View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19189_low_46 (Length: 246)
Name: NF19189_low_46
Description: NF19189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19189_low_46 |
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Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 4756850 - 4756638
Alignment:
| Q |
19 |
ctaaatgtttcacagcactatcctcaatgagaccaatataagttgacaatgcttcgtcaccatttatgggagaagtgattaaacgtctcaaacgtttgtg |
118 |
Q |
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| T |
4756850 |
ctaaatgtttcacagcactatcctcaatgagactaatataagttgacaatgcttcgtcaccatttatgggagaagtgattaaacgtctcaaacgtttgtg |
4756751 |
T |
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| Q |
119 |
ttcagaatttgagattccatggaatgatcttttacctgtaaggaccatggttgaatgagggtatccaaccttgagattctcttcgtcggttagaacctta |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4756750 |
ttcagaatttgagattccatggaatgatcttttacctgtaaggaccatggttgaatgagggtatccaaccttgagattctcttcgtcggttagaacctta |
4756651 |
T |
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| Q |
219 |
cgacatgtctctg |
231 |
Q |
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||||||||||||| |
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| T |
4756650 |
cgacatgtctctg |
4756638 |
T |
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