View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19189_high_20 (Length: 327)
Name: NF19189_high_20
Description: NF19189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19189_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 20 - 316
Target Start/End: Complemental strand, 34269974 - 34269678
Alignment:
| Q |
20 |
accatatagtttgaaagctacaaattttaattaattaagctcacaaaattttattgggaccattaatttccattcacaattggcacaaaaactgattttt |
119 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
34269974 |
accatatagtttgaaagctacaaattttaattaattaagctcacaaaattttattgggaccattaatttccattcacaaatggcacaaaaactgattttt |
34269875 |
T |
|
| Q |
120 |
caagataggcattggccatatatacaacaatatagttagacgttgacctttgacaatagcaaaacagccaaatccaaattatcattgtactattgtatac |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34269874 |
caagataggcattggccatatatacaacaatatagttagacgttgacctttgacaatagcaaaacagccaaatccaaattatcattgtactattgtatac |
34269775 |
T |
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| Q |
220 |
acataagttaagaatgataagcatatagatagatactagtaacttctatttcagaatcagtatctatatgtgtagctgagtgtgtatgtatgttctt |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34269774 |
acataagttaagaatgataagcatatagatagatactagtaacttctatttcagaatcagtatctatatgtgtagctgagtgtgtatgtatgttctt |
34269678 |
T |
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