View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19185_high_15 (Length: 314)

Name: NF19185_high_15
Description: NF19185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19185_high_15
NF19185_high_15
[»] chr4 (39 HSPs)
chr4 (164-314)||(19738698-19738852)
chr4 (163-314)||(8064072-8064227)
chr4 (163-310)||(52122836-52122987)
chr4 (163-309)||(53322337-53322487)
chr4 (160-310)||(52721262-52721415)
chr4 (159-310)||(38492236-38492381)
chr4 (163-314)||(5325684-5325839)
chr4 (163-314)||(3403548-3403693)
chr4 (163-310)||(5834830-5834981)
chr4 (163-310)||(41145612-41145764)
chr4 (163-310)||(42472536-42472687)
chr4 (227-310)||(39957632-39957715)
chr4 (169-309)||(46431901-46432045)
chr4 (163-310)||(40694070-40694221)
chr4 (163-312)||(2586336-2586489)
chr4 (173-303)||(21058843-21058979)
chr4 (163-310)||(28376996-28377147)
chr4 (163-302)||(55901114-55901257)
chr4 (235-311)||(14795078-14795154)
chr4 (225-312)||(37992497-37992585)
chr4 (228-303)||(21637734-21637809)
chr4 (163-302)||(36511908-36512052)
chr4 (225-299)||(4400534-4400608)
chr4 (248-310)||(52572278-52572339)
chr4 (163-223)||(14795023-14795083)
chr4 (163-310)||(1176981-1177128)
chr4 (250-310)||(31226044-31226104)
chr4 (234-302)||(36943744-36943812)
chr4 (235-310)||(31946193-31946268)
chr4 (160-223)||(52572207-52572270)
chr4 (160-258)||(51858829-51858931)
chr4 (163-274)||(17892248-17892363)
chr4 (236-302)||(24793706-24793772)
chr4 (171-223)||(31946263-31946315)
chr4 (158-274)||(47607105-47607224)
chr4 (248-303)||(49069269-49069324)
chr4 (227-260)||(3109253-3109286)
chr4 (277-314)||(24784357-24784394)
chr4 (163-223)||(44121900-44121960)
[»] chr7 (53 HSPs)
chr7 (158-314)||(48163400-48163560)
chr7 (163-314)||(27353918-27354073)
chr7 (163-314)||(27555332-27555487)
chr7 (163-314)||(40095647-40095802)
chr7 (157-310)||(25969388-25969546)
chr7 (163-310)||(42896999-42897139)
chr7 (157-310)||(38262990-38263147)
chr7 (163-310)||(11829686-11829837)
chr7 (163-310)||(39520797-39520937)
chr7 (163-310)||(34122584-34122735)
chr7 (163-314)||(34238155-34238310)
chr7 (174-310)||(9250387-9250529)
chr7 (168-310)||(36202755-36202891)
chr7 (154-314)||(26773675-26773839)
chr7 (155-314)||(16850775-16850938)
chr7 (158-309)||(554858-555003)
chr7 (160-300)||(1043048-1043192)
chr7 (163-300)||(27398024-27398165)
chr7 (163-312)||(44960100-44960253)
chr7 (171-307)||(26845866-26846006)
chr7 (157-310)||(47238584-47238731)
chr7 (229-300)||(47720149-47720220)
chr7 (158-302)||(21409383-21409530)
chr7 (180-303)||(23311736-23311863)
chr7 (163-247)||(4291509-4291597)
chr7 (173-303)||(8056305-8056438)
chr7 (163-302)||(33454067-33454210)
chr7 (227-300)||(8028762-8028835)
chr7 (163-312)||(35159862-35160015)
chr7 (235-311)||(36660551-36660626)
chr7 (235-303)||(49015044-49015112)
chr7 (166-258)||(23079059-23079155)
chr7 (180-303)||(18113913-18114040)
chr7 (163-298)||(19510520-19510659)
chr7 (224-310)||(26973115-26973201)
chr7 (225-310)||(23970093-23970178)
chr7 (174-306)||(11058360-11058494)
chr7 (234-310)||(16564347-16564422)
chr7 (234-310)||(16601240-16601315)
chr7 (160-223)||(16564416-16564479)
chr7 (160-223)||(16601183-16601246)
chr7 (226-303)||(1362985-1363063)
chr7 (163-270)||(38064592-38064703)
chr7 (225-302)||(24956314-24956391)
chr7 (225-310)||(40041442-40041526)
chr7 (237-303)||(7416689-7416755)
chr7 (265-310)||(1400235-1400280)
chr7 (225-310)||(44269788-44269873)
chr7 (238-303)||(31189375-31189442)
chr7 (250-309)||(19820901-19820960)
chr7 (225-258)||(1400218-1400251)
chr7 (253-310)||(4291592-4291649)
chr7 (237-310)||(21179911-21179984)
[»] chr5 (42 HSPs)
chr5 (158-314)||(39690726-39690886)
chr5 (157-310)||(32707798-32707955)
chr5 (163-310)||(30777488-30777640)
chr5 (160-314)||(33829750-33829904)
chr5 (163-310)||(9792319-9792470)
chr5 (158-300)||(12852114-12852249)
chr5 (165-310)||(26691618-26691767)
chr5 (165-310)||(26961350-26961499)
chr5 (163-312)||(26794969-26795111)
chr5 (163-310)||(1639750-1639900)
chr5 (163-309)||(32624877-32625027)
chr5 (162-311)||(30284573-30284726)
chr5 (163-310)||(26716273-26716424)
chr5 (163-310)||(26986013-26986164)
chr5 (163-314)||(41392675-41392830)
chr5 (164-310)||(17138221-17138370)
chr5 (163-300)||(30918378-30918519)
chr5 (163-310)||(1795392-1795544)
chr5 (163-267)||(10656820-10656928)
chr5 (163-310)||(32728676-32728827)
chr5 (165-286)||(11906220-11906345)
chr5 (163-310)||(6243134-6243276)
chr5 (207-310)||(18001932-18002036)
chr5 (163-310)||(3934754-3934906)
chr5 (163-302)||(5612417-5612560)
chr5 (234-300)||(7977316-7977382)
chr5 (208-310)||(43357726-43357832)
chr5 (226-302)||(34032436-34032512)
chr5 (163-292)||(21251465-21251599)
chr5 (171-269)||(22774562-22774664)
chr5 (169-302)||(5721993-5722130)
chr5 (224-312)||(7629124-7629211)
chr5 (227-300)||(5986045-5986118)
chr5 (227-300)||(9653833-9653906)
chr5 (250-302)||(27938250-27938302)
chr5 (172-302)||(14836390-14836521)
chr5 (164-309)||(42366075-42366220)
chr5 (226-271)||(1920903-1920948)
chr5 (225-258)||(17138204-17138237)
chr5 (163-257)||(35746271-35746369)
chr5 (234-294)||(22737916-22737974)
chr5 (225-257)||(41233445-41233477)
[»] chr1 (42 HSPs)
chr1 (158-314)||(28949204-28949364)
chr1 (163-314)||(6916837-6916992)
chr1 (163-314)||(38330427-38330582)
chr1 (163-314)||(52895676-52895831)
chr1 (160-310)||(20409521-20409675)
chr1 (158-314)||(37104115-37104275)
chr1 (157-314)||(38948726-38948887)
chr1 (163-300)||(8132183-8132324)
chr1 (163-310)||(1043227-1043378)
chr1 (163-314)||(3426848-3427003)
chr1 (163-314)||(36367665-36367810)
chr1 (163-310)||(1036459-1036610)
chr1 (172-310)||(28659267-28659409)
chr1 (163-300)||(37346825-37346966)
chr1 (165-310)||(30323717-30323867)
chr1 (163-310)||(25256616-25256766)
chr1 (164-304)||(5984228-5984372)
chr1 (163-300)||(43189655-43189796)
chr1 (163-310)||(9781642-9781793)
chr1 (165-300)||(32381036-32381175)
chr1 (163-300)||(2364677-2364818)
chr1 (173-310)||(29167957-29168098)
chr1 (163-310)||(13012959-13013110)
chr1 (165-310)||(41675956-41676105)
chr1 (160-303)||(40775992-40776139)
chr1 (163-300)||(31653379-31653520)
chr1 (171-312)||(14167092-14167239)
chr1 (225-310)||(24851540-24851625)
chr1 (227-312)||(48715190-48715275)
chr1 (163-300)||(10822402-10822545)
chr1 (227-312)||(38218451-38218536)
chr1 (163-302)||(3708254-3708397)
chr1 (163-258)||(2472873-2472972)
chr1 (163-312)||(24590089-24590233)
chr1 (227-299)||(14334228-14334300)
chr1 (163-295)||(34432365-34432501)
chr1 (226-310)||(9528810-9528890)
chr1 (163-310)||(34096520-34096670)
chr1 (163-211)||(24849364-24849412)
chr1 (260-303)||(8829702-8829745)
chr1 (238-303)||(5368619-5368684)
chr1 (235-303)||(41027920-41027988)
[»] chr3 (52 HSPs)
chr3 (163-314)||(37996774-37996929)
chr3 (163-314)||(40497330-40497485)
chr3 (163-310)||(55268983-55269130)
chr3 (163-310)||(7327712-7327863)
chr3 (163-310)||(22611351-22611492)
chr3 (163-314)||(28704727-28704882)
chr3 (163-300)||(42464884-42465025)
chr3 (158-310)||(1679665-1679821)
chr3 (163-312)||(10225127-10225269)
chr3 (160-300)||(48122822-48122966)
chr3 (163-310)||(35389750-35389901)
chr3 (160-300)||(53192495-53192629)
chr3 (163-310)||(28882645-28882796)
chr3 (163-314)||(52505796-52505950)
chr3 (160-309)||(6134350-6134503)
chr3 (169-314)||(2567361-2567499)
chr3 (163-311)||(52121180-52121332)
chr3 (163-310)||(13748415-13748565)
chr3 (164-310)||(28968511-28968661)
chr3 (160-309)||(1528499-1528641)
chr3 (163-310)||(22310705-22310856)
chr3 (163-310)||(52684201-52684352)
chr3 (163-310)||(41742039-41742190)
chr3 (163-304)||(22289694-22289839)
chr3 (169-314)||(25937027-25937176)
chr3 (152-303)||(3983686-3983842)
chr3 (225-310)||(19421482-19421567)
chr3 (197-310)||(25700794-25700912)
chr3 (163-310)||(19879070-19879211)
chr3 (163-302)||(21157704-21157847)
chr3 (227-300)||(45532957-45533030)
chr3 (163-310)||(47642017-47642157)
chr3 (163-300)||(42229674-42229815)
chr3 (160-303)||(5271476-5271612)
chr3 (163-303)||(30226420-30226563)
chr3 (226-310)||(7899685-7899770)
chr3 (163-257)||(29915861-29915959)
chr3 (163-257)||(29965014-29965112)
chr3 (163-312)||(30787526-30787680)
chr3 (227-302)||(45347365-45347441)
chr3 (205-300)||(33239992-33240091)
chr3 (225-274)||(983260-983309)
chr3 (163-274)||(2122704-2122822)
chr3 (225-302)||(25322447-25322524)
chr3 (163-219)||(19420905-19420961)
chr3 (174-310)||(47750856-47750997)
chr3 (202-310)||(39663997-39664107)
chr3 (225-258)||(13353145-13353178)
chr3 (172-310)||(20510123-20510265)
chr3 (225-258)||(47642141-47642174)
chr3 (171-223)||(13353244-13353296)
chr3 (226-274)||(48333147-48333195)
[»] chr2 (38 HSPs)
chr2 (163-314)||(7876714-7876869)
chr2 (163-314)||(40308860-40309015)
chr2 (157-314)||(16561794-16561955)
chr2 (163-314)||(7807337-7807492)
chr2 (163-310)||(33324818-33324969)
chr2 (163-310)||(38602289-38602440)
chr2 (158-310)||(22484262-22484418)
chr2 (157-300)||(4170479-4170626)
chr2 (163-314)||(6124173-6124328)
chr2 (163-300)||(6497626-6497767)
chr2 (163-314)||(22570937-22571093)
chr2 (163-302)||(34146180-34146323)
chr2 (159-310)||(4355321-4355476)
chr2 (169-312)||(8482882-8483029)
chr2 (163-310)||(18300972-18301123)
chr2 (163-302)||(44156597-44156741)
chr2 (163-310)||(2319275-2319426)
chr2 (158-299)||(21104477-21104622)
chr2 (157-310)||(31236153-31236310)
chr2 (160-310)||(14217117-14217275)
chr2 (152-310)||(28746623-28746781)
chr2 (161-310)||(3563849-3563991)
chr2 (163-310)||(35342317-35342469)
chr2 (160-274)||(37134301-37134419)
chr2 (163-302)||(1005513-1005655)
chr2 (163-310)||(20536775-20536916)
chr2 (163-310)||(45159276-45159416)
chr2 (197-310)||(35996677-35996793)
chr2 (163-310)||(4561788-4561940)
chr2 (161-272)||(24585528-24585642)
chr2 (172-303)||(40497363-40497495)
chr2 (158-310)||(1776403-1776559)
chr2 (160-293)||(25933562-25933699)
chr2 (163-260)||(5588107-5588208)
chr2 (225-258)||(4561924-4561957)
chr2 (163-310)||(14824148-14824290)
chr2 (225-258)||(35342453-35342486)
chr2 (234-310)||(40536307-40536384)
[»] chr8 (43 HSPs)
chr8 (157-314)||(34901345-34901506)
chr8 (163-314)||(12580516-12580671)
chr8 (163-314)||(16384617-16384772)
chr8 (163-314)||(22201300-22201455)
chr8 (163-310)||(32759373-32759524)
chr8 (163-314)||(13422208-13422363)
chr8 (158-314)||(28876528-28876689)
chr8 (157-310)||(36483429-36483586)
chr8 (158-314)||(43771667-43771827)
chr8 (163-310)||(4245940-4246091)
chr8 (163-300)||(2872888-2873028)
chr8 (157-300)||(32877431-32877578)
chr8 (163-310)||(32638833-32638974)
chr8 (163-310)||(45217187-45217338)
chr8 (163-300)||(6028487-6028628)
chr8 (163-310)||(37668582-37668733)
chr8 (163-300)||(25022125-25022266)
chr8 (170-309)||(32424928-32425071)
chr8 (163-303)||(12357889-12358023)
chr8 (163-303)||(12359017-12359151)
chr8 (161-312)||(27968101-27968258)
chr8 (161-312)||(28025087-28025244)
chr8 (165-310)||(19947964-19948112)
chr8 (163-274)||(37372259-37372374)
chr8 (163-302)||(38388667-38388810)
chr8 (169-274)||(5539441-5539539)
chr8 (163-302)||(27886190-27886333)
chr8 (163-302)||(27944848-27944991)
chr8 (168-300)||(5818288-5818424)
chr8 (158-310)||(29355618-29355775)
chr8 (225-303)||(10349310-10349388)
chr8 (163-303)||(23265649-23265788)
chr8 (225-279)||(42949196-42949250)
chr8 (163-228)||(19436274-19436339)
chr8 (163-228)||(19572423-19572488)
chr8 (253-310)||(40412508-40412565)
chr8 (227-303)||(17702563-17702639)
chr8 (237-314)||(8171202-8171278)
chr8 (225-310)||(20182439-20182524)
chr8 (226-310)||(24100160-24100244)
chr8 (165-302)||(32683-32812)
chr8 (227-272)||(30804750-30804795)
chr8 (163-220)||(40412435-40412492)
[»] chr6 (22 HSPs)
chr6 (163-314)||(1036789-1036944)
chr6 (163-310)||(8356958-8357109)
chr6 (173-314)||(31195832-31195977)
chr6 (163-300)||(3212477-3212618)
chr6 (160-310)||(7188746-7188897)
chr6 (163-310)||(32130626-32130777)
chr6 (163-310)||(19128153-19128304)
chr6 (163-310)||(26327155-26327305)
chr6 (163-274)||(27083985-27084100)
chr6 (172-310)||(32017986-32018127)
chr6 (160-309)||(234303-234459)
chr6 (160-310)||(31079609-31079753)
chr6 (163-295)||(3299141-3299277)
chr6 (163-310)||(6708008-6708159)
chr6 (163-302)||(11105286-11105429)
chr6 (163-297)||(25834476-25834614)
chr6 (163-274)||(10894586-10894690)
chr6 (158-310)||(13607752-13607908)
chr6 (163-223)||(29892966-29893026)
chr6 (160-310)||(31741135-31741277)
chr6 (225-258)||(7255056-7255089)
chr6 (225-258)||(31079737-31079770)
[»] scaffold0640 (1 HSPs)
scaffold0640 (163-310)||(8059-8210)
[»] scaffold0250 (1 HSPs)
scaffold0250 (165-310)||(5514-5663)
[»] scaffold0060 (1 HSPs)
scaffold0060 (158-314)||(30407-30567)
[»] scaffold0177 (1 HSPs)
scaffold0177 (163-300)||(25518-25648)
[»] scaffold0112 (1 HSPs)
scaffold0112 (163-310)||(42043-42183)
[»] scaffold0037 (1 HSPs)
scaffold0037 (163-299)||(27769-27899)
[»] scaffold0285 (1 HSPs)
scaffold0285 (165-298)||(13252-13388)
[»] scaffold0406 (1 HSPs)
scaffold0406 (163-310)||(13866-14003)
[»] scaffold0005 (1 HSPs)
scaffold0005 (163-311)||(44577-44708)
[»] scaffold0240 (1 HSPs)
scaffold0240 (163-291)||(10600-10732)
[»] scaffold0007 (1 HSPs)
scaffold0007 (227-303)||(181101-181177)


Alignment Details
Target: chr4 (Bit Score: 110; Significance: 2e-55; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 164 - 314
Target Start/End: Original strand, 19738698 - 19738852
Alignment:
Q  164 gaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcca 259  Q
    ||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||    
T  19738698 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcca 19738797  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  19738798 aatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 19738852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 8064227 - 8064072
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| |||||||||||||||||||||||     
T  8064227 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 8064128  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  8064127 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 8064072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 52122987 - 52122836
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| | |||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  52122987 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 52122888  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  52122887 aaatattaaattttatttttttaaaaaataattatctgatactttccgatac 52122836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 163 - 309
Target Start/End: Original strand, 53322337 - 53322487
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  |||||||| |||||||||||||| |||| | |    |||||||||||||||||||||||||||||||    
T  53322337 tgaagccccgatacttcaaaatggatgacgtatcgtatcctttgcgtatcctgcactgataccggctcgatacttcccgatacgtatccggagagtatcc 53322436  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  53322437 aaatattaaattttatttttttaaaaaataattatccgatactttccgata 53322487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 160 - 310
Target Start/End: Original strand, 52721262 - 52721415
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagta 255  Q
    |||||||||||  |||||| ||||||||||||||  ||||||| ||||||||||||||||||||     ||||||||||||||||||||| |||||||||    
T  52721262 ctctgaagccca-atacttcaaaatagatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccgatacgtattcggagagta 52721360  T
Q  256 tccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  52721361 tccaaatattaaattttatttttttataaaataattatccgatactttccgatac 52721415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 159 - 310
Target Start/End: Complemental strand, 38492381 - 38492236
Alignment:
Q  159 cctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||| ||||| |||||||| | |||||| |||||||||||||||||||| |||      |||||||||||||||||||||||||    
T  38492381 cctctgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctg------cccgatacgtatccggagagtatcc 38492288  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  38492287 aaatattaaattttatttttttaaaaaataattatccgatacatcccgatac 38492236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 5325839 - 5325684
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| ||||||||   |||||| |||||||||||||||||||| |||    ||||||||||||||||||| |||||||||||    
T  5325839 tgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 5325740  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| |||   |||||||||||||||||| ||| ||||||||||    
T  5325739 aaatattaaattttatttttaaaaaaaataattatccgatatttttcgatacatcc 5325684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 3403693 - 3403548
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    ||||||||| |||||| ||||| |||||||| |||||||| ||| ||||||||||| |||| ||      ||||||||||||||||||||||||||||||    
T  3403693 tgaagccccaatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcactgatatct------tcccgatacgtatccggagagtatccaaat 3403600  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||| ||    |||||||||||||||||||||||||||||||||    
T  3403599 attaaattttattttaaaaaaaaataattatccgatactttccgatacatcc 3403548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 5834830 - 5834981
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    || |||||||||||||||| |||||||||||    
T  5834830 tgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatgcttcccgatacgtatcgggagagtatcc 5834929  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||   ||||||||| |||||||| | |||||||    
T  5834930 aaatattaaattttattttttaagaaaataattttccgatacgtcccgatac 5834981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 41145612 - 41145764
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| | |||||| |||||||||||||| ||||| |||    |||||| ||||||||||| ||||||||||||    
T  41145612 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcatcgatacctgtccgatactttccgatacgtattcggagagtatcc 41145711  T
Q  259 aaatattaaattttatcttt-tttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||    |||||| ||||||||||||||||||||||    
T  41145712 aaatattaaattttatttttaaaaaaaaattattatccgatactttccgatac 41145764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 42472687 - 42472536
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||| |||||||||| ||||| |||||||| | |||| | ||||||||||||||||||||  ||    ||||||||| |||||||||||||||||||||    
T  42472687 tgaagtcccgatacttcaaaatggatgacgtactgtattccctgcgtatcctgcaccgatacttgcccgatacttcccaatacgtatccggagagtatcc 42472588  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||   ||||||||||||||||||| | |||||||    
T  42472587 aaatattaaattttatttttaaaaaaaataattatccgatacatcccgatac 42472536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 227 - 310
Target Start/End: Original strand, 39957632 - 39957715
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  39957632 gatacttctcgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatactttccgatac 39957715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 169 - 309
Target Start/End: Complemental strand, 46432045 - 46431901
Alignment:
Q  169 cccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatat 264  Q
    |||||||||| ||||  ||||||||  |||||||||||| ||||||||| |||||    |||||||||||||||||||||||  ||||||||||||| ||    
T  46432045 cccgatacttcaaaacggatgacgtatcgtatcctctgcatatcctgcaacgatacctgactgatacttcccgatacgtatcaagagagtatccaaagat 46431946  T
Q  265 taaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    |||||||||| ||    |||||||||||||||||||||| |||||    
T  46431945 taaattttattttaaaaaaaaataattatccgatacttttcgata 46431901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 40694070 - 40694221
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgat----acttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||| ||  |||||||  ||||||| ||||||||||| |||||    ||||||||||||||||| ||||||||||     
T  40694070 tgaagccccgatacttcaaaatggatgatgtatcgtatcccatgcgtattctgcaccgatacctgattgatacttcccgatacgtatcaggagagtatct 40694169  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| |||||  |||||||||||| ||||||| |||||||    
T  40694170 gaagattaaattttatttttttataaaataattatctgatacttcccgatac 40694221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 312
Target Start/End: Original strand, 2586336 - 2586489
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||| |||||||| ||| ||||||| |||||| | ||    ||||||| || ||||||||| | |||||||||    
T  2586336 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgagtatccttcaccgacacctgcccgatactttccaatacgtatcagaagagtatcc 2586435  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
     || |||||| ||| | ||||| |||||||||||||| |||||| |||||||||    
T  2586436 gaagattaaaatttgtttttttaaaaaataattatcctatacttcccgatacat 2586489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 303
Target Start/End: Original strand, 21058843 - 21058979
Alignment:
Q  173 atactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagtatccaaatattaaa 268  Q
    ||||||||||||  |||||||  ||||||| ||| ||||||||||||||||     |||||| ||||||||||||||| |||||||||||||| ||||||    
T  21058843 atactttaaaatgaatgacgtagcgtatccactgtgtatcctgcaccgatacatgtctgatatttcccgatacgtatctggagagtatccaaagattaaa 21058942  T
Q  269 t--tttatcttttttaaaaataattatccgatacttt 303  Q
    |  ||||| ||||||||||| ||||||||||||||||    
T  21058943 ttatttattttttttaaaaacaattatccgatacttt 21058979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 28376996 - 28377147
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  ||||||  ||| |||||||||||||||| ||    |||||||  ||||||||| | |||||||||||    
T  28376996 tgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctacccgatacttttcgatacgtaccgggagagtatcc 28377095  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||   ||||||||| ||| ||||||| ||||||    
T  28377096 aaatattaaattttattttttaagaaaataattttccaatacttttcgatac 28377147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 302
Target Start/End: Complemental strand, 55901257 - 55901114
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||||||||||||||||||||||||||  ||||||| ||| ||||||||||||||||  |    |||||||| ||||||||||| ||| | |||||    
T  55901257 tgaaaccccgatactttaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgatacatacccgatacttctcgatacgtatcaggaaaatatcc 55901158  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
     || |||||||||||| |||   ||||||||||||| |||||||    
T  55901157 gaagattaaattttatttttaaaaaaaataattatctgatactt 55901114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 14795078 - 14795154
Alignment:
Q  235 ccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgataca 311  Q
    |||||||||||||||||||||||||||||||||||||| |  |||| ||||||||||||||||||| | ||||||||    
T  14795078 ccgatacgtatccggagagtatccaaatattaaatttttttcttttaaaaaataattatccgatacatcccgataca 14795154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 312
Target Start/End: Complemental strand, 37992585 - 37992497
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttt-taaaaataattatccgatactttccgatacat 312  Q
    ||||||||| |||||||||||| | |||||||||||| |||||||||||| |||||  |||||||||||||||||| || |||||||||    
T  37992585 ctgatactttccgatacgtatcagaagagtatccaaagattaaattttatttttttaaaaaaataattatccgataattcccgatacat 37992497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 228 - 303
Target Start/End: Original strand, 21637734 - 21637809
Alignment:
Q  228 atacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||| ||||| ||||| ||||||| ||||||||    
T  21637734 atacttcccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaaacaattatctgatacttt 21637809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 302
Target Start/End: Complemental strand, 36512052 - 36511908
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| | ||||||   ||||||  |||||||||||| ||||||  ||    |||||| |||||||||||| | |||||||||    
T  36512052 tgaagccccgatacttcaaaatggttgacgtattgtatcccgtgcgtatcctgcgccgatacttgcccgatactttccgatacgtatcagaagagtatcc 36511953  T
Q  259 aaatattaaattttatcttttt-taaaaataattatccgatactt 302  Q
     || |||||||||||| |||||  |||||||||||||||||||||    
T  36511952 gaagattaaattttatttttttaaaaaaataattatccgatactt 36511908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 4400534 - 4400608
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgata 299  Q
    |||||||||||||||||||||| ||||||||||  ||||||||||||||| |||   ||||||||||||||||||    
T  4400534 ctgatacttcccgatacgtatcaggagagtatcagaatattaaattttatttttaaaaaaaataattatccgata 4400608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 52572278 - 52572339
Alignment:
Q  248 ggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  52572278 ggagagtatccaaatattaaattttat-ttttaaaaaaataattatccgatactttccgatac 52572339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 14795023 - 14795083
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata 223  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||    
T  14795023 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata 14795083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 1176981 - 1177128
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||||| ||||||  ||||||| || ||||||||||||| ||| ||    ||||||| |||||| ||||| | |||||||||    
T  1176981 tgaagccccgatacttcaaaatagttgacgtatcgtatcccctacgtatcctgcacccatacctgcccgatactttccgatatgtatcagaagagtatcc 1177080  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     ||  ||   |||||| ||||||  ||||||||||||||||||| |||||||    
T  1177081 gaaattt---ttttat-ttttttttaaataattatccgatacttcccgatac 1177128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 250 - 310
Target Start/End: Original strand, 31226044 - 31226104
Alignment:
Q  250 agagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||| || ||||||||||    
T  31226044 agagtatccaaatattaaattttattttttcaaaaaataattatccgctattttccgatac 31226104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 302
Target Start/End: Original strand, 36943744 - 36943812
Alignment:
Q  234 cccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    ||||||||||||| | ||||||||| || |||||| ||||| ||||||||||||||||||| |||||||    
T  36943744 cccgatacgtatcagaagagtatccgaagattaaaatttattttttttaaaaataattatctgatactt 36943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 310
Target Start/End: Complemental strand, 31946268 - 31946193
Alignment:
Q  235 ccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| | ||||||||| || |||||||||||| |||   ||||||||||||||||||||| |||||||    
T  31946268 ccgatacgtatcagaagagtatccgaagattaaattttatttttaaaaaaaataattatccgatacttcccgatac 31946193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 52572207 - 52572270
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata 223  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||| | ||| ||||||||||    
T  52572207 ctctgaagccccgatactttaaaatggatgacgttccgtatcccctgtgcatcatgcaccgata 52572270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 51858829 - 51858931
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcc-tgcaccgata----actgatacttcccgatacgtatccggagagt 254  Q
    |||| |||||||||||||||||||| ||||||||  ||||||  |||||||||| |||| |||||     |||||||||||||||||||||| |||||||    
T  51858829 ctctcaagccccgatactttaaaatggatgacgtatcgtatctcctgcgtatccttgca-cgatacctgtctgatacttcccgatacgtatcaggagagt 51858927  T
Q  255 atcc 258  Q
    ||||    
T  51858928 atcc 51858931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 17892248 - 17892363
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| || ||||| |||||||   |||||||| | |||||||| |||    ||||||||||||| ||||| | |||||||||    
T  17892248 tgaagctccgatacttcaaaatggacgacgtaccgtatctcatgcgtatcatacaccgatacctgcccgatacttcccgatatgtatcagaagagtatcc 17892347  T
Q  259 aaatattaaattttat 274  Q
     || ||||||||||||    
T  17892348 gaagattaaattttat 17892363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 302
Target Start/End: Complemental strand, 24793772 - 24793706
Alignment:
Q  236 cgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    ||||||||||| | ||||||||| || |||||||||||| ||||  ||||||||||||| |||||||    
T  24793772 cgatacgtatcagaagagtatccgaagattaaattttattttttaaaaaaataattatctgatactt 24793706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 31946315 - 31946263
Alignment:
Q  171 cgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata 223  Q
    |||||||||||||| ||||||||  ||||| | ||||||||||||||||||||    
T  31946315 cgatactttaaaatggatgacgtatcgtattccctgcgtatcctgcaccgata 31946263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 47607105 - 47607224
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| |||||| |  ||||||  |||||||||||||| |||||     |||||| |||| |||||||||| ||||||    
T  47607105 acctgtgaagccccgatacttcaaaatggatgacatatcgtatctcctgcgtatcctgca-cgatatctgcctgatatttcctgatacgtatcaggagag 47607203  T
Q  254 tatccaaatattaaattttat 274  Q
     |||  || ||||||||||||    
T  47607204 catctgaagattaaattttat 47607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 303
Target Start/End: Original strand, 49069269 - 49069324
Alignment:
Q  248 ggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    ||||||||| | || |||||||||||| ||||| ||||| ||||||||||||||||    
T  49069269 ggagagtattcgaagattaaattttatttttttaaaaaacaattatccgatacttt 49069324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 3109286 - 3109253
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaa 260  Q
    |||||||| |||||||||||||||||||||||||    
T  3109286 gatacttctcgatacgtatccggagagtatccaa 3109253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 24784357 - 24784394
Alignment:
Q  277 tttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||| ||||||||||||| |||||||||||||||||||    
T  24784357 ttttaaaaaataattatcagatactttccgatacatcc 24784394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 44121960 - 44121900
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata 223  Q
    ||||||||  |||||| ||||| || |||||  |||||| |||||||||||||||||||||    
T  44121960 tgaagcccacatacttcaaaatggacgacgtatcgtatcttctgcgtatcctgcaccgata 44121900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 3e-54; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 48163400 - 48163560
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| | |||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||||||||||    
T  48163400 acctgtgaagccccgatacttcaaaatgggtgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagag 48163499  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  48163500 tatccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 48163560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 27353918 - 27354073
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||| | |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  27353918 tgaagccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 27354017  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27354018 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 27354073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 27555487 - 27555332
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||| ||||| |||||||| |||||| |||||||||| ||||||||||| |||    |||||||||||||||||||||||||||||||    
T  27555487 tgaagccctgatacttcaaaatggatgacgtaccgtattctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtatcc 27555388  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  27555387 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 27555332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 40095647 - 40095802
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| |||||||||||||||||||||||     
T  40095647 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 40095746  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  40095747 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 40095802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 157 - 310
Target Start/End: Original strand, 25969388 - 25969546
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||    
T  25969388 aacctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggaga 25969487  T
Q  253 gtatccaaatattaaattttatctttttta-aaaataattatccgatactttccgatac 310  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  25969488 gtatccaaatattaaattttattttttttataaaataattatccgatactttccgatac 25969546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 42896999 - 42897139
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  42896999 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-------cttcccgatacgtatccggagagtatccaaat 42897091  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  42897092 attaaattttatttttttaaaaaataattatccgatactttccgatac 42897139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 157 - 310
Target Start/End: Original strand, 38262990 - 38263147
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||| |||||||||||||||| ||||| |||    |||||| ||||||||||||||||||    
T  38262990 aacctgtgaagccccgatacttcaaaatggatgacgtaccgtattctctgcgtatcctgcatcgatacctgcccgatactttccgatacgtatccggaga 38263089  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  38263090 gtatccaaatattaaattttatttttttaaaaaataattatctgatactttccgatac 38263147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 11829686 - 11829837
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||     |||||||||||| |||||||||||||||||||||    
T  11829686 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccaatacgtatccggagagtatcc 11829785  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  11829786 aaatattaaattttatttttaaaaaaaataattatccgatactttccgatac 11829837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 39520797 - 39520937
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||    
T  39520797 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-------cttcccgatacgtatccggagagtatccaaat 39520889  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| ||||||||||||||||||||||||| | |||||||    
T  39520890 attaaattttattttttttaaaaataattatccgatacatcccgatac 39520937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 34122735 - 34122584
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||  ||||||| ||||| |||||||| ||||||||||||||||||||||||||||| |||    ||||||||||||||||||| |||||||||||    
T  34122735 tgaagcctagatacttcaaaatggatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 34122636  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||||||||||||||||||| |||| | |||||||    
T  34122635 aaatattaaattttattttttttaaaaataattatccaatacatcccgatac 34122584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 34238155 - 34238310
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||| ||||||||||| |||    |||||| ||||||||||| ||||||||||||    
T  34238155 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtattctgcaccgatacctgcccgatactttccgatacgtattcggagagtatcc 34238254  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| |||   |||||||||||||||||||||||||||||||||    
T  34238255 aaatattaaattttatttttaaaaaaaataattatccgatactttccgatacatcc 34238310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 9250529 - 9250387
Alignment:
Q  174 tactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatattaaat 269  Q
    ||||| ||||| ||||||||  ||||||| |||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||||||||||||    
T  9250529 tacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattaaat 9250430  T
Q  270 tttatctttttta--aaaataattatccgatactttccgatac 310  Q
    ||||| |||||||  ||||||||||||||||||||||||||||    
T  9250429 tttattttttttattaaaataattatccgatactttccgatac 9250387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 168 - 310
Target Start/End: Complemental strand, 36202891 - 36202755
Alignment:
Q  168 ccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaatattaa 267  Q
    ||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||  |||      ||||||||||||||||||||||||||||||||||    
T  36202891 ccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatgcctg------cccgatacgtatccggagagtatccaaatattaa 36202798  T
Q  268 attttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||    
T  36202797 attttatttttttaaaaaataattatctgatactttccgatac 36202755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 314
Target Start/End: Complemental strand, 26773839 - 26773675
Alignment:
Q  154 gagaacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccgg 249  Q
    |||| ||| |||||||||||||||||||||| ||||||||  |||||||  ||||||||||||||||||| |||    ||||||| ||||||||||| ||    
T  26773839 gagaccctgtgaagccccgatactttaaaattgatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatacttctcgatacgtatcggg 26773740  T
Q  250 agagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||||||||||| ||||   ||||||||| || |||||||||| ||||||||    
T  26773739 agagtatccaaatattaaattttattttttaagaaaataattttctgatactttccaatacatcc 26773675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 155 - 314
Target Start/End: Original strand, 16850775 - 16850938
Alignment:
Q  155 agaacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccgga 250  Q
    ||||||| ||||||||||||| || ||||| |||||||| |||||| | ||| ||||| ||||||||||  ||    |||||| |||||||||||| | |    
T  16850775 agaacctgtgaagccccgatatttcaaaatggatgacgtaccgtattccctgtgtatcatgcaccgatacttgcccgatactttccgatacgtatctgaa 16850874  T
Q  251 gagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  16850875 gagtatccaaatattaaattttattttttaaaaaaataattatccgatactttccgatacatcc 16850938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 158 - 309
Target Start/End: Complemental strand, 555003 - 554858
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatc 257  Q
    |||| ||||||||||||||| |||||||||||||||  ||||||| ||| |||||||||||||||| ||      ||| |||||||||| |||||||||     
T  555003 acctgtgaagccccgatactctaaaatagatgacgtatcgtatcccctgtgtatcctgcaccgatacct------tcctgatacgtatcaggagagtatt 554910  T
Q  258 caaatattaaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    | || |||||||||||| ||||||||||||||||||||||||||| ||||||    
T  554909 cgaagattaaattttattttttttaaaaataattatccgatacttcccgata 554858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 300
Target Start/End: Complemental strand, 1043192 - 1043048
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagta 255  Q
    ||||||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||| |||||     ||||||||| |||||||||||| ||||||||    
T  1043192 ctctgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgcctgatactttccgatacgtatcgggagagta 1043093  T
Q  256 tccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||||||||||||| ||||   ||||||||| ||||||||    
T  1043092 tccaaatattaaattttattttttaagaaaataattttccgatac 1043048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 163 - 300
Target Start/End: Complemental strand, 27398165 - 27398024
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||||||||| |||||||| | |||||| ||||||||||||||| |||| |||    |||||| || ||| |||||||||||||||||    
T  27398165 tgaagcccggatactttaaaatggatgacgtactgtatcccctgcgtatcctgcactgatacctgctcgatactttccaatatgtatccggagagtatcc 27398066  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||| |||   |||||||||||||||||||    
T  27398065 aaatattaaattttatttttaaaaaaaataattatccgatac 27398024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 44960253 - 44960100
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| ||||||||  ||||||| ||||||||||||||| || | |||    ||||||||||||| ||||| | |||||||||    
T  44960253 tgaagctccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgacacctgtctgatacttcccgatatgtatcagaagagtatcc 44960154  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    ||| |||||||||||| |||| |||||||||||||| ||||||| |||||||||    
T  44960153 aaagattaaattttattttttgtaaaaataattatcggatacttcccgatacat 44960100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 171 - 307
Target Start/End: Complemental strand, 26846006 - 26845866
Alignment:
Q  171 cgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatatta 266  Q
    |||||||| ||||| ||||| || |||||||   ||||||||||||||||||| |||    ||||||||||||||||||  |||||||||||||||||||    
T  26846006 cgatacttcaaaatggatgatgtaccgtatctcatgcgtatcctgcaccgatacctgcccaatacttcccgatacgtatttggagagtatccaaatatta 26845907  T
Q  267 aattttatcttttttaaaaataattatccgatactttccga 307  Q
    |||||||| |||   ||||||||||||||||||||||||||    
T  26845906 aattttatttttaaaaaaaataattatccgatactttccga 26845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 157 - 310
Target Start/End: Complemental strand, 47238731 - 47238584
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtat 256  Q
    ||||| |||||||||||||||| ||||| ||||| ||  ||||||| ||||||||  |||||||||| |||      ||||||| ||||| |||||||||    
T  47238731 aacctgtgaagccccgatacttcaaaatggatgatgtatcgtatcccctgcgtatattgcaccgatacctg------cccgatatgtatctggagagtat 47238638  T
Q  257 ccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||||| ||||    
T  47238637 ccaaatattaaattttatttttttaaaaaataattatccgacactttccaatac 47238584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 47720220 - 47720149
Alignment:
Q  229 tacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  47720220 tacttcccgatacgtatccggagagtatccgaatattaaattttatttttttaaaaaataattatccgatac 47720149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 302
Target Start/End: Original strand, 21409383 - 21409530
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| ||||||||  |||||| ||||| ||||||||  ||||||  |||  |||||||||| |||| |||    |||| |||||||||||||| ||||||    
T  21409383 acctgtgaagccctcatacttaaaaatggatgacgtatcgtatctcctgtatatcctgcactgatacctgcctgatacatcccgatacgtatcaggagag 21409482  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    |||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  21409483 tatccaaagattaaattttat-ttttttaaaaataattatcggatactt 21409530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 23311736 - 23311863
Alignment:
Q  180 aaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatc 275  Q
    ||||||||||| || ||||||||  || ||||||||||||||||     |||||||||||||||| ||||| ||||||||||| || ||||||||||||     
T  23311736 aaaatagatgatgtaccgtatcccatgtgtatcctgcaccgatatatgtctgatacttcccgatatgtatcaggagagtatccgaagattaaattttatt 23311835  T
Q  276 ttttttaaaaataattatccgatacttt 303  Q
    ||||||||||| |||||||  |||||||    
T  23311836 ttttttaaaaacaattatctaatacttt 23311863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 4291509 - 4291597
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatcc 247  Q
    |||||||||||||||||||||| ||||| || |||||||| |||||||||||||||||||| ||    |||||||||||||||||||||    
T  4291509 tgaagccccgatactttaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatcc 4291597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 173 - 303
Target Start/End: Complemental strand, 8056438 - 8056305
Alignment:
Q  173 atactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaatattaaatttt 272  Q
    |||||| ||||| |||||||| ||||||||| |||||||| || ||||||  ||| ||||| |||||||||||| ||||||||||  || ||||||||||    
T  8056438 atacttcaaaatggatgacgtaccgtatcctttgcgtatcttgtaccgatgtctggtactttccgatacgtatcaggagagtatctgaagattaaatttt 8056339  T
Q  273 atcttt---tttaaaaataattatccgatacttt 303  Q
    || |||   ||| || ||||||||||||||||||    
T  8056338 attttttaatttcaagataattatccgatacttt 8056305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 33454067 - 33454210
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||||||| || ||||| ||||||||  ||||||| ||||||||||||||| ||||  ||    ||||||| ||||||||||| ||| |||||||    
T  33454067 tgaagccccgatatttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgatatatgtcagatacttctcgatacgtatcaggaaagtatcc 33454166  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
     || |||||||||||| ||||  ||||||||||| | |||||||    
T  33454167 gaagattaaattttattttttaaaaaaataattagctgatactt 33454210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 8028762 - 8028835
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| ||||  |||||||||| ||||||||    
T  8028762 gatacttcctgatacgtatcgggagagtatccaaatattaaattttatattttaaaaaaataattttccgatac 8028835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 312
Target Start/End: Original strand, 35159862 - 35160015
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| ||||| ||  ||||||| |||| ||| |||||||||||  ||    ||||||||||||||||||| |||||||||||    
T  35159862 tgaagctccgatacttcaaaatggatgatgtatcgtatcccctgcatattctgcaccgatacttgtctaatacttcccgatacgtatcaggagagtatcc 35159961  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
     || |||||||||||| ||    ||||||||||||| |||| || |||||||||    
T  35159962 gaagattaaattttattttaaaaaaaaataattatctgatagttcccgatacat 35160015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 36660551 - 36660626
Alignment:
Q  235 ccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgataca 311  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||||||||||| | ||||||||    
T  36660551 ccgatacgtatccagagagtattcaaatattaaattttat-tttttaaaaaataattatccgatacgtcccgataca 36660626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 49015112 - 49015044
Alignment:
Q  235 ccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    |||||||||||| | |||||||||||  |||||||||||| ||||||||||| ||||||||||||||||    
T  49015112 ccgatacgtatcagaagagtatccaacgattaaattttattttttttaaaaacaattatccgatacttt 49015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 258
Target Start/End: Complemental strand, 23079155 - 23079059
Alignment:
Q  166 agccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||||||| ||||| |||||| | |||||||| |||||||||||| | ||||| ||    |||||||||||||||||||| |||||||||||    
T  23079155 agccccgatacttcaaaatggatgacataccgtatcccctgcgtatcctggatcgatacctacccgatacttcccgatacgtatcaggagagtatcc 23079059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 303
Target Start/End: Complemental strand, 18114040 - 18113913
Alignment:
Q  180 aaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatattaaattttatc 275  Q
    ||||| |||||||| || ||||||||  ||||||||||||||||     ||||||||||| |||| ||||| ||||||||||  || ||||||||||||     
T  18114040 aaaatggatgacgtaccatatcctctatgtatcctgcaccgatatctgcctgatacttcctgatatgtatcaggagagtatctgaagattaaattttatt 18113941  T
Q  276 ttttttaaaaataattatccgatacttt 303  Q
    |||   |||||||| |||||||||||||    
T  18113940 tttaaaaaaaataagtatccgatacttt 18113913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 298
Target Start/End: Original strand, 19510520 - 19510659
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||||||||||| ||||| ||||||||  ||||||| ||| ||||| ||||| ||||  ||    |||||||| |||| ||||| || ||||||||    
T  19510520 tgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgtgtatcatgcactgatacatgcccgatacttcctgatatgtatcgggtgagtatcc 19510619  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgat 298  Q
    |||||||||||||||| ||||   ||||||||| ||||||    
T  19510620 aaatattaaattttattttttaagaaaataattttccgat 19510659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 310
Target Start/End: Original strand, 26973115 - 26973201
Alignment:
Q  224 actgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||  ||||||||||| | ||||||||| || |||||||||| | ||||||  ||||||||||||||||||| |||||||    
T  26973115 actgatacttttcgatacgtatcagaagagtatccgaagattaaatttttttttttttttaaataattatccgatacttcccgatac 26973201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 310
Target Start/End: Complemental strand, 23970178 - 23970093
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||| |||||||||  | ||||||||  || |||||||||||| || || ||||||||||| |||||||||||||||||    
T  23970178 ctgatacttcctgatacgtattagaagagtatctgaagattaaattttattttcttaaaaaataattacccgatactttccgatac 23970093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 306
Target Start/End: Original strand, 11058360 - 11058494
Alignment:
Q  174 tactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatattaaat 269  Q
    ||||| ||||| |||||||| |||||||| ||||||||||||||||||||     ||||||||| | |||||||||  ||||||||||  | ||||||||    
T  11058360 tacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgtctgatactttcagatacgtattgggagagtatcagattattaaat 11058459  T
Q  270 tttatcttttttaaaaataattatccgatactttccg 306  Q
    ||||  |||   |||||||| |||| |||||||||||    
T  11058460 ttta--tttaaaaaaaataagtatctgatactttccg 11058494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 310
Target Start/End: Complemental strand, 16564422 - 16564347
Alignment:
Q  234 cccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||   ||||||||| |  |||||||||||||||    
T  16564422 cccgatacgtatcgggagagtatccaaatattaaattttattttttaataaaataatt-tatgatactttccgatac 16564347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 16601240 - 16601315
Alignment:
Q  234 cccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||   ||||||||| |  |||||||||||||||    
T  16601240 cccgatacgtatcgggagagtatccaaatattaaattttattttttaataaaataatt-tatgatactttccgatac 16601315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 16564479 - 16564416
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata 223  Q
    |||||||| |||||||||| ||||| |||||||| |||||||| ||||||||||||| ||||||    
T  16564479 ctctgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgccccgata 16564416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 160 - 223
Target Start/End: Original strand, 16601183 - 16601246
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata 223  Q
    |||||||| |||||||||| ||||| |||||||| |||||||| ||||||||||||| ||||||    
T  16601183 ctctgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgccccgata 16601246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 303
Target Start/End: Complemental strand, 1363063 - 1362985
Alignment:
Q  226 tgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttt-taaaaataattatccgatacttt 303  Q
    ||||||||| ||||||||||| ||||||||||| ||||| ||||||||| |||||  ||||| |||||| |||||||||    
T  1363063 tgatacttctcgatacgtatcaggagagtatccgaatatgaaattttatttttttaaaaaaacaattatgcgatacttt 1362985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 270
Target Start/End: Original strand, 38064592 - 38064703
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactga----tacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||| |  ||||||   |||||||| ||||| |||| ||||    ||||| |||||||||||| |||||||||||    
T  38064592 tgaagccccgatactttaaaatggatgacataacgtatctcatgcgtatcatgcactgatacctgaccgatactttccgatacgtatcaggagagtatcc 38064691  T
Q  259 aaatattaaatt 270  Q
     || ||||||||    
T  38064692 gaagattaaatt 38064703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 302
Target Start/End: Original strand, 24956314 - 24956391
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    ||||||||| ||||||||||||  |||||||||| || |||||||||||| ||    |||||||||||||||||||||    
T  24956314 ctgatactttccgatacgtatcaagagagtatccgaagattaaattttattttaaagaaaaataattatccgatactt 24956391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 40041442 - 40041526
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||  |||||||||| ||||||||||| || |||||||||||| |||   |||||||||||||||||| || |||||||    
T  40041442 ctgatacttcttgatacgtatcaggagagtatccgaagattaaattttat-tttaaaaaaaataattatccgatatttcccgatac 40041526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 237 - 303
Target Start/End: Original strand, 7416689 - 7416755
Alignment:
Q  237 gatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    |||||||||| ||||||||||| || |||||||||||| || ||| |||| ||||||| ||||||||    
T  7416689 gatacgtatcaggagagtatccgaagattaaattttattttattttaaaacaattatctgatacttt 7416755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 1400280 - 1400235
Alignment:
Q  265 taaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||    
T  1400280 taaattttattttttttaaaaataattatctgatacttcccgatac 1400235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 44269788 - 44269873
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||  ||||||||||| | ||||||||  || |||||||||||  ||||  ||||||||||| ||||||||| |||||||    
T  44269788 ctgatacttttcgatacgtatcagtagagtatctgaagattaaattttaatttttaaaaaaataattaaccgatacttcccgatac 44269873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 303
Target Start/End: Original strand, 31189375 - 31189442
Alignment:
Q  238 atacgtatccggagagtatccaaatattaaattttatctt--ttttaaaaataattatccgatacttt 303  Q
    ||||||||| | |||||||||||| |||||||| ||| ||  ||||||||||||||||||| ||||||    
T  31189375 atacgtatcggaagagtatccaaagattaaattatattttatttttaaaaataattatccgctacttt 31189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 250 - 309
Target Start/End: Complemental strand, 19820960 - 19820901
Alignment:
Q  250 agagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    |||||||| ||| |||||||||||| ||    ||||||||||||||||||||||||||||    
T  19820960 agagtatctaaagattaaattttattttaaaaaaaaataattatccgatactttccgata 19820901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 1400251 - 1400218
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||||||    
T  1400251 ctgatacttcccgatacgtatcaggagagtatcc 1400218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 4291592 - 4291649
Alignment:
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||||||||| ||||   ||||||||| |||||||| | |||||||    
T  4291592 gtatccaaatattaaattttattttttaagaaaataattttccgatacgtcccgatac 4291649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 310
Target Start/End: Original strand, 21179911 - 21179984
Alignment:
Q  237 gatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||| ||||| ||||||||||| || |||||||||||| ||    || |||||||||||||||||| |||||||    
T  21179911 gatatgtatcaggagagtatccgaagattaaattttattttaaaaaataataattatccgatacttcccgatac 21179984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 108; Significance: 3e-54; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 39690886 - 39690726
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||||| |||||||||||||||||    
T  39690886 acctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagag 39690787  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  39690786 tatccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 39690726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 157 - 310
Target Start/End: Complemental strand, 32707955 - 32707798
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||    
T  32707955 aacctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggaga 32707856  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||    
T  32707855 gtatccaaatattaaattttatttttttaaaaaataattatctgatactttccgatac 32707798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 30777640 - 30777488
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  |||||||  ||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  30777640 tgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 30777541  T
Q  259 aaatattaaattttatctttttta-aaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  30777540 aaatattaaattttattttttttataaaataattatccgatactttccgatac 30777488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 160 - 314
Target Start/End: Original strand, 33829750 - 33829904
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagta 255  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||     |||||||||||||||||||||||||||||||    
T  33829750 ctctgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgcctgatacttcccgatacgtatccggagagta 33829849  T
Q  256 tccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||    ||||||  ||||||||||||||||||||| |||||||||    
T  33829850 tccaaatattaaattt----ttttttttaaataattatccgatactttctgatacatcc 33829904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 9792319 - 9792470
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||| |||||||| ||| |||||||||| ||||| |||    |||||||||||||||||||| ||||||||||    
T  9792319 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgtgtatcctgcatcgatacctgcccgatacttcccgatacgtatccagagagtatcc 9792418  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||| |||||||||||||| |||| | |||||||    
T  9792419 aaatattaaattttatttttttaaaaaataattatccaatacatcccgatac 9792470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 158 - 300
Target Start/End: Original strand, 12852114 - 12852249
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatc 257  Q
    |||| |||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||       ||||| |||||||||||||||||||||    
T  12852114 acctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgata-------cttcctgatacgtatccggagagtatc 12852206  T
Q  258 caaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||||||||||| ||||| |||||||||||||||||||    
T  12852207 caaatattaaattttatttttttaaaaaataattatccgatac 12852249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 165 - 310
Target Start/End: Original strand, 26691618 - 26691767
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaa 260  Q
    |||||||||||||| ||||||||||||||  ||||||| |||||||| |||||||||||     ||||||||||||||||||||||  |||||||||| |    
T  26691618 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccga 26691717  T
Q  261 atattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    | |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  26691718 agattaaattttattttttttaaaaataattatccgatacttcccgatac 26691767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 165 - 310
Target Start/End: Original strand, 26961350 - 26961499
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaa 260  Q
    |||||||||||||| ||||||||||||||  ||||||| |||||||| |||||||||||     ||||||||||||||||||||||  |||||||||| |    
T  26961350 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccga 26961449  T
Q  261 atattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    | |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  26961450 agattaaattttattttttttaaaaataattatccgatacttcccgatac 26961499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 26795111 - 26794969
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||| ||||||||||||| ||||||||  ||||||| ||||||||||||||||||||       ||| ||||||||||||||||||||||||||||    
T  26795111 tgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgata-------ctttccgatacgtatccggagagtatccaaat 26795019  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    |||||||||||| ||||  |||||||||||||||||||||| ||||||||    
T  26795018 attaaattttattttttaaaaaaataattatccgatacttttcgatacat 26794969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 1639900 - 1639750
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| | |||||| |||||||||||||||||||| |||    ||||||||||||||||||||| |||||||||    
T  1639900 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatcc 1639801  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||  ||||||||||||||||||| | |||||||    
T  1639800 aaatattaaattttat-ttttaaaaaaataattatccgatacgtcccgatac 1639750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 163 - 309
Target Start/End: Original strand, 32624877 - 32625027
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||||||| || ||||| |||||||| |||||||| ||| ||||| |||| ||||| |||    |||||||||||||||||| || |||||||||    
T  32624877 tgaagccccgatatttcaaaatggatgacgtaccgtatcccctgtgtatcttgcatcgatacctgcccgatacttcccgatacgtattcgaagagtatcc 32624976  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  32624977 aaatattaaattttatttttttaaaaaataattatccgatactttccgata 32625027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 162 - 311
Target Start/End: Complemental strand, 30284726 - 30284573
Alignment:
Q  162 ctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatc 257  Q
    ||||||| ||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||     |||||||||||||||||||||| ||||||||||    
T  30284726 ctgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatcaggagagtatc 30284627  T
Q  258 caaatattaaattttatcttttttaaaaataattatccgatactttccgataca 311  Q
    | || |||||||||||| ||    ||||||||||||||||||||| ||||||||    
T  30284626 cgaagattaaattttattttaaaaaaaaataattatccgatacttcccgataca 30284573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 26716273 - 26716424
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    ||||||| |||||||| ||||| ||||||||  ||||||| ||||||||||| ||||||||     |||||||||||||||||||||| | |||||||||    
T  26716273 tgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagtatcc 26716372  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  26716373 gaagattaaattttatttttttaaaaaataattatccgatacttcccgatac 26716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 26986013 - 26986164
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    ||||||| |||||||| ||||| ||||||||  ||||||| ||||||||||| ||||||||     |||||||||||||||||||||| | |||||||||    
T  26986013 tgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagtatcc 26986112  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  26986113 gaagattaaattttatttttttaaaaaataattatccgatacttcccgatac 26986164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 41392830 - 41392675
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||| || ||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||||||||| |||||||| ||||||||    
T  41392830 tgaagtccagatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatatgtatccggggagtatcc 41392731  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||    ||||||||| ||| |||||||||||||||||||    
T  41392730 aaatattaaattttattttaaaaaaaaataataatctgatactttccgatacatcc 41392675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 164 - 310
Target Start/End: Complemental strand, 17138370 - 17138221
Alignment:
Q  164 gaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagtatcca 259  Q
    ||||||||||||||| ||||||||||||||   |||||| |||||||||||||||||||||    |||||||||||||||||||||| ||||| |||||     
T  17138370 gaagccccgatacttcaaaatagatgacgtat-gtatcccctgcgtatcctgcaccgataattgcctgatacttcccgatacgtatcaggagaatatccg 17138272  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    || |||||||||||| ||||| |||| |||||||| ||||||| |||||||    
T  17138271 aagattaaattttatttttttaaaaagtaattatctgatacttcccgatac 17138221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 30918378 - 30918519
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||   |||||| |||||||||||||||||||| |||    |||||||||||||||||| |||||||||||     
T  30918378 tgaagccccgatacttcaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtattcggagagtatca 30918477  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||| ||||||  |||| |||||||||||||||||||    
T  30918478 aaatattaatttttattgttttaaaaaataattatccgatac 30918519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 1795392 - 1795544
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| | ||||||  ||||||| || ||||||||||||||||| ||    ||||||| |||||||||||| | |||||||||    
T  1795392 tgaagccccgatacttcaaaatggttgacgtatcgtatcccctccgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatcc 1795491  T
Q  259 aaatattaaatttta-tcttttttaaaaataattatccgatactttccgatac 310  Q
     || ||||||||||| | ||||||||||||||||||||||||||| |||||||    
T  1795492 gaagattaaattttatttttttttaaaaataattatccgatacttcccgatac 1795544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 267
Target Start/End: Original strand, 10656820 - 10656928
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| ||||||||  ||||||| |||||||||||||||||||| ||    |||||||| ||||||||||| |||||||||||    
T  10656820 tgaagccccgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcgggagagtatcc 10656919  T
Q  259 aaatattaa 267  Q
    |||||||||    
T  10656920 aaatattaa 10656928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 32728827 - 32728676
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| ||||| ||   |||||| ||||||||| |||| ||||| |||    |||||||||||||||||||||||||||||||    
T  32728827 tgaagctccgatacttcaaaattgatgatgtattgtatcccctgcgtatcttgcatcgatacctgcccgatacttcccgatacgtatccggagagtatcc 32728728  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||| ||||||| ||||  |||||||||||||| |||| | |||||||    
T  32728727 aaatattagattttattttttaaaaaaataattatccaatacgtcccgatac 32728676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 165 - 286
Target Start/End: Original strand, 11906220 - 11906345
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaa 260  Q
    ||||| |||||||| ||||| ||||||||   |||| | |||||||||||||||||||| |||    ||||||||||||||||||||||||||||||| |    
T  11906220 aagcctcgatacttcaaaatggatgacgtattgtattccctgcgtatcctgcaccgatatctgtccgatacttcccgatacgtatccggagagtatccga 11906319  T
Q  261 atattaaattttatcttttttaaaaa 286  Q
    |||||||||||||| ||| |||||||    
T  11906320 atattaaattttatttttcttaaaaa 11906345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 6243276 - 6243134
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||| ||||||||| ||||| ||||||||   |||||||||||||||||||||||||||       ||| |||||||||||||||||||||||| |||    
T  6243276 tgaagctccgatacttcaaaatggatgacgtattgtatcctctgcgtatcctgcaccgata-------ctttccgatacgtatccggagagtatccgaat 6243184  T
Q  263 attaaattttatcttt--tttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| |||     |||||||||||||||||| ||| ||||||    
T  6243183 attaaattttatttttaaaaaaaaaataattatccgatatttttcgatac 6243134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 207 - 310
Target Start/End: Complemental strand, 18002036 - 18001932
Alignment:
Q  207 cgtatcctgcaccgataactg-atacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttcc 305  Q
    ||||||||||| ||||| ||| |||||||||||||| |||| |||||||||   || |||||||||||| ||||||||||||||||||| ||||||||||    
T  18002036 cgtatcctgcatcgatacctgcatacttcccgatacatatcaggagagtatttgaagattaaattttattttttttaaaaataattatctgatactttcc 18001937  T
Q  306 gatac 310  Q
    |||||    
T  18001936 gatac 18001932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 3934906 - 3934754
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    ||||||| | |||||||||||| ||||||||    ||||| |||||||||| ||||||||| ||    ||||||| |||||||||||| |||||||||||    
T  3934906 tgaagcctccatactttaaaatggatgacgtattatatcccctgcgtatcccgcaccgatacctacctgatacttaccgatacgtatcaggagagtatcc 3934807  T
Q  259 aaatattaaattttatcttttttaaa-aataattatccgatactttccgatac 310  Q
     || |||||||||||| ||||  ||| ||||||||||| ||||||||||||||    
T  3934806 gaagattaaattttattttttaaaaataataattatccaatactttccgatac 3934754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 302
Target Start/End: Complemental strand, 5612560 - 5612417
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||| ||||| ||||||||  ||||| ||||| | ||||||||  ||||||||    |||||| | |||||||| | |||||||||||    
T  5612560 tgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatactttctgatacgtaccaggagagtatcc 5612461  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
     || |||||||||||| ||||| |||||||||||||||||||||    
T  5612460 gaagattaaattttatttttttaaaaaataattatccgatactt 5612417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 7977316 - 7977382
Alignment:
Q  234 cccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||| |||||||||||||||||||    
T  7977316 cccgatacgtattcggagagtatctaaatattaaattttatttttttaaaaaataattatccgatac 7977382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 43357832 - 43357726
Alignment:
Q  208 gtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    ||||||||||||||||     ||||||||| |||||||||||    ||||||||| || |||||||||||| ||||| |||||||||||||||||||||     
T  43357832 gtatcctgcaccgatacctgtctgatactttccgatacgtattaaaagagtatccgaagattaaattttatttttttaaaaaataattatccgatacttc 43357733  T
Q  304 ccgatac 310  Q
    |||||||    
T  43357732 ccgatac 43357726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 302
Target Start/End: Original strand, 34032436 - 34032512
Alignment:
Q  226 tgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    ||||||||||||||||||||| ||||||||||| || ||||| |||||| ||||  ||||||||||||| |||||||    
T  34032436 tgatacttcccgatacgtatcaggagagtatccgaagattaatttttattttttaaaaaaataattatctgatactt 34032512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 292
Target Start/End: Original strand, 21251465 - 21251599
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||| || ||||| ||||||| |||||||| |||||||  || | ||| ||||||| ||| |||    |||||| |||||||||||| |||||||||||    
T  21251465 tgaagtcctgatacattaaaatggatgacgtaccgtatctcctacttattctgcaccaatatctgtctgatactttccgatacgtatcaggagagtatcc 21251564  T
Q  259 aaatattaaattttatctttttt-aaaaataatta 292  Q
     |||||||||||| || |||||| |||||||||||    
T  21251565 gaatattaaatttaattttttttgaaaaataatta 21251599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 171 - 269
Target Start/End: Original strand, 22774562 - 22774664
Alignment:
Q  171 cgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatatta 266  Q
    |||||||||||||| | || |||  ||||||| |||| ||||||||||||||| |||    |||||| ||||||||||||  ||||||||||||||||||    
T  22774562 cgatactttaaaatggttggcgtatcgtatcccctgcatatcctgcaccgatatctgcccgatactttccgatacgtatcgagagagtatccaaatatta 22774661  T
Q  267 aat 269  Q
    |||    
T  22774662 aat 22774664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 302
Target Start/End: Original strand, 5721993 - 5722130
Alignment:
Q  169 cccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatat 264  Q
    ||||||| |||||||| ||||||||  ||||||| ||||||||||||||| ||||     | |||||||| | |||| |||| ||| ||||||| || ||    
T  5721993 cccgatattttaaaattgatgacgtatcgtatcccctgcgtatcctgcactgatacatgcccgatacttctcaatacatatcaggaaagtatccgaagat 5722092  T
Q  265 taaattttatcttttttaaaaataattatccgatactt 302  Q
    |||||||||| |||   ||||||||||||| |||||||    
T  5722093 taaattttatttttaaaaaaaataattatctgatactt 5722130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 224 - 312
Target Start/End: Original strand, 7629124 - 7629211
Alignment:
Q  224 actgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    ||||||||||||||||||||||| ||||||||||  || |||||||||||| |||   ||||| ||||||| ||||||| |||||||||    
T  7629124 actgatacttcccgatacgtatcaggagagtatctgaagattaaattttat-tttgaaaaaaaaaattatctgatacttcccgatacat 7629211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 5986118 - 5986045
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||| | |||||||||  ||||||||||||||||||||||||||| ||||  |||||||||| ||| ||||    
T  5986118 gatactttctgatacgtattgggagagtatccaaatattaaattttattttttaaaaaaataattttccaatac 5986045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 300
Target Start/End: Original strand, 9653833 - 9653906
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||||||| | |||||||   |  |||||||||||| |||||||||||||||||||| ||||    
T  9653833 gatacttcccgatacgtatcggaagagtattggatgattaaattttattttttttaaaaataattatccaatac 9653906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 250 - 302
Target Start/End: Original strand, 27938250 - 27938302
Alignment:
Q  250 agagtatccaaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    ||||||||| || |||||||||||| ||||| |||||||||||||||||||||    
T  27938250 agagtatccgaagattaaattttatttttttaaaaaataattatccgatactt 27938302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 14836390 - 14836521
Alignment:
Q  172 gatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatattaa 267  Q
    ||||||| ||||| | ||||||   |||||| |||||||||||||| |||||  ||    ||| || |||||||||||| | ||||||||| ||||||||    
T  14836390 gatacttcaaaatggttgacgtattgtatcccctgcgtatcctgcatcgatatttgtccgatattttccgatacgtatcagaagagtatccgaatattaa 14836489  T
Q  268 attttatcttttttaaaaataattatccgatactt 302  Q
     ||||   ||||||| ||||||||||| |||||||    
T  14836490 ttttt---ttttttataaataattatctgatactt 14836521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 164 - 309
Target Start/End: Complemental strand, 42366220 - 42366075
Alignment:
Q  164 gaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcca 259  Q
    ||||| || |||||| ||||||||||| || | |||||| ||||||||||||||| |||| ||    |||| ||||| |||| |||| ||||| |||||     
T  42366220 gaagctccaatacttcaaaatagatgatgtactgtatcccctgcgtatcctgcactgatacctgcccgatatttcccaatacctatcaggagaatatccg 42366121  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    || ||||| | |||| ||||    |||||||||||| |||||| ||||||    
T  42366120 aagattaattattatttttt----aaataattatccaatacttcccgata 42366075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 1920903 - 1920948
Alignment:
Q  226 tgatacttcccgatacgtatccggagagtatccaaatattaaattt 271  Q
    ||||||||||||||||||||  ||||||||||| || |||||||||    
T  1920903 tgatacttcccgatacgtattgggagagtatccgaagattaaattt 1920948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 17138237 - 17138204
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||||||    
T  17138237 ctgatacttcccgatacgtatcaggagagtatcc 17138204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 257
Target Start/End: Complemental strand, 35746369 - 35746271
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatc 257  Q
    |||||| ||||||||| ||||||||||||||   |||||  || |||||| |||| ||||| |||    |||||| |||||||||||| ||||||||||    
T  35746369 tgaagctccgatacttcaaaatagatgacgtattgtatctcctacgtatcatgcatcgatacctgcctaatactttccgatacgtatcaggagagtatc 35746271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 22737916 - 22737974
Alignment:
Q  234 cccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatc 294  Q
    ||||||||||||| |||||||||||||| ||| | | |||| |||||||||||||||||||    
T  22737916 cccgatacgtatcaggagagtatccaaagatt-attgttat-ttttttaaaaataattatc 22737974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Original strand, 41233445 - 41233477
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatc 257  Q
    |||||||||||||||||||||| ||||||||||    
T  41233445 ctgatacttcccgatacgtatcaggagagtatc 41233477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 3e-54; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 28949364 - 28949204
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||||| |||||||||||||||||    
T  28949364 acctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagag 28949265  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  28949264 tatccaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 28949204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 6916992 - 6916837
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| |||||||||||||||||||||||     
T  6916992 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 6916893  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  6916892 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 6916837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 38330427 - 38330582
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| |||||||||||||||||||||||     
T  38330427 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 38330526  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  38330527 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 38330582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 52895831 - 52895676
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| |||||||||||||||||||||||     
T  52895831 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 52895732  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  52895731 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 52895676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 20409675 - 20409521
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagta 255  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||||||||||||    
T  20409675 ctctgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 20409576  T
Q  256 tccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  20409575 tccaaatattaaattttatttttttaaaaaataattatccgatacatcccgatac 20409521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 158 - 314
Target Start/End: Original strand, 37104115 - 37104275
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||||||||| |||    |||||||| |||||||||||||||||    
T  37104115 acctatgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagag 37104214  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  37104215 tatccaaatattaaattttattttttaaaaaaataattatccgatactttccgatacatcc 37104275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 157 - 314
Target Start/End: Original strand, 38948726 - 38948887
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||| ||||||||||||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||| ||||||||||||| |||    
T  38948726 aacctgtgaagctccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccaatacttctcgatacgtatccgaaga 38948825  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
     ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  38948826 atatccaaatattaaattttatttttttaaaaaataattatacgatactttccgatacatcc 38948887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 8132183 - 8132324
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||  ||    |||||||||||||||||||||||||||||||    
T  8132183 tgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtatcctgcaccgatacatgttcgatacttcccgatacgtatccggagagtatcc 8132282  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  8132283 aaatattaaattttatttttttaaaaaataattatccgatac 8132324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 1043227 - 1043378
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||| || |||||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  1043227 tgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 1043326  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||   ||||||||||||| |||||||||||||||    
T  1043327 aaatattaaattttatttttaaaaaaaataattatctgatactttccgatac 1043378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 3426848 - 3427003
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| ||||||||   |||||| ||||||||||||||||||||  ||    |||||||| ||||||||||||||||||||||    
T  3426848 tgaagccccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtatcc 3426947  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||  |||||||||||||||||||||| ||||||||||    
T  3426948 aaatattaaattttattttttaaaaaaataattatccgatactttgcgatacatcc 3427003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 36367810 - 36367665
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    ||||| || ||||||| ||||| |||||||| | |||||| |||||||||||||||||||| |||      |||||||||||||||||||||||||||||    
T  36367810 tgaagtcctgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctg------cccgatacgtatccggagagtatccaaat 36367717  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  36367716 attaaattttatttttttaaaaaataattatccgatactttccgatacatcc 36367665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 1036459 - 1036610
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||  |||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| ||||||||||||||||||||||||    
T  1036459 tgaagccctcatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatcc 1036558  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||  ||||||||||||| |||||||||||||||    
T  1036559 aaatattaaattttattttttaaaaaaataattatctgatactttccgatac 1036610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 172 - 310
Target Start/End: Complemental strand, 28659409 - 28659267
Alignment:
Q  172 gatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatattaa 267  Q
    ||||||||||||| |||||||| | |||| | ||||||||| ||||||||||  ||    |||||| |||||||||||||||||||||||||||||||||    
T  28659409 gatactttaaaatggatgacgtacggtattccctgcgtatcatgcaccgatacatgcccgatactttccgatacgtatccggagagtatccaaatattaa 28659310  T
Q  268 attttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||| ||||| ||||||||||||||||||| |||||||||    
T  28659309 attttatttttttaaaaaataattatccgatacgttccgatac 28659267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 163 - 300
Target Start/End: Complemental strand, 37346966 - 37346825
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||| || ||||||||    
T  37346966 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggggagtatcc 37346867  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||| ||||   ||||||||| ||||||||    
T  37346866 aaatattaaattttattttttaagaaaataattttccgatac 37346825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 165 - 310
Target Start/End: Original strand, 30323717 - 30323867
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaa 260  Q
    |||||||||||||| ||||| |||||||   ||||| ||||| ||||||||||| |||| |||    ||||||||||||||||||| |||||||||||||    
T  30323717 aagccccgatacttcaaaatggatgacgcaacgtattctctgtgtatcctgcactgatatctgcccgatacttcccgatacgtatctggagagtatccaa 30323816  T
Q  261 atattaaattttatcttttt-taaaaataattatccgatactttccgatac 310  Q
    |||||||||||||| |||||  |||||||||||||||||| ||||||||||    
T  30323817 atattaaattttatttttttaaaaaaataattatccgatattttccgatac 30323867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 25256616 - 25256766
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| | |||| || ||||| |||||||| | ||||||||||||||| ||||||||||| |||    ||||||||||||||||||||||||||||| |    
T  25256616 tgaagctctgatatttcaaaatggatgacgtactgtatcctctgcgtattctgcaccgatacctgtccgatacttcccgatacgtatccggagagtattc 25256715  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||||| |||||||||||  |||| ||||||||||    
T  25256716 aaatattaaattttat-tttttttaaaataattataagatattttccgatac 25256766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 164 - 304
Target Start/End: Original strand, 5984228 - 5984372
Alignment:
Q  164 gaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcca 259  Q
    ||||||||||||||| ||||| |||||||| | |||||| |||||||| |||||||||||  ||    ||||||||| ||||||||| ||||||||||||    
T  5984228 gaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtattctgcaccgatacatgcttgatacttcccaatacgtatctggagagtatcca 5984327  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatactttc 304  Q
    ||||||||||||||| ||||  |||||||||||| ||||| ||||    
T  5984328 aatattaaattttattttttaaaaaaataattattcgataatttc 5984372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 43189655 - 43189796
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||| |||||||||| ||||| ||||| || |||||||| |||||||||||||||||||| |||    ||||||| ||||||||||| |||||||||||    
T  43189655 tgaagacccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatcaggagagtatcc 43189754  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||| | ||||   ||||||||| ||||||||    
T  43189755 aaatattaaatttttttttttaagaaaataattttccgatac 43189796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 9781642 - 9781793
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||| ||||| | ||||||  ||||||| |||||||||||||||||||| |||    |||||| |||||||||||| | |||||||||    
T  9781642 tgaagccctgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatcc 9781741  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || ||||| |||| | |||||| |||||||||||||||||||| |||||||    
T  9781742 gaagattaatttttttttttttttaaaataattatccgatacttcccgatac 9781793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 300
Target Start/End: Complemental strand, 32381175 - 32381036
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagtatccaa 260  Q
    |||||||||||||||||||| |||||  | |||||||| |||| |||| |||||| |||     |||||||||||| ||||||||| ||||||||||| |    
T  32381175 aagccccgatactttaaaatggatgatataccgtatcccctgcatatcatgcaccaatatttgtctgatacttcccaatacgtatcaggagagtatccga 32381076  T
Q  261 atattaaattttatcttttttaaaaataattatccgatac 300  Q
    | |||||||||||| ||||| |||||||||||||||||||    
T  32381075 agattaaattttatttttttaaaaaataattatccgatac 32381036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 2364677 - 2364818
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||| ||||||| ||||| ||| |||| || ||||| |||||||||||||| ||||| |||    |||||| |||||||||||| | |||||||||    
T  2364677 tgaaacccagatacttcaaaatggataacgtaccatatcccctgcgtatcctgcatcgatacctgcccaatactttccgatacgtatcagaagagtatcc 2364776  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
     || |||||||||||| |||||||||||||||||||||||||    
T  2364777 gaagattaaattttattttttttaaaaataattatccgatac 2364818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 173 - 310
Target Start/End: Original strand, 29167957 - 29168098
Alignment:
Q  173 atactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatattaaa 268  Q
    |||||| ||||| ||||||||  | ||||| |||||||||||||||||||| |||    |||||||||| |||||||| ||||||||||| || ||||||    
T  29167957 atacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgcatgatacttcccgttacgtatcaggagagtatccgaagattaaa 29168056  T
Q  269 ttttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||| || ||||| ||||||||||||| ||||||| |||||||    
T  29168057 tttaatttttttaaaaaataattatctgatacttcccgatac 29168098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 13013110 - 13012959
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||| |||||| ||||| |||||| |  ||||||| ||| ||||| ||||| |||| |||    ||||||||||||||||||| |||||||||||    
T  13013110 tgaagccccaatacttcaaaatggatgacatatcgtatcccctgtgtatcatgcactgatacctgcccgatacttcccgatacgtatcgggagagtatcc 13013011  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||   ||||||||| |||||||| | |||||||    
T  13013010 aaatattaaattttattttttaagaaaataattttccgatacgtcccgatac 13012959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 165 - 310
Target Start/End: Complemental strand, 41676105 - 41675956
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaa 260  Q
    ||||||||||| |||||||| |||||||| |||||||  ||||||||| |||||||||| |||    ||||||||  ||| ||||  | ||||||||| |    
T  41676105 aagccccgatattttaaaatggatgacgtaccgtatctcctgcgtatcatgcaccgatacctgtccgatacttcctaatatgtattggaagagtatccga 41676006  T
Q  261 atattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    | |||||||||||| ||||| |||||||||||||| |||||| |||||||    
T  41676005 agattaaattttatttttttaaaaaataattatccaatacttcccgatac 41675956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 160 - 303
Target Start/End: Original strand, 40775992 - 40776139
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagta 255  Q
    |||| |||||| ||||||| ||||| || |||||   |||||| |||||||||||||||| ||| |||    ||||||| ||||||||||| || |||||    
T  40775992 ctctaaagcccagatacttcaaaatggaagacgtaatgtatcccctgcgtatcctgcaccaatatctgcatgatacttctcgatacgtatcaggcgagta 40776091  T
Q  256 tccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    ||| || |||||||||||| ||||| ||||| ||||||||||||||||    
T  40776092 tccgaagattaaattttatttttttaaaaaacaattatccgatacttt 40776139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 300
Target Start/End: Complemental strand, 31653520 - 31653379
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||| ||||| ||| | ||  |||||||  || ||||| |||||||||| |||    ||||||||||||||||||| |||||||||||    
T  31653520 tgaagccctgatacttcaaaatggataatgtatcgtatcccttgtgtatcatgcaccgatatctgcccgatacttcccgatacgtatcgggagagtatcc 31653421  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||| ||||   ||||||||| ||||||||    
T  31653420 aaatattaaattttattttttaagaaaataattttccgatac 31653379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 171 - 312
Target Start/End: Original strand, 14167092 - 14167239
Alignment:
Q  171 cgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatatta 266  Q
    |||||||| ||||| |||||| |  ||||||  ||||||||||||||||||||     ||||||||||| |||||||||| | ||||||||| || ||||    
T  14167092 cgatacttcaaaatggatgacttatcgtatcacctgcgtatcctgcaccgatatctgtctgatacttcctgatacgtatcagaagagtatccgaagatta 14167191  T
Q  267 aattttatct--tttttaaaaataattatccgatactttccgatacat 312  Q
    |||||||| |  ||||| ||||||||||| |||||||| |||||||||    
T  14167192 aattttattttattttttaaaataattattcgatacttcccgatacat 14167239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 24851540 - 24851625
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||  |||| ||||  ||||||||||||| |||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  24851540 ctgatacttcctaatacatatcaagagagtatccaaagattaaattttatttttttaaaaaataattatccgatacttcccgatac 24851625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 312
Target Start/End: Complemental strand, 48715275 - 48715190
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    |||||||||||||||||||| ||||||| ||| || ||||||||||||  |||| ||||||||||||| ||||||| |||||||||    
T  48715275 gatacttcccgatacgtatcaggagagtgtccgaagattaaattttattgttttaaaaaataattatcagatacttcccgatacat 48715190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 10822402 - 10822545
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcacc-gataactg----atacttcccgatacgtatccggagagtatc 257  Q
    ||||||| |||||||| ||||| ||||||||  | ||| | |||||||||||||||| |||| |||    |||||||||||||| | || ||||||||||    
T  10822402 tgaagcctcgatacttcaaaatggatgacgtatcatattccctgcgtatcctgcacccgatatctgtctgatacttcccgatacatctcaggagagtatc 10822501  T
Q  258 caaatattaaattttatcttttttaaa-aataattatccgatac 300  Q
    | || |||||||||||| ||||| ||| ||||||||||||||||    
T  10822502 cgaagattaaattttatttttttaaaataataattatccgatac 10822545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 312
Target Start/End: Original strand, 38218451 - 38218536
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    ||||||||  |||||||||| | ||||||||| || |||||||||||| ||||| |||||||||||| |||||||| |||||||||    
T  38218451 gatacttcttgatacgtatcagaagagtatccgaagattaaattttatttttttaaaaaataattattcgatacttcccgatacat 38218536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 302
Target Start/End: Complemental strand, 3708397 - 3708254
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||||||||||| ||||| ||||||||  |||||||||||| |||||| |||| |||  ||    ||||||  ||||||||||| ||||||||| |    
T  3708397 tgaaaccccgatacttcaaaatggatgacgtatcgtatcctctgcatatcctacaccaatacatgcccgatacttttcgatacgtatcaggagagtattc 3708298  T
Q  259 aaatattaaattttatcttttttaaaa-ataattatccgatactt 302  Q
     ||||||||||||| | |||||||||| |||||||| ||||||||    
T  3708297 gaatattaaatttt-tattttttaaaatataattattcgatactt 3708254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 2472972 - 2472873
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||||||||||||  ||||||| |||| |||||||||||| ||     ||||||||| |||||||||||| |||||||||||    
T  2472972 tgaagctccgatacttcaaaatagatgacgtatcgtatcccctgcatatcctgcaccggtacctgcctgatactttccgatacgtatcaggagagtatcc 2472873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 24590233 - 24590089
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||| ||||||||| ||||  |||| ||| |||||| |  |||||||||||||| |||| |||      |||||||||||||  ||||||||   ||     
T  24590233 tgaagcgccgatacttcaaaagggatggcgtaccgtattccttgcgtatcctgcactgatacctgc-----cccgatacgtatcaagagagtatttgaag 24590139  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    |||||||||||| ||||| ||||||||||||| ||||||| |||||||||    
T  24590138 attaaattttatttttttaaaaaataattatctgatacttcccgatacat 24590089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 299
Target Start/End: Original strand, 14334228 - 14334300
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgata 299  Q
    |||||| ||||||||||||  ||||||||||||||||||||||||||| ||||   ||||||||| |||||||    
T  14334228 gatactccccgatacgtattgggagagtatccaaatattaaattttattttttaagaaaataattttccgata 14334300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 295
Target Start/End: Complemental strand, 34432501 - 34432365
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| ||||||||   |||||| ||||||||| ||||| | || |||    |||||||| |||||||||| |||||||||||    
T  34432501 tgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtatcatgcactggtatctgcctgatacttcctgatacgtatcaggagagtatcc 34432402  T
Q  259 aaatattaaattttatcttttttaaaaataattatcc 295  Q
     || |||||||||||| |||   || |||||||||||    
T  34432401 gaagattaaattttatttttaaaaataataattatcc 34432365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 9528890 - 9528810
Alignment:
Q  226 tgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||||||||||| ||| ||||||  || ||||| ||||    |||||||||||||||||| ||||||| |||||||    
T  9528890 tgatacttcccgatacgtatcgggatagtatctgaagattaattttt----tttttaaaaataattatctgatacttcccgatac 9528810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 34096670 - 34096520
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||||||| || |||||   ||||||  ||||||| |||||||||||||||||||| ||    ||||||| |  ||||| ||| | ||||||||     
T  34096670 tgaagccccgatatttcaaaatgattgacgtatcgtatcccctgcgtatcctgcaccgatatctgcgcgatactttctaatacgcatcagaagagtatct 34096571  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||| ||| | ||||||  ||||||||||||||||||| |||||||    
T  34096570 gaagattaaacttt-ttttttttttaaataattatccgatacttcccgatac 34096520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 211
Target Start/End: Original strand, 24849364 - 24849412
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtat 211  Q
    |||||| ||||||||| |||||||||||||| |||||||| ||||||||    
T  24849364 tgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtat 24849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 303
Target Start/End: Complemental strand, 8829745 - 8829702
Alignment:
Q  260 aatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||    
T  8829745 aatattaaattttatttttttaaaaaacaattatccgatacttt 8829702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 303
Target Start/End: Original strand, 5368619 - 5368684
Alignment:
Q  238 atacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    ||||||||| ||||||||||| || ||| ||| |||| |||| |||||| |||| |||||||||||    
T  5368619 atacgtatctggagagtatccgaaaattgaatcttattttttataaaaacaattgtccgatacttt 5368684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 303
Target Start/End: Complemental strand, 41027988 - 41027920
Alignment:
Q  235 ccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    |||||||||||  ||||||||||| |  |||||||||||| ||||  ||||| |||| |||||||||||    
T  41027988 ccgatacgtattgggagagtatccgacaattaaattttattttttaaaaaaacaattgtccgatacttt 41027920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 1e-53; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 37996929 - 37996774
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||| | ||    |||| |||||||||||||||||||||||||||    
T  37996929 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgagacctgcccgatatttcccgatacgtatccggagagtatcc 37996830  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  37996829 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 37996774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 40497330 - 40497485
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||  ||    |||||||||||||||||||||||||||||||    
T  40497330 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttgcccgatacttcccgatacgtatccggagagtatcc 40497429  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| |||   |||||||||||||||||||||||||||||||||    
T  40497430 aaatattaaattttatttttaaaaaaaataattatccgatactttccgatacatcc 40497485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 55269130 - 55268983
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||     
T  55269130 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgatacttcccgatacgtatcaggagagtatccgaag 55269031  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  55269030 attaaattttatttttttaaaaaataattatccgatacttcccgatac 55268983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 7327712 - 7327863
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||||||| |||||||    
T  7327712 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggatagtatcc 7327811  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  7327812 aaatattaaattttatttttttaaaaaataattatccgatacatcccgatac 7327863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 22611492 - 22611351
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||| ||||||||||||| |||      |||||||||||||||||||||||||||||    
T  22611492 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtttcctgcaccgatacctg------cccgatacgtatccggagagtatccaaat 22611399  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||||    
T  22611398 attaaattttattttttaaaaaaataattatccgatactttccgatac 22611351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 28704727 - 28704882
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||| |||||||| |||| |||||||||| |||| ||    ||||||| || ||| ||||||||||||||||     
T  28704727 tgaagccccgatactttaaaatggatgacgtaccgtatcccctgcatatcctgcactgatacctatccgatactttccaatatgtatccggagagtatca 28704826  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||    
T  28704827 aaatattaaattttatttttttaaaaaataattatccgatactttctgatacatcc 28704882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 300
Target Start/End: Complemental strand, 42465025 - 42464884
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||| |||    ||||||||||||||||||||| |||||||||    
T  42465025 tgaagccccgatacttcaaaatggatgacgtactgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatcc 42464926  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||| ||||||  |||| |||||||||||||||||||    
T  42464925 aaatattaatttttattgttttaaaaaataattatccgatac 42464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 158 - 310
Target Start/End: Complemental strand, 1679821 - 1679665
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| ||| |||| |||||||| |||| ||||||||||||||| |||    ||||||||||||||||||||||||||    
T  1679821 acctgtgaagccccgatacttcaaaatggataacgtaccgtatccactgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccggagag 1679722  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||||||||||| |||   ||||||||||||||||||| | |||||||    
T  1679721 tatccaaatattaaattttatttttaaaaaaaataattatccgatacatcccgatac 1679665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 10225269 - 10225127
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||| ||||||||||||| ||||||||  ||||||| ||||||||||||||||||||       ||| ||||||||||||||||||||||||||||    
T  10225269 tgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgata-------ctttccgatacgtatccggagagtatccaaat 10225177  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    |||||||||||| ||||  |||||||||||||||||||||| ||||||||    
T  10225176 attaaattttattttttaaaaaaataattatccgatacttttcgatacat 10225127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 48122822 - 48122966
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagta 255  Q
    ||||||||||||||||||| ||||| |||||||| |||||||| |||| |||||||||||||||  ||    ||| |||||||||||||||| |||||||    
T  48122822 ctctgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacatgcccgatatttcccgatacgtatccagagagta 48122921  T
Q  256 tccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  48122922 tccaaatattaaattttatttttttaaaaaataattatccgatac 48122966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 35389750 - 35389901
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||| |||||||||||    
T  35389750 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatcc 35389849  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||   ||||||||| |||||||| | |||||||    
T  35389850 aaatattaaattttattttttaagaaaataattttccgatacatcccgatac 35389901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 53192495 - 53192629
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatcca 259  Q
    ||||||||||||||||||| ||||| |||||||| |||||| | ||| |||||||||||||||| |||      ||||||||||||||||||||||||||    
T  53192495 ctctgaagccccgatacttcaaaatggatgacgtaccgtataccctgagtatcctgcaccgatacctg------cccgatacgtatccggagagtatcca 53192588  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  53192589 aatattaaattttatttttttaaaaaataattatccgatac 53192629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 28882796 - 28882645
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| |||||||| |||||||| ||||||||| ||||||||||  ||    |||||| |||||||||||| |||||||||||    
T  28882796 tgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcatgcaccgatatatgcccgatactttccgatacgtatcgggagagtatcc 28882697  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||   ||||||||| ||||||||||||||||||    
T  28882696 aaatattaaattttattttttaagaaaataattttccgatactttccgatac 28882645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 52505950 - 52505796
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||| || | |||||| |||||||||||||||||||| | |    ||| ||||||||||||||||| |||||||||    
T  52505950 tgaagccccgatacttaaaaatggatgatgtactgtatcc-ctgcgtatcctgcaccgataccggcccgatatttcccgatacgtatccgaagagtatcc 52505852  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| |||   |||||||||||||||||||||| ||||||||||    
T  52505851 aaatattaaattttatttttcaaaaaaataattatccgatacttttcgatacatcc 52505796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 160 - 309
Target Start/End: Complemental strand, 6134503 - 6134350
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagta 255  Q
    ||||||||||| ||||||| ||||| ||||||||  ||||||| ||||||||||||||||||||     |||||||||||||||| ||||| ||||||||    
T  6134503 ctctgaagccctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacatacctgatacttcccgatatgtatcaggagagta 6134404  T
Q  256 tccaaatattaaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    ||| || ||||||| |||| ||||  ||||||||||||||||||||| ||||||    
T  6134403 tccgaagattaaatattattttttaaaaaaataattatccgatacttcccgata 6134350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 2567499 - 2567361
Alignment:
Q  169 cccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaatattaaa 268  Q
    |||||||||| ||||| ||||||||  |||||   ||||||||||||||||||||       ||||||||||||||||| |||||||||| |||||||||    
T  2567499 cccgatacttcaaaatggatgacgtatcgtatttcctgcgtatcctgcaccgata-------cttcccgatacgtatccagagagtatccgaatattaaa 2567407  T
Q  269 ttttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||    
T  2567406 ttttattttttaaaaaaataattatccgatactttccgatacatcc 2567361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 163 - 311
Target Start/End: Original strand, 52121180 - 52121332
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||||  ||| |||    ||||||| ||||||||||| |||||||||||    
T  52121180 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactaatacctgtccgatacttctcgatacgtatcgggagagtatcc 52121279  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgataca 311  Q
    |||||||||||||||| ||||  |||||||||| | |||||||||| ||||||    
T  52121280 aaatattaaattttattttttaaaaaaataatttttcgatactttctgataca 52121332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 13748565 - 13748415
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| | ||||||  |||||||||||||||||||||||||||| ||    ||||||| |||||||||||| | |||||||||    
T  13748565 tgaagccccgatacttcaaaatggttgacgtatcgtatcctctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatcc 13748466  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| |||||| |||||||||||| ||||||| |||||||    
T  13748465 gaagattaaattttat-tttttttaaaataattatctgatacttcccgatac 13748415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 164 - 310
Target Start/End: Original strand, 28968511 - 28968661
Alignment:
Q  164 gaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcca 259  Q
    ||||||||||||||| ||||| |||||||| || |||||| | ||||||||||||||||| |||    ||||||||||||||||||| | |||||||||     
T  28968511 gaagccccgatacttcaaaatggatgacgtaccatatcctttacgtatcctgcaccgatacctgcccgatacttcccgatacgtatcagaagagtatccg 28968610  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    || |||||||||||| |||   ||||||||||||||||||||| |||||||    
T  28968611 aagattaaattttatttttaaaaaaaataattatccgatacttcccgatac 28968661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 1528499 - 1528641
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatcca 259  Q
    ||||||||| ||||||||| ||||| ||||||||  | ||||| ||||||||| |||| ||||| |||      ||||||||||||||||||||||||||    
T  1528499 ctctgaagctccgatacttcaaaatggatgacgtatcatatcccctgcgtatcatgcatcgatacctg------cccgatacgtatccggagagtatcca 1528592  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    ||||||||||||||| ||||  |||||||||||||||||| |||||||||    
T  1528593 aatattaaattttat-ttttaaaaaaataattatccgatattttccgata 1528641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 22310705 - 22310856
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| | ||| |||||||| |||||||| ||| ||||||||||||||||     ||||||||||||||||||||||   ||||||||     
T  22310705 tgaagccccgatacttcacaatggatgacgtaccgtatcccctgtgtatcctgcaccgatacctgcctgatacttcccgatacgtatcgatagagtatca 22310804  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||   ||||||||| |||||||||||| |||||    
T  22310805 aaatattaaattttattttttaagaaaataattttccgatactttctgatac 22310856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 52684201 - 52684352
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||||||||||||  ||||||   ||||||||||||||||||| |||    |||||| |||||||||||  |||||||||||    
T  52684201 tgaagctccgatacttcaaaatagatgacgtatcgtatctcatgcgtatcctgcaccgatacctgtccgatactttccgatacgtattaggagagtatcc 52684300  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     ||||||||||||||| |||   |||||||||||||||||| ||||||||||    
T  52684301 gaatattaaattttatttttaaaaaaaataattatccgatattttccgatac 52684352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 41742190 - 41742039
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| ||||||||   |||||||||| ||||||||||||||||     ||||||||||||||||| |||| |||||||||||    
T  41742190 tgaagcgccgatacttcaaaatggatgacgtattgtatcctctgtgtatcctgcaccgataccttcctgatacttcccgatacatatctggagagtatcc 41742091  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| |||   ||||||||||||||| ||||| |||||||    
T  41742090 gaagattaaattttatttttaaaaaaaataattatccggtacttcccgatac 41742039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 304
Target Start/End: Complemental strand, 22289839 - 22289694
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||| |||||||| ||||| ||||||||  ||||||| |||||||||||||||| ||| |||    |||||||| |||||||||| |||||||||||    
T  22289839 tgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccaatacctgcatgatacttcctgatacgtatcaggagagtatcc 22289740  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttc 304  Q
     || |||||||||||| | ||| ||||||||| ||| |||||||||    
T  22289739 gaagattaaattttatttctttaaaaaataatcatctgatactttc 22289694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 25937176 - 25937027
Alignment:
Q  169 cccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatat 264  Q
    |||||||||||||||| ||||||||  ||||||  ||||||||||| |||| |||  ||    |||||| |||||||||||| |||||||||| ||||||    
T  25937176 cccgatactttaaaatggatgacgtatcgtatctcctgcgtatcctacaccaatacatgcccgatactttccgatacgtatctggagagtatctaaatat 25937077  T
Q  265 taaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||| |||   |||| |||||||||||||||||| |||||||||    
T  25937076 taaattttatttttaaaaaaattaattatccgatactttctgatacatcc 25937027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 152 - 303
Target Start/End: Original strand, 3983686 - 3983842
Alignment:
Q  152 gtgagaacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatcc 247  Q
    ||||||| || |||||| |  ||||||| |||| |||||||| | |||||||| | ||||||||||||||||     ||||||||||||||||||||||     
T  3983686 gtgagaagctatgaagctcatatacttttaaatggatgacgtactgtatcctccgtgtatcctgcaccgatacttgtctgatacttcccgatacgtatca 3983785  T
Q  248 ggagagtatccaaatattaaattttatcttttt-taaaaataattatccgatacttt 303  Q
    ||||||||||| || |||||||||||| |||||  ||||| ||||||||||||||||    
T  3983786 ggagagtatccgaagattaaattttatttttttaaaaaaagaattatccgatacttt 3983842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 19421482 - 19421567
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||||||||| ||||||||||| || |||||||||||| ||||| |||| |||||||||||||||| |||||||    
T  19421482 ctgatacttcccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaagtaattatccgatacttcccgatac 19421567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 310
Target Start/End: Original strand, 25700794 - 25700912
Alignment:
Q  197 gtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatattaaattttatctt-ttttaaaaataatt 291  Q
    |||||||||||||||||||||||||||     |||||||||||  ||||||||| ||||||||||| || |||||||||||| || |||| |||||||||    
T  25700794 gtatcctctgcgtatcctgcaccgatacctgcctgatacttcctaatacgtatcaggagagtatccgaagattaaattttattttatttttaaaataatt 25700893  T
Q  292 atccgatactttccgatac 310  Q
    ||||||||||| |||||||    
T  25700894 atccgatacttcccgatac 25700912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 19879211 - 19879070
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    ||||||| | |||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||      ||||||| ||||  ||||||||||| ||     
T  19879211 tgaagccgcaatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctg------cccgatatgtataaggagagtatccgaag 19879118  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||| |||||||| ||||  ||||||||||||||||||||| |||||||    
T  19879117 attcaattttattttttaaaaaaataattatccgatacttcccgatac 19879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 302
Target Start/End: Complemental strand, 21157847 - 21157704
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||| ||||| ||||||||  ||||| ||||| | ||||||||  ||||||||    |||||| | |||||||| | |||||||||||    
T  21157847 tgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatactttctgatacgtaccaggagagtatcc 21157748  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
     || |||||||||||| ||||| |||||||||||||||||||||    
T  21157747 gaagattaaattttatttttttaaaaaataattatccgatactt 21157704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 227 - 300
Target Start/End: Complemental strand, 45533030 - 45532957
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||   |||||||||||||||||||    
T  45533030 gatacttcccgatacgtatccgaagagtatccaaatattaaattttatttttaaaaaaaataattatccgatac 45532957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 47642017 - 47642157
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    ||||||| |||||||| ||||| |||||||| ||||||||  |||||||||||||||||||       |||||| ||||||||| | ||||||||| ||     
T  47642017 tgaagcctcgatacttcaaaatggatgacgtaccgtatcccatgcgtatcctgcaccgata-------cttcccaatacgtatcagaagagtatccgaag 47642109  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| || |  ||||||||||||| ||||||| |||||||    
T  47642110 attaaattttattttataaaaaaataattatctgatacttcccgatac 47642157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 42229674 - 42229815
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| || |||||| ||||||||||||||    ||||| |||||||||||||||||||| |||    |||||||| |||||||||| | |||||||||    
T  42229674 tgaagctccaatacttcaaaatagatgacgtattatatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcagaagagtatcc 42229773  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
     || |||||||||||| |||   |||||||||||||||||||    
T  42229774 gaaaattaaattttatttttaaaaaaaataattatccgatac 42229815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 160 - 303
Target Start/End: Original strand, 5271476 - 5271612
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatcca 259  Q
    |||||||| ||  |||||| |||||||||||| | | ||||||  ||||||||||| ||||||| ||      |||||||||||||| |||||||||||     
T  5271476 ctctgaagtccatatacttcaaaatagatgacatactgtatcccttgcgtatcctgaaccgatacct------tcccgatacgtatcaggagagtatccg 5271569  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
     | |||||||||||| ||||||||||| ||||||||||||||||    
T  5271570 gagattaaattttat-ttttttaaaaaaaattatccgatacttt 5271612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 303
Target Start/End: Original strand, 30226420 - 30226563
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||  |||||| ||||| |||||| |  |||||||||||||||||||||||||||| ||    ||||||| | ||||||||||  ||||||||||    
T  30226420 tgaagcccatatacttcaaaatggatgacttatcgtatcctctgcgtatcctgcaccgatacctgcccgatactttctgatacgtatcaagagagtatcc 30226519  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
     || |||||||||||| ||||| ||||  ||||||| ||||||||    
T  30226520 gaagattaaattttat-tttttaaaaaccaattatctgatacttt 30226563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 7899770 - 7899685
Alignment:
Q  226 tgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttt-taaaaataattatccgatactttccgatac 310  Q
    ||||| ||||||||||||||| | ||||||||| || |||||||||||| |||||  ||||||||||||||||||||| |||||||    
T  7899770 tgatatttcccgatacgtatcagaagagtatccgaagattaaattttatttttttacaaaaataattatccgatacttcccgatac 7899685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 29915861 - 29915959
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatc 257  Q
    ||||| |||||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||     |||||||||||||||||||||| ||| ||||||    
T  29915861 tgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacctgtctgatacttcccgatacgtatcaggatagtatc 29915959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 257
Target Start/End: Original strand, 29965014 - 29965112
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatc 257  Q
    ||||| |||||||||| ||||||||||||||  ||||||| ||||||||| ||||||||||     |||||||||||||||||||||| ||| ||||||    
T  29965014 tgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacctgtctgatacttcccgatacgtatcaggatagtatc 29965112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 312
Target Start/End: Complemental strand, 30787680 - 30787526
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  ||||||| |||||||||||| || ||||      ||| ||||| ||||||||||| |||||||||||    
T  30787680 tgaagccccgatacttcaaaatcgatgacgtatcgtatcccctgcgtatcctgtactgatacttgtttgacacttctcgatacgtatcaggagagtatcc 30787581  T
Q  259 aaatattaaattttatcttttttaaa-aataattatccgatactttccgatacat 312  Q
     || |||||||||||| ||    ||| ||||||||||| |||||| |||||||||    
T  30787580 gaagattaaattttattttaaaaaaataataattatcctatacttcccgatacat 30787526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 302
Target Start/End: Original strand, 45347365 - 45347441
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatctttttt-aaaaataattatccgatactt 302  Q
    |||||||  ||||||||||||| ||||||||| || |||||||||||| |||||| |||||||||||||||||||||    
T  45347365 gatacttttcgatacgtatccgaagagtatccgaagattaaattttattttttttaaaaaataattatccgatactt 45347441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 300
Target Start/End: Original strand, 33239992 - 33240091
Alignment:
Q  205 tgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||||||| ||||| |||    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||   |||||||||  |||||||    
T  33239992 tgcgtatcctgcatcgatacctgcccgatacttcccgatacgtatcgggagagtatccaaatattatattttattttttaagaaaataatttaccgatac 33240091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 225 - 274
Target Start/End: Original strand, 983260 - 983309
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttat 274  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  983260 ctgatacttcccgatacgtatcaggagagtatccaaagattaaattttat 983309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 2122704 - 2122822
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctct---gcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagta 255  Q
    |||||||||||||||| ||||| ||||||||   |||||| ||   ||||||| ||||||||||     |||||||||||||||||||||| |||||| |    
T  2122704 tgaagccccgatacttcaaaatggatgacgtattgtatcccctcctgcgtatcatgcaccgatacttgcctgatacttcccgatacgtatcaggagagaa 2122803  T
Q  256 tccaaatattaaattttat 274  Q
    ||| || ||||||||||||    
T  2122804 tccgaagattaaattttat 2122822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 302
Target Start/End: Complemental strand, 25322524 - 25322447
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    |||||||||  ||||||||||| | |||||||| ||  |||||||||||| || ||| ||||||||||||||||||||    
T  25322524 ctgatacttttcgatacgtatcggaagagtatcaaaccattaaattttattttattttaaaataattatccgatactt 25322447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 19420905 - 19420961
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcacc 219  Q
    |||||||||||||||| ||||| ||||||||  ||||||| ||||||||||||||||    
T  19420905 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcacc 19420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 310
Target Start/End: Complemental strand, 47750997 - 47750856
Alignment:
Q  174 tactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacg--tatccggagagtatccaaatattaa 267  Q
    ||||| ||||| |||||||| |  |||||||||||||||||||||||||| ||    |||||||  | |||||  |||  | |||||||| ||  |||||    
T  47750997 tacttcaaaatggatgacgtactatatcctctgcgtatcctgcaccgatagctgctcgatacttttcaatacgtatattagaagagtatcaaatcattaa 47750898  T
Q  268 attttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||  |||||||||||||||||| ||||||| |||||||    
T  47750897 attttat-atttttaaaaataattatctgatacttcccgatac 47750856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 39663997 - 39664107
Alignment:
Q  202 ctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccga 297  Q
    |||||||||||||||||||||| ||    ||||||| |||||||||||| | | ||||| | || ||||| |||||| ||||||   |||||||||| ||    
T  39663997 ctctgcgtatcctgcaccgatacctgtccgatactttccgatacgtatcagaatagtattcgaagattaatttttatttttttt--taataattatctga 39664094  T
Q  298 tactttccgatac 310  Q
    ||||| |||||||    
T  39664095 tacttcccgatac 39664107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Complemental strand, 13353178 - 13353145
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||||||    
T  13353178 ctgatacttcccgatacgtatcaggagagtatcc 13353145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 172 - 310
Target Start/End: Complemental strand, 20510265 - 20510123
Alignment:
Q  172 gatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatattaa 267  Q
    ||||||| ||||| |||||||   |||||||  |||||||| || ||||||| |||    |||||| || |||||||||  |||| ||||  || |||||    
T  20510265 gatacttcaaaatggatgacgcatcgtatcccgtgcgtatcttgtaccgatacctgtttgatactttccaatacgtatcaagagaatatctgaagattaa 20510166  T
Q  268 attttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||| |||   ||||||||||||| ||||||| |||||||    
T  20510165 attttatttttaaaaaaaataattatctgatacttcccgatac 20510123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 47642141 - 47642174
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||||||    
T  47642141 ctgatacttcccgatacgtatcaggagagtatcc 47642174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 13353296 - 13353244
Alignment:
Q  171 cgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata 223  Q
    |||||||||||||| ||||||||  ||||||  ||||||||||||| ||||||    
T  13353296 cgatactttaaaatggatgacgtatcgtatctcctgcgtatcctgcgccgata 13353244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 48333147 - 48333195
Alignment:
Q  226 tgatacttcccgatacgtatccggagagtatccaaatattaaattttat 274  Q
    |||||||||| |||||||||| ||| ||||||| || ||||||||||||    
T  48333147 tgatacttcctgatacgtatcaggaaagtatccgaagattaaattttat 48333195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 1e-53; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 7876714 - 7876869
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  7876714 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 7876813  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  7876814 aaatattaaattttattttttaaaaaaataattatccgatactttccgatacatcc 7876869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 40309015 - 40308860
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| |||||||||||||| ||||||||  ||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  40309015 tgaagccccgatacttcaaaatagatgacgtaccgtatcccatgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 40308916  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| |||   |||||||||||||||||||||| | ||||||||    
T  40308915 aaatattaaattttatttttaaaaaaaataattatccgatacttttcaatacatcc 40308860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 157 - 314
Target Start/End: Original strand, 16561794 - 16561955
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||||||||||||| ||||| |||||||| ||||||||  ||||||| ||||||||||| |||    |||||||||||||||||||||||||    
T  16561794 aacctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccttgcgtattctgcaccgatacctgcccgatacttcccgatacgtatccggaga 16561893  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||||||||| |||||  ||||||||| |||||| |||||||||||||||    
T  16561894 gtatccaaatattaaattttatttttttataaaataattgtccgatgctttccgatacatcc 16561955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 7807492 - 7807337
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  ||||||| ||||||||| || ||||||| |||    ||||||||||||||||||||||| |||||||    
T  7807492 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgtaccgatacctgttcgatacttcccgatacgtatccggaaagtatcc 7807393  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  7807392 aaatattaaattttatttttttaaaaaataactatccgatactttccgatacatcc 7807337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 33324818 - 33324969
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||| || |||||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  33324818 tgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 33324917  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||   ||||||||||||| |||||||||||||||    
T  33324918 aaatattaaattttatttttaaaaaaaataattatctgatactttccgatac 33324969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 38602440 - 38602289
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  38602440 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 38602341  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||   ||||||||||||| |||||||||| ||||    
T  38602340 aaatattaaattttatttttaaaaaaaataattatctgatactttccaatac 38602289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 158 - 310
Target Start/End: Original strand, 22484262 - 22484418
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| ||||| || |||||| | |||||||||||||| ||||| |||    ||||||||||||||||||||||||||    
T  22484262 acctatgaagccccgatacttcaaaatggatgatgtaccgtattccctgcgtatcctgcatcgatatctgtccgatacttcccgatacgtatccggagag 22484361  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  22484362 tatccaaatattaaattttatttttttaaaaaataattatccgatacatcccgatac 22484418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 157 - 300
Target Start/End: Complemental strand, 4170626 - 4170479
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggaga 252  Q
    ||||| |||||| ||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||     ||||||||||||||||||||||||||||    
T  4170626 aacctgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatccggaga 4170527  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||||||||| |||   |||||||||||||||||||    
T  4170526 gtatccaaatattaaattttatttttaaaaaaaataattatccgatac 4170479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 6124173 - 6124328
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| ||||||||   |||||| ||| ||||||||||||||||  ||    |||||||| ||||||||||||||||||||||    
T  6124173 tgaagccccgatactttaaaatggatgacgtattgtatcccctgtgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtatcc 6124272  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||  |||||||||||||||||||||| ||||||||||    
T  6124273 aaatattaaattttattttttaaaaaaataattatccgatactttgcgatacatcc 6124328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 300
Target Start/End: Complemental strand, 6497767 - 6497626
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    ||||| |||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||     ||||| ||||||||||||||||||||||||||||    
T  6497767 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtctgattcttcccgatacgtatccggagagtatcc 6497668  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  6497667 aaatattaaattttattttttaaaaaaataattatccgatac 6497626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 22570937 - 22571093
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||    ||||||||| ||||||||||||| ||||||||    
T  22570937 tgaagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggggagtatcc 22571036  T
Q  259 aaatattaaattttatct-tttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| |      ||||||||| ||| |||||||||||||||||||    
T  22571037 aaatattaaattttatttaaaaaaaaaaataataatctgatactttccgatacatcc 22571093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 34146180 - 34146323
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||||||||| ||||||||  |||||| ||||||||| |||||||||||     |||||||||||||||||||||| |||||||||||    
T  34146180 tgaagctccgatactttaaaatggatgacgtatcgtatcttctgcgtattctgcaccgatatctgcctgatacttcccgatacgtatcaggagagtatcc 34146279  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    ||| |||||||||||| |||   |||||||||||||||||||||    
T  34146280 aaagattaaattttatttttaaaaaaaataattatccgatactt 34146323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 159 - 310
Target Start/End: Original strand, 4355321 - 4355476
Alignment:
Q  159 cctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagt 254  Q
    ||||||||||| |||||||| ||||| ||||||||  ||||| | |||||||| ||||||||||| |||    ||||||||||||||||||| |||||||    
T  4355321 cctctgaagcctcgatacttcaaaatggatgacgtatcgtattccctgcgtattctgcaccgatacctgcttgatacttcccgatacgtatcaggagagt 4355420  T
Q  255 atccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    || |||| |||||||||||| ||||  |||| |||||||||||||||| |||||||    
T  4355421 atgcaaagattaaattttattttttaaaaaactaattatccgatacttcccgatac 4355476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 169 - 312
Target Start/End: Complemental strand, 8483029 - 8482882
Alignment:
Q  169 cccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatat 264  Q
    |||||||||| |||||  |||||||  |||||||| |||||||||||||||||||     ||||||||| |||||||||||| | ||||||||| || ||    
T  8483029 cccgatacttcaaaatgaatgacgtatcgtatcctttgcgtatcctgcaccgatatctgtctgatactttccgatacgtatcagaagagtatccgaagat 8482930  T
Q  265 taaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    |||||||||| ||||| |||||||||||||||||||||  ||||||||    
T  8482929 taaattttatttttttaaaaaataattatccgatacttcgcgatacat 8482882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 18300972 - 18301123
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||| ||||| ||||||||  ||||||| ||| |||| |||||||||||     |||||||||| ||||||||||| |||||||||||    
T  18300972 tgaagccctgatacttcaaaatggatgacgtatcgtatcccctgtgtattctgcaccgatacctgtctgatacttctcgatacgtatcgggagagtatcc 18301071  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||   ||||||||| | ||||||||||||||||    
T  18301072 aaatattaaattttattttttaagaaaataatttttcgatactttccgatac 18301123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 44156597 - 44156741
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||||||||||| ||||| |||||| |  ||||||| ||||||||| |||| |||||     |||||||||||||||||||||| |||||||||||    
T  44156597 tgaatccccgatacttcaaaatggatgacatatcgtatcccctgcgtatcatgcatcgatacatgtctgatacttcccgatacgtatcaggagagtatcc 44156696  T
Q  259 aaatattaaattttatctttttt-aaaaataattatccgatactt 302  Q
     || |||||||||||| |||||| |||||||||||||||||||||    
T  44156697 gaagattaaattttattttttttaaaaaataattatccgatactt 44156741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 2319275 - 2319426
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||||||||||| ||||| ||||||||  ||||||| ||||||||| ||||||||||  ||    |||||||| |||||||||| | |||||||||    
T  2319275 tgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgcaccgatacttgcttgatacttcctgatacgtatcagaagagtatcc 2319374  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  2319375 gaagattaaattttatttttttaaaaaataattatccgatacgtcccgatac 2319426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 158 - 299
Target Start/End: Original strand, 21104477 - 21104622
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagag 253  Q
    |||| ||||||||| |||||||||||| ||||||||  ||||||||||||||||| ||||||||||     |||||| |||||||||||||||    |||    
T  21104477 acctatgaagccccaatactttaaaatggatgacgtatcgtatcctctgcgtatcttgcaccgatatctgtctgatatttcccgatacgtatcaaaggag 21104576  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgata 299  Q
    ||||| || |||||||| ||  ||||||||||||||||||||||||    
T  21104577 tatccgaagattaaattatactttttttaaaaataattatccgata 21104622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 310
Target Start/End: Complemental strand, 31236310 - 31236153
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||||||||||||||||||| ||| ||||   |||||| |||||||||||||||| | | |||    ||| ||||||||||||||| |||||    
T  31236310 aacctgtgaagccccgatactttaaaatggataacgtattgtatcccctgcgtatcctgcacccacacctgcatgatatttcccgatacgtatcaggaga 31236211  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||| || |||||||||||  ||||| ||||||||| | ||||||||| |||||||    
T  31236210 gtatccgaagattaaattttaattttttaaaaaataatcagccgatacttcccgatac 31236153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 14217275 - 14217117
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagta 255  Q
    ||||||||| ||||||||| ||||| ||||||||   |||||| |||||||| ||||||||||| |||    |||||| |||||||||||| ||||||||    
T  14217275 ctctgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtattctgcaccgatatctgtttgatactttccgatacgtatctggagagta 14217176  T
Q  256 tccaaatattaaattttatctttttta----aaaataattatccgatactttccgatac 310  Q
    || ||| |||||||||| | ||||||     |||||||||||||||||||| |||||||    
T  14217175 tctaaagattaaattttttttttttttttttaaaataattatccgatacttcccgatac 14217117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 152 - 310
Target Start/End: Complemental strand, 28746781 - 28746623
Alignment:
Q  152 gtgagaacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatcc 247  Q
    |||||||||| |||||||||||||||| ||||| | ||||||  ||||||| |||||||||||||||||||| ||    |||||||  |||||||||||     
T  28746781 gtgagaacctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttttcgatacgtatca 28746682  T
Q  248 ggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    | ||||||||| || ||||| |||    ||||||  ||||||||||||||||||| |||||||    
T  28746681 gaagagtatccgaagattaatttt----ttttttttaaataattatccgatacttcccgatac 28746623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 161 - 310
Target Start/End: Original strand, 3563849 - 3563991
Alignment:
Q  161 tctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaa 260  Q
    |||||||||||||||||| ||||| ||||||||   |||||| || | ||| ||||||       ||||||||||||||||||||| ||||||||||| |    
T  3563849 tctgaagccccgatacttcaaaatggatgacgtattgtatcccctacatattctgcac-------tgatacttcccgatacgtatcaggagagtatccga 3563941  T
Q  261 atattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    | |||||||||||| | ||| ||||||||||||| ||||||| |||||||    
T  3563942 agattaaattttatttctttaaaaaataattatctgatacttcccgatac 3563991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 35342317 - 35342469
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccga----taactgatacttcccgatacgtatccggagagtatcc 258  Q
    ||||| |||||||||| ||||| |||||||| ||||||||  |||||||||||||||||    || ||||||||||||||||||||||   |||||||||    
T  35342317 tgaagtcccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctacctgatacttcccgatacgtatcaaaagagtatcc 35342416  T
Q  259 aaatattaaattttatcttt-tttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| |||    ||||||||||||| ||||||| |||||||    
T  35342417 gaagattaaattttatttttaaaaaaaaataattatctgatacttcccgatac 35342469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 274
Target Start/End: Complemental strand, 37134419 - 37134301
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataac----tgatacttcccgatacgtatccggagagta 255  Q
    |||| |||||| ||||||| |||||||||||||| |||||||||||||||||||||||| |||| |    |||||||||||||||||||||  |||||||    
T  37134419 ctctaaagcccagatacttcaaaatagatgacgtaccgtatcctctgcgtatcctgcactgatatctgcttgatacttcccgatacgtatcaagagagta 37134320  T
Q  256 tccaaatattaaattttat 274  Q
    |   || ||||||||||||    
T  37134319 tatgaagattaaattttat 37134301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 1005513 - 1005655
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact---gatacttcccgatacgtatccggagagtatcca 259  Q
    |||||| | ||||||| ||||| ||||||||  ||||||| |||||||||||||||||||| ||   |||||||||||||||||||  | ||||||||      
T  1005513 tgaagctctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgtcgatacttcccgatacgtattagaagagtatctg 1005612  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatactt 302  Q
    || |||||||||||| | ||||  ||||||||||| |||||||    
T  1005613 aagattaaattttatttattttttaaataattatctgatactt 1005655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 20536775 - 20536916
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| ||||||||  ||||||| |||| |||||||||||||||  ||      ||||||||||||| | |||||||||||||    
T  20536775 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcatatcctgcaccgatacttg------cccgatacgtatcggaagagtatccaaat 20536868  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| |||   |||||||| | |||||||| | |||||||    
T  20536869 attaaattttatttttaaaaaaaataaatttccgatacgtcccgatac 20536916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 45159416 - 45159276
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| ||||||||  |||||||  |||||||| |||||| ||| |||      ||||||||||||| | ||||||| | |||    
T  45159416 tgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgcaccaatatctg------cccgatacgtatctgaagagtattcgaat 45159323  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| ||||  ||||||| |||||||||||||||||||||    
T  45159322 attaaattttat-ttttaaaaaaatacttatccgatactttccgatac 45159276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 310
Target Start/End: Original strand, 35996677 - 35996793
Alignment:
Q  197 gtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataatta 292  Q
    |||||| ||||||||| |||||||||| |||    ||||||  ||||||||||| ||||||||| | || |||||||||||| ||||| |||||||||||    
T  35996677 gtatcccctgcgtatcttgcaccgatacctgttcgatacttttcgatacgtatcaggagagtattcgaagattaaattttat-tttttaaaaaataatta 35996775  T
Q  293 tccgatactttccgatac 310  Q
    |||||||||| |||||||    
T  35996776 tccgatacttcccgatac 35996793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 4561788 - 4561940
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| || |||||| ||||| ||||||||  ||||| |  || |||||||||||||||| |||    |||||||||||||| |||| | |||||||||    
T  4561788 tgaagctccaatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatacctgcccgatacttcccgatacatatcagaagagtatcc 4561887  T
Q  259 aaatattaaattttatcttttt-taaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| |||||  ||||||||||||| ||||||| |||||||    
T  4561888 gaagattaaattttatttttttaaaaaaataattatctgatacttcccgatac 4561940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 272
Target Start/End: Original strand, 24585528 - 24585642
Alignment:
Q  161 tctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtat 256  Q
    |||||||||||||||||| ||||| ||||| ||  ||||||| ||||||||||||||||||||     ||||||||||| |||||||||| |||| ||||    
T  24585528 tctgaagccccgatacttcaaaatggatgatgtatcgtatcc-ctgcgtatcctgcaccgatacctgtctgatacttccagatacgtatcaggagtgtat 24585626  T
Q  257 ccaaatattaaatttt 272  Q
    ||||| ||||| ||||    
T  24585627 ccaaagattaattttt 24585642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 172 - 303
Target Start/End: Complemental strand, 40497495 - 40497363
Alignment:
Q  172 gatactttaaaa-tagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatatta 266  Q
    |||||||||||| | |||||||| || ||||| ||||||||| ||||  |||| |||    ||||||||||||||||||| |||||||||||||| ||||    
T  40497495 gatactttaaaaatggatgacgtaccttatcccctgcgtatcttgcagtgatacctgtctgatacttcccgatacgtatcaggagagtatccaaagatta 40497396  T
Q  267 aattttatcttttttaaaaataattatccgatacttt 303  Q
    |||||||    |||| |||| ||||||||||||||||    
T  40497395 aatttta----tttttaaaacaattatccgatacttt 40497363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 158 - 310
Target Start/End: Complemental strand, 1776559 - 1776403
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| | ||||||  |||||||  ||||||| ||||||||||| |||    ||  || |||||||||||| | ||||    
T  1776559 acctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccttgcgtattctgcaccgatacctgcccgatcatttccgatacgtatcagaagag 1776460  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||| || |||||||||||| ||||  ||||| ||| || |||||||| |||||||    
T  1776459 tatccgaagattaaattttattttttaaaaaaaaaatcattcgatacttcccgatac 1776403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 160 - 293
Target Start/End: Original strand, 25933562 - 25933699
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccga----taactgatacttcccgatacgtatccggagagta 255  Q
    |||||||||||  |||||| ||||| ||||| ||  ||||||| ||||||||| |||||| |    || |||||||||| ||||||  ||| ||||||||    
T  25933562 ctctgaagcccatatacttcaaaatggatgatgtatcgtatcccctgcgtatcatgcaccaatatctatctgatacttctcgatacagatcaggagagta 25933661  T
Q  256 tccaaatattaaattttatcttttttaaaaataattat 293  Q
    ||| || ||||||||| || ||||  ||||||||||||    
T  25933662 tccgaagattaaatttaattttttgaaaaaataattat 25933699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 5588107 - 5588208
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| ||||||||  ||||||||||  ||||| |||||||||| |||    |||||||| ||||| ||||  ||||||||||    
T  5588107 tgaagctccgatacttcaaaatggatgacgtatcgtatcctctttgtatcttgcaccgatacctgtctcatacttcctgatacatatcatgagagtatcc 5588206  T
Q  259 aa 260  Q
    ||    
T  5588207 aa 5588208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 4561924 - 4561957
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||||||    
T  4561924 ctgatacttcccgatacgtatcaggagagtatcc 4561957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 14824148 - 14824290
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    ||||| |||||||||| ||||||||||||||  ||||||   |||||||| |||||||||| |||       | |||||||||| | ||||||||| ||     
T  14824148 tgaagtcccgatacttcaaaatagatgacgtatcgtatctcttgcgtatcatgcaccgatatctg------tctgatacgtatcagaagagtatccgaag 14824241  T
Q  263 attaaattttatctt-ttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| ||     |||||||||||||||||| || |||||||    
T  14824242 attaaattttattttaaaaaaaaaataattatccgatatttcccgatac 14824290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 35342453 - 35342486
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||||||    
T  35342453 ctgatacttcccgatacgtatcaggagagtatcc 35342486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 310
Target Start/End: Original strand, 40536307 - 40536384
Alignment:
Q  234 cccgatacgtatccggagagtatccaaatattaaattttatctt-ttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||| | ||||||||  |  |||||||||||| || ||||  ||||||||||||||||||| |||||||    
T  40536307 cccgatacgtatcggaagagtatcagatcattaaattttattttattttttaaataattatccgatacttcccgatac 40536384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 2e-52; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 157 - 314
Target Start/End: Complemental strand, 34901506 - 34901345
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| ||||||||||||||||||    
T  34901506 aacctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggaga 34901407  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  34901406 gtatctaaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 34901345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 12580671 - 12580516
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||||||||| || |||||||  ||||||||||||||||||||||||    |||||||||||||||||||||||||||||||    
T  12580671 tgaagccccgatacttcaaaatagatgatgtaccgtatctcctgcgtatcctgcaccgataactgtctgatacttcccgatacgtatccggagagtatcc 12580572  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| ||| ||||||||| |||||||||||||||||||    
T  12580571 aaatattaaattttatttttttaaaatataattatctgatactttccgatacatcc 12580516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 16384617 - 16384772
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||| |||||||||||||||| |||    ||||||||||||||||||||| |||||||||    
T  16384617 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgagtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatcc 16384716  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  16384717 aaatattaaattttattttttaaaaaaataattatccgatactttccgatacatcc 16384772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 22201455 - 22201300
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||| |||||||||| ||||| ||||||||  ||||||| |||||||||||||||||||| |||    |||||| ||||||||||||||||||||||||    
T  22201455 tgaagtcccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatcc 22201356  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  22201355 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 22201300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 32759373 - 32759524
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||| |||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||| |||||||||||    
T  32759373 tgaagcctcgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 32759472  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  32759473 aaatattaaattttatttttttaaaaaataattatccgatactttccgatac 32759524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 163 - 314
Target Start/End: Original strand, 13422208 - 13422363
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||| |||||||||||||||     ||||||||||||||||||||| ||||||||||||    
T  13422208 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgcctgatacttcccgatacgtatacggagagtatcc 13422307  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| || || |||||||||||||| ||||||||||||||||||    
T  13422308 aaatattaaattttattttgttaaaaaataattatccaatactttccgatacatcc 13422363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 28876689 - 28876528
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| |||||||| | |||||| |||||||||||||||||||| ||    |||||||| |||||||||||| |||||    
T  28876689 acctgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttctcgatacgtatccagagag 28876590  T
Q  254 tatccaaatattaaattttatctttt-ttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||||||| ||||   |||||||||||||||||||||||||||||||||    
T  28876589 tatccaaatattaaattttattttttaaaaaaaataattatccgatactttccgatacatcc 28876528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 157 - 310
Target Start/End: Original strand, 36483429 - 36483586
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| |||||||||||||| |||    
T  36483429 aacctgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccgaaga 36483528  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||||||||| ||||  ||||||||||||||||||| | |||||||    
T  36483529 gtatccaaatattaaattttattttttaaaaaaataattatccgatacgtcccgatac 36483586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 43771827 - 43771667
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||| ||||||||||| ||||| |||||||| |||||||| ||||||||||||||||||||  ||    |||||||| |||||||||||||||||    
T  43771827 acctgtgaaaccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagag 43771728  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||||||| |||   |||||||||||||||||||||| ||||||||||    
T  43771727 tatccaaatattaaattttatttttaaaaaaaataattatccgatactttgcgatacatcc 43771667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 4245940 - 4246091
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||| ||| |||||||||||||| |||||||| |||| ||||||||||||||| |||    ||||||||||||||||||||| |||||||||    
T  4245940 tgaagccccgatgcttcaaaatagatgacgtaccgtatcccctgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtatcc 4246039  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||  ||||||||||||||||||| | |||||||    
T  4246040 aaatattaaattttattttttaaaaaaataattatccgatacatcccgatac 4246091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 163 - 300
Target Start/End: Complemental strand, 2873028 - 2872888
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  2873028 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 2872929  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||| ||||||||| ||||| |||||| ||||||||||||    
T  2872928 aaatatgaaattttat-tttttaaaaaatgattatccgatac 2872888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 157 - 300
Target Start/End: Original strand, 32877431 - 32877578
Alignment:
Q  157 aacctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggaga 252  Q
    ||||| |||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||||||||| |||    ||||||||||||||||||| |||||    
T  32877431 aacctgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggaga 32877530  T
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||||||||| ||||  |||||||||| ||||||||    
T  32877531 gtatccaaatattaaattttattttttaaaaaaataattttccgatac 32877578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 32638974 - 32638833
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||| | ||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||      |||||||||||||||||||||||||||||    
T  32638974 tgaagctctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctg------cccgatacgtatccggagagtatccaaat 32638881  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| ||||  ||||||||||||| |||||||||||||||    
T  32638880 attaaattttattttttaaaaaaataattatctgatactttccgatac 32638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 45217338 - 45217187
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||  |   |||||| |||||||||||||||||||| |||    ||| || ||||||||||||||||||||||||    
T  45217338 tgaagccccgatactttaaaatggatgatatattgtatcccctgcgtatcctgcaccgatacctgtccgatattttccgatacgtatccggagagtatcc 45217239  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||  ||||||||||||||||||| | |||||||    
T  45217238 aaatattaaattttattttttaaaaaaataattatccgatacatcccgatac 45217187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 6028487 - 6028628
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| ||    ||||||| ||||||| |||| |||||||||||    
T  6028487 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccgatactttccgatacatatcgggagagtatcc 6028586  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||| ||||   ||||||||| ||||||||    
T  6028587 aaatattaaattttattttttaagaaaataattttccgatac 6028628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 37668582 - 37668733
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||||||||||| ||||| |||||||| |||||| | ||||||||| |||||| |||     ||||||||||||||||| ||| |||| | |||||    
T  37668582 tgaaaccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcttgcaccaatatctgtctgatacttcccgatacatatacggataatatcc 37668681  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||| ||||||||||||||||||| | |||||||    
T  37668682 aaatattaaattttatttttttaaaaaataattatccgatacgtcccgatac 37668733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 25022125 - 25022266
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||| |||||| ||||| |||||| | |||||||  |||||||||||||||||||| |||    |||||||| |||||||||| |||||||||||    
T  25022125 tgaagccccaatacttcaaaatggatgacataccgtatctcctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcgggagagtatcc 25022224  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||| ||||   ||||||||| ||||||||    
T  25022225 aaatattaaattttattttttaagaaaataattttccgatac 25022266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 170 - 309
Target Start/End: Original strand, 32424928 - 32425071
Alignment:
Q  170 ccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatccaaatatt 265  Q
    ||||||||| ||||| |||||||| ||||||||  |||||||||||||||||||     |||||||||| ||||||||||| | ||||||||| || |||    
T  32424928 ccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgtctgatacttcacgatacgtatcagaagagtatccgaagatt 32425027  T
Q  266 aaattttatcttttttaaaaataattatccgatactttccgata 309  Q
    ||||||||| |||   ||||||||||||||||||||| ||||||    
T  32425028 aaattttatttttaaaaaaaataattatccgatacttcccgata 32425071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 303
Target Start/End: Original strand, 12357889 - 12358023
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||| ||||||| ||||| |||||||| | |||||||||| |||||||||||||||| ||      |||||||||||||| | | |||||||||||    
T  12357889 tgaagcccggatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatct------tcccgatacgtatcagcatagtatccaaat 12357981  T
Q  263 attaaattttatcttttt-taaaaataattatccgatacttt 303  Q
    |||||||||||| |||||  ||||| ||||||||||||||||    
T  12357982 attaaattttatttttttaaaaaaacaattatccgatacttt 12358023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 303
Target Start/End: Original strand, 12359017 - 12359151
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||| ||||||| ||||| |||||||| | |||||||||| |||||||||||||||| ||      |||||||||||||| | | |||||||||||    
T  12359017 tgaagcccggatacttcaaaatggatgacgtac-gtatcctctgtgtatcctgcaccgatatct------tcccgatacgtatcagcatagtatccaaat 12359109  T
Q  263 attaaattttatcttttt-taaaaataattatccgatacttt 303  Q
    |||||||||||| |||||  ||||| ||||||||||||||||    
T  12359110 attaaattttatttttttaaaaaaacaattatccgatacttt 12359151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 312
Target Start/End: Original strand, 27968101 - 27968258
Alignment:
Q  161 tctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggaga--gt 254  Q
    ||||||| |||||||||| ||||||||||||||   |||| | |||| |||||||||||||||     |||||||||||||||||||||| |||||  ||    
T  27968101 tctgaagtcccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcaccgatacctggctgatacttcccgatacgtatcaggagatcgt 27968200  T
Q  255 atccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    |||| || |||||| ||||| ||||  ||||||||||||| |||||||  ||||||||    
T  27968201 atccgaagattaaagtttattttttaaaaaaataattatctgatacttctcgatacat 27968258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 161 - 312
Target Start/End: Original strand, 28025087 - 28025244
Alignment:
Q  161 tctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggaga--gt 254  Q
    ||||||| |||||||||| ||||||||||||||   |||| | |||| |||||||||||||||     |||||||||||||||||||||| |||||  ||    
T  28025087 tctgaagtcccgatacttaaaaatagatgacgtattgtattccctgcatatcctgcaccgatacctggctgatacttcccgatacgtatcaggagatcgt 28025186  T
Q  255 atccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacat 312  Q
    |||| || |||||| ||||| ||||  ||||||||||||| |||||||  ||||||||    
T  28025187 atccgaagattaaagtttattttttaaaaaaataattatctgatacttctcgatacat 28025244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 310
Target Start/End: Complemental strand, 19948112 - 19947964
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaa 260  Q
    |||||| ||||||| ||||| ||||||||  | ||||| |||||||||||||||||||| |||    ||||||||||||||||| | |||||||||||||    
T  19948112 aagccctgatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgctcgatacttcccgatacgtaccgggagagtatccaa 19948013  T
Q  261 atattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||| || ||||| ||||   ||||||||| ||||||  ||||||||||    
T  19948012 atatt-aactttattttttaagaaaataattttccgattatttccgatac 19947964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 37372259 - 37372374
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||| ||||||||| ||||| ||||||||  ||||||  ||||||||||||||| ||||     |||||||||||||||||||||| |||||||||||    
T  37372259 tgaagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcactgatacctgtctgatacttcccgatacgtatcaggagagtatcc 37372358  T
Q  259 aaatattaaattttat 274  Q
     || ||||||||||||    
T  37372359 gaagattaaattttat 37372374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 38388667 - 38388810
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||||||||||| ||||| ||||  ||   ||||||||||||||||||||||||||| |||    ||||||| |||||||| || ||| |||||||    
T  38388667 tgaaaccccgatacttcaaaatggatgctgtattgtatcctctgcgtatcctgcaccgatacctgtccgatacttctcgatacgtgtcaggaaagtatcc 38388766  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
     || |||||||||||| ||||| ||||| |||||||| ||||||    
T  38388767 gaagattaaattttatttttttaaaaaacaattatccaatactt 38388810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 169 - 274
Target Start/End: Original strand, 5539441 - 5539539
Alignment:
Q  169 cccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaatattaaa 268  Q
    |||||||||| ||||| ||||| || | |||||| |||||||||||||||||||| |||      ||||||| |||||||||||||||||||||||||||    
T  5539441 cccgatacttcaaaatggatgatgtactgtatcc-ctgcgtatcctgcaccgatacctg------cccgatatgtatccggagagtatccaaatattaaa 5539533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 27886190 - 27886333
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||| |||||||||| ||||| ||||||||   |||| | |||| ||||||||||||||| |||    ||||||||||||||||||| |||||||||||    
T  27886190 tgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtatcc 27886289  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
     || |||||| ||||| |||   ||||||| ||||| |||||||    
T  27886290 gaagattaaagtttatttttaaaaaaaatagttatctgatactt 27886333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 27944848 - 27944991
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||| |||||||||| ||||| ||||||||   |||| | |||| ||||||||||||||| |||    ||||||||||||||||||| |||||||||||    
T  27944848 tgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtatcc 27944947  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
     || |||||| ||||| |||   ||||||| ||||| |||||||    
T  27944948 gaagattaaagtttatttttaaaaaaaatagttatctgatactt 27944991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 168 - 300
Target Start/End: Complemental strand, 5818424 - 5818288
Alignment:
Q  168 ccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaata 263  Q
    ||||||||||| ||||| ||||||||  ||||||   ||||||||||||||||||| |||    ||| ||||||||| ||||| ||||||||||  || |    
T  5818424 ccccgatacttcaaaatggatgacgtatcgtatcacttgcgtatcctgcaccgatacctgcatgatatttcccgatatgtatcaggagagtatctgaaga 5818325  T
Q  264 ttaaattttatcttttttaaaaataattatccgatac 300  Q
    ||||||||||| |||   ||||||||||||| |||||    
T  5818324 ttaaattttatttttaaaaaaaataattatctgatac 5818288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 310
Target Start/End: Original strand, 29355618 - 29355775
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||| ||||||| ||||| |||||| |  | ||||| ||| |||||||||| ||||| |||    ||||||||||||||||| | ||||||    
T  29355618 acctgtgaagccctgatacttcaaaatggatgacatatcatatcccctgggtatcctgcatcgatagctgcttgatacttcccgatacgtagcaggagag 29355717  T
Q  254 tatccaaatattaaattttatcttttttaaaaa-taattatccgatactttccgatac 310  Q
    ||||| || |||||||||||  ||||  ||||| ||||||  |||||||| |||||||    
T  29355718 tatccgaagattaaattttaatttttaaaaaaagtaattagtcgatacttcccgatac 29355775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 10349310 - 10349388
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    |||||||||| ||||||||||| ||| ||||||  || |||||||||||| ||||| ||||| |||||||| |||||||    
T  10349310 ctgatacttctcgatacgtatcaggaaagtatctgaagattaaattttatttttttaaaaaacaattatccaatacttt 10349388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 163 - 303
Target Start/End: Original strand, 23265649 - 23265788
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||  ||||||||||||||| ||| | |||||||  |||||||| |||||| |||| |||    ||| ||||||||||||||| |||||||||||    
T  23265649 tgaagcccaaatactttaaaatagacgacataccgtatctcctgcgtattctgcactgatatctgtccaatatttcccgatacgtatcaggagagtatcc 23265748  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
     || ||||| ||||   ||||||  ||| ||||||||||||||||    
T  23265749 gaagattaattttt---tttttt--aaacaattatccgatacttt 23265788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 279
Target Start/End: Original strand, 42949196 - 42949250
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatctttt 279  Q
    |||||||||  ||||||||||| ||||||||||||||||||||||||||| ||||    
T  42949196 ctgatacttttcgatacgtatcgggagagtatccaaatattaaattttatttttt 42949250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 19436274 - 19436339
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactga 228  Q
    |||||| ||||||||| ||||| |||||||| ||||||||  ||||||||||||||||||| ||||    
T  19436274 tgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctga 19436339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 228
Target Start/End: Original strand, 19572423 - 19572488
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactga 228  Q
    |||||| ||||||||| ||||| |||||||| ||||||||  ||||||||||||||||||| ||||    
T  19572423 tgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctga 19572488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 253 - 310
Target Start/End: Original strand, 40412508 - 40412565
Alignment:
Q  253 gtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||| ||||||||||||||| ||||  |||||||||||||||||||||| ||||||    
T  40412508 gtatccgaatattaaattttattttttaaaaaaataattatccgatacttttcgatac 40412565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 303
Target Start/End: Original strand, 17702563 - 17702639
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    |||||| | ||||||||||| ||||||||||  || |||||||||||| |||| ||||||||||| | |||||||||    
T  17702563 gatactcctcgatacgtatcgggagagtatctgaaaattaaattttattttttataaaaataattgttcgatacttt 17702639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 8171278 - 8171202
Alignment:
Q  237 gatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||| | ||||||||| ||||||||||||||| ||    |||||||||||| ||||| ||||||||||||||    
T  8171278 gatacgtatc-gtagagtatccgaatattaaattttattttaaaaaaaaataattattcgataatttccgatacatcc 8171202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 225 - 310
Target Start/End: Original strand, 20182439 - 20182524
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||  ||||||||||| | ||||||||  || |||||||||||  ||||  ||||||||||| ||||||||| |||||||    
T  20182439 ctgatacttttcgatacgtatcagtagagtatctgaagattaaattttaatttttaaaaaaataattaaccgatacttcccgatac 20182524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 310
Target Start/End: Complemental strand, 24100244 - 24100160
Alignment:
Q  226 tgatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||| || |||||| ||||| ||||||||||| || |||||||||||  ||||| |||||||||||  | |||||| |||||||    
T  24100244 tgatattttccgatatgtatcaggagagtatccgaagattaaattttaattttttaaaaaataattagtcaatacttcccgatac 24100160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 302
Target Start/End: Original strand, 32683 - 32812
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaatat 264  Q
    |||||||||||||||||||| | ||||||  | ||||||||| |||||||||| ||||| |||      |||||||| | || |    |||||| || ||    
T  32683 aagccccgatactttaaaatggttgacgtatcatatcctctgtgtatcctgcatcgatatctg------cccgatactt-tctgatacgtatccgaagat 32775  T
Q  265 taaattttatcttttttaaaaataattatccgatactt 302  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  32776 taaattttat-ttttttaaaaataattatctgatactt 32812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 272
Target Start/End: Complemental strand, 30804795 - 30804750
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaatttt 272  Q
    ||||||| |||||||||||| ||||||||||| |||||||| ||||    
T  30804795 gatactttccgatacgtatcaggagagtatccgaatattaattttt 30804750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 40412435 - 40412492
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccg 220  Q
    ||||||||| |||||| ||||| ||||| ||  ||||||| |||||||||||||||||    
T  40412435 tgaagccccaatacttcaaaatggatgatgtatcgtatcccctgcgtatcctgcaccg 40412492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 3e-51; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 163 - 314
Target Start/End: Complemental strand, 1036944 - 1036789
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    |||||| |||||||||||||||||||||||     
T  1036944 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 1036845  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  1036844 aaatattaaattttatttttttaaaaaataattatccgatactttccgatacatcc 1036789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 8356958 - 8357109
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||| || ||||||| ||||| |||||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||||| |||||||||    
T  8356958 tgaagtcctgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatccgaagagtatcc 8357057  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||||||||    
T  8357058 aaatattaaattttattttttaaaaaaataattatccgatactttccgatac 8357109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 173 - 314
Target Start/End: Complemental strand, 31195977 - 31195832
Alignment:
Q  173 atactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaaatattaaa 268  Q
    |||||| ||||| ||||||||  ||||||| |||||||||||||||||||| |||    ||||||||||||||||||| |||||||||||||||||||||    
T  31195977 atacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatccaaatattaaa 31195878  T
Q  269 ttttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    |||||| ||||  |||||||||||||||||||||||||||||||||    
T  31195877 ttttattttttaaaaaaataattatccgatactttccgatacatcc 31195832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 163 - 300
Target Start/End: Original strand, 3212477 - 3212618
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  ||||| |  || |||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  3212477 tgaagccccgatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatatctgcccgatacttcccgatacgtatccggagagtatcc 3212576  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||||||| |||||  ||||||||||||||||||    
T  3212577 aaatattaaattttatttttttataaaataattatccgatac 3212618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 7188897 - 7188746
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagta 255  Q
    ||||||||||||||||||| ||||| ||||   | |||||||| ||||||||||||||||||||     ||||||||||| |||||||||||||||||||    
T  7188897 ctctgaagccccgatacttcaaaatggatg---taccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcctgatacgtatccggagagta 7188801  T
Q  256 tccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||||||||||||||| |||   ||||||||||||||||||| | |||||||    
T  7188800 tccaaatattaaattttatttttaaaaaaaataattatccgatacatcccgatac 7188746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 32130777 - 32130626
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    ||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||| |||| |||    ||| ||||||||||||||| |||||||||||    
T  32130777 tgaagccccgatactttaaaatgaatgacgtaccgtatcccctgcgtatcctgcactgatacctgttcgatatttcccgatacgtatcaggagagtatcc 32130678  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| ||||   ||||||||| |||||||| | |||||||    
T  32130677 aaatattaaattttattttttaagaaaataattttccgatacgtcccgatac 32130626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 19128153 - 19128304
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||| || |||||||||||| | ||||||  ||||||| ||| |||||||||||| ||| | |    |||||| |||||||||||| | |||||||||    
T  19128153 tgaagctccaatactttaaaatggttgacgtatcgtatcccctgtgtatcctgcaccaatacccgcccgatactttccgatacgtatcagaagagtatcc 19128252  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  19128253 gaagattaaattttattttttttaaaaataattatccgatacttcccgatac 19128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 26327155 - 26327305
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  ||||||  ||| |||||||||||||||| |||    ||||||||||||||||||  | |||||||||    
T  26327155 tgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctgcccgatacttcccgatacgtataag-agagtatcc 26327253  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || |||||||||||| |||   ||||||||||||||||||||| |||||||    
T  26327254 gaagattaaattttatttttaaaaaaaataattatccgatacttcccgatac 26327305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 163 - 274
Target Start/End: Original strand, 27083985 - 27084100
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||||||  ||||||| |||||||||||||||||||| |||    ||||||||| ||||||||  |||||||||||    
T  27083985 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgctcaatacttcccaatacgtataaggagagtatcc 27084084  T
Q  259 aaatattaaattttat 274  Q
    ||| ||||||||||||    
T  27084085 aaagattaaattttat 27084100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 172 - 310
Target Start/End: Original strand, 32017986 - 32018127
Alignment:
Q  172 gatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatccaaatattaa 267  Q
    ||||||| ||||| ||||||||  ||||||| |||||||||||||||||||| ||    ||||||| || ||||||||||| |||||||   ||||||||    
T  32017986 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatatctgcccgatactttcctatacgtatccgtagagtatatgaatattaa 32018085  T
Q  268 attttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||||| |||||||||||||| ||| ||||||||||| ||||    
T  32018086 attttat-ttttttaaaaataactattcgatactttccaatac 32018127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 234303 - 234459
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagta 255  Q
    ||||||||||||||||||| ||||| | ||||||  ||||||  |||||||||||||||||||| ||    ||||||| |||||||||||| | ||||||    
T  234303 ctctgaagccccgatacttcaaaatggttgacgtatcgtatctcctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagta 234402  T
Q  256 tccaaatattaa---attttatcttttttaaaaataattatccgatactttccgata 309  Q
    ||| || |||||    |||| | |||||| |||||||||||||||||||| ||||||    
T  234403 tccgaagattaactttttttttttttttttaaaataattatccgatacttcccgata 234459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 310
Target Start/End: Original strand, 31079609 - 31079753
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatcca 259  Q
    ||||||||| ||||||||||||||| ||||||||   |||||| ||||||||||||||||       |||||||| ||||| ||||| ||| ||||||      
T  31079609 ctctgaagctccgatactttaaaatggatgacgtattgtatcccctgcgtatcctgcacc-------gatacttctcgataagtatcaggatagtatctt 31079701  T
Q  260 aatattaaattttatctt-ttttaaaaataattatccgatactttccgatac 310  Q
    || |||||||||||| || ||||||||||||||||| ||||||| |||||||    
T  31079702 aagattaaattttattttattttaaaaataattatctgatacttcccgatac 31079753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 3299141 - 3299277
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataac----tgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||| ||||||||||| || ||||||||||||| ||||||||||||||| |    ||||| || |||||||||||| |||||||||      
T  3299141 tgaagccctgatacttcaaaatagatgatgtaccgtatcctctgcatatcctgcaccgatacctgcatgatattttccgatacgtatctggagagtattt 3299240  T
Q  259 aaatattaaattttatcttttttaaaaataattatcc 295  Q
    ||| |||||||||||| || ||  ||| |||||||||    
T  3299241 aaagattaaattttattttattataaagtaattatcc 3299277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 6708159 - 6708008
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||| |   |||||| ||| ||||| ||||||||||     ||||||||| || ||| ||||| |||||||||||    
T  6708159 tgaagccccgatactttaaaatggatgacatattgtatcccctgtgtatcatgcaccgataccttcctgatactttccaatatgtatcaggagagtatcc 6708060  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
     || ||||||| |||| ||    ||||||||||||||||||||| |||||||    
T  6708059 gaagattaaatattattttaaaaaaaaataattatccgatacttcccgatac 6708008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 302
Target Start/End: Original strand, 11105286 - 11105429
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatcc 258  Q
    |||||| | ||||||||||||| |||||||| |||||| || ||||||||||||| |||||  |    ||||||| | |||||||||| | ||| ||| |    
T  11105286 tgaagctctgatactttaaaatggatgacgtaccgtattctttgcgtatcctgcatcgatacatgttcgatactttctgatacgtatcagaagaatattc 11105385  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactt 302  Q
     || |||||||||||| ||||| |||||||||||| ||||||||    
T  11105386 gaagattaaattttatttttttaaaaaataattattcgatactt 11105429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 163 - 297
Target Start/End: Complemental strand, 25834614 - 25834476
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataa----ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||| ||||||||||| ||| | ||||||||  |||||||  |||||||||||||| ||||     |||||| ||| ||||||||||| ||| |||||||    
T  25834614 tgaaaccccgatacttcaaattggatgacgtatcgtatcccgtgcgtatcctgcactgatacatgcctgatatttctcgatacgtatcaggacagtatcc 25834515  T
Q  259 aaatattaaattttatcttttttaaaaataattatccga 297  Q
    |||||||||||||||| ||||   ||||||||| |||||    
T  25834514 aaatattaaattttattttttaataaaataattttccga 25834476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 163 - 274
Target Start/End: Complemental strand, 10894690 - 10894586
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||| ||||||| ||||| |||||||| |||||||| | ||||||| |||||||||| |||      || |||||||||| ||||||||||||||     
T  10894690 tgaagccctgatacttcaaaatggatgacgtaccgtatcccc-gcgtatcatgcaccgatacctg------cctgatacgtatcaggagagtatccaaag 10894598  T
Q  263 attaaattttat 274  Q
    ||||||||||||    
T  10894597 attaaattttat 10894586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 310
Target Start/End: Complemental strand, 13607908 - 13607752
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||| ||| ||||||| ||||| ||||||||  |||||||||||| |||||||||| |||| |||    ||| || | |||||||||| ||||||    
T  13607908 acctatgaatccctgatacttcaaaatggatgacgtatcgtatcctctgcatatcctgcactgatacctgcctaataatttctgatacgtatcaggagag 13607809  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||| || ||||| |||  | | ||||| ||||||||||  ||||||| |||||||    
T  13607808 tatccgaagattaactttattttattttataaataattatatgatacttcccgatac 13607752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 29892966 - 29893026
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata 223  Q
    |||||||| ||||||||||||| ||||| || | |||||| |||||||||||||| |||||    
T  29892966 tgaagcccagatactttaaaatggatgatgtactgtatcccctgcgtatcctgcatcgata 29893026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 310
Target Start/End: Complemental strand, 31741277 - 31741135
Alignment:
Q  160 ctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatcca 259  Q
    ||||||||  ||||||||| ||||| ||||||||  ||||||| || || ||| |||| ||||| |||      ||||||||||||| ||||||| |  |    
T  31741277 ctctgaagttccgatacttcaaaatggatgacgtatcgtatcccctacgcatcatgcatcgatacctg------cccgatacgtatcgggagagtct--a 31741186  T
Q  260 aatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    ||||| ||||||||| ||||   || |||||| ||||||||||||||||||    
T  31741185 aatatcaaattttattttttaagaagataattttccgatactttccgatac 31741135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 7255056 - 7255089
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||||||    
T  7255056 ctgatacttcccgatacgtatcaggagagtatcc 7255089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 31079737 - 31079770
Alignment:
Q  225 ctgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||||||||| |||||||||||    
T  31079737 ctgatacttcccgatacgtatcaggagagtatcc 31079770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 8210 - 8059
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatcc 258  Q
    |||||||||||||||| ||||| ||||| || |||||||| |||||||||||||||||||| |||    |||||||||||||||||||||||||||||||    
T  8210 tgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 8111  T
Q  259 aaatattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||||| |||   ||||||||||||| |||||||||||||||    
T  8110 aaatattaaattttatttttaaaaaaaataattatctgatactttccgatac 8059  T

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Target: scaffold0250 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 165 - 310
Target Start/End: Original strand, 5514 - 5663
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagagtatccaa 260  Q
    |||||||||||||| ||||| || ||||| |||||||| |||||||||||||||||||| |||    ||||||||||||||||||| |||||||||||||    
T  5514 aagccccgatacttcaaaatggacgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatccaa 5613  T
Q  261 atattaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||||| ||||   ||||||||| ||||||||||||||||||    
T  5614 atattaaattttattttttaagaaaataattttccgatactttccgatac 5663  T

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Target: scaffold0060 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 158 - 314
Target Start/End: Complemental strand, 30567 - 30407
Alignment:
Q  158 acctctgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactg----atacttcccgatacgtatccggagag 253  Q
    |||| |||||||||||||||| ||||| ||| |||| ||||||   ||||||||||| |||||||| |||    |||||||| |||||||||||||||||    
T  30567 acctgtgaagccccgatacttcaaaatggataacgtaccgtatttcctgcgtatcctacaccgatacctgcccgatacttcctgatacgtatccggagag 30468  T
Q  254 tatccaaatattaaattttatcttttttaaaaataattatccgatactttccgatacatcc 314  Q
    ||||||||||||||||||||| ||    |||||||||||||||||||||||||||||||||    
T  30467 tatccaaatattaaattttattttaaaaaaaaataattatccgatactttccgatacatcc 30407  T

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Target: scaffold0177 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 163 - 300
Target Start/End: Complemental strand, 25648 - 25518
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| |||||||  |||||||| |||||||| |||||||||||       ||||||||||||||||||||||||||||||||    
T  25648 tgaagccccgatacttcaaaatggatgacgcaccgtatcccctgcgtattctgcaccgata-------cttcccgatacgtatccggagagtatccaaat 25556  T
Q  263 attaaattttatcttttttaaaaataattatccgatac 300  Q
    |||||||||||| ||||| ||||||||||||| |||||    
T  25555 attaaattttatttttttaaaaaataattatctgatac 25518  T

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Target: scaffold0112 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 310
Target Start/End: Complemental strand, 42183 - 42043
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| |||||||| | |||||| ||||||||||||||||||||       ||||||||||||||||  ||||||||||||||    
T  42183 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgata-------cttcccgatacgtatctagagagtatccaaat 42091  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||||| ||||  ||||||||||||||||||| |||| ||||    
T  42090 attaaattttattttttaaaaaaataattatccgatacgttcccatac 42043  T

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Target: scaffold0037 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 163 - 299
Target Start/End: Complemental strand, 27899 - 27769
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| |||||||| |||||||| |||| ||||||||||||||| |||       |||||||||||||| |||||||||||||    
T  27899 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgt------ccgatacgtatccgcagagtatccaaat 27806  T
Q  263 attaaattttatcttttttaaaaataattatccgata 299  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  27805 attaaattttatttttttaaaaaataattatccgata 27769  T

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Target: scaffold0285 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 165 - 298
Target Start/End: Original strand, 13252 - 13388
Alignment:
Q  165 aagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataact----gatacttcccgatacgtatccggagagtatccaa 260  Q
    |||| ||||||||| ||||| ||||||||  ||||||  |||||||||||||||||||| ||    ||||||||||||||||||||  |||||||||  |    
T  13252 aagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcaccgatacctgtcagatacttcccgatacgtatcaagagagtatctga 13351  T
Q  261 atattaaattttatcttttttaaaaataattatccgat 298  Q
    | |||||||||||| |||||||||||||||||||||||    
T  13352 agattaaattttat-ttttttaaaaataattatccgat 13388  T

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Target: scaffold0406 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 163 - 310
Target Start/End: Original strand, 13866 - 14003
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    ||||| |||||||||| ||||| |||||||| | ||||| |||||||||||||||| | || ||       |||||||||||||||||||||||||||||    
T  13866 tgaagtcccgatacttcaaaatggatgacgtactgtatcatctgcgtatcctgcactgttaccta------cccgatacgtatccggagagtatccaaat 13959  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgatac 310  Q
    |||||||||    ||||||  ||||||||||| |||||||||||||||    
T  13960 attaaattt----ttttttttaaataattatcagatactttccgatac 14003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 311
Target Start/End: Complemental strand, 44708 - 44577
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgataactgatacttcccgatacgtatccggagagtatccaaat 262  Q
    |||||||||||||||| ||||| |||||||| |||||||| ||||||||||||||||                 ||||||||||||||||||||||||||    
T  44708 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcacc-----------------gatacgtatccggagagtatccaaat 44626  T
Q  263 attaaattttatcttttttaaaaataattatccgatactttccgataca 311  Q
    |||||||||| |  |||| ||||||||||||||||||| | ||||||||    
T  44625 attaaatttttttcttttaaaaaataattatccgatacatcccgataca 44577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 163 - 291
Target Start/End: Original strand, 10600 - 10732
Alignment:
Q  163 tgaagccccgatactttaaaatagatgacgtcccgtatcctctgcgtatcctgcaccgata----actgatacttcccgatacgtatccggagagtatcc 258  Q
    |||||||| ||||||||||||| ||||| || || ||||| ||||||||| ||||||||||     | |||||||| ||||||||||| ||||||||||     
T  10600 tgaagcccagatactttaaaatggatgatgtaccatatcccctgcgtatcatgcaccgatacttgcccgatacttctcgatacgtatcaggagagtatca 10699  T
Q  259 aaatattaaattttatcttttttaaaaataatt 291  Q
     || ||||||| |||  ||||||||||| ||||    
T  10700 gaagattaaatgttactttttttaaaaacaatt 10732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 303
Target Start/End: Complemental strand, 181177 - 181101
Alignment:
Q  227 gatacttcccgatacgtatccggagagtatccaaatattaaattttatcttttttaaaaataattatccgatacttt 303  Q
    ||||||||| |||||||||| ||||||| | | || |||||||||||| | |||| |||| ||| ||||||||||||    
T  181177 gatacttcctgatacgtatcaggagagttttcgaagattaaattttatttatttttaaaacaatcatccgatacttt 181101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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