View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19189_high_48 (Length: 237)
Name: NF19189_high_48
Description: NF19189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19189_high_48 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 48769410 - 48769190
Alignment:
| Q |
1 |
cgttctctgccaccgctaaagaatatttttgaaggttttccaattcgcaaacctttggttggctaagaccagaataaatgcttcatcctcctatttgttg |
100 |
Q |
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| T |
48769410 |
cgttctctgccaccgctaaagaatatttttgaaggttttccagttcgcaaacctttggttggctaagaccagaataaatgcttcatcctcctatttgttg |
48769311 |
T |
|
| Q |
101 |
ttatttttgaacctccatttattccatataggaataattgtttagtctattagtgtttctttgtttggcctgagaaattaactgcgtaagagttatttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
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| T |
48769310 |
ttatttttgaacctccatttattccatataggaataattgtttagtctattagtgtttctttgtttggcctgagaaattaaccgtgtaagagttatttca |
48769211 |
T |
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| Q |
201 |
tattggttatgcctatatata |
221 |
Q |
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||||| ||||||||||||||| |
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| T |
48769210 |
tattgtttatgcctatatata |
48769190 |
T |
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