681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 7721399 - 7721454
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 214  Q
    ||||||||||||| ||||  |||||||| |||||||| ||||||||||||| ||||    
T  7721399 tttgggacctgggagtgtactcctcctcaaggtctcatgttcgattctctctggtg 7721454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 9183229 - 9183162
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||| |||||||| | ||||||||||||||| |||| ||||  |||||| |||||||||||    
T  9183229 ctgggagtgtgctcctcctcaaagtctcaggttcgattatctctggtgtcaatttgggtgggctaatt 9183162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 16964276 - 16964311
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtg 214  Q
    ||||||||||||||||||| ||||||||||||||||    
T  16964276 tcctcctcgaggtctcaggatcgattctctccggtg 16964311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 17113831 - 17113890
Alignment:
Q  165 acctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||||| ||||| | |||||| |||||||| ||||||||||||| | ||||||||||||    
T  17113831 acctgggagtgtgcttctcctcaaggtctcaagttcgattctctctgatgctaatttgag 17113890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 25655273 - 25655210
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 223  Q
    |||||| ||| | ||||| |||||||| |||| ||||||||||||||||| ||||| |||||||    
T  25655273 ttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctggtgccaatttga 25655210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 29385788 - 29385717
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||||| | || ||||| |||||||| |||||||||||| ||||||||  ||||| |||||| ||||||||    
T  29385788 ttgggactttggagtgtgctcctcctcaaggtctcaggtttgattctctttggtgccaatttgggtgggcta 29385717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 38374644 - 38374573
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||||  | ||||| |||||||| |||||| ||||||||||||| ||||||| |||||  ||||||||    
T  38374644 ttgggaccttagagtgtgctcctcctcaaggtcttaggttcgattctccccggtgccaatttaggtgggcta 38374573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 3174958 - 3175008
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 210  Q
    |||||| ||||| ||||| |||  |||||||||||||||||||||||||||    
T  3174958 ttgggatctgggagtgtgctccatctcgaggtctcaggttcgattctctcc 3175008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 7801211 - 7801285
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| ||||| || |||||||||||||||  | ||||| ||  ||||| ||||||||||||    
T  7801211 ttgggacctgggagtgtgctcctcttcaaggtctcaggttcgaacccctccgatgtcaatttaagtgggctaatt 7801285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 11721005 - 11720931
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||  |||| |||||||  |||| |||| |||||||||| || |||| |||||| |||||||||||    
T  11721005 ttgggacctgggaatgtgctcctccttaaggtatcagattcgattctccccagtgccaatttgggtgggctaatt 11720931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 30579386 - 30579440
Alignment:
Q  180 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| ||||||||||||||||| |||| ||||| |||||  |||||||||||    
T  30579386 cctcctcaaggtctcaggttcgattttctctggtgccaatttaggtgggctaatt 30579440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 49050517 - 49050475
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||||| ||||||||||||||||||||| ||||||| |||||    
T  49050517 tcctccttgaggtctcaggttcgattctccccggtgccaattt 49050475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 7744138 - 7744093
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||| |||||||||||| ||||||||| ||||| ||||||||    
T  7744138 tcctcctcaaggtctcaggtttgattctctctggtgcaaatttgag 7744093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 33460469 - 33460396
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcc-tcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||||| || |||||||||||| || ||||||||| |||||||||| ||||||  |||||  ||||||||    
T  33460469 tttgggacctaggagtgtggtcctccttcaaggtctcagattcgattctccccggtgtcaatttatgtgggcta 33460396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 41487411 - 41487464
Alignment:
Q  181 ctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| |||||||||||||||||||  ||||||| |||||  |||||||||||    
T  41487411 ctcctcaaggtctcaggttcgattcttcccggtgccaatttaggtgggctaatt 41487464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 41519142 - 41519081
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||| ||| ||||||||| ||||||| |||||||||  |||||| |||||||||||    
T  41519142 gtgtgctccttctcaaggtctcagattcgattatctccggtgtcaatttgggtgggctaatt 41519081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 30442519 - 30442567
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctct 208  Q
    |||||||||||| || || |||||||| |||||| ||||||||||||||    
T  30442519 ttgggacctgggagtttgctcctcctcaaggtctgaggttcgattctct 30442567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 33222401 - 33222465
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||||||  ||||  || ||||| |||||||||||||||||||||| ||||  ||||||||    
T  33222401 ttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctggtgtcaatttgag 33222465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 48771969 - 48772013
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgatt 204  Q
    |||||| ||||| ||||| ||||||| ||||||||||||||||||    
T  48771969 ttgggatctgggagtgtgctcctccttgaggtctcaggttcgatt 48772013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 48959229 - 48959281
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 212  Q
    |||||||||  | ||||| |||||||| |||||||| ||||||||||||||||    
T  48959229 ttgggacctatgagtgtgttcctcctcaaggtctcatgttcgattctctccgg 48959281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 10445184 - 10445110
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10445184 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgctaatttgagtgggctaatt 10445110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 31996616 - 31996697
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| ||| || | |||||||||||||||||||||||||||||    
T  31996616 ttgagcgtcctctttagtacaccttgtgcttaagaggcgcctcagttgttattaatatattccattttagtttcttaaaaaa 31996697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 4844556 - 4844482
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  4844556 ttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatt 4844482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 4870252 - 4870178
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||    
T  4870252 ttgggatctgggagtgtgctcctcctcgaggtctcaggatcgattctctccggtgccaatttgtgtgggctaatt 4870178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 51903923 - 51903849
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||    
T  51903923 ttgggatctgggagtgtgctcctcctcgtggtctcaggttcgattctctccggtgtcaatttgagtgggctaatt 51903849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 31520650 - 31520576
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| ||||||||||||||| ||||| |||||||||| |||  ||||||||||||||||||    
T  31520650 ttgggatctgggagtgtgctcctcctcgaggtcttaggtttgattctctccagtgtcaatttgagtgggctaatt 31520576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 44743900 - 44743826
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||| ||||| |||| |||||| ||||| |||||    
T  44743900 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattatctccagtgccaatttgggtgggttaatt 44743826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 20501727 - 20501800
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||| | ||||| |||||||  ||||||||||||||||||||||| |||| |||||||| |||||||||    
T  20501727 ttgggacctgagagtgtgctcctccttaaggtctcaggttcgattctctccagtgccaatttgag-gggctaatt 20501800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 28703449 - 28703385
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||| ||||| ||||| ||||| || |||||||||||||||||||||| ||||| ||||||||    
T  28703449 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctctggtgccaatttgag 28703385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 30311337 - 30311401
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||| ||||| ||||| |||||||| |||||||||||||||||||||  ||||| ||||||||    
T  30311337 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctctttggtgccaatttgag 30311401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 9509278 - 9509223
Alignment:
Q  99 tgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    ||||||| |||||||| |||| |||| ||||||| |||||||||||||||||||||    
T  9509278 tgcttaacaggcgtctttgttattgtgaatatataccattttagtttcttaaaaaa 9509223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 9517253 - 9517198
Alignment:
Q  99 tgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    ||||||| |||||||| |||| |||| ||||||| |||||||||||||||||||||    
T  9517253 tgcttaacaggcgtctttgttattgtgaatatataccattttagtttcttaaaaaa 9517198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 12761543 - 12761614
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||||||| ||||| ||||||| ||| |||||||||||||| || ||||||| |||||  ||||||||    
T  12761543 ttgggacctgggagtgtgttcctccttgagctctcaggttcgattttccccggtgccaatttaggtgggcta 12761614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 230
Target Start/End: Complemental strand, 47237017 - 47236946
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 230  Q
    ||||||||| ||| ||||| ||||| || |||||||| ||||||||||| ||||||| |||||| |||||||    
T  47237017 tttgggacccgggagtgtgctcctcttcaaggtctcatgttcgattctccccggtgccaatttgggtgggct 47236946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 224
Target Start/End: Original strand, 53412981 - 53413040
Alignment:
Q  165 acctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||||| ||||| |||||||| ||||||||||||| |||||||| ||||| ||||||||    
T  53412981 acctgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttgag 53413040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 10499154 - 10499080
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| || || || |||| ||||||||||||||||||||||||| ||  |||||| |||||||||||    
T  10499154 ttgggatctgggagtctgctcttccttgaggtctcaggttcgattctctccgatgtcaatttgggtgggctaatt 10499080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 14186679 - 14186732
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 214  Q
    |||||||||||  ||||| |||||||| |||||||||||||||||||||||||||    
T  14186679 ttgggacctgga-gtgtgctcctcctcaaggtctcaggttcgattctctccggtg 14186732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 17619578 - 17619512
Alignment:
Q  88 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||| ||||| ||||| || |||||| ||| || | |||||||||||||||||||||||||||||    
T  17619578 agtacaccttgtacttaaaagacgtctcggttgttattaatatattccattttagtttcttaaaaaa 17619512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 19716228 - 19716302
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||  || ||||| |||||||| ||||||| |||||||||||| ||||||  |||||| |||||||||||    
T  19716228 ttgggaccatggagtgtgctcctcctcaaggtctctggttcgattctccccggtgacaatttgggtgggctaatt 19716302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 21960582 - 21960631
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||||||||| | ||||| |||||||||||||||||| ||||||||||||    
T  21960582 ttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 27259192 - 27259241
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||||||||||| ||||| ||||||||||||| ||||||| |||||||||    
T  27259192 ttgggacctgggagtgtgctcctcctcgaggtttcaggtttgattctctc 27259241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 15048106 - 15048042
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||| |||||  |||| |||||||| ||||||||||||||||| |||| ||||| ||||||||    
T  15048106 ttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctggtgccaatttgag 15048042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 30232375 - 30232435
Alignment:
Q  174 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| ||||||||  |||||||||||| |||||||||||||| ||||||  ||||||||||    
T  30232375 tgtgctcctcctcatggtctcaggttccattctctccggtgccaatttggttgggctaatt 30232435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 37788510 - 37788446
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| |||| || ||||| |||||||| ||||||||||||||||||||||  |||| ||||||||    
T  37788510 ttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgag 37788446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 230
Target Start/End: Complemental strand, 8796119 - 8796068
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 230  Q
    |||||||| |||||||| ||||||||||||| | |||||||||||| |||||    
T  8796119 tcctcctcaaggtctcaagttcgattctctctgatgctaatttgagcgggct 8796068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 27093398 - 27093343
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 223  Q
    |||| ||||| |||||||| |||||||||||| ||||||||| ||||| |||||||    
T  27093398 tgggagtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttga 27093343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 47810781 - 47810718
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||| ||||| |||||| | ||||||| |||| ||||||||||||||| |||||| ||||||||    
T  47810781 tgggagtgtgctcctccgcaaggtctcgggtttgattctctccggtgccaatttgggtgggcta 47810718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 8075172 - 8075098
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| |||||||| |||| ||||||||||||| |||  |||  |||||| |||||||||||    
T  8075172 ttgggacttgggagtgtgctcctcctcaaggtttcaggttcgattccctctagtgtcaatttgggtgggctaatt 8075098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 25035736 - 25035810
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||| |  |||| ||||||||||| | ||||||||||||||| ||||||  |||||| ||||| |||||    
T  25035736 ttgggacctgagaatgtgctcctcctcgagatttcaggttcgattctcaccggtgtcaatttgggtgggttaatt 25035810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 28531103 - 28531029
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| || || ||||||||||||||| ||| || |||||||| ||||  |||||| |||||||||||    
T  28531103 ttgggatctgggagtatgctcctcctcgaggtcttaggctcaattctctctggtgtcaatttgggtgggctaatt 28531029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 30510244 - 30510170
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||| || || || |||| ||||||||||||||||||||||||||  |||  ||| | ||||||||||||    
T  30510244 ttgggacctaggagtatgctccttctcgaggtctcaggttcgattctctctagtgtcaatctaagtgggctaatt 30510170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 31608562 - 31608508
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||| ||||| |||||||||||||||||| || ||||||||| || ||||||||    
T  31608562 ctgggagtgtgctcctcctcgaggtctcagatttgattctctctggggctaattt 31608508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 33899653 - 33899719
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| ||||| |||||||| |||||||||||||||||||||  ||||  |||||| ||| |||||||    
T  33899653 tgggagtgtgctcctcctctaggtctcaggttcgattctctttggtgtcaatttgggtgtgctaatt 33899719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 231
Target Start/End: Original strand, 44069802 - 44069860
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||| |||||||| |||||||||||| |||||| |||||||| |||||  ||||||||    
T  44069802 gtgtgctcctcctcaaggtctcaggtttgattctttccggtgccaatttaggtgggcta 44069860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 47454649 - 47454615
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    ||||| |||||||||||||||||||||||||||||    
T  47454649 gtgtgctcctcctcgaggtctcaggttcgattctc 47454615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 52770026 - 52769980
Alignment:
Q  162 gggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctct 208  Q
    |||| ||||| ||||| ||||||| ||||||||||||||||||||||    
T  52770026 gggatctgggagtgtgctcctccttgaggtctcaggttcgattctct 52769980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 2667893 - 2667942
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||||| ||||| ||||| || ||||||||||||||||||||||| ||||    
T  2667893 ttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctc 2667942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 3427591 - 3427534
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||| ||||| |||||||| ||||||||| ||||||||||||  |||| ||||||||    
T  3427591 ctgggagtgtgctcctcctcaaggtctcagattcgattctctctagtgccaatttgag 3427534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 8051245 - 8051306
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    |||||||||||  || || | ||||||||||||||| ||||||||| ||||||||| |||||    
T  8051245 ttgggacctggcagtatgcttctcctcgaggtctcaagttcgattccctccggtgccaattt 8051306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Original strand, 11612330 - 11612391
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    |||||| ||||| ||||| |||||||  |||||||||||||||| ||| ||||||| |||||    
T  11612330 ttgggagctgggagtgtgctcctccttaaggtctcaggttcgatgctccccggtgccaattt 11612391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 32651483 - 32651434
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||||||||||| ||||| |||||||| || |||||| ||||||||||||    
T  32651483 ttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctc 32651434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 34062574 - 34062529
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||| ||||||||||||| |||||||| ||||| ||||||||    
T  34062574 tcctcctcaaggtctcaggttcaattctctctggtgccaatttgag 34062529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 36720420 - 36720461
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||| ||||| ||||||||||||| |||||||||||||||||    
T  36720420 tgggagtgtgctcctcctcgaggtttcaggttcgattctctc 36720461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 37045825 - 37045906
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    ||||||| ||||||||||||  ||| |||| |||||| |||||| || |||| |||||||  |||||||  |||||||||||    
T  37045825 ttgagcgacctctttagtacgccttatgctaaagaggtgtctctcttattgtgaatatatatcattttaccttcttaaaaaa 37045906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 39253728 - 39253777
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||||| ||||| ||||| ||||| || ||||||||||||||||||||||    
T  39253728 ttgggatctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 39253777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 46576398 - 46576443
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  46576398 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 46576443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 44 - 154
Target Start/End: Original strand, 48532744 - 48532854
Alignment:
Q  44 tttgtaattacttgtcagactctttgtaattgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagt 143  Q
    |||||||||| ||| || || ||||||  | ||| | ||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  48532744 tttgtaattatttgacaaacactttgtgctcgagtgccctctttagtacaccttgtgcttaagaggcgtctctgtttttgttaatatatcccattttagt 48532843  T
Q  144 ttcttaaaaaa 154  Q
    |||||||||||    
T  48532844 ttcttaaaaaa 48532854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 51814538 - 51814599
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||||||| |||||||||||||||||||||||||||| |||||| |||||||||||    
T  51814538 gtgtgctcctcctcaaggtctcaggttcgattctctccggtgccaatttgggtgggctaatt 51814599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 16893444 - 16893499
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||||||||||||    
T  16893444 tcctcctcgaggtctcaggttcgattttctccggtgtcaatttgagtgggctaatt 16893499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 6575114 - 6575048
Alignment:
Q  88 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||||||||||||||| ||||||||| ||| || | ||||||||||||||||||||||| |||||    
T  6575114 agtacatcttgtgcttaaaaggcgtctcggttgttattaatatattccattttagtttcttcaaaaa 6575048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 12587301 - 12587374
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||| | ||||| ||||||||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  12587301 ttgggatctgtgagtgtgctcctcctcgaggtctcaggttcgattctctccggtgc-aatttaggtgggctaatt 12587374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 31383843 - 31383771
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    |||||||||||| ||||| ||||||| | ||||||||||||||||||||  ||||| |||||| |||||||||    
T  31383843 ttgggacctgggagtgtgctcctccttggggtctcaggttcgattctcttaggtgccaatttgggtgggctaa 31383771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 43445994 - 43446065
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||| ||| || ||||| |||||||| |||||||| ||||||||||| ||||||| |||||||||||||||    
T  43445994 ttgggtccttggagtgtgctcctcctcaaggtctcatgttcgattctccccggtgccaatttgagtgggcta 43446065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 2799900 - 2799957
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  2799900 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 2799957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 12370194 - 12370247
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggt 213  Q
    |||||||||||| ||||| ||||||||||||||||| ||| |||||||||||||    
T  12370194 ttgggacctgggagtgtgctcctcctcgaggtctcatgtttgattctctccggt 12370247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 40810497 - 40810562
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||||| ||||| ||||| ||||| || |||||||||||||||||||||| ||||| ||||||||    
T  40810497 tttgggatctgggagtgtgttcctcttcaaggtctcaggttcgattctctctggtgccaatttgag 40810562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 8177227 - 8177163
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||| ||||| ||||| |||||||| |||| ||||||||||||||||| ||||| ||||||||    
T  8177227 ttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgccaatttgag 8177163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 9165240 - 9165176
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||||||| ||||| |||||||| | ||||||||||| |||||||| ||||| ||||||||    
T  9165240 ttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctggtgccaatttgag 9165176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 31605893 - 31605822
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||||||| |  ||||| |||||||| |||||||| ||||||||||| ||||||| |||||| ||||||||    
T  31605893 ttgggaccttgaagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccaatttgggtgggcta 31605822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Original strand, 40257434 - 40257501
Alignment:
Q  164 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||| ||||| ||||||||||||||||| |||| ||||| |||||||  |||||| ||||||||    
T  40257434 gacctgggagtgtgctcctcctcgaggtctcaagttcaattctatccggtgtcaatttgggtgggcta 40257501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 42983412 - 42983345
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||||||||||| ||||||  ||||||||||||||| ||||| ||||| ||||| ||||||    
T  42983412 ctgggagtgtggtcctccttgaggtccgaggttcgattctctcaggtgccaatttaagtggactaatt 42983345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 1094556 - 1094630
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| ||||| | ||||| |||||| ||||||||||  |||||||||||||||||| |||||  |||||||||||    
T  1094556 ttggaacctgtgagtgtgctcctccacgaggtctcaaattcgattctctccggtgccaatttaggtgggctaatt 1094630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 6122825 - 6122899
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| |||||||| |||||||||||||||||| |||  |||  |||||| |||||||||||    
T  6122825 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattccctctagtgtcaatttgggtgggctaatt 6122899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 17745301 - 17745247
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 214  Q
    |||||||||| | ||||| ||||||||||||||||| ||||||||||||| ||||    
T  17745301 ttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctggtg 17745247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 33700811 - 33700757
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| ||||| |||||    
T  33700811 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaattt 33700757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 39966126 - 39966195
Alignment:
Q  162 gggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||||| || ||||  |||||||| |||||||||||||| ||||| |||||||||||||| ||| ||||    
T  39966126 gggaccttggagtgtactcctcctcaaggtctcaggttcgtttctccccggtgctaatttgggtgtgcta 39966195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 42949324 - 42949263
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||||||||||||||||  || ||||||||||||||  ||||| ||||||||||||    
T  42949324 gtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatt 42949263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 3265963 - 3266019
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||| |||||||| |||||||||||||||||||||| ||| | ||||||||    
T  3265963 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggttccaatttgag 3266019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 15786365 - 15786317
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctct 208  Q
    |||||| ||||| ||||| |||||||| |||||||||||||||||||||    
T  15786365 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattctct 15786317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 17410261 - 17410309
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    ||||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  17410261 tttgggatctgggagtgtggtcctcctcgagatctcaagttcgattctc 17410309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 18459276 - 18459208
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtggg 228  Q
    ||||||| |||| ||||| ||||||| ||||||| || || |||||||||  |||||||||||||||||    
T  18459276 ttgggacttgggagtgtgctcctccttgaggtcttagatttgattctctcatgtgctaatttgagtggg 18459208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 23471100 - 23471056
Alignment:
Q  190 gtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||    
T  23471100 gtctcaggttcgattctctccggtgtcaatttgagttggctaatt 23471056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 36371501 - 36371565
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||| ||||| |||||||| |||||| ||||||||||||||| | ||| ||||||||    
T  36371501 ttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctgatgccaatttgag 36371565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 45266884 - 45266936
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||  |||||||    
T  45266884 tcctcctcaaggtctcaggttcgattctccccggtgccaatttggatgggcta 45266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 8904458 - 8904509
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||| |||||||| |||||||| ||||||||||||| ||||| ||||||||    
T  8904458 gtgtgctcctcctcaaggtctcaagttcgattctctctggtgccaatttgag 8904509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 16170023 - 16169976
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    |||||||||||| ||||| |||||||| |||| |||||||||||||||    
T  16170023 ttgggacctgggagtgtgttcctcctcaaggtttcaggttcgattctc 16169976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 17297015 - 17297090
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc-ggtgctaatttgagtgggctaatt 234  Q
    ||||||||| || ||||| |||||||| |||||||| ||| ||||||| || ||||| |||||| |||||||||||    
T  17297015 ttgggaccttggagtgtgctcctcctcaaggtctcatgtttgattctcccccggtgccaatttgggtgggctaatt 17297090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 18037659 - 18037584
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| |||| ||||| ||||  ||||| ||||| |||||||||||||||||||  ||||  |||||||||||    
T  18037659 tttgggacttgggagtgtgctccttttcgagatctcaagttcgattctctccggtgccgatttaggtgggctaatt 18037584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 19088259 - 19088314
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| |||| | ||||||||||| ||| |||| |||||||||||||||||||    
T  19088259 tcctcctcaaggttttaggttcgattcactctggtgttaatttgagtgggctaatt 19088314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 21547525 - 21547454
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||||| |||| | ||| ||||||||||||| ||||||||||||||||| | ||| |||||  ||||||||    
T  21547525 ttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctgatgccaatttaggtgggcta 21547454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 34228905 - 34228975
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||||||| || ||||| ||||| || |||||||||||| ||||||||||||||| |||||  ||||||||    
T  34228905 ttgggacctcggagtgtgttcctc-tcaaggtctcaggttggattctctccggtgccaattttggtgggcta 34228975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 1247149 - 1247207
Alignment:
Q  165 acctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 223  Q
    ||||||| ||||  |||||||| |||||||||||||||||||||| ||| | |||||||    
T  1247149 acctgggagtgtactcctcctcaaggtctcaggttcgattctctctggtaccaatttga 1247207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 4280468 - 4280422
Alignment:
Q  188 aggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| |||||||| ||||||||||||| ||| |||||||    
T  4280468 aggtctcaggtttgattctcttcggtgctaatttgggtgagctaatt 4280422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 9117150 - 9117212
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 222  Q
    |||||| ||||  ||||| ||||||| |||||||||||||||||||| ||| || ||||||||    
T  9117150 ttgggatctggaagtgtgctcctccttgaggtctcaggttcgattctttccagtactaatttg 9117212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 10526854 - 10526928
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| || || |||||||| ||||||||| |||||||||||| || |  |||||| ||||| |||||    
T  10526854 ttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctggagtcaatttgggtgggttaatt 10526928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 19940917 - 19940847
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 230  Q
    ||||| ||| || ||||| |||||||  |||||||||||| ||||||||||||||| |||||  |||||||    
T  19940917 ttgggtccttggagtgtgctcctccttaaggtctcaggtttgattctctccggtgccaatttatgtgggct 19940847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 50901613 - 50901686
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||  ||||| |||||||||||||||||  ||||||||||| | |||| |||||  |||||||||||    
T  50901613 ttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctct-cagtgccaatttaggtgggctaatt 50901686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 210
Target Start/End: Original strand, 2220024 - 2220053
Alignment:
Q  181 ctcctcgaggtctcaggttcgattctctcc 210  Q
    ||||||||||||||||||||||||||||||    
T  2220024 ctcctcgaggtctcaggttcgattctctcc 2220053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 4566579 - 4566628
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||| ||||||| ||||| ||||||||  |||||||||||||||||||||    
T  4566579 ttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctc 4566628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 7766874 - 7766829
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||| ||| |||||||||||  |||||||||    
T  7766874 gaggtctcaggttcgattccctctggtgctaatttcggtgggctaa 7766829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 8077697 - 8077742
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  8077697 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 8077742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 9500502 - 9500457
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  9500502 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 9500457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 15059549 - 15059504
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  15059549 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 15059504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 18646903 - 18646948
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  18646903 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 18646948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 21392881 - 21392942
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||||||| |||||||||||||||| |||  | |||| | ||||||||||||||||    
T  21392881 gtgtgctcctcctcaaggtctcaggttcgatcctcctctgtgccagtttgagtgggctaatt 21392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 221
Target Start/End: Original strand, 29753700 - 29753741
Alignment:
Q  180 cctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||||| |||||||||||||||||||||| ||||| |||||    
T  29753700 cctcctcaaggtctcaggttcgattctctctggtgccaattt 29753741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 42858653 - 42858608
Alignment:
Q  189 ggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||||||||||| ||||  ||||||| ||||||||||    
T  42858653 ggtctcaggttcgattctctctggtgtcaatttgaatgggctaatt 42858608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 44126427 - 44126500
Alignment:
Q  161 tgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||| ||||| |||||| ||||||||||| || |||||||||  |||| |||||  || ||||||||    
T  44126427 tgggacctgggagtgtgctcctccacgaggtctcagatttgattctctctagtgccaatttaggtaggctaatt 44126500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 44961809 - 44961870
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||||||  |||||||||||||||||||||  |||  |||||| |||||||||||    
T  44961809 gtgtgctcctcctcagggtctcaggttcgattctctctagtgtcaatttgggtgggctaatt 44961870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 51281395 - 51281444
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 222  Q
    ||||| |||||||| |||||||||||| |||||||||||| || ||||||    
T  51281395 gtgtgctcctcctcaaggtctcaggtttgattctctccggcgccaatttg 51281444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Original strand, 3799951 - 3800011
Alignment:
Q  174 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| |||||||||| || |||||||||||||||||  |||| |||||  |||||||||||    
T  3799951 tgtgctcctcctcgaagtttcaggttcgattctctctagtgccaatttaggtgggctaatt 3800011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 234
Target Start/End: Complemental strand, 10150916 - 10150840
Alignment:
Q  158 atttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||| |||| ||||  |||||||| | ||||||||||| |||||||| ||||  | ||||||||| ||||||    
T  10150916 atttgggacttgggagtgtactcctcctcaaagtctcaggttcaattctctcaggtgtcagtttgagtggactaatt 10150840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 19528359 - 19528319
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggt 213  Q
    ||||| |||||||| |||||||||||||||||||| |||||    
T  19528359 gtgtgctcctcctcaaggtctcaggttcgattctccccggt 19528319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 26232393 - 26232349
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgcta 217  Q
    ||||| ||||||| |||||||||||||| ||||||||| ||||||    
T  26232393 gtgtgctcctccttgaggtctcaggttcaattctctccagtgcta 26232349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 155
Target Start/End: Original strand, 28597647 - 28597728
Alignment:
Q  74 tgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaac 155  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||||||||||||||| |||||| ||||||    
T  28597647 tgagcgtcctctttagtacactttgtgcttaagaggcgtctctgttattgtttatatattccattttaatttcttcaaaaac 28597728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 968393 - 968467
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||  |||||||||||    
T  968393 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctccgatgccaatttaggtgggctaatt 968467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 23554431 - 23554293
Alignment:
Q  17 tgtttgggtattggttgatgctagtattttgtaattacttgtcagactctttgtaa-ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctc 115  Q
    |||||||||||| | ||| ||| || ||||||||||| || ||||||   |||||  || | |||||||||||||||| || ||||||||||||||||||    
T  23554431 tgtttgggtattagctgacgctcgttttttgtaattatttatcagacatcttgtatctttaccgtcctctttagtacacctcgtgcttaagaggcgtctc 23554332  T
Q  116 tgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
      ||||| | ||| ||||||||||||||||| |||||||    
T  23554331 catttttattaatgtattccattttagtttcctaaaaaa 23554293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 29431042 - 29431116
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| ||||||| |||| |||||||||||||||||  ||||||||||||||||||||||||    
T  29431042 ttgggacttgggagtgtgctcctccttgaggcctcaggttcgattctctttggtgctaatttgagtgggctaatt 29431116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 35690109 - 35690030
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaattgatga 239  Q
    |||||| |||||||| || |||||||| |||||||||||||||||||||| ||||  ||||| ||| |||||||||||||    
T  35690109 ttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaagtaggctaattgatga 35690030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 2203523 - 2203597
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| |||||||| |||||||||| || |||||| ||||||| |||||| |||||||||||    
T  2203523 ttgggacctgggagtgtgctcctcctcaaggtctcagggtcaattctccccggtgccaatttgggtgggctaatt 2203597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 16852371 - 16852418
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  16852371 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 16852418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 11852150 - 11852216
Alignment:
Q  88 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||| ||||||||||| ||||||||| ||| || | ||||||||||||| |||||||||||||||    
T  11852150 agtacaccttgtgcttaaaaggcgtctcggttgttattaatatattccattatagtttcttaaaaaa 11852216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 18540329 - 18540403
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||  | |||||| |||||||||||||||||||||| ||||| |||||||| ||| |||||    
T  18540329 ttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctggtgccaatttgagagggttaatt 18540403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 28783095 - 28783165
Alignment:
Q  164 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| ||||| |||||||| |||||||| |||||||||||  |||||| |||||| |||||||||||    
T  28783095 gacctgggagtgtgctcctcctcaaggtctcatgttcgattctcctcggtgccaatttgggtgggctaatt 28783165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 29858094 - 29858020
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||| |  |||||| |||||  |||||||||||    
T  29858094 ttgggaccagggagtgtgctcctcctcgaggtctcaggttcgattcccctcggtgccaatttaggtgggctaatt 29858020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 3624611 - 3624663
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 212  Q
    |||||||||||| ||||| ||||| || |||||||||||||||||||||||||    
T  3624611 ttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctccgg 3624663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 33017245 - 33017309
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||  ||||| |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  33017245 ttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 33017309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 30774782 - 30774707
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| ||||  ||||| |||||||||||||||||| ||||||| |||||| ||| ||||| |||| |||||||    
T  30774782 tttgggatctggaagtgtgttcctcctcgaggtctcagattcgattttctccgatgccaatttaagtgagctaatt 30774707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 6536551 - 6536625
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||| || ||||| |||||||| ||||||||||||| |||||||| ||||| |||||  ||||| |||||    
T  6536551 ttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgccaatttaggtgggttaatt 6536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 7140740 - 7140813
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||||||||| ||||||||||| |||||| ||||||||||| ||||   |||||| |||||||||||    
T  7140740 ttgggatctgggtgtgtgctcctcctcgagctctcagattcgattctct-cggtatcaatttgggtgggctaatt 7140813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 8485030 - 8485104
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||| | ||||| ||||| | |||||||||  |||||||||||||||||| |||||  |||||||||||    
T  8485030 ttgggacctgtgagtgtgctcctctttgaggtctcattttcgattctctccggtgccaatttaggtgggctaatt 8485104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 11819807 - 11819881
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| |||||||| |||||||||||||||||| |||  |||  |||||| |||||||||||    
T  11819807 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattcactctagtgtcaatttgggtgggctaatt 11819881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 11492111 - 11492044
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||| |||| |||||||||| |||||||||||||| | |||  |||||| |||||||||||    
T  11492111 ctgggagtgtgctccttctcgaggtcttaggttcgattctcttcagtgtcaatttgggtgggctaatt 11492044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 222
Target Start/End: Original strand, 13129698 - 13129761
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 222  Q
    |||||||| |||| ||| | |||||||| |||| ||||||||||||||||| ||||| ||||||    
T  13129698 tttgggacttgggagtgcgctcctcctcaaggtttcaggttcgattctctctggtgccaatttg 13129761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 19703532 - 19703485
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    |||||||||| | ||||| |||||||| ||||||||||||||||||||    
T  19703532 ttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctc 19703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 22193409 - 22193358
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccg 211  Q
    ||||| |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  22193409 ttggggcctgggagtgtgctcctcctcaaggtcttaggttcgattctctccg 22193358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 18546409 - 18546355
Alignment:
Q  158 atttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 212  Q
    |||||||||||| | |  || ||||||||||||||||||||||||||||| ||||    
T  18546409 atttgggacctgagagcatgctcctcctcgaggtctcaggttcgattctcaccgg 18546355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 234
Target Start/End: Complemental strand, 23361686 - 23361620
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| ||||| |||||||| ||||||||||||| |||||||| ||||  |||||  |||||||||||    
T  23361686 tgggagtgtgctcctcctcaaggtctcaggttcaattctctctggtgtcaatttaggtgggctaatt 23361620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Complemental strand, 31087283 - 31087249
Alignment:
Q  180 cctcctcgaggtctcaggttcgattctctccggtg 214  Q
    ||||||||||||||||||||||||| |||||||||    
T  31087283 cctcctcgaggtctcaggttcgattatctccggtg 31087249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 33694138 - 33694072
Alignment:
Q  88 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||| ||||| ||||| |||||||||  || || | ||||||||||||||||||||||| |||||    
T  33694138 agtacaccttgtacttaaaaggcgtctcgattgttattaatatattccattttagtttcttcaaaaa 33694072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 227
Target Start/End: Original strand, 35287760 - 35287814
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgg 227  Q
    ||||| |||||||| |||| ||| ||||||||||||||||||| |||||| ||||    
T  35287760 gtgtgctcctcctcaaggtatcatgttcgattctctccggtgccaatttgggtgg 35287814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 35641938 - 35641896
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 210  Q
    |||| ||||| |||||||||| |||||||||||||||||||||    
T  35641938 tgggagtgtgctcctcctcgatgtctcaggttcgattctctcc 35641896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 44780159 - 44780085
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| |||||||| |||||||||||| ||||| |||  |||  |||||| |||||||||||    
T  44780159 ttgggacttgggagtgtgctcctcctcaaggtctcaggtttgattccctctagtgtcaatttgggtgggctaatt 44780085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 11928763 - 11928730
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattct 206  Q
    ||||| ||||||||||||||||||||||||||||    
T  11928763 gtgtgctcctcctcgaggtctcaggttcgattct 11928730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Original strand, 27750761 - 27750806
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattc 205  Q
    ||||||| |||| ||||| |||||||| ||||||||||||||||||    
T  27750761 ttgggacttgggagtgtgctcctcctcaaggtctcaggttcgattc 27750806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 12988459 - 12988523
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||  ||||| |||||||| |||| ||||||||||| ||||| ||||| ||||||||    
T  12988459 ttggaacctggaagtgtgctcctcctcaaggtttcaggttcgatcctctctggtgccaatttgag 12988523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 28540466 - 28540514
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||| |||| ||| ||||||||||||| ||||||||| ||||||||||    
T  28540466 gtgtgctccttctctaggtctcaggttcaattctctcctgtgctaattt 28540514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 31843850 - 31843894
Alignment:
Q  190 gtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||||| |||| | ||||||||||||| ||||||||    
T  31843850 gtctcaggttcgattttctctgatgctaatttgagtaggctaatt 31843894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 43594349 - 43594289
Alignment:
Q  174 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| |||||||| ||||||||||||||||||||||  |||  ||||||  ||||||||||    
T  43594349 tgtgttcctcctcaaggtctcaggttcgattctctctagtgtcaatttggatgggctaatt 43594289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 26442693 - 26442825
Alignment:
Q  17 tgtttgggtattggttgatgctagtattttgtaattacttgtcagactctttgtaa-ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctc 115  Q
    ||||||||||| || ||| ||| || ||||||||||| ||| || ||   |||||| |||||||||||||||||||||  ||||||||||||||| ||||    
T  26442693 tgtttgggtatcggctgaagctcgttttttgtaattatttgacaaacatcttgtaacttgagcgtcctctttagtacacgttgtgcttaagaggcatctc 26442792  T
Q  116 tgtttttgtcaatatattccattttagtttctt 148  Q
     ||| |||| |||||||| ||||||||||||||    
T  26442793 cgttattgttaatatatttcattttagtttctt 26442825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 37274504 - 37274430
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| |||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||    
T  37274504 ttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgctaatttaagtgggctaatt 37274430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 35420220 - 35420301
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||||||||||||| |||| ||||||||||||||||| ||| ||| || | ||||||||||||||| |||||| ||||||    
T  35420220 ttgagcgtcctctttaatacaccttgtgcttaagaggcgcctcagttgttattaatatattccattttcgtttctaaaaaaa 35420301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 37109396 - 37109332
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||||||| ||||| |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  37109396 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 37109332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 23377987 - 23378058
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||||  |||| |||||||| ||||||    
T  23377987 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctagtgccaatttgagggggcta 23378058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 19238622 - 19238548
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| |||||||||||||||| |||||||||||| ||||| | |||||| |||||||||||    
T  19238622 ttgggacttgggagtgtgctcctcctcgaggtctcgggttcgattctccccggtaccaatttgggtgggctaatt 19238548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 28635727 - 28635801
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| ||||||| ||||||| ||||||||||||||| ||||| |||||| |||||||||||    
T  28635727 ttgggatctgggagtgtgctcctcctggaggtcttaggttcgattctctctggtgccaatttgggtgggctaatt 28635801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 55427245 - 55427171
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| || || |||| ||||||||||||||||||||||||  |||||| |||||| |||||||||||    
T  55427245 ttgggacctgggagtctgctcctgctcgaggtctcaggttcgattctccgcggtgccaatttgggtgggctaatt 55427171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 46295128 - 46295199
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||||| | || ||||| |||||||| |||||||||||||||||||| ||||||| |||||| ||||||||    
T  46295128 ttgggacattggagtgtgctcctcctcaaggtctcaggttcgattctccccggtgccaatttgggtgggcta 46295199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 7949499 - 7949425
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||| || ||||| |||||||| |||||||||||||||||||||| ||||  |||||  |||||||||||    
T  7949499 ttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttaggtgggctaatt 7949425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 51954145 - 51954219
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| || || ||||||||||||||||||||| |||| |||||||||  |||||| |||||||||||    
T  51954145 ttgggacttgggagtatgctcctcctcgaggtctcaggtttgattatctccggtgtcaatttgggtgggctaatt 51954219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 2622440 - 2622379
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||||||| ||||| |||||    
T  2622440 ttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctggtgccaattt 2622379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 2732044 - 2732096
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||| | |||||||||||||||||||||||||| |||||| ||||||||    
T  2732044 tcctcctcaaagtctcaggttcgattctctccggtgccaatttgggtgggcta 2732096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 37338833 - 37338750
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtca--atatattccattttagtttcttaaaaaa 154  Q
    ||||| |||||||||||||  ||||||||| | |||| |||||||||| ||| |  |||||||||||||| |||||||||||||    
T  37338833 ttgagagtcctctttagtatgtcttgtgctaaggaggtgtctctgtttgtgtaaatatatattccatttttgtttcttaaaaaa 37338750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 38869799 - 38869863
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||| ||||| ||||| |||||||| |||||||||||||||||| ||| ||||| ||||||||    
T  38869799 ttgggatctgggagtgtgctcctcctcaaggtctcaggttcgattccctctggtgccaatttgag 38869863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 32992643 - 32992710
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgg 227  Q
    ||||||||| || ||||| |||||||| |||||||| ||||||||||| ||||||  |||||||||||    
T  32992643 ttgggaccttggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgtcaatttgagtgg 32992710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 39509101 - 39509148
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    |||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  39509101 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39509148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 45658481 - 45658415
Alignment:
Q  88 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||| ||||||||||| ||| ||||| ||| || | ||||||||||||||||||||||| |||||    
T  45658481 agtacaccttgtgcttaaaaggtgtctcagttgttattaatatattccattttagtttcttcaaaaa 45658415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 46329195 - 46329257
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 222  Q
    |||||||||||| ||||| |||||||| |||| ||||||||||||||  ||||||| ||||||    
T  46329195 ttgggacctgggagtgtgctcctcctcaaggtatcaggttcgattcttcccggtgccaatttg 46329257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 51250567 - 51250493
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| ||| |||| || ||||| ||||||||| ||||||||| |||||| |||||||||||    
T  51250567 ttgggatctgggagtgtgctccgcctcaagatctcaagttcgattccctccggtgccaatttgggtgggctaatt 51250493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 30256282 - 30256201
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    ||||||| ||||||||  ||  |||||||||||| | |||||| ||| |||| ||||||| ||||||||| |||||||||||    
T  30256282 ttgagcgacctctttaacacgccttgtgcttaagtgacgtctccgttattgtgaatatataccattttagcttcttaaaaaa 30256201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 51622529 - 51622590
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||||||| ||||||||||||||| |||||| ||||| |||||| |||||| ||||    
T  51622529 gtgtgctcctcctcaaggtctcaggttcgactctctctggtgccaatttgggtgggccaatt 51622590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 2185077 - 2185013
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||| ||||| |||| ||| | |||||||||||||||||||||| ||| ||||||||    
T  2185077 ttggaacctgggagtgtgctccttctcaaagtctcaggttcgattctctccgatgccaatttgag 2185013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 7292843 - 7292779
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||| ||||| |||||||| | ||||||||||||||||||||  |||| ||||||||    
T  7292843 ttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctctagtgccaatttgag 7292779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 9517787 - 9517743
Alignment:
Q  188 aggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||||    
T  9517787 aggtctcaggttcgattctctctggtgccaatttcagtgggctaa 9517743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 19229239 - 19229183
Alignment:
Q  174 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 230  Q
    |||| ||||||||||||||||||||||||||||| | ||| | |||||| |||||||    
T  19229239 tgtgctcctcctcgaggtctcaggttcgattctccctggtaccaatttgggtgggct 19229183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 27105043 - 27104999
Alignment:
Q  190 gtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||    
T  27105043 gtctgaggttcgattctctccggtgtcaatttgagtgggctaatt 27104999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 30938265 - 30938217
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    ||||||| || || ||||| |||||||||||||||||||||||||||||    
T  30938265 tttgggatcttggagtgtgctcctcctcgaggtctcaggttcgattctc 30938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 4249221 - 4249272
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||| |||||||| |||||||||||| ||||||||| ||||| ||||||||    
T  4249221 gtgtgctcctcctcaaggtctcaggtttgattctctctggtgccaatttgag 4249272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 20770949 - 20771016
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| |||||| |||| ||| |||||||| ||||||||||||| ||||| |||||||| ||| |||||    
T  20770949 ctggatgtgtgttccttctcaaggtctcaagttcgattctctcaggtgccaatttgagggggttaatt 20771016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 32662804 - 32662859
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||||||||||||||||| ||| |||||  ||||| ||||||||||||    
T  32662804 tcctccttgaggtctcaggttcgattttcttcggtgtcaatttaagtgggctaatt 32662859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 43124670 - 43124725
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||||| |||||||||| ||| | |||  ||||||||||||||||||    
T  43124670 tcctcctcgaggtcttaggttcgattttcttcagtgtcaatttgagtgggctaatt 43124725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 210
Target Start/End: Complemental strand, 49576936 - 49576889
Alignment:
Q  163 ggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 210  Q
    |||| |||| ||||| |||||||| |||||||||||||||||||||||    
T  49576936 ggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctcc 49576889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 8030249 - 8030175
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| |||||||| |||||||| ||||||||| |||  |||  |||||| |||||||||||    
T  8030249 ttgggacttgggagtgtgctcctcctcaaggtctcaagttcgattccctctagtgtcaatttgggtgggctaatt 8030175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 13015458 - 13015512
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 214  Q
    ||||||| |||| ||||| |||||||||| |||||| ||||||||||||| ||||    
T  13015458 ttgggacttgggagtgtgctcctcctcgaagtctcatgttcgattctctcaggtg 13015512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 234
Target Start/End: Complemental strand, 22096629 - 22096579
Alignment:
Q  184 ctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||||||||| |  |||| ||||| ||||||||||||    
T  22096629 ctcgaggtctcaggttcgattctccctagtgccaatttaagtgggctaatt 22096579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 33619252 - 33619298
Alignment:
Q  175 gtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||||||||| ||||||| |||||||||||||| |||||| |||||    
T  33619252 gtggtcctccttgaggtcttaggttcgattctcttcggtgccaattt 33619298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Original strand, 8034843 - 8034884
Alignment:
Q  190 gtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    ||||||||||| ||||| |||||||| |||||||||||||||    
T  8034843 gtctcaggttcaattctttccggtgccaatttgagtgggcta 8034884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 230
Target Start/End: Original strand, 15729526 - 15729583
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 230  Q
    ||||| |||||||||| |||||| ||||||||||| ||||||  ||||||| ||||||    
T  15729526 gtgtgctcctcctcgatgtctcaagttcgattctcaccggtgtcaatttgattgggct 15729583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 19680833 - 19680772
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||||| |||| ||||| || ||||| |||||| ||||||||||||||| ||||| |||||    
T  19680833 ttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctggtgccaattt 19680772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 24124092 - 24124039
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    |||| ||||||||||||| ||||||| |||||||||| ||| |||||| |||||    
T  24124092 tgggagtgtggtcctccttgaggtctgaggttcgattatcttcggtgccaattt 24124039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 24827856 - 24827897
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcg 201  Q
    |||||||||||| ||| | |||||||||||||||||||||||    
T  24827856 ttgggacctgggagtgcgctcctcctcgaggtctcaggttcg 24827897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 34844905 - 34844860
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  34844905 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 34844860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 40058999 - 40058954
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  40058999 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 40058954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 49287908 - 49287953
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  49287908 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 49287953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 52983669 - 52983714
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  52983669 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 52983714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 1730534 - 1730470
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||||| | ||||| ||||| || | ||||||| ||| |||||||| ||||||||||||||    
T  1730534 ttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctggtgctaatttgag 1730470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 16581724 - 16581788
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||| || || |||||||| ||||||||||||| ||| |||| ||||| ||||||||    
T  16581724 ttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctggtgccaatttgag 16581788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 17618316 - 17618364
Alignment:
Q  164 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 212  Q
    |||||||| ||||| ||||||||||||||||| ||||| ||| ||||||    
T  17618316 gacctgggagtgtgctcctcctcgaggtctcatgttcgtttccctccgg 17618364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 222
Target Start/End: Complemental strand, 23284281 - 23284241
Alignment:
Q  182 tcctcgaggtctcaggttcgattctctccggtgctaatttg 222  Q
    |||||||||||||||||| |||||||||| ||| |||||||    
T  23284281 tcctcgaggtctcaggtttgattctctccagtgttaatttg 23284241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 234
Target Start/End: Complemental strand, 35644193 - 35644133
Alignment:
Q  174 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| |||||||| | ||||||||||||||||||   |||||||||||| |||| ||||||    
T  35644193 tgtgctcctcctcaacgtctcaggttcgattctccatggtgctaatttgggtggcctaatt 35644133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 46174403 - 46174367
Alignment:
Q  186 cgaggtctcaggttcgattctctccggtgctaatttg 222  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  46174403 cgaggtctcaggttcgattttctccggtgttaatttg 46174367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 207
Target Start/End: Original strand, 47044767 - 47044795
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctc 207  Q
    |||||||||||||||||||||||||||||    
T  47044767 tcctcctcgaggtctcaggttcgattctc 47044795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 6385893 - 6385967
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||  |||| |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||    
T  6385893 ttgggacctgggactgtgctcctccttaaggtctcaggttcgattctctccggtgctaatttgggtgggctaatt 6385967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 31623036 - 31622962
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| ||||||||||||||||||||| || || ||||||||  |||||| |||||||||||    
T  31623036 ttgggacctgggagtgtgctcctcctcgaggtctcaggtttgaatcactccggtgtcaatttgggtgggctaatt 31622962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 33549135 - 33549209
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| |||||  ||| |||||||    
T  33549135 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgagctaatt 33549209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 224
Target Start/End: Complemental strand, 23910166 - 23910094
Alignment:
Q  150 aaaaacccatttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||||||| |||||||||||| ||||| |||||||| ||||||||||||||| |||||  ||||| ||||||||    
T  23910166 aaaaacccacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgaatctct--ggtgccaatttgag 23910094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 154
Target Start/End: Original strand, 902845 - 902926
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    ||||||| ||||||||||||| |||||||||||| ||||||||   |||||| | | ||||||||||||  |||||||||||    
T  902845 ttgagcgccctctttagtacaccttgtgcttaaggggcgtctccacttttgttagtttattccattttaacttcttaaaaaa 902926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 210
Target Start/End: Complemental strand, 12234552 - 12234502
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 210  Q
    |||||||||||| ||||| |||  |||||||||||||||||||||||||||    
T  12234552 ttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctcc 12234502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 20213072 - 20213146
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||| |||  |||  |||||| |||||||||||    
T  20213072 ttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatt 20213146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 22107095 - 22107169
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| |||||||| | |||||||||||||||| |||  |||  |||||| |||||||||||    
T  22107095 ttgggacctgggagtgtgctcctcctcaatgtctcaggttcgattccctctagtgtcaatttgggtgggctaatt 22107169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 30127438 - 30127492
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||| ||||| ||||| |||||||||||||||||||||| |||||||| |||||    
T  30127438 ctgggagtgtgctcctcttcgaggtctcaggttcgattctttccggtgccaattt 30127492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 34444834 - 34444908
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||  | ||||| |||||| | |||||||||||||||||||| | || |||| ||||||||||||||||    
T  34444834 ttgggaccttagagtgtgctcctccccaaggtctcaggttcgattctccctggagctagtttgagtgggctaatt 34444908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 2484781 - 2484825
Alignment:
Q  190 gtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||    
T  2484781 gtctgaggttcgattctctccggtgtcaatttgagtgggctaatt 2484825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 12188348 - 12188284
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||||||| ||||| |||||||| |||| ||| |||||||||||||  |||| ||||||||    
T  12188348 ttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctctagtgccaatttgag 12188284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 16405115 - 16405163
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    ||||||||||||| ||||| | |||||||||||||||| ||||||||||    
T  16405115 tttgggacctgggagtgtgcttctcctcgaggtctcagtttcgattctc 16405163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 231
Target Start/End: Complemental strand, 24334051 - 24333999
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||| ||||||||||||| |||||| ||||||| |||||| ||||||||    
T  24334051 tcctcctcaaggtctcaggttcaattctcaccggtgccaatttgggtgggcta 24333999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 8597773 - 8597718
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| |||||||| |||| ||||||||| |||| |||||| |||||||||||    
T  8597773 tcctcctcaaggtctcaagttcaattctctccagtgccaatttgggtgggctaatt 8597718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 9626082 - 9626117
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtg 214  Q
    ||||||||||||||||| ||||||||||||||||||    
T  9626082 tcctcctcgaggtctcatgttcgattctctccggtg 9626117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 3172813 - 3172739
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| || || ||||| |||||||||||| ||||||| |||   ||| ||||||| |||||||||||    
T  3172813 ttgggacctgggagtatgctcctcatcgaggtctcagattcgattttctttagtgttaatttgggtgggctaatt 3172739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 14557993 - 14558066
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||  ||||| ||||||||  ||||||||||||||||||| ||||||  |||||| |||| ||||||    
T  14557993 ttgggacctggaagtgtgctcctcctccgggtctcaggttcgattctc-ccggtgtcaatttgggtggtctaatt 14558066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 19162814 - 19162864
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctcc 210  Q
    |||||||  ||| ||||| ||||||||||| ||||||||||||||||||||    
T  19162814 ttgggacacgggagtgtgctcctcctcgagatctcaggttcgattctctcc 19162864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 1344985 - 1345030
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||| ||| ||||| ||||| ||||||||||    
T  1344985 gaggtctcaggttcgattccctctggtgccaatttcagtgggctaa 1345030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 188 - 221
Target Start/End: Complemental strand, 6691568 - 6691535
Alignment:
Q  188 aggtctcaggttcgattctctccggtgctaattt 221  Q
    |||||||||||||||||||||||||||| |||||    
T  6691568 aggtctcaggttcgattctctccggtgccaattt 6691535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 10338219 - 10338174
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattc 205  Q
    ||||||||| || ||||| |||||||| ||||||||||||||||||    
T  10338219 ttgggacctaggagtgtgctcctcctcaaggtctcaggttcgattc 10338174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 11448921 - 11448966
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||||||| ||||| |||||  |||||||||    
T  11448921 gaggtctcaggttcgattctctctggtgccaatttcggtgggctaa 11448966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 208
Target Start/End: Original strand, 12216774 - 12216823
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctct 208  Q
    ||||||||||| |  |||| |||| |||||||||||||||||||||||||    
T  12216774 tttgggacctgcgaatgtgctccttctcgaggtctcaggttcgattctct 12216823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 28841458 - 28841499
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtg 214  Q
    ||||| |||||||| |||||||| ||||||||||||||||||    
T  28841458 gtgtgctcctcctcaaggtctcaagttcgattctctccggtg 28841499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Complemental strand, 32250866 - 32250821
Alignment:
Q  189 ggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||||||||||||||||  ||||| |||||| |||||    
T  32250866 ggtctcaggttcgattctctccggtgacaatttaagtgggttaatt 32250821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 224
Target Start/End: Complemental strand, 11306191 - 11306155
Alignment:
Q  188 aggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  11306191 aggtctcaggttcgattctctctggtgccaatttgag 11306155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 42327440 - 42327366
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| |||||||| ||||||||||||||||||||| |||||| |||||| |||||||||||    
T  42327440 ttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctcttcggtgccaatttgggtgggctaatt 42327366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 154
Target Start/End: Complemental strand, 18488396 - 18488315
Alignment:
Q  73 ttgagcgtcctctttagtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    ||||||||||||| ||||||| ||||||||| |||||||||||  || |||| ||||||||||||||||||||||| |||||    
T  18488396 ttgagcgtcctctctagtacaccttgtgcttcagaggcgtctcaattattgttaatatattccattttagtttcttcaaaaa 18488315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 19244140 - 19244214
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||| | ||||| |||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  19244140 ttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctggtgccaatttgagtgggctaatt 19244214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 21213800 - 21213871
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  21213800 ttgggacctgggagtgtgttcctccttgaggtctcaggttcgattctccccggtgccaatttaggtgggcta 21213871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 12086174 - 12086100
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||  ||||| |||||||| ||||||| |||||||||| |||||||||||||||  |||||||||||    
T  12086174 ttgggacctggaagtgtgctcctcctcaaggtctcgggttcgattccctccggtgctaatttaggtgggctaatt 12086100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 37480106 - 37480180
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||| | ||||| |||||||| |||||||||||||||||||| ||||| | |||||| |||||||||||    
T  37480106 ttgggacctgagagtgtgctcctcctcaaggtctcaggttcgattctccccggtcccaatttgggtgggctaatt 37480180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 42602585 - 42602659
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| |||| ||| |||||| ||||| ||||||||||||||| |||||| |||||||||||    
T  42602585 ttgggacctgggagtgtgctccttctcaaggtcttaggtttgattctctccggtgccaatttgggtgggctaatt 42602659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 42860383 - 42860453
Alignment:
Q  164 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| ||||| ||||||||||||||||| ||||||||| |  |||||||| ||||||||||||||||    
T  42860383 gacctgggagtgtgctcctcctcgaggtctcaagttcgattcccgtcggtgctagtttgagtgggctaatt 42860453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 33569890 - 33569829
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| || |||||||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  33569890 gtgtgctcttcctcgaggtctcaggttcgattctctctggtgctaatttaagtggactaatt 33569829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 2311774 - 2311829
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||||||||||| ||| |||||  ||||||||||||||||||    
T  2311774 tcctcctcgaggtctcaggttcgattttcttcggtgtcaatttgagtgggctaatt 2311829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 25637181 - 25637256
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| ||||| ||||| |||| |||||||||||||||||| ||||||||| ||| |||||  |||||||||||    
T  25637181 tttgggatctgggagtgtgctccttctcgaggtctcaggttcggttctctccgatgccaatttaggtgggctaatt 25637256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 29503301 - 29503375
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||||  ||||| ||||||| ||||    
T  29503301 tttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctc-ccggtgtcaatttaagtgggcaaatt 29503375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 39715023 - 39715070
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  39715023 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctc 39715070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 23140957 - 23140896
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| ||||||||||    
T  23140957 ttgggacatgggtgtgtgttcctcctcaatgtctctggttcgattctctccagtgctaattt 23140896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 23552747 - 23552686
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||||| |||||||||| |||||||| | ||||| ||||||||||||||| ||||||||||    
T  23552747 ttgggacatgggtgtgtgttcctcctcaatgtctctggttcgattctctccagtgctaattt 23552686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 4262347 - 4262295
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccgg 212  Q
    |||||||||||  ||||| |||||||| |||||||||||||||||||||||||    
T  4262347 ttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctccgg 4262295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 27244337 - 27244413
Alignment:
Q  158 atttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||| || || ||||||||||||| | |||||||||||||| | ||| |||||| |||| |||||||    
T  27244337 atttgggacctgggagtatgctcctcctcgaggtttaaggttcgattctcttcagtgttaatttaagtgagctaatt 27244413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 227
Target Start/End: Complemental strand, 7799080 - 7799013
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgg 227  Q
    ||||||| |||| ||||| ||||||||||| |||||| ||||||||||||| |||| ||||| |||||    
T  7799080 ttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctccagtgccaatttaagtgg 7799013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 222
Target Start/End: Complemental strand, 33839306 - 33839243
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 222  Q
    |||||||| |||| ||||| |||||||| ||||||||||||| ||||| || ||||||||||||    
T  33839306 tttgggacatgggagtgtgctcctcctcaaggtctcaggttcaattctttctggtgctaatttg 33839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 19016070 - 19016136
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||| ||||| ||||||||||||||||| ||| ||||||| ||||||| ||||| ||| ||||||||    
T  19016070 tgggagtgtgctcctcctcgaggtctcaagtttgattctccccggtgccaatttaagtaggctaatt 19016136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 37756016 - 37755942
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||  |||| |||| |||||||||||| |||||| || ||| | ||| ||||||||||||||||||    
T  37756016 ttgggacctgggaatgtgctcctactcgaggtctcaagttcgactccctctgatgccaatttgagtgggctaatt 37755942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 14500315 - 14500372
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||| ||||| |||||||| ||||||||| |||||||||||| ||||| ||||||||    
T  14500315 ctgggagtgtgctcctcctctaggtctcagattcgattctctctggtgccaatttgag 14500372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 33582004 - 33582053
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||||||||| | ||||| ||||||| |||||||||||||||||||||||    
T  33582004 ttgggacctgagagtgtgctcctccttgaggtctcaggttcgattctctc 33582053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 28846722 - 28846766
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgatt 204  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||    
T  28846722 ttgggacctgggagtgtgctcctcctcgatgtctcaggttcgatt 28846766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Original strand, 37971956 - 37972000
Alignment:
Q  190 gtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||||||||||| |||||  |||||||||||    
T  37971956 gtctcaggttcgattctctccggtgccaatttaggtgggctaatt 37972000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 42922445 - 42922509
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcga-ggtctcaggttcgattctctccggtgctaatttga 223  Q
    |||| ||||||| ||||| |||||||| | ||||||||||||||||||||| ||||| |||||||    
T  42922445 ttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctggtgccaatttga 42922509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 2295962 - 2296017
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||| ||||||| ||| |||||  ||||||| ||||||||||    
T  2295962 tcctcctcgaggtctcagattcgattttcttcggtgtcaatttgaatgggctaatt 2296017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 32687511 - 32687558
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattct 206  Q
    |||||||| || | ||||| ||||||||||||||||||||||||||||    
T  32687511 tttgggacttgagagtgtgttcctcctcgaggtctcaggttcgattct 32687558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 40416435 - 40416372
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttga 223  Q
    |||| ||||||| || || |||||||  |||||||||||||||||||||| ||||| |||||||    
T  40416435 ttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctggtgccaatttga 40416372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 14780565 - 14780611
Alignment:
Q  188 aggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||| ||| ||| ||| ||||||||||||||||||    
T  14780565 aggtctcaggttcgatcctccccgatgccaatttgagtgggctaatt 14780611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 23052568 - 23052494
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| | |||||| |||||||||||||||||||| |  |||| | |||| |||||||||||    
T  23052568 ttgggacttgggagtgtgcttctcctcaaggtctcaggttcgattctccctagtgccagtttgggtgggctaatt 23052494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 26482124 - 26482197
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||| || ||||| ||||| || ||||||||||||||||||||  | |||| ||||| ||||||||||||    
T  26482124 ttgggacctaggagtgtgctcctc-tcaaggtctcaggttcgattctcctcagtgccaatttcagtgggctaatt 26482197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 29197421 - 29197347
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| ||||||| || |||||| ||||||||||  ||||||| |||||  |||||||||||    
T  29197421 ttgggacttgggagtgtgctcctccttgatgtctcatgttcgattcttcccggtgccaatttaggtgggctaatt 29197347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 41504981 - 41504907
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| || || ||||||||||  |||| | |||||||||||||||||  ||||| |||||| |||||    
T  41504981 ttgggacctgggagtatgctcctcctcgatatctccgattcgattctctccggtgtcaatttaagtgggttaatt 41504907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 360775 - 360714
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||||||| | ||||||||||| ||||||| ||||| ||||||| ||||| |||||    
T  360775 gtgtgctcctcctctacgtctcaggttcaattctcttcggtgttaatttgggtgggttaatt 360714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 224
Target Start/End: Original strand, 19322798 - 19322863
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    ||||||||||||| ||||| ||||| || ||||||| |||| |||||||||  |||| ||||||||    
T  19322798 tttgggacctgggagtgtgctcctcttcaaggtctctggtttgattctctctagtgccaatttgag 19322863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 15368 - 15294
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| |||||  |||||||||||    
T  15368 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctcggatgccaatttaggtgggctaatt 15294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 6e-18; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 16773838 - 16773912
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| | ||| |||||  |||||||||||    
T  16773838 ttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctgatgccaatttaggtgggctaatt 16773912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 14285192 - 14285256
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||| ||||| |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  14285192 ttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgccaatttgag 14285256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 30109349 - 30109280
Alignment:
Q  164 gacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| ||||| ||||||| ||||||||||||||||||| | |||||||||||||  |||||||||||    
T  30109349 gacctgggagtgtgctcctccttgaggtctcaggttcgattc-ccccggtgctaatttaggtgggctaatt 30109280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 34984837 - 34984901
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||| ||||| |||||||| |||||| ||||||||||||||| ||||| ||||||||    
T  34984837 ttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctggtgccaatttgag 34984901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 234
Target Start/End: Original strand, 38299591 - 38299638
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  38299591 gaggtctcagattcgattttctccggtgctaatttgcgtgggctaatt 38299638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 84855 - 84929
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| |||||||| |||||||| ||||||||||| ||||||| | | || |||||||||||    
T  84855 ttgggatctgggagtgtgctcctcctcaaggtctcaagttcgattctccccggtgccattatgggtgggctaatt 84929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 22020907 - 22020833
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| ||||||| || ||||||| ||||||||||||| ||| ||||||  |||||||||||    
T  22020907 ttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctccagtgttaatttaggtgggctaatt 22020833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 29075812 - 29075886
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||| ||||| ||||| ||||||||||| ||||| ||||||||||||| ||||| |||||   ||||||||||    
T  29075812 ttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctggtgccaatttagatgggctaatt 29075886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 14495850 - 14495789
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    |||||| ||||| ||||| |||||||||||||||||| || ||||||||||| ||| |||||    
T  14495850 ttgggatctgggagtgtgctcctcctcgaggtctcagatttgattctctccgatgccaattt 14495789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 27841051 - 27840990
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||||||||| |||| |||||||||||||| |||| |||||||  ||||||||||    
T  27841051 gtgtgctcctcctcgagatctccggttcgattctctctggtgttaatttggatgggctaatt 27840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 199
Target Start/End: Complemental strand, 4793134 - 4793094
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggtt 199  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  4793134 tttgggacctgggagtgtgctcctcctcgaggtctcaggtt 4793094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 25627096 - 25627152
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||| |||||||| |||||||||||||||||||||| ||||  ||||||||    
T  25627096 tgggagtgtgctcctcctcaaggtctcaggttcgattctctctggtgtcaatttgag 25627152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 30883243 - 30883171
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    |||||||||||| ||||| |||||||| |||||||| |||| |||||| || |||  |||||| |||||||||    
T  30883243 ttgggacctgggagtgtgctcctcctcaaggtctcaagttcaattctcaccagtgtcaatttgggtgggctaa 30883171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 35360110 - 35360070
Alignment:
Q  181 ctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  35360110 ctcctcgaggtctcaggttcgattctcaccggtgccaattt 35360070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 87461 - 87395
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||| |||||||| |||||||||||| ||||| |||| |||  ||||||||||||||||||    
T  87461 ctgggagtgtgctcctcctcaaggtctcaggtttgattc-ctccagtgtcaatttgagtgggctaatt 87395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 12877723 - 12877798
Alignment:
Q  159 tttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||  |||| ||||| | |||||| | |||||||||||||||||||| ||| |||||||  |||||||||||    
T  12877723 tttgggatttgggagtgtgtttctcctcaatgtctcaggttcgattctctctggtactaatttaggtgggctaatt 12877798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Original strand, 17155872 - 17155927
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||| |||||||||||| ||||||||  | ||| ||||||||||||||||||    
T  17155872 tcctcctcaaggtctcaggtttgattctctgtgctgccaatttgagtgggctaatt 17155927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 231
Target Start/End: Original strand, 21589319 - 21589390
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggcta 231  Q
    |||||||||||| || || | |||||||| |||||||||||||||| ||| ||||| |||||  ||||||||    
T  21589319 ttgggacctgggagtctgctactcctcgatgtctcaggttcgattccctctggtgccaatttaggtgggcta 21589390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 43442234 - 43442301
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||| |||||||| |||||||||||||||||||||| | ||  ||||||  ||||||||||    
T  43442234 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctctgttgtcaatttggatgggctaatt 43442301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 8278320 - 8278246
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| ||||||||||| ||||| ||| |||| ||||||||||  ||||  |||||||||||    
T  8278320 ttgggacttgggagtgtgctcctcctcgagatctcaagtttgattatctccggtgccgatttaggtgggctaatt 8278246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 15863250 - 15863316
Alignment:
Q  88 agtacatcttgtgcttaagaggcgtctctgtttttgtcaatatattccattttagtttcttaaaaaa 154  Q
    |||||| ||| ||||||| |||| |||| ||| || | |||||||||||||||||||||| ||||||    
T  15863250 agtacaccttatgcttaaaaggcatctcagttgttattaatatattccattttagtttctaaaaaaa 15863316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 18974005 - 18974059
Alignment:
Q  174 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtggg 228  Q
    |||| |||||||| |||| ||||||||||||||| | ||||| ||||||||||||    
T  18974005 tgtgctcctcctcaaggtgtcaggttcgattctccctggtgccaatttgagtggg 18974059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 234
Target Start/End: Original strand, 30000167 - 30000221
Alignment:
Q  180 cctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||||||||||||| |||||| | ||| ||||| |||||| |||||    
T  30000167 cctcctcgaggtctcaggttcgactctctctgatgccaatttaagtgggttaatt 30000221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 35705045 - 35705091
Alignment:
Q  188 aggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||||| ||||||  |||||| |||||||||||    
T  35705045 aggtctcaggttcgattctccccggtgtcaatttgggtgggctaatt 35705091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 39327135 - 39327062
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| |||| ||||| |||||||| |||||| || |||||||||||||  | |||||||| |||||||||||    
T  39327135 ttgggacatgggagtgtgctcctcctcaaggtcttagcttcgattctctccaatactaatttg-gtgggctaatt 39327062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 7918495 - 7918450
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||||| |||||| ||||||||||||||| ||||| ||||||||    
T  7918495 tcctcctcaaggtcttaggttcgattctctctggtgccaatttgag 7918450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 9842891 - 9842830
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||||| |||| ||||| |||||||||||||||| ||||| | |||||||| || ||||||    
T  9842891 ttgggacttgggagtgtgctcctcctcgaggtctcgggttcaaatctctccgatgataattt 9842830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 18207257 - 18207302
Alignment:
Q  187 gaggtctcaggttcgattctctccggtgctaatttgagtgggctaa 232  Q
    ||||||||||||||||||| ||||||||| |||||  |||||||||    
T  18207257 gaggtctcaggttcgattccctccggtgccaatttcggtgggctaa 18207302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 29173534 - 29173595
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||||||||||| |||||||||||| |||| ||||  |||||  |||||||||||    
T  29173534 gtgtgctcctcctcgaggtttcaggttcgattatctctggtgtcaatttaggtgggctaatt 29173595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 207
Target Start/End: Complemental strand, 17675787 - 17675759
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctc 207  Q
    |||||||||||||||||||||||||||||    
T  17675787 tcctcctcgaggtctcaggttcgattctc 17675759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 31074276 - 31074324
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    ||||| |||||||| || ||||||||||||||||||| ||||| |||||    
T  31074276 gtgtgttcctcctcaagatctcaggttcgattctctctggtgccaattt 31074324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 37258411 - 37258347
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||||| || || ||||| |||||||| |||| ||||||||||||||||| ||||  ||||||||    
T  37258411 ttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctggtgtcaatttgag 37258347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 222
Target Start/End: Original strand, 11559 - 11621
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttg 222  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||| |||| |||||||    
T  11559 ttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctggtgttaatttg 11621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 224
Target Start/End: Complemental strand, 20007 - 19943
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgag 224  Q
    |||| ||||||| || || |||||||| |||||||||||||||||||||| |||| |||||||||    
T  20007 ttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctggtgttaatttgag 19943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 230
Target Start/End: Complemental strand, 13084 - 13021
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggct 230  Q
    ||||| ||||| |||||||| |||||||||||||||||||||||| ||  |||||| |||||||    
T  13084 ctgggagtgtgctcctcctcaaggtctcaggttcgattctctccgatgtcaatttgggtgggct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 234
Target Start/End: Original strand, 112320 - 112387
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||||||||| | ||||||| ||||||||||||||||||||| |||||  |||| ||||||    
T  112320 ctgggagtgtggtcctctttgaggtctgaggttcgattctctccggtgccaatttaggtggactaatt 112387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Complemental strand, 14997 - 14936
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| |||||||||||||||||  || ||||||||||||||  ||||| ||||||||||||    
T  14997 gtgtgctcctcctcgaggtctcatatttgattctctccggtgacaatttaagtgggctaatt 14936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 49350 - 49411
Alignment:
Q  173 gtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||| ||||||| ||||||||||||||||||||||  ||||| |||||| |||||    
T  49350 gtgtgctcctcttcgaggtatcaggttcgattctctccggtgtcaatttaagtgggttaatt 49411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 2737 - 2693
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttga 223  Q
    |||||||| |||||||||||||||||||||| ||||| |||||||    
T  2737 tcctcctcaaggtctcaggttcgattctctctggtgccaatttga 2693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 234
Target Start/End: Complemental strand, 14987 - 14943
Alignment:
Q  190 gtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||    
T  14987 gtctcaggttcgattctctccggggctaatttgggtgggttaatt 14943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 234
Target Start/End: Complemental strand, 157025 - 156960
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||| ||||| ||||||||||||||  |||||||||| ||| |||||  ||||||||||||||||||    
T  157025 ctgggagtgtgctcctcctcgaggtc--aggttcgattttcttcggtgtcaatttgagtgggctaatt 156960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 41659 - 41604
Alignment:
Q  179 tcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    |||||||||||||||||||||| |||||||| | ||  |||||| |||||||||||    
T  41659 tcctcctcgaggtctcaggttcaattctctctgatgtcaatttgggtgggctaatt 41604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Original strand, 24084 - 24158
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgggctaatt 234  Q
    ||||||| | || ||||| ||||| |||| || |||||||||||| |||| | ||| ||||||||||||||||||    
T  24084 ttgggacttaggagtgtgctcctcttcgaagtgtcaggttcgattatctctgatgccaatttgagtgggctaatt 24158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 45804 - 45750
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtg 214  Q
    ||||||||| || ||||| ||||||| ||||||||| ||||||||||||| ||||    
T  45804 ttgggacctaggagtgtgttcctccttgaggtctcatgttcgattctctctggtg 45750  T

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Target: scaffold1367 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 209
Target Start/End: Complemental strand, 885 - 836
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctc 209  Q
    |||||| |||||  |||| |||||||||| ||||||||||||||||||||    
T  885 ttgggatctgggaatgtgctcctcctcgaagtctcaggttcgattctctc 836  T

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Target: scaffold0471 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 8679 - 8626
Alignment:
Q  168 tgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    |||| ||||||||||||| ||||||| |||||||||| ||| |||||| |||||    
T  8679 tgggagtgtggtcctccttgaggtctgaggttcgattatcttcggtgccaattt 8626  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 18344 - 18397
Alignment:
Q  174 tgtggtcctcctcgaggtctcaggttcgattctctccggtgctaatttgagtgg 227  Q
    |||| |||||||| |||| ||||||| ||||||||| ||||| |||||||||||    
T  18344 tgtgctcctcctcaaggtttcaggtttgattctctctggtgccaatttgagtgg 18397  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 221
Target Start/End: Complemental strand, 95016 - 94955
Alignment:
Q  160 ttgggacctgggtgtgtggtcctcctcgaggtctcaggttcgattctctccggtgctaattt 221  Q
    |||| ||||||| ||||| |||||||| ||||||||||||| ||| |||| ||||| |||||    
T  95016 ttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctggtgccaattt 94955  T

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Target: scaffold0291 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 2508 - 2468
Alignment:
Q  167 ctgggtgtgtggtcctcctcgaggtctcaggttcgattctc 207  Q
    ||||| ||||| |||||||| ||||||||||||||||||||    
T  2508 ctgggagtgtgctcctcctcaaggtctcaggttcgattctc 2468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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