View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1918_high_9 (Length: 482)

Name: NF1918_high_9
Description: NF1918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1918_high_9
NF1918_high_9
[»] chr3 (32 HSPs)
chr3 (9-423)||(19767898-19768312)
chr3 (216-353)||(45456360-45456497)
chr3 (27-187)||(29199652-29199809)
chr3 (372-482)||(17593537-17593647)
chr3 (371-474)||(17601544-17601647)
chr3 (371-461)||(10813189-10813280)
chr3 (371-461)||(15417671-15417761)
chr3 (29-169)||(12572321-12572461)
chr3 (29-169)||(13548785-13548925)
chr3 (373-461)||(10816085-10816174)
chr3 (373-456)||(8368442-8368526)
chr3 (373-455)||(10777049-10777131)
chr3 (372-417)||(38700029-38700074)
chr3 (371-429)||(26900791-26900850)
chr3 (371-452)||(94735-94816)
chr3 (373-429)||(18556524-18556581)
chr3 (373-429)||(26907395-26907452)
chr3 (371-419)||(8854288-8854336)
chr3 (373-413)||(16091696-16091736)
chr3 (371-433)||(103606-103668)
chr3 (371-429)||(10497496-10497554)
chr3 (373-482)||(14789886-14789996)
chr3 (373-426)||(51199114-51199168)
chr3 (373-413)||(16082520-16082560)
chr3 (373-419)||(8857126-8857172)
chr3 (368-418)||(11134248-11134298)
chr3 (403-461)||(16082559-16082617)
chr3 (403-461)||(16091735-16091793)
chr3 (368-418)||(19777526-19777576)
chr3 (371-400)||(8854477-8854506)
chr3 (373-418)||(19808627-19808672)
chr3 (373-429)||(10496591-10496647)
[»] chr6 (25 HSPs)
chr6 (9-373)||(22082640-22083005)
chr6 (371-482)||(17997010-17997121)
chr6 (371-461)||(13727856-13727946)
chr6 (373-461)||(25969985-25970073)
chr6 (373-461)||(25974425-25974513)
chr6 (377-461)||(19573846-19573930)
chr6 (371-461)||(20090656-20090746)
chr6 (371-429)||(19011866-19011925)
chr6 (371-421)||(16688412-16688462)
chr6 (371-429)||(8667946-8668005)
chr6 (368-438)||(22467389-22467460)
chr6 (373-433)||(19008725-19008786)
chr6 (372-413)||(19577521-19577562)
chr6 (371-433)||(18929623-18929686)
chr6 (371-429)||(19019497-19019556)
chr6 (379-421)||(16666142-16666184)
chr6 (373-421)||(8649918-8649966)
chr6 (373-413)||(11225837-11225877)
chr6 (371-418)||(4279752-4279799)
chr6 (372-429)||(7433232-7433290)
chr6 (403-461)||(11225876-11225934)
chr6 (403-461)||(11231198-11231256)
chr6 (371-421)||(11694578-11694628)
chr6 (373-418)||(4283034-4283079)
chr6 (377-418)||(23607245-23607286)
[»] chr4 (11 HSPs)
chr4 (18-369)||(37616984-37617331)
chr4 (371-461)||(27788906-27788996)
chr4 (374-482)||(23882218-23882326)
chr4 (370-458)||(23878566-23878654)
chr4 (371-456)||(10757099-10757185)
chr4 (371-456)||(10970270-10970356)
chr4 (373-456)||(10754824-10754908)
chr4 (373-456)||(10968593-10968677)
chr4 (385-429)||(53993015-53993059)
chr4 (385-429)||(13563547-13563591)
chr4 (373-421)||(29724941-29724989)
[»] chr5 (13 HSPs)
chr5 (216-372)||(40164751-40164908)
chr5 (373-461)||(40933064-40933152)
chr5 (371-461)||(40936457-40936547)
chr5 (371-456)||(26857627-26857713)
chr5 (373-456)||(26863860-26863944)
chr5 (29-187)||(4351620-4351779)
chr5 (373-428)||(19049912-19049967)
chr5 (371-461)||(32965631-32965721)
chr5 (371-421)||(38840531-38840581)
chr5 (371-438)||(8460024-8460091)
chr5 (373-421)||(38836614-38836662)
chr5 (373-427)||(20817269-20817323)
chr5 (371-405)||(38840360-38840394)
[»] chr1 (19 HSPs)
chr1 (216-353)||(6921612-6921749)
chr1 (216-353)||(38238129-38238266)
chr1 (370-474)||(18433046-18433150)
chr1 (371-461)||(20514226-20514316)
chr1 (371-455)||(19751601-19751685)
chr1 (372-455)||(19749376-19749459)
chr1 (30-108)||(51389655-51389733)
chr1 (371-420)||(20435457-20435506)
chr1 (373-421)||(15158292-15158340)
chr1 (373-413)||(20442358-20442398)
chr1 (371-418)||(15142869-15142916)
chr1 (371-456)||(12020415-12020500)
chr1 (371-421)||(24277055-24277104)
chr1 (372-452)||(24281136-24281216)
chr1 (373-433)||(36910684-36910744)
chr1 (403-461)||(20442397-20442455)
chr1 (388-429)||(5505409-5505450)
chr1 (373-421)||(555660-555708)
chr1 (371-407)||(15154589-15154625)
[»] chr2 (14 HSPs)
chr2 (216-365)||(7827613-7827763)
chr2 (371-474)||(23696377-23696480)
chr2 (371-461)||(23692590-23692680)
chr2 (373-482)||(3071468-3071577)
chr2 (371-429)||(5771732-5771791)
chr2 (371-429)||(26120826-26120885)
chr2 (371-429)||(26126288-26126347)
chr2 (373-438)||(29603987-29604053)
chr2 (371-429)||(7311088-7311147)
chr2 (371-460)||(4876642-4876731)
chr2 (373-429)||(45278810-45278867)
chr2 (373-429)||(45286109-45286166)
chr2 (377-421)||(17932932-17932976)
chr2 (371-429)||(30558584-30558642)
[»] chr7 (13 HSPs)
chr7 (371-482)||(11100004-11100115)
chr7 (372-461)||(44356862-44356951)
chr7 (371-431)||(43173639-43173699)
chr7 (371-456)||(23522469-23522555)
chr7 (373-452)||(23532704-23532784)
chr7 (371-456)||(11544588-11544673)
chr7 (373-413)||(44359984-44360024)
chr7 (372-421)||(15942444-15942492)
chr7 (371-456)||(11527184-11527269)
chr7 (369-421)||(357655-357707)
chr7 (371-421)||(362384-362434)
chr7 (403-461)||(44360023-44360081)
chr7 (385-429)||(9697170-9697214)
[»] chr8 (22 HSPs)
chr8 (371-482)||(21938467-21938578)
chr8 (373-474)||(21935959-21936060)
chr8 (373-461)||(14366000-14366088)
chr8 (372-461)||(20135120-20135209)
chr8 (371-455)||(21408226-21408311)
chr8 (371-455)||(21802718-21802803)
chr8 (371-455)||(21834679-21834764)
chr8 (373-429)||(14673223-14673280)
chr8 (373-458)||(31708764-31708849)
chr8 (371-421)||(36281514-36281564)
chr8 (373-429)||(3299960-3300017)
chr8 (371-460)||(31710982-31711071)
chr8 (373-413)||(14369580-14369620)
chr8 (373-413)||(14370131-14370171)
chr8 (373-413)||(20132044-20132084)
chr8 (371-413)||(14676429-14676471)
chr8 (371-429)||(3303024-3303083)
chr8 (373-460)||(16907132-16907219)
chr8 (9-109)||(770337-770434)
chr8 (403-461)||(14369619-14369677)
chr8 (403-461)||(14370170-14370228)
chr8 (371-405)||(36281701-36281735)
[»] scaffold0037 (1 HSPs)
scaffold0037 (371-474)||(20711-20814)
[»] scaffold0139 (1 HSPs)
scaffold0139 (371-461)||(3086-3176)
[»] scaffold0071 (1 HSPs)
scaffold0071 (371-461)||(44477-44567)
[»] scaffold0123 (1 HSPs)
scaffold0123 (373-461)||(11060-11149)
[»] scaffold0320 (1 HSPs)
scaffold0320 (373-461)||(11884-11972)
[»] scaffold0179 (2 HSPs)
scaffold0179 (368-461)||(27349-27442)
scaffold0179 (373-461)||(24705-24793)
[»] scaffold0167 (1 HSPs)
scaffold0167 (372-461)||(10638-10727)
[»] scaffold0023 (3 HSPs)
scaffold0023 (372-461)||(146536-146625)
scaffold0023 (373-413)||(149735-149775)
scaffold0023 (403-461)||(149774-149832)
[»] scaffold0130 (2 HSPs)
scaffold0130 (364-429)||(19195-19261)
scaffold0130 (382-429)||(15196-15244)
[»] scaffold0202 (2 HSPs)
scaffold0202 (371-429)||(10587-10646)
scaffold0202 (373-429)||(14074-14131)
[»] scaffold0001 (1 HSPs)
scaffold0001 (373-420)||(150975-151022)
[»] scaffold0074 (1 HSPs)
scaffold0074 (373-418)||(56359-56404)
[»] scaffold0018 (1 HSPs)
scaffold0018 (372-460)||(194454-194543)
[»] scaffold1505 (1 HSPs)
scaffold1505 (373-421)||(636-684)
[»] scaffold0878 (2 HSPs)
scaffold0878 (371-460)||(4100-4191)
scaffold0878 (371-415)||(1688-1732)
[»] scaffold0208 (1 HSPs)
scaffold0208 (370-421)||(1738-1788)
[»] scaffold0443 (1 HSPs)
scaffold0443 (373-413)||(6522-6562)
[»] scaffold0369 (1 HSPs)
scaffold0369 (371-415)||(7409-7453)
[»] scaffold0045 (1 HSPs)
scaffold0045 (373-413)||(78529-78569)
[»] scaffold2018 (1 HSPs)
scaffold2018 (371-418)||(930-977)
[»] scaffold0009 (1 HSPs)
scaffold0009 (368-400)||(72347-72379)


Alignment Details
Target: chr3 (Bit Score: 366; Significance: 0; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 366; E-Value: 0
Query Start/End: Original strand, 9 - 423
Target Start/End: Complemental strand, 19768312 - 19767898
Alignment:
Q  9 aacaaagaataggccaatagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagc 108  Q
    |||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19768312 aacacagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagc 19768213  T
Q  109 agaggnnnnnnncttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaa 208  Q
    |||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19768212 agaggaaaaaaacttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaa 19768113  T
Q  209 gtcttggacatataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataaca 308  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19768112 gtcttggacatataagcttaagtgttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataaca 19768013  T
Q  309 ccatctaccaagacacattctcaacataaaatatcatgctaaatagtttttgagttataggttgtggaccgtcataatattcctaaggacctgaaagacc 408  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19768012 ccatctaccaagacacattctgaacataaaatatcatgctaaatagtttttgagttataggttgtggaccgtcataatatttctaaggacctgaaagacc 19767913  T
Q  409 tccaaaagggctttt 423  Q
    |||||||||||||||    
T  19767912 tccaaaagggctttt 19767898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 45456360 - 45456497
Alignment:
Q  216 acatataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacaccatcta 315  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  45456360 acatataaacttaagtattcttaattcaaatacgatctaaaaacacattaactaccaacactatatagcaatttgaaaatgagatacataacaccatctg 45456459  T
Q  316 ccaagacacattctcaacataaaatatcatgctaaata 353  Q
    | |||| |||||||||||||||||||||||||||||||    
T  45456460 caaagatacattctcaacataaaatatcatgctaaata 45456497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 27 - 187
Target Start/End: Complemental strand, 29199809 - 29199652
Alignment:
Q  27 agtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcagaggnnnnnnncttaca 126  Q
    ||||||||| |||||||||||| ||||  ||||||||||||||||||||||| ||| |||| |||||||||||||||||||   |||       ||||||    
T  29199809 agtaaaattaaatgaacaaagcatatcctacaaaatggctaaacagaaacatcgaaagcaggcctgaatttgaagtagcag---aggaaaaaaacttaca 29199713  T
Q  127 taaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctca 187  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  29199712 taaacaaaacacataatgcagcataacacacaccgacagccacgaagaaaaagctccctca 29199652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 372 - 482
Target Start/End: Original strand, 17593537 - 17593647
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgaccc 471  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| ||| | |||    
T  17593537 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaacacccttaaaagaagcccaagggccc 17593636  T
Q  472 cggacgcgcat 482  Q
    ||| |||||||    
T  17593637 cgggcgcgcat 17593647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 371 - 474
Target Start/End: Original strand, 17601544 - 17601647
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgacc 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| ||| | ||    
T  17601544 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaacacccttaaaagaagcccaagggcc 17601643  T
Q  471 ccgg 474  Q
    ||||    
T  17601644 ccgg 17601647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 461
Target Start/End: Complemental strand, 10813280 - 10813189
Alignment:
Q  371 tgtggaccgtcataatattcctaa-ggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  10813280 tgtggaccgttataatattcttaaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggctttaacacccttaaaagaagc 10813189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 15417671 - 15417761
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   || | ||||||||||||||||||||    
T  15417671 tgtggaccgtcataatattcctaaggaactgaaagacctccaaaagggcttttagatccctcaaacagtccttaacacccttaaaagaagc 15417761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 12572321 - 12572461
Alignment:
Q  29 taaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcagaggnnnnnnncttacata 128  Q
    ||||||||||| |||||||  |||   |||||||||||||| ||||| ||||||||||||||||||||||||||||||||  |||       ||||||||    
T  12572321 taaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaattgaaggcagacctgaatttgaagtagcagcgcaggcaaaaaacttacata 12572420  T
Q  129 aacaaaacacataatgcagtataacacacactgacagccac 169  Q
    ||||||||||| ||||| |  |||||||||||||| |||||    
T  12572421 aacaaaacacacaatgccgcgtaacacacactgactgccac 12572461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 13548785 - 13548925
Alignment:
Q  29 taaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcagaggnnnnnnncttacata 128  Q
    ||||||||||| |||||||  |||   |||||||||||||| ||||| ||||||||||||||||||||||||||||||||  |||       ||||||||    
T  13548785 taaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaattgaaggcagacctgaatttgaagtagcagcgcaggcaaaaaacttacata 13548884  T
Q  129 aacaaaacacataatgcagtataacacacactgacagccac 169  Q
    ||||||||||| ||||| |  |||||||||||||| |||||    
T  13548885 aacaaaacacacaatgccgcgtaacacacactgactgccac 13548925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 373 - 461
Target Start/End: Complemental strand, 10816174 - 10816085
Alignment:
Q  373 tggaccgtcataatattcctaa-ggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||    
T  10816174 tggaccgttataatattcttaaaggacctgaaagacctccaaaatggcttttagacccctcaagaaggccttaacacccttaaaagaagc 10816085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 8368526 - 8368442
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||| | ||| |||||||||||    
T  8368526 tggaccgttataatattcctaaggacctgaaagaccttcaaaagggcttcttagacccctcaagaaggccttagcacccttaaaa 8368442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 455
Target Start/End: Complemental strand, 10777131 - 10777049
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaa 455  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| |||| |||| | ||||||||||||||    
T  10777131 tggaccgtcataatattcctaaggacct-aaaaacctccaaaagggcttcttagacctctcaagaaggccttaacacccttaaa 10777049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 417
Target Start/End: Original strand, 38700029 - 38700074
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagg 417  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  38700029 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagg 38700074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 26900850 - 26900791
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  26900850 tgtggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccc 26900791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 452
Target Start/End: Complemental strand, 94816 - 94735
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacaccctt 452  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| |||| |||| | ||| |||||||    
T  94816 tgtggaccgtcataatattcctaagga-cttaaagacctccaaaagggcttcttagacctctcaagaaggccttagcaccctt 94735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 18556524 - 18556581
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  18556524 tggaccgtcataatattcctatggacctaaaagacctccaaaagggcttcttagaccc 18556581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 26907452 - 26907395
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  26907452 tggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccc 26907395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 419
Target Start/End: Complemental strand, 8854336 - 8854288
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggc 419  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||    
T  8854336 tgtggaccgtcataatattcctaaggacctaaaagaccttcaaaagggc 8854288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 16091696 - 16091736
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16091696 tggaccgtcataatattcctaaggacctgaaagacctccaa 16091736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 103668 - 103606
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctca 433  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| ||||    
T  103668 tgtggaccgtcataatattcctaagga-cttaaagacctccaaaagggcttcttagacctctca 103606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 10497496 - 10497554
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagaccc 429  Q
    ||||||||||||  |||||||| ||||||| |||||||||||||| |||||||||||||    
T  10497496 tgtggaccgtcaatatattcctgaggacctaaaagacctccaaaaaggcttttagaccc 10497554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 14789996 - 14789886
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttaga-cccctcacgaagacgttaacacccttaaaagaagcgcaatgaccc 471  Q
    |||||||||||| ||||||||||||| | |||||||| |  |||||||| |||| ||||||| ||||   ||||||||||||||||| || ||| | |||    
T  14789996 tggaccgtcatattattcctaaggactttaaagaccttcggaagggcttctagaccccctcaagaaggtcttaacacccttaaaagaggcccaagggccc 14789897  T
Q  472 cggacgcgcat 482  Q
    ||| |||||||    
T  14789896 cgggcgcgcat 14789886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 426
Target Start/End: Original strand, 51199114 - 51199168
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctcca-aaagggcttttaga 426  Q
    |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||    
T  51199114 tggaccgtcataatattcctaaggacctaaaagatctccagaaagggcttttaga 51199168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 16082520 - 16082560
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  16082520 tggaccgttataatattcctaaggacctgaaagacctccaa 16082560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 419
Target Start/End: Complemental strand, 8857172 - 8857126
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggc 419  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||    
T  8857172 tggaccgtcacaatattcctaaggacctaaaagaccttcaaaagggc 8857126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 11134298 - 11134248
Alignment:
Q  368 ggttgtggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    ||||||||||||||||||||||||||||| | | |||| |||||| |||||    
T  11134298 ggttgtggaccgtcataatattcctaagggcttaaaagccctccagaaggg 11134248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 16082559 - 16082617
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  16082559 aagacctccaaaaggacttttagacccctcaggaaggccttagtacctttaaaagaagc 16082617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 16091735 - 16091793
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  16091735 aagacctccaaaaggacttttagacccctcaggaaggccttagtacctttaaaagaagc 16091793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 368 - 418
Target Start/End: Complemental strand, 19777576 - 19777526
Alignment:
Q  368 ggttgtggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    ||||||||||||||||||||||||||||| | | |||| |||||| |||||    
T  19777576 ggttgtggaccgtcataatattcctaagggcttaaaagccctccagaaggg 19777526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 400
Target Start/End: Complemental strand, 8854506 - 8854477
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacct 400  Q
    ||||||||||||||||||||||||||||||    
T  8854506 tgtggaccgtcataatattcctaaggacct 8854477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 19808672 - 19808627
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  19808672 tggaccgtcataatattcctaagggcttgaaagccctccagaaggg 19808627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 10496591 - 10496647
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagaccc 429  Q
    ||||||||||  |||||||| ||||||| ||||||||||| || || ||||||||||    
T  10496591 tggaccgtcaatatattcctgaggacctaaaagacctccagaaaggtttttagaccc 10496647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 297; Significance: 1e-167; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 9 - 373
Target Start/End: Complemental strand, 22083005 - 22082640
Alignment:
Q  9 aacaaagaataggccaatagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagc 108  Q
    |||| ||| ||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  22083005 aacacagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggcaaaacagaaacattgaaggcatacctgaatttgaagtagcagc 22082906  T
Q  109 agaggnnnnnnncttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaa 208  Q
     |||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22082905 ggagaaaaaaaacttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaa 22082806  T
Q  209 gtcttggacatataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataaca 308  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  22082805 gtcttggacatataagcttaagtcttcttaattcaactacgatctaaaaacacatcgactaccaacactatatagcaatttgaaaatgagatacataaca 22082706  T
Q  309 ccatctaccaagacacattctcaacataaaatatcatgctaaatag-tttttgagttataggttgt 373  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22082705 ccatctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgt 22082640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 371 - 482
Target Start/End: Complemental strand, 17997121 - 17997010
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgacc 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| | |||||||||||||||||||| ||| | ||    
T  17997121 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggtttttagacccctcaagaaggccttaacacccttaaaagaagcccaagggcc 17997022  T
Q  471 ccggacgcgcat 482  Q
    |||| |||||||    
T  17997021 ccgggcgcgcat 17997010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 371 - 461
Target Start/End: Complemental strand, 13727946 - 13727856
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  13727946 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaacacccttaaaagaagc 13727856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 25969985 - 25970073
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||| ||| ||||    
T  25969985 tggaccgtcataatattcctaaggacctgaaagacctccaaaaaggcttttagacccctcaagaaggccttaacacccttcaaaaaagc 25970073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 25974425 - 25974513
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||| ||| ||||    
T  25974425 tggaccgtcataatattcctaaggacctgaaagacctccaaaaaggcttttagacccctcaagaaggccttaacacccttcaaaaaagc 25974513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 377 - 461
Target Start/End: Complemental strand, 19573930 - 19573846
Alignment:
Q  377 ccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  19573930 ccgtcataatattcctaaggacctgaaagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 19573846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 371 - 461
Target Start/End: Complemental strand, 20090746 - 20090656
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||||| |||| |||| | ||| ||||||||||||||||    
T  20090746 tgtggaccgtcataatattcctaaggacctgaaagacctctcaaaaggctttaagacctctcaagaaggctttagcacccttaaaagaagc 20090656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 19011925 - 19011866
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  19011925 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 19011866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 16688412 - 16688462
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16688412 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 16688462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 8667946 - 8668005
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  8667946 tgtggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccc 8668005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 368 - 438
Target Start/End: Original strand, 22467389 - 22467460
Alignment:
Q  368 ggttgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaag 438  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||||||| ||||| |||||| ||||    
T  22467389 ggttgtggactgtcataatattcttaaggacctaaaagacctccaaaagggcttcttagatccctcaagaag 22467460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 19008786 - 19008725
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctca 433  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||  |||||||||||    
T  19008786 tggaccgtcataatattcctaaggacctaaaagaccttcaaaagggcttcctagacccctca 19008725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 413
Target Start/End: Complemental strand, 19577562 - 19577521
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  19577562 gtggaccgtcataatattcctaaggacctgaaagacctccaa 19577521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 433
Target Start/End: Complemental strand, 18929686 - 18929623
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctca 433  Q
    |||||||||||||||||||||||||||||| ||||| || |||||||||||  |||||||||||    
T  18929686 tgtggaccgtcataatattcctaaggacctaaaagatcttcaaaagggcttcctagacccctca 18929623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 19019556 - 19019497
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    ||||||| ||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  19019556 tgtggactgtcataatattcctatggacctaaaagacctccaaaagggcttcttagaccc 19019497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 421
Target Start/End: Original strand, 16666142 - 16666184
Alignment:
Q  379 gtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  16666142 gtcataatattcctaaggacctaaaagacctccaaaagggctt 16666184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 8649918 - 8649966
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  8649918 tggaccgtcataatatttctaaggacctaagagacctccaaaagggctt 8649966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 11225837 - 11225877
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  11225837 tggaccgtcataatattcctaaggacttgaaagacctccaa 11225877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Complemental strand, 4279799 - 4279752
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    |||||||||||||||||||||||||||| | |||| |||||| |||||    
T  4279799 tgtggaccgtcataatattcctaaggacttaaaagccctccagaaggg 4279752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 429
Target Start/End: Original strand, 7433232 - 7433290
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctcca-aaagggcttttagaccc 429  Q
    ||||||||||||||||||||||| | | | |||||||||||  ||||||||||||||||    
T  7433232 gtggaccgtcataatattcctaaaggcttaaaagacctccaggaagggcttttagaccc 7433290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 11225876 - 11225934
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  11225876 aagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 11225934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 11231198 - 11231256
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  11231198 aagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 11231256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 11694578 - 11694628
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||||||| | | |||| |||||| ||||||||    
T  11694578 tgtggaccgtcataatattcctaagggcttaaaagccctccagaagggctt 11694628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 418
Target Start/End: Complemental strand, 4283079 - 4283034
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    |||||||||||||||||||||||||| | |||| |||||| |||||    
T  4283079 tggaccgtcataatattcctaaggacttaaaagccctccagaaggg 4283034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 418
Target Start/End: Complemental strand, 23607286 - 23607245
Alignment:
Q  377 ccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    ||||||||||||||||||| |||| |||||||| ||||||||    
T  23607286 ccgtcataatattcctaagaacctaaaagaccttcaaaaggg 23607245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 280; Significance: 1e-156; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 18 - 369
Target Start/End: Original strand, 37616984 - 37617331
Alignment:
Q  18 taggccaatagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcagaggnnnn 117  Q
    ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||| ||||        
T  37616984 taggcaaagagtaaaattgaatgaaaaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacct-----tgaagtagcagcggaggaaaa 37617078  T
Q  118 nnncttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaagtcttggac 217  Q
       ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37617079 aaacttacataaacaaaacacataatgcagtataacacacgctgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaagtcttggac 37617178  T
Q  218 atataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacaccatctacc 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  37617179 atataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacaccatctatc 37617278  T
Q  318 aagacacattctcaacataaaatatcatgctaaatag-tttttgagttatagg 369  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37617279 aagacacattctcaacataaaatatcatgctaaatagctttttgagttatagg 37617331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 27788906 - 27788996
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||| |||||  |||||| |||| | | |||| |||||||||||||    
T  27788906 tgtgaaccgtcataatattcctaaggacctgaaaggcctccaaaagggcatttagttccctcaagaaggcctaaacatccttaaaagaagc 27788996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 374 - 482
Target Start/End: Original strand, 23882218 - 23882326
Alignment:
Q  374 ggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgaccccg 473  Q
    ||||||||||||||||||||| ||||| ||||||||||  |||||| | ||||||||||| |||| | |||| ||| |||||||| || ||| | |||||    
T  23882218 ggaccgtcataatattcctaaagaccttaaagacctccggaagggcgtctagacccctcaagaaggccttaataccattaaaagaggcccaagggccccg 23882317  T
Q  474 gacgcgcat 482  Q
    | |||||||    
T  23882318 ggcgcgcat 23882326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 370 - 458
Target Start/End: Original strand, 23878566 - 23878654
Alignment:
Q  370 ttgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaaga 458  Q
    ||||||||||||||||||||||||| ||||| |||||| |||  |||||| | ||||||||||| |||| | |||| ||| ||||||||    
T  23878566 ttgtggaccgtcataatattcctaaagaccttaaagacatccggaagggcgtctagacccctcaagaaggccttaataccattaaaaga 23878654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 10757099 - 10757185
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    |||||||||||||||||||||||| ||||| |||||||  |||||||||||  ||||||| ||| |||| | ||| |||||||||||    
T  10757099 tgtggaccgtcataatattcctaaagacctaaaagaccctcaaaagggcttcctagacccttcaagaaggccttagcacccttaaaa 10757185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 10970270 - 10970356
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    |||||||||||||||||||||||| ||||| |||||||  |||||||||||  ||||||| ||| |||| | ||| |||||||||||    
T  10970270 tgtggaccgtcataatattcctaaagacctaaaagaccctcaaaagggcttcctagacccttcaagaaggccttagcacccttaaaa 10970356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 10754824 - 10754908
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    |||||||| ||||||||||||||||||| |||||||  |||||||||||  ||||||| ||| |||| | ||| |||||||||||    
T  10754824 tggaccgttataatattcctaaggacctaaaagaccctcaaaagggcttcctagacccttcaagaaggccttagcacccttaaaa 10754908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 456
Target Start/End: Original strand, 10968593 - 10968677
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    |||||||| ||||||||||||||||||| |||||||  |||||||||||  ||||||| ||| |||| | ||| |||||||||||    
T  10968593 tggaccgttataatattcctaaggacctaaaagaccctcaaaagggcttcctagacccttcaagaaggccttagcacccttaaaa 10968677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 429
Target Start/End: Original strand, 53993015 - 53993059
Alignment:
Q  385 atattcctaaggacctgaaagacctccaaaagggcttttagaccc 429  Q
    ||||| |||||||||| |||||||||||||| |||||||||||||    
T  53993015 atatttctaaggacctaaaagacctccaaaaaggcttttagaccc 53993059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 13563591 - 13563547
Alignment:
Q  385 atattcctaaggacctgaaagacctccaaaagggcttttagaccc 429  Q
    |||||| ||||||||| ||||||||| | ||||||||||||||||    
T  13563591 atattcttaaggacctaaaagacctctagaagggcttttagaccc 13563547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 29724989 - 29724941
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||||| | | |||| |||||| ||||||||    
T  29724989 tggaccgtcataatattcctaagggcttaaaagccctccagaagggctt 29724941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 130; Significance: 4e-67; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 216 - 372
Target Start/End: Complemental strand, 40164908 - 40164751
Alignment:
Q  216 acatataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacaccatcta 315  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  40164908 acatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacgctatatagcaatttgaaaatgagatacataacaccatctt 40164809  T
Q  316 ccaagacacattctcaacataaaatatcatgctaaat-agtttttgagttataggttg 372  Q
    |||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  40164808 ccaagacacattatcaacataaaatatcatgctaaataactttttgagttataggttg 40164751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 40933064 - 40933152
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  40933064 tggaccgtcataatattcctaaggacctgaaagaccttcaaaagggcttttagacccctcaagaaggccttaacacccttaaaagaagc 40933152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 40936457 - 40936547
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||| | ||||||||||||||||||||    
T  40936457 tgtggaccgtcataatattcctaaggacctgaaagaccttcaaaagggcttttagacctctcaagaaggccttaacacccttaaaagaagc 40936547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 371 - 456
Target Start/End: Complemental strand, 26857713 - 26857627
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||| | ||| |||||||||||    
T  26857713 tgtggaccgtcataatattcctaaggaactgaaagacctccaaaagggcttcttagacccctcaagaaggccttagcacccttaaaa 26857627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 26863944 - 26863860
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||| | ||| |||||||||||    
T  26863944 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttcttagacccttcaagaaggccttagcacccttaaaa 26863860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 187
Target Start/End: Complemental strand, 4351779 - 4351620
Alignment:
Q  29 taaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcagaggnnnnnnncttacata 128  Q
    ||||||||||| |||||||  |||   |||||||||||||| ||||| || |||||||||||| ||||||||||||||||  |||       ||||||||    
T  4351779 taaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaatcgaaggcagacctaaatttgaagtagcagcgcaggaacaaaacttacata 4351680  T
Q  129 aacaaaacacataatgcagtataacacacactgacagccacg-aagaaaaagctccctca 187  Q
    ||||||||| | ||||| |  |||||||||||||| |||||| || ||||||||||||||    
T  4351679 aacaaaacaaacaatgccgcgtaacacacactgactgccacgaaaaaaaaagctccctca 4351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 428
Target Start/End: Complemental strand, 19049967 - 19049912
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacc 428  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  19049967 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggattttagacc 19049912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 32965631 - 32965721
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||| ||||||| |||||| |||| |||||| |||||| ||| |||| | ||| |||||||| |||||||    
T  32965631 tgtggaccgtcataatattcctaagaacctgaaggacctctaaaatggctttaagacccgtcaagaaggctttagcacccttagaagaagc 32965721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 421
Target Start/End: Original strand, 38840531 - 38840581
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  38840531 tgtggaccgtcataatattcctaaggatctaaaagacctccaaaagggctt 38840581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 438
Target Start/End: Original strand, 8460024 - 8460091
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaag 438  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||| |||| ||||    
T  8460024 tgtggaccgtcataatattcctaagga-cttaaagacctccaaaagggcttcttagacctctcaagaag 8460091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 421
Target Start/End: Original strand, 38836614 - 38836662
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  38836614 tggaccgtcataatattcctaaggatctaaaagacctccaaaagggctt 38836662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 20817269 - 20817323
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagac 427  Q
    ||||||||||  |||||||||||||||||||||| ||||| ||||||||||||||    
T  20817269 tggaccgtcaatatattcctaaggacctgaaagatctccagaagggcttttagac 20817323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 405
Target Start/End: Original strand, 38840360 - 38840394
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaag 405  Q
    |||||||||||||||||||||||||||||| ||||    
T  38840360 tgtggaccgtcataatattcctaaggacctaaaag 38840394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 5e-60; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 216 - 353
Target Start/End: Complemental strand, 6921749 - 6921612
Alignment:
Q  216 acatataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacaccatcta 315  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6921749 acatataaacttaagtattcttaattcaaatacgatctaaaaacacattaactaccaacactatatagcaatttgaaaatgagatacataacaccatctg 6921650  T
Q  316 ccaagacacattctcaacataaaatatcatgctaaata 353  Q
    | ||||||||||||||||||||||||||||||||||||    
T  6921649 caaagacacattctcaacataaaatatcatgctaaata 6921612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 216 - 353
Target Start/End: Original strand, 38238129 - 38238266
Alignment:
Q  216 acatataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacaccatcta 315  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  38238129 acatataaacttaagtattcttaattcaaatacgatctaaaaacacattaactaccaacactatatagcaatttgaaaatgagatacataacaccatctg 38238228  T
Q  316 ccaagacacattctcaacataaaatatcatgctaaata 353  Q
    | ||||||||||||||||||||||||||||||||||||    
T  38238229 caaagacacattctcaacataaaatatcatgctaaata 38238266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 370 - 474
Target Start/End: Original strand, 18433046 - 18433150
Alignment:
Q  370 ttgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgac 469  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| ||| ||||||||||| ||| | |    
T  18433046 ttgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaatacctttaaaagaagcccaagggc 18433145  T
Q  470 cccgg 474  Q
    |||||    
T  18433146 cccgg 18433150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 20514226 - 20514316
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  20514226 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 20514316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 371 - 455
Target Start/End: Original strand, 19751601 - 19751685
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaa 455  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||| |||| | ||| ||||||||||    
T  19751601 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaaggcttcttagacccctcaagaaggccttagcacccttaaa 19751685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 372 - 455
Target Start/End: Original strand, 19749376 - 19749459
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaa 455  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  | |||||||||||| |||| | ||| ||||||||||    
T  19749376 gtggaccgtcataatattcctaaggacctgaaagacctccaaaaggcttcttagacccctcaagaaggccttagcacccttaaa 19749459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 51389655 - 51389733
Alignment:
Q  30 aaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagc 108  Q
    ||||||||| |||||||| ||||||||||||| |||||||||||||||   ||||||||| |||| |||||||||||||    
T  51389655 aaaattgaacgaacaaagtctatcgcacaaaacggctaaacagaaacaccaaaggcagacttgaaattgaagtagcagc 51389733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 371 - 420
Target Start/End: Complemental strand, 20435506 - 20435457
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggct 420  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20435506 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggct 20435457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 15158340 - 15158292
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  15158340 tggaccgtcataatattcctatggacctaaaagacctccaaaagggctt 15158292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 20442358 - 20442398
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20442358 tggaccgtcataatattcctaaggacctgaaagacctccaa 20442398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 371 - 418
Target Start/End: Complemental strand, 15142916 - 15142869
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  15142916 tgtggaccgtcataatattcctatggacctaaaagacctccaaaaggg 15142869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 456
Target Start/End: Complemental strand, 12020500 - 12020415
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    ||||||||||||||| ||||||||||| ||  ||||||||||||||||||| ||||||| |||| |||| | ||| |||||||||||    
T  12020500 tgtggaccgtcataaaattcctaagga-ctttaagacctccaaaagggcttcttagacctctcaagaaggccttagcacccttaaaa 12020415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 24277104 - 24277055
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  24277104 tgtggaccgtcataatattcctaagga-cttaaagacctccaaaagggctt 24277055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 452
Target Start/End: Complemental strand, 24281216 - 24281136
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacaccctt 452  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| || ||||||| |||| |||| | ||| |||||||    
T  24281216 gtggaccgtcataatattcctaagga-cttaaagacctccaaaagggtttcttagacctctcaagaaggccttagcaccctt 24281136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 433
Target Start/End: Complemental strand, 36910744 - 36910684
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctca 433  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| ||||    
T  36910744 tggaccgtcataatattcctaa-gaccttaaagacctccaaaagggcttcttagacctctca 36910684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 20442397 - 20442455
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  20442397 aagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 20442455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 429
Target Start/End: Original strand, 5505409 - 5505450
Alignment:
Q  388 ttcctaaggacctgaaagacctccaaaagggcttttagaccc 429  Q
    |||||||| |||| |||||||| |||||||||||||||||||    
T  5505409 ttcctaagcacctaaaagaccttcaaaagggcttttagaccc 5505450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 555708 - 555660
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||||| | | |||| |||||| ||||||||    
T  555708 tggaccgtcataatattcctaagggcttaaaagccctccagaagggctt 555660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 407
Target Start/End: Complemental strand, 15154625 - 15154589
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagac 407  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  15154625 tgtggaccgtcataatattcctatggacctaaaagac 15154589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 2e-53; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 216 - 365
Target Start/End: Original strand, 7827613 - 7827763
Alignment:
Q  216 acatataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacaccatcta 315  Q
    |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||     
T  7827613 acatataaacttaagtcttcttaattcaaatacaatctaaaaacatatcaactaccaacactatatagcaatttgaaaatgagatacataacaacatctg 7827712  T
Q  316 ccaagacacattctcaacataaaatatcatgctaaat-agtttttgagtta 365  Q
    |||||||||||||||| ||||||| || ||||||||| | |||||||||||    
T  7827713 ccaagacacattctcagcataaaagataatgctaaataactttttgagtta 7827763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 371 - 474
Target Start/End: Original strand, 23696377 - 23696480
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgacc 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||| |||||||||||| ||| | ||    
T  23696377 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaacactcttaaaagaagcccaagggcc 23696476  T
Q  471 ccgg 474  Q
    ||||    
T  23696477 ccgg 23696480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 23692590 - 23692680
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||    
T  23692590 tgtggaccgtcataatattcttaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaacacccttaaaagaagc 23692680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 373 - 482
Target Start/End: Original strand, 3071468 - 3071577
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgacccc 472  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| | | | ||||    
T  3071468 tggaccgtcatagtattcctaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaacacccttaaaagaagccctagggcccc 3071567  T
Q  473 ggacgcgcat 482  Q
    || |||||||    
T  3071568 gggcgcgcat 3071577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 5771732 - 5771791
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  5771732 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 5771791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 26120885 - 26120826
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  26120885 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 26120826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 26126347 - 26126288
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  26126347 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 26126288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 373 - 438
Target Start/End: Complemental strand, 29604053 - 29603987
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaag 438  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| ||||    
T  29604053 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttatacccctcaagaag 29603987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 7311147 - 7311088
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  7311147 tgtggaccgtcataatattcctatggacctaaaagacctccaaaagggcttcttagaccc 7311088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 4876642 - 4876731
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaag 460  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||  ||||  |||||| ||| |||| | ||| |||||||||||||||    
T  4876642 tgtggaccatcataatattcctaaggacctgaaggacctctaaaaatgcttaaagacccgtcaagaaggctttagcacccttaaaagaag 4876731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 45278810 - 45278867
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  45278810 tggaccgtgataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 45278867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 45286109 - 45286166
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  45286109 tggaccgtgataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 45286166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 377 - 421
Target Start/End: Complemental strand, 17932976 - 17932932
Alignment:
Q  377 ccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||    
T  17932976 ccgtcataatattcctatggacctaaaagacctccaaaagggctt 17932932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 30558642 - 30558584
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagaccc 429  Q
    ||||||||||||  ||||||||||| ||||  ||||||||||||||| |||||||||||    
T  30558642 tgtggaccgtcaatatattcctaagaacctagaagacctccaaaaggacttttagaccc 30558584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 371 - 482
Target Start/End: Original strand, 11100004 - 11100115
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgacc 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| | |||||||||||||||||||| ||| | ||    
T  11100004 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggtttttagacccctcaagaaggccttaacacccttaaaagaagcccaagggcc 11100103  T
Q  471 ccggacgcgcat 482  Q
    |||| |||||||    
T  11100104 ccgggcgcgcat 11100115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 372 - 461
Target Start/End: Original strand, 44356862 - 44356951
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  44356862 gtggactgtcataatattcctaaggacctgaaagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 44356951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 371 - 431
Target Start/End: Complemental strand, 43173699 - 43173639
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccct 431  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43173699 tgtggaccgtcataatattcttaaggacctgaaagacctccaaaagggcttttagacccct 43173639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 371 - 456
Target Start/End: Complemental strand, 23522555 - 23522469
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    ||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||||||| |||| | ||| |||||||||||    
T  23522555 tgtggaccgtcataatattcctaaggactcaaaagacctccaaaagggcttcttagacccctcaagaaggccttagcacccttaaaa 23522469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 452
Target Start/End: Complemental strand, 23532784 - 23532704
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggct-tttagacccctcacgaagacgttaacaccctt 452  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||  |||||||||||| |||| | ||| |||||||    
T  23532784 tggaccgtcataatattcctaaggacttaaaagacctccaaaagggctgcttagacccctcaagaaggccttagcaccctt 23532704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 11544588 - 11544673
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    ||||||||||||||| ||||||||||| || |||||||||||||||||||| ||||||| |||| |||| | ||| |||||||||||    
T  11544588 tgtggaccgtcataaaattcctaagga-cttaaagacctccaaaagggcttcttagacctctcaagaaggccttagcacccttaaaa 11544673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 44359984 - 44360024
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44359984 tggaccgtcataatattcctaaggacctgaaagacctccaa 44360024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 372 - 421
Target Start/End: Complemental strand, 15942492 - 15942444
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  15942492 gtggaccgtcataatattcctaaggacct-aaaaacctccaaaagggctt 15942444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 456
Target Start/End: Original strand, 11527184 - 11527269
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaaa 456  Q
    |||||| |||||||| ||||||||||| || ||||||| |||||||||||| ||||||| |||| |||| | ||| |||||||||||    
T  11527184 tgtggatcgtcataaaattcctaagga-cttaaagacccccaaaagggcttcttagacctctcaagaaggccttagcacccttaaaa 11527269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 421
Target Start/End: Complemental strand, 357707 - 357655
Alignment:
Q  369 gttgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||||||||| |   |||| |||||||||||||||    
T  357707 gttgtggaccgtcataatattcctaagggctcaaaagccctccaaaagggctt 357655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 362434 - 362384
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||||||| |   |||| |||||||||||||||    
T  362434 tgtggaccgtcataatattcctaagggctcaaaagccctccaaaagggctt 362384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 44360023 - 44360081
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  44360023 aagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 44360081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 429
Target Start/End: Complemental strand, 9697214 - 9697170
Alignment:
Q  385 atattcctaaggacctgaaagacctccaaaagggcttttagaccc 429  Q
    |||||| ||||||||| ||||||||| | ||||||||||||||||    
T  9697214 atattcttaaggacctaaaagacctctagaagggcttttagaccc 9697170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 4e-30; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 371 - 482
Target Start/End: Original strand, 21938467 - 21938578
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgacc 470  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| ||| ||||||||| | ||| | ||    
T  21938467 tgtggaccgtcataatgttcctaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaatacctttaaaagaatcccaagggcc 21938566  T
Q  471 ccggacgcgcat 482  Q
    |||| |||||||    
T  21938567 ccgggcgcgcat 21938578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 373 - 474
Target Start/End: Original strand, 21935959 - 21936060
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgacccc 472  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||| ||| ||||||||||| ||| | ||||    
T  21935959 tggactgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcaagaaggccttaatacctttaaaagaagcccaagggcccc 21936058  T
Q  473 gg 474  Q
    ||    
T  21936059 gg 21936060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 14366000 - 14366088
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  14366000 tggaccgtcataatattcctaaggacctgaaagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 14366088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 372 - 461
Target Start/End: Complemental strand, 20135209 - 20135120
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  20135209 gtggactgtcataatattcctaaggacctgaaagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 20135120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 371 - 455
Target Start/End: Original strand, 21408226 - 21408311
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaa 455  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| | ||| ||||||||||    
T  21408226 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacccctcaaaaaggccttagcacccttaaa 21408311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 371 - 455
Target Start/End: Original strand, 21802718 - 21802803
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaa 455  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| | ||| ||||||||||    
T  21802718 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacccctcaaaaaggccttagcacccttaaa 21802803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 371 - 455
Target Start/End: Original strand, 21834679 - 21834764
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagacccctcacgaagacgttaacacccttaaa 455  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||  ||| | ||| ||||||||||    
T  21834679 tgtggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacccctcaaaaaggccttagcacccttaaa 21834764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 14673223 - 14673280
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  14673223 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 14673280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 458
Target Start/End: Original strand, 31708764 - 31708849
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaaga 458  Q
    ||||||||||||||||||||||||||||||| |||||| |||| |||||  |||||| ||| |||| | ||| |||||||||||||    
T  31708764 tggaccgtcataatattcctaaggacctgaaggacctctaaaaaggcttaaagacccgtcaagaaggctttagcacccttaaaaga 31708849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 371 - 421
Target Start/End: Complemental strand, 36281564 - 36281514
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  36281564 tgtggaccgtcataatattcctaaggatctaaaagacctccaaaagggctt 36281514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 3299960 - 3300017
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    
T  3299960 tggaccgtcataatattcctatggacctaaaagacctccaaaagggcttcttagaccc 3300017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 31710982 - 31711071
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaag 460  Q
    |||||||| |||||||||||||||||||||||| |||||| ||||  ||||  |||||| ||| |||| | ||| |||||||||||||||    
T  31710982 tgtggaccatcataatattcctaaggacctgaaggacctctaaaaatgcttaaagacccgtcaagaaggctttagcacccttaaaagaag 31711071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 14369580 - 14369620
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14369580 tggaccgtcataatattcctaaggacctgaaagacctccaa 14369620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 14370131 - 14370171
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14370131 tggaccgtcataatattcctaaggacctgaaagacctccaa 14370171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 20132084 - 20132044
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20132084 tggaccgtcataatattcctaaggacctgaaagacctccaa 20132044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 371 - 413
Target Start/End: Original strand, 14676429 - 14676471
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  14676429 tgtggaccgtcataatattcctaaggacctaaaagacctccaa 14676471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 371 - 429
Target Start/End: Original strand, 3303024 - 3303083
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||| || |||||| |||||| ||||||||||||| ||||||||    
T  3303024 tgtggaccgtcataatattcatatggacctaaaagacttccaaaagggcttcttagaccc 3303083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 460
Target Start/End: Complemental strand, 16907219 - 16907132
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaag 460  Q
    |||||||||||||||||||||||||| |||| |||||| |||| || ||  |||||| ||| ||||   |||  ||||||||||||||    
T  16907219 tggaccgtcataatattcctaaggacttgaaggacctctaaaaaggtttaaagacccgtcaagaaggatttaggacccttaaaagaag 16907132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 109
Target Start/End: Complemental strand, 770434 - 770337
Alignment:
Q  9 aacaaagaataggccaatagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagc 108  Q
    ||||| || ||||| ||||||||||||||||  |||||| |||||| |   || |||||||||||||||   ||||||||  |||| |||||||||||||    
T  770434 aacaacgattaggcaaatagtaaaattgaatagacaaagtctatcgta---aacggctaaacagaaacaccaaaggcagaattgaaattgaagtagcagc 770338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 14369619 - 14369677
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  14369619 aagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 14369677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 14370170 - 14370228
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  14370170 aagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 14370228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 405
Target Start/End: Complemental strand, 36281735 - 36281701
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaag 405  Q
    |||||||||||||||||||||||||||||| ||||    
T  36281735 tgtggaccgtcataatattcctaaggacctaaaag 36281701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 371 - 474
Target Start/End: Complemental strand, 20814 - 20711
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagcgcaatgacc 470  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||| | |||| ||| ||||||||||| ||| | ||    
T  20814 tgtggaccgtcataatattcctaaggacctgaaagacctccacaagggcttttagacccttcaagaaggccttaatacctttaaaagaagcccaagggcc 20715  T
Q  471 ccgg 474  Q
    ||||    
T  20714 ccgg 20711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 371 - 461
Target Start/End: Complemental strand, 3176 - 3086
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| |||| | |||| |||||||||||||||    
T  3176 tgtggaccgtcataatattcctaaggacctgaaggactttcaaaagggcttttagacccctcaagaaggccttaaaacccttaaaagaagc 3086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 371 - 461
Target Start/End: Complemental strand, 44567 - 44477
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||   || | ||||||||||||||||||||    
T  44567 tgtggaccgtcataatattcctaaggaactgaaagacctccaaaagggcttttagatccctcaaacagtccttaacacccttaaaagaagc 44477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 373 - 461
Target Start/End: Complemental strand, 11149 - 11060
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggc-ttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||   ||||| ||||||||||||||    
T  11149 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctttttagacccctcaagaaggtcttaacgcccttaaaagaagc 11060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 11884 - 11972
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||   | |||||||||||| |||||    
T  11884 tggaccgtcataatattcctaaggacctgaaagacctcaaaaagggcttttagacccctcaagaaggtctaaacacccttaaaggaagc 11972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 368 - 461
Target Start/End: Original strand, 27349 - 27442
Alignment:
Q  368 ggttgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||| |||||| ||| |||||| ||| ||||||||||||||||    
T  27349 ggttgtggaccgtcataatattcctgaggacctgaaggacctctaaaagagctttaagacccgtcaagaagactttagcacccttaaaagaagc 27442  T

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Target: scaffold0179; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 373 - 461
Target Start/End: Original strand, 24705 - 24793
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| ||| |||| | ||| ||||||||||||||||    
T  24705 tggaccgtcataatattcctaaggacctgaaggacctctaaaagggctttaagacccgtcaagaaggctttagcacccttaaaagaagc 24793  T

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Target: scaffold0167 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 372 - 461
Target Start/End: Complemental strand, 10727 - 10638
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||   | |||||||||||| |||||    
T  10727 gtggaccgtcataatattcctaaggacctaaaagacctccaaaagggcgtttagacccctcaagaaggtctaaacacccttaaaggaagc 10638  T

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Target: scaffold0023 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 372 - 461
Target Start/End: Original strand, 146536 - 146625
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  146536 gtggactgtcataatattcctaaggacctgaaagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 146625  T

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Target: scaffold0023; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 149735 - 149775
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  149735 tggactgtcataatattcctaaggacctgaaagacctccaa 149775  T

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Target: scaffold0023; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 403 - 461
Target Start/End: Original strand, 149774 - 149832
Alignment:
Q  403 aagacctccaaaagggcttttagacccctcacgaagacgttaacacccttaaaagaagc 461  Q
    ||||||||||||||| ||||||||||||||| |||| | |||  ||| |||||||||||    
T  149774 aagacctccaaaaggacttttagacccctcaagaaggccttagtacctttaaaagaagc 149832  T

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Target: scaffold0130 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 364 - 429
Target Start/End: Complemental strand, 19261 - 19195
Alignment:
Q  364 tataggttgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    ||||| || |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  19261 tatagtttttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 19195  T

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Target: scaffold0130; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 382 - 429
Target Start/End: Complemental strand, 15244 - 15196
Alignment:
Q  382 ataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  15244 ataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 15196  T

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Target: scaffold0202 (Bit Score: 44; Significance: 7e-16; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 371 - 429
Target Start/End: Complemental strand, 10646 - 10587
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  10646 tgtggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccc 10587  T

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Target: scaffold0202; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 14131 - 14074
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 429  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  14131 tggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccc 14074  T

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Target: scaffold0001 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 373 - 420
Target Start/End: Complemental strand, 151022 - 150975
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggct 420  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  151022 tggaccgtcataatattcctaaggacctgaaggacctccaaaagggct 150975  T

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Target: scaffold0074 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 418
Target Start/End: Original strand, 56359 - 56404
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  56359 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 56404  T

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Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 372 - 460
Target Start/End: Original strand, 194454 - 194543
Alignment:
Q  372 gtggaccgtcataatattcctaaggacctgaaagacctc-caaaagggcttttagacccctcacgaagacgttaacacccttaaaagaag 460  Q
    |||||||||||||||||||||||||||||||| ||||||  ||||||||||  |||||| ||| | || | ||| |||||||||||||||    
T  194454 gtggaccgtcataatattcctaaggacctgaaggacctctaaaaagggcttaaagacccgtcaaggaggctttagcacccttaaaagaag 194543  T

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Target: scaffold1505 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 421
Target Start/End: Complemental strand, 684 - 636
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||    
T  684 tggaccgtcataatattcctaaggacctaaaggacctccaaaagggctt 636  T

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Target: scaffold0878 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 371 - 460
Target Start/End: Original strand, 4100 - 4191
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctc--caaaagggcttttagacccctcacgaagacgttaacacccttaaaagaag 460  Q
    ||||||||||||||||||||||||||||||||| ||||||   ||||||||||  |||||| ||| | || | ||| |||||||||||||||    
T  4100 tgtggaccgtcataatattcctaaggacctgaaggacctctaaaaaagggcttaaagacccgtcaaggaggctttagcacccttaaaagaag 4191  T

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Target: scaffold0878; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 1688 - 1732
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaa 415  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||    
T  1688 tgtggaccgtcataatattcctaaggacctgaaggacctctaaaa 1732  T

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Target: scaffold0208 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 370 - 421
Target Start/End: Complemental strand, 1788 - 1738
Alignment:
Q  370 ttgtggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt 421  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  1788 ttgtggaccgtcataatattcctaagga-cttaaagacctccaaaagggctt 1738  T

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Target: scaffold0443 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 413
Target Start/End: Complemental strand, 6562 - 6522
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  6562 tggacagtcataatattcctaaggacctgaaagacctccaa 6522  T

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Target: scaffold0369 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 415
Target Start/End: Original strand, 7409 - 7453
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaa 415  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||    
T  7409 tgtggaccgtcataatattcctaaggacctgaaggacctctaaaa 7453  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 413
Target Start/End: Original strand, 78529 - 78569
Alignment:
Q  373 tggaccgtcataatattcctaaggacctgaaagacctccaa 413  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  78529 tggaccgtcatattattcctaaggacctgaaggacctccaa 78569  T

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Target: scaffold2018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold2018
Description:

Target: scaffold2018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 371 - 418
Target Start/End: Original strand, 930 - 977
Alignment:
Q  371 tgtggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 418  Q
    |||||||||||||||||||||||||||| | |||| |||||| |||||    
T  930 tgtggaccgtcataatattcctaaggacttaaaagccctccagaaggg 977  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 368 - 400
Target Start/End: Complemental strand, 72379 - 72347
Alignment:
Q  368 ggttgtggaccgtcataatattcctaaggacct 400  Q
    ||||||||||||||||||||||||||| |||||    
T  72379 ggttgtggaccgtcataatattcctaaagacct 72347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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