View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19185_high_24 (Length: 267)
Name: NF19185_high_24
Description: NF19185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19185_high_24 |
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Alignment Details
Target: chr2 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 7423004 - 7422863
Alignment:
| Q |
18 |
tggtggatatgcatttgatttttggatccttgcaaacacccaaggcccactgttctacccttacgtaatgattgaatgatggtgacggtggtgatggcga |
117 |
Q |
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| T |
7423004 |
tggtggatatgcatttgatttttggatccttgcaaacacccaaggcccactgttctaccctt-cgtaatgattgaatgatggtgacggtggtgatggcga |
7422906 |
T |
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| Q |
118 |
tggcgatggtgctagtgctgctaatattgccaatgtcgaagtc |
160 |
Q |
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| T |
7422905 |
tggtgatggtgctagtgctgctaatattgccaatgtcgaagtc |
7422863 |
T |
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