View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1918_low_42 (Length: 286)
Name: NF1918_low_42
Description: NF1918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1918_low_42 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 17 - 272
Target Start/End: Complemental strand, 30403124 - 30402869
Alignment:
| Q |
17 |
catacttaatcttaaatcctgtgctaataaataagaaaacatttgaagagctagagatacaagataaatatgttgccaagttagaaaagggggttggtgt |
116 |
Q |
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| T |
30403124 |
catacttaatcttaaaccctgtgctaataaataagaaaacatttgaagagctagagatacaagataaatatgttgccaagttagaaaagggggtaggtgt |
30403025 |
T |
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| Q |
117 |
cccatgattgaaaatatgtaagctataaattttttgcttttgaagttattttatgcagatgcgcgtgcatctctggttcctcatatcgtatgtacaggta |
216 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
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| T |
30403024 |
cccatgattgaaaatatgtacgctataaattttttgcttttgaagttattttatgcagatgcgcgtgcatctctggttcctcgtatcatatgtacaggta |
30402925 |
T |
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| Q |
217 |
atatggatatgtttcagatcttctgtattggagggaaatggtgcaaatgtgtaact |
272 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30402924 |
atatggatatgtttcagatcttctgtattggagggaaatggtgcaaatgtgtaact |
30402869 |
T |
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