View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19189_low_47 (Length: 245)
Name: NF19189_low_47
Description: NF19189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19189_low_47 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 11 - 245
Target Start/End: Complemental strand, 3089940 - 3089706
Alignment:
| Q |
11 |
aatcaagcagccattaacaattaagaagaaatggagttagaccctatgatcagtggttattgacaaattcaaacaactaattttctggtcactgtgttga |
110 |
Q |
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| T |
3089940 |
aatcaagcaggcattaacaattaagaagaaatggagttagaccctatgatcaatggttattgacaaattcaaacaactaattttctggtcactgtgttga |
3089841 |
T |
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| Q |
111 |
tgagtttgcttaagtagctgctacaaatccttcttcagagtctccaaacacttggttcaaaatcatggctaatcgaattccgccttgagcaattcgtttc |
210 |
Q |
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| T |
3089840 |
tgagtttgcttaagtagctgctacaaatccttcttcagagtctccaaacacttggttcaaaatcatggctaatcgaattccaccttgagcaattcgcttc |
3089741 |
T |
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| Q |
211 |
atgacatatggcatccttgagtcaaagtatttttc |
245 |
Q |
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| T |
3089740 |
atgacatatggcatccttgagtcaaagtatttttc |
3089706 |
T |
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