View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19185_low_18 (Length: 301)
Name: NF19185_low_18
Description: NF19185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19185_low_18 |
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Alignment Details
Target: chr1 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 37 - 280
Target Start/End: Complemental strand, 25295357 - 25295112
Alignment:
| Q |
37 |
tttccacacaattgcaatttatcccagaattattatcatccataaactaatcatcaaacttccaaaagtaaaattcaccaaggtagtcccttttggatac |
136 |
Q |
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| T |
25295357 |
tttccacacaattgcaatttatcccagaattattatcatccataaactaatcatcaaacttccgaaagcaaaattcactaagttggtacctttcgtatac |
25295258 |
T |
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| Q |
137 |
atggttttagaaacgaaagaactaaataaaaattcaaataataatcagaattttcctacacattgtatatgtagtatttgtctacatgttcttttcagat |
236 |
Q |
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| T |
25295257 |
ttagttttagaaatgaaagaactaaataaaaattcaaataataatcggaattttcctacacattgtatatgtagaatttgtctacatgttcttttcagat |
25295158 |
T |
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| Q |
237 |
agcttattttca--tataccgttagcctatgccttatgcagagcgt |
280 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
25295157 |
agcttattttcatatataccgttagcctatgccttatgcagagcgt |
25295112 |
T |
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