View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1918_low_69 (Length: 207)

Name: NF1918_low_69
Description: NF1918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1918_low_69
NF1918_low_69
[»] chr5 (34 HSPs)
chr5 (110-186)||(10360373-10360449)
chr5 (110-186)||(33451284-33451360)
chr5 (63-105)||(16594401-16594443)
chr5 (114-186)||(13563419-13563491)
chr5 (114-177)||(42249581-42249644)
chr5 (63-105)||(1293111-1293153)
chr5 (63-105)||(4088447-4088489)
chr5 (63-105)||(6517716-6517758)
chr5 (63-105)||(8920082-8920124)
chr5 (63-105)||(10649439-10649481)
chr5 (63-105)||(13089807-13089849)
chr5 (63-111)||(19522029-19522076)
chr5 (65-105)||(21155991-21156031)
chr5 (70-105)||(14062865-14062900)
chr5 (70-105)||(43441742-43441777)
chr5 (63-105)||(189728-189770)
chr5 (63-105)||(7287215-7287257)
chr5 (63-105)||(10659098-10659140)
chr5 (63-105)||(14011321-14011363)
chr5 (63-105)||(14321980-14322022)
chr5 (63-105)||(16690503-16690545)
chr5 (63-105)||(18695322-18695364)
chr5 (63-105)||(19481207-19481249)
chr5 (63-105)||(21922170-21922212)
chr5 (63-105)||(22098259-22098301)
chr5 (67-105)||(24468315-24468353)
chr5 (63-101)||(25603693-25603731)
chr5 (63-105)||(28306158-28306199)
chr5 (63-105)||(30640794-30640836)
chr5 (63-112)||(9581576-9581625)
chr5 (64-105)||(17097828-17097869)
chr5 (64-105)||(27487891-27487932)
chr5 (64-105)||(32872924-32872965)
chr5 (64-105)||(43214085-43214126)
[»] chr8 (45 HSPs)
chr8 (109-187)||(33112284-33112362)
chr8 (110-186)||(42841595-42841671)
chr8 (110-186)||(45375152-45375228)
chr8 (110-186)||(1569409-1569485)
chr8 (64-124)||(9549225-9549285)
chr8 (62-106)||(21514961-21515005)
chr8 (67-110)||(31266263-31266306)
chr8 (63-105)||(3946244-3946286)
chr8 (63-105)||(4658288-4658330)
chr8 (63-105)||(10839507-10839549)
chr8 (63-105)||(23754732-23754774)
chr8 (63-105)||(25987812-25987854)
chr8 (63-105)||(26026900-26026942)
chr8 (63-105)||(33100494-33100536)
chr8 (63-105)||(40649454-40649496)
chr8 (64-105)||(5601013-5601054)
chr8 (64-105)||(5639566-5639607)
chr8 (64-105)||(42620003-42620044)
chr8 (66-105)||(7598712-7598751)
chr8 (63-110)||(12172142-12172189)
chr8 (63-110)||(12416570-12416617)
chr8 (63-105)||(67186-67228)
chr8 (63-105)||(1068610-1068652)
chr8 (63-105)||(5771997-5772039)
chr8 (63-105)||(6849153-6849195)
chr8 (63-105)||(10644827-10644869)
chr8 (63-105)||(12707153-12707195)
chr8 (63-105)||(13970923-13970965)
chr8 (67-105)||(14707373-14707411)
chr8 (63-105)||(25830271-25830313)
chr8 (63-105)||(27325762-27325803)
chr8 (63-105)||(29991416-29991458)
chr8 (63-105)||(31596952-31596994)
chr8 (63-105)||(33279574-33279616)
chr8 (63-105)||(34718119-34718161)
chr8 (63-105)||(35067164-35067206)
chr8 (63-105)||(41600313-41600355)
chr8 (63-105)||(44061721-44061763)
chr8 (64-105)||(18651374-18651415)
chr8 (64-105)||(22719444-22719484)
chr8 (63-104)||(23793115-23793156)
chr8 (64-105)||(31249551-31249591)
chr8 (64-105)||(34435763-34435804)
chr8 (64-105)||(42733591-42733632)
chr8 (114-187)||(43161891-43161964)
[»] chr1 (40 HSPs)
chr1 (110-170)||(45811840-45811900)
chr1 (109-186)||(1883982-1884059)
chr1 (110-187)||(52128937-52129014)
chr1 (62-106)||(18982522-18982566)
chr1 (62-103)||(36775112-36775153)
chr1 (110-187)||(47215316-47215392)
chr1 (67-111)||(36775070-36775114)
chr1 (63-106)||(46859421-46859464)
chr1 (64-105)||(52714927-52714968)
chr1 (63-105)||(649772-649814)
chr1 (63-105)||(9566986-9567028)
chr1 (63-105)||(10890071-10890113)
chr1 (63-105)||(13489666-13489708)
chr1 (63-105)||(15705087-15705129)
chr1 (63-105)||(19947766-19947808)
chr1 (63-105)||(48983693-48983735)
chr1 (63-105)||(52362486-52362528)
chr1 (64-105)||(49020430-49020471)
chr1 (63-105)||(2571639-2571680)
chr1 (63-105)||(3159380-3159421)
chr1 (63-105)||(4213076-4213118)
chr1 (63-105)||(8350222-8350263)
chr1 (63-105)||(9987955-9987997)
chr1 (63-105)||(21433426-21433468)
chr1 (63-105)||(27742621-27742663)
chr1 (63-105)||(30467551-30467593)
chr1 (63-105)||(30658873-30658915)
chr1 (63-105)||(30735319-30735360)
chr1 (63-105)||(32915097-32915139)
chr1 (63-105)||(34008184-34008226)
chr1 (63-105)||(37685335-37685376)
chr1 (63-105)||(37700142-37700183)
chr1 (63-105)||(44789168-44789210)
chr1 (63-105)||(47214212-47214254)
chr1 (63-105)||(47642632-47642674)
chr1 (63-105)||(47820526-47820568)
chr1 (63-105)||(48858827-48858869)
chr1 (63-105)||(49570000-49570042)
chr1 (63-105)||(49931557-49931599)
chr1 (64-105)||(43893261-43893302)
[»] chr7 (25 HSPs)
chr7 (110-186)||(47077134-47077210)
chr7 (62-109)||(2819253-2819300)
chr7 (62-106)||(48814832-48814876)
chr7 (110-186)||(36105972-36106048)
chr7 (63-105)||(12007211-12007253)
chr7 (63-105)||(37899327-37899369)
chr7 (63-105)||(41893919-41893961)
chr7 (63-105)||(43159600-43159642)
chr7 (63-105)||(47448830-47448872)
chr7 (63-112)||(33057376-33057425)
chr7 (114-186)||(11993061-11993133)
chr7 (62-105)||(40077391-40077434)
chr7 (63-105)||(2008883-2008925)
chr7 (63-105)||(19223443-19223485)
chr7 (63-105)||(30941390-30941431)
chr7 (63-105)||(32777732-32777774)
chr7 (63-105)||(35586798-35586840)
chr7 (63-105)||(37899238-37899280)
chr7 (63-105)||(44895598-44895639)
chr7 (63-104)||(12651333-12651374)
chr7 (64-105)||(22638910-22638951)
chr7 (64-105)||(23910277-23910318)
chr7 (63-100)||(31445326-31445363)
chr7 (72-105)||(35293132-35293165)
chr7 (64-105)||(40854681-40854722)
[»] chr3 (40 HSPs)
chr3 (62-106)||(37143124-37143168)
chr3 (64-106)||(31425537-31425579)
chr3 (64-106)||(31931045-31931087)
chr3 (63-105)||(48353000-48353042)
chr3 (63-105)||(49875800-49875842)
chr3 (114-187)||(53829255-53829328)
chr3 (63-119)||(50886183-50886238)
chr3 (63-106)||(15927620-15927663)
chr3 (63-105)||(31350631-31350673)
chr3 (72-106)||(31664627-31664661)
chr3 (63-105)||(49021715-49021757)
chr3 (63-105)||(55400003-55400045)
chr3 (64-105)||(33976420-33976461)
chr3 (110-187)||(34267729-34267806)
chr3 (64-105)||(52963342-52963383)
chr3 (63-114)||(10811130-10811181)
chr3 (63-105)||(9862537-9862579)
chr3 (63-105)||(14207283-14207325)
chr3 (63-105)||(14215031-14215073)
chr3 (63-105)||(19150344-19150386)
chr3 (63-105)||(21196128-21196170)
chr3 (63-105)||(26014816-26014857)
chr3 (63-105)||(27168707-27168749)
chr3 (63-105)||(29573381-29573423)
chr3 (63-105)||(31376790-31376832)
chr3 (63-105)||(32362937-32362979)
chr3 (63-105)||(34057978-34058020)
chr3 (63-105)||(37894268-37894310)
chr3 (63-105)||(37927230-37927272)
chr3 (63-105)||(42357106-42357147)
chr3 (63-105)||(45054978-45055020)
chr3 (63-105)||(46623911-46623952)
chr3 (63-105)||(47472333-47472374)
chr3 (63-105)||(49167754-49167796)
chr3 (63-105)||(49417579-49417621)
chr3 (63-105)||(52939657-52939698)
chr3 (63-101)||(54099382-54099420)
chr3 (62-107)||(39629863-39629908)
chr3 (114-187)||(44449961-44450034)
chr3 (110-186)||(46960613-46960688)
[»] chr6 (23 HSPs)
chr6 (63-106)||(28982664-28982707)
chr6 (109-172)||(30239162-30239225)
chr6 (63-107)||(5456875-5456919)
chr6 (63-106)||(354279-354322)
chr6 (62-105)||(34383882-34383925)
chr6 (63-105)||(15368848-15368890)
chr6 (63-105)||(20822893-20822935)
chr6 (63-105)||(24900779-24900821)
chr6 (63-105)||(32459542-32459584)
chr6 (63-103)||(5739789-5739829)
chr6 (66-105)||(3552182-3552221)
chr6 (62-105)||(32046702-32046745)
chr6 (63-105)||(8098621-8098662)
chr6 (63-105)||(8505799-8505841)
chr6 (63-105)||(11635560-11635602)
chr6 (63-105)||(15318213-15318255)
chr6 (63-105)||(17551404-17551446)
chr6 (63-105)||(22079589-22079630)
chr6 (63-105)||(25811864-25811905)
chr6 (63-105)||(33421764-33421806)
chr6 (63-105)||(33712324-33712366)
chr6 (63-105)||(34047391-34047432)
chr6 (65-105)||(23632664-23632704)
[»] chr2 (25 HSPs)
chr2 (63-110)||(22526019-22526066)
chr2 (63-105)||(2563708-2563750)
chr2 (63-105)||(6999093-6999135)
chr2 (63-105)||(13765404-13765446)
chr2 (63-105)||(18737899-18737941)
chr2 (63-105)||(43057068-43057110)
chr2 (64-105)||(14233745-14233786)
chr2 (64-111)||(26481116-26481163)
chr2 (63-105)||(6170634-6170676)
chr2 (63-105)||(6336256-6336298)
chr2 (63-105)||(7438572-7438614)
chr2 (63-105)||(8427556-8427598)
chr2 (63-105)||(9194433-9194475)
chr2 (63-105)||(12498661-12498703)
chr2 (63-105)||(15269865-15269907)
chr2 (63-105)||(18254235-18254276)
chr2 (63-105)||(24766156-24766198)
chr2 (63-105)||(30977893-30977935)
chr2 (63-105)||(39449142-39449184)
chr2 (63-105)||(41042258-41042299)
chr2 (63-105)||(45259310-45259352)
chr2 (64-105)||(37731226-37731267)
chr2 (64-105)||(38821370-38821411)
chr2 (64-104)||(8482127-8482167)
chr2 (65-105)||(14871851-14871891)
[»] scaffold0432 (1 HSPs)
scaffold0432 (63-105)||(6545-6587)
[»] chr4 (22 HSPs)
chr4 (63-105)||(2268533-2268574)
chr4 (63-105)||(2401614-2401656)
chr4 (63-105)||(37514157-37514199)
chr4 (63-105)||(51255750-51255792)
chr4 (70-105)||(2004221-2004256)
chr4 (64-106)||(2613508-2613550)
chr4 (63-105)||(2999116-2999158)
chr4 (63-105)||(5622462-5622503)
chr4 (63-105)||(5932789-5932831)
chr4 (63-105)||(9362703-9362745)
chr4 (63-105)||(21014058-21014100)
chr4 (63-105)||(23369358-23369399)
chr4 (63-105)||(32012900-32012942)
chr4 (63-105)||(37060321-37060363)
chr4 (63-105)||(37997260-37997301)
chr4 (63-105)||(38519797-38519839)
chr4 (63-105)||(42916654-42916696)
chr4 (63-105)||(51734658-51734700)
chr4 (63-105)||(56271364-56271406)
chr4 (64-105)||(14443202-14443243)
chr4 (70-111)||(14527642-14527683)
chr4 (64-105)||(37297053-37297093)
[»] scaffold1956 (1 HSPs)
scaffold1956 (63-105)||(775-817)
[»] scaffold0532 (1 HSPs)
scaffold0532 (63-105)||(10968-11010)
[»] scaffold0034 (1 HSPs)
scaffold0034 (63-105)||(101931-101973)
[»] scaffold0199 (1 HSPs)
scaffold0199 (63-112)||(8665-8713)


Alignment Details
Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 10360449 - 10360373
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||| |||| ||||||||| ||||||||    
T  10360449 taacattaaatcaatggcccttgttaaattgacctaagatggggaaatatgccaattttcccatgctaaacgttgcc 10360373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 33451360 - 33451284
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    ||||||||||||||||  ||||||||||||||||||||||||  ||||||||| ||||| |||||||| ||||||||    
T  33451360 taacattaaatcaatggcccttgttaaattgacctaagatggagaaatatgccaatttctccatgctaaacgttgcc 33451284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 16594401 - 16594443
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  16594401 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 16594443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 13563419 - 13563491
Alignment:
Q  114 attaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    ||||||||||||  ||||||||||||||| ||||||||  ||||||| | |||||||||||||| ||||||||    
T  13563419 attaaatcaatggcccttgttaaattgacttaagatggagaaatatgtcaatttccccatgctaaacgttgcc 13563491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 42249644 - 42249581
Alignment:
Q  114 attaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgcta 177  Q
    ||||||||||||| |||||||||||||||||||| | |||||||||  | |||| |||||||||    
T  42249644 attaaatcaatgacccttgttaaattgacctaagttaggaaaatatatcaatttgcccatgcta 42249581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 1293111 - 1293153
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  1293111 gttgtcacaaaagttgttaaaaaatggttgtacaaatatcatt 1293153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 4088489 - 4088447
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  4088489 gttgtcacaaaagttgttataaaatggatgtacaaatatcatt 4088447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 6517758 - 6517716
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  6517758 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 6517716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 8920124 - 8920082
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  8920124 gttgtcacaaaagttgtcacaaaatggatgttcaaatatcatt 8920082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 10649481 - 10649439
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  10649481 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 10649439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 13089807 - 13089849
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  13089807 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 13089849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 19522029 - 19522076
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattcta 111  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  19522029 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatttttcta 19522076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 21156031 - 21155991
Alignment:
Q  65 tgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  21156031 tgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 21155991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 105
Target Start/End: Original strand, 14062865 - 14062900
Alignment:
Q  70 caaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||| |||||||||||||||||    
T  14062865 caaaagttgttaaaaaatagatgttcaaatatcatt 14062900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 105
Target Start/End: Complemental strand, 43441777 - 43441742
Alignment:
Q  70 caaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||||||||||||||||||||||    
T  43441777 caaaagttgttacaaaatggatgttcaaatatcatt 43441742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 189728 - 189770
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  189728 gttgtcacaaaagttatcataaaatggatgttcaaatatcatt 189770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 7287215 - 7287257
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||    
T  7287215 gttgtcacaaaagttgtaaaaaaatggttgtttaaatatcatt 7287257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 10659098 - 10659140
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| |||||||||  ||||||||||||||||    
T  10659098 gttgtcacaaaagttattaaaaaattaatgttcaaatatcatt 10659140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 14011363 - 14011321
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||  |||||||||||||||    
T  14011363 gttgtcacaaaagttgttacaaaatgattgttcaaatatcatt 14011321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 14321980 - 14322022
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  14321980 gttgtcacaaaagttgttagaaaatggttgtacaaatatcatt 14322022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 16690545 - 16690503
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||| |||||| ||| |||||||||||    
T  16690545 gttgtcacaaaagttgttaagaaatggttgtacaaatatcatt 16690503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 18695364 - 18695322
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  18695364 gttgtcacaaaagttgttacaaaatggttgtacaaatatcatt 18695322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 19481207 - 19481249
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  19481207 gttgtcacaaaagttatcataaaatggatgttcaaatatcatt 19481249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 21922170 - 21922212
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||| ||||| | |||||||||||||||||||||||    
T  21922170 gttgtcacaaacgttgtcacaaaatggatgttcaaatatcatt 21922212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 22098301 - 22098259
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  22098301 gttgtcacaaaagttgttagaaaatggttgtacaaatatcatt 22098259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 24468315 - 24468353
Alignment:
Q  67 tcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  24468315 tcacaaaagttgtttaaaaatggttgttcaaatatcatt 24468353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 25603693 - 25603731
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatat 101  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  25603693 gttgtcacaaaagtcgttaaaaaatgaatgttcaaatat 25603731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 28306158 - 28306199
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  28306158 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 28306199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 30640836 - 30640794
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  30640836 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 30640794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 9581625 - 9581576
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattctaa 112  Q
    ||||||||||||||| | |  |||||||||||||||||||||| ||||||    
T  9581625 gttgtcacaaaagttatcactaaatggatgttcaaatatcatttttctaa 9581576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 17097828 - 17097869
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||| | ||||||||| |||||||||||||||    
T  17097828 ttgtcacaaaagttatcaaaaaatggttgttcaaatatcatt 17097869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 27487932 - 27487891
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||||| ||  |||||||||||||||    
T  27487932 ttgtcacaaaagttgttaaaaattgattgttcaaatatcatt 27487891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 32872924 - 32872965
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||||| | |||||||||||||||    
T  32872924 ttgtcacaaaagttgtcaaaaaatagttgttcaaatatcatt 32872965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 43214085 - 43214126
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||  ||||| |||||||||||||||||    
T  43214085 ttgtcacaaaagttgttgcaaaatagatgttcaaatatcatt 43214126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 2e-20; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 187
Target Start/End: Complemental strand, 33112362 - 33112284
Alignment:
Q  109 ctaacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcct 187  Q
    |||| |||||||||||||| ||| ||||||||||||||||| |||||||||||| |||||||||||||| || ||||||    
T  33112362 ctaatattaaatcaatgattcttattaaattgacctaagataggaaaatatgccaatttccccatgctaaacattgcct 33112284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 42841595 - 42841671
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    ||||||||||||||||| |  ||||||||||||||||||| ||||||||| || |||||||||||||| ||||||||    
T  42841595 taacattaaatcaatgaccgctgttaaattgacctaagataggaaaatataccaatttccccatgctaaacgttgcc 42841671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 45375228 - 45375152
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    ||||||||||||||||  ||||||||||||||||||||||||  ||||||| | |||||||||||||| ||||||||    
T  45375228 taacattaaatcaatggcccttgttaaattgacctaagatggagaaatatgtcaatttccccatgctaaacgttgcc 45375152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 1569485 - 1569409
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    |||||||||||||||   |||||||||||||| ||||||||| |||||||||| ||||||| |||||| | ||||||    
T  1569485 taacattaaatcaatagcccttgttaaattgatctaagatggaaaaatatgccaatttcccaatgctaaaggttgcc 1569409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 9549225 - 9549285
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattctaacattaaatcaat 124  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||||||| | ||||||    
T  9549225 ttgtcacaaaagttgtcacaaaatggatgttcaaatatcatttttctaacataatatcaat 9549285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 21514961 - 21515005
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    ||||||||||||| |||||||||||||||||||||||||||||||    
T  21514961 ggttgtcacaaaaattgttaaaaaatggatgttcaaatatcatta 21515005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 110
Target Start/End: Original strand, 31266263 - 31266306
Alignment:
Q  67 tcacaaaagttgttaaaaaatggatgttcaaatatcattattct 110  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  31266263 tcacaaaaattgttaaaaaatggatgttcaaatatcatttttct 31266306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 3946286 - 3946244
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  3946286 gttgtcacaaaagttgtcacaaaatggatgttcaaatatcatt 3946244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 4658288 - 4658330
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  4658288 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 4658330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 10839507 - 10839549
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  10839507 gttgtcacaaaagttgttaaaaattggttgttcaaatatcatt 10839549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 23754732 - 23754774
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| ||||||||||| |||||||||||||||    
T  23754732 gttgtcacaaaagttattaaaaaatggttgttcaaatatcatt 23754774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 25987812 - 25987854
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  25987812 gttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatt 25987854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 26026942 - 26026900
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  26026942 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 26026900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 33100494 - 33100536
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  33100494 gttgtcacaaaagttgttataaaatggttgttcaaatatcatt 33100536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 40649496 - 40649454
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| ||||||||||||| ||||||||||||||||    
T  40649496 gttgtcacaaaaattgttaaaaaatgaatgttcaaatatcatt 40649454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 5601013 - 5601054
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  5601013 ttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 5601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 5639607 - 5639566
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  5639607 ttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 5639566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 42620003 - 42620044
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  42620003 ttgtcacaaaagttgttagaaaatggatgtacaaatatcatt 42620044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 105
Target Start/End: Complemental strand, 7598751 - 7598712
Alignment:
Q  66 gtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  7598751 gtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 7598712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 12172142 - 12172189
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattct 110  Q
    |||||||||||| ||||| |||||||| ||||||||||||||| ||||    
T  12172142 gttgtcacaaaatttgtttaaaaatggttgttcaaatatcatttttct 12172189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 12416570 - 12416617
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattct 110  Q
    |||||||||||| ||||| |||||||| ||||||||||||||| ||||    
T  12416570 gttgtcacaaaatttgtttaaaaatggttgttcaaatatcatttttct 12416617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 67186 - 67228
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  67186 gttgtcacaaaagttgttagaaaatggttgtacaaatatcatt 67228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 1068652 - 1068610
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  1068652 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatt 1068610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 5771997 - 5772039
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||    
T  5771997 gttgttacaaaagttgtcaaaaaatggttgttcaaatatcatt 5772039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 6849195 - 6849153
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||    
T  6849195 gttgtcataaaagttgttagaaaatggctgttcaaatatcatt 6849153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 10644827 - 10644869
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  10644827 gttgtcacaaaagttgttacaaaatggttgtacaaatatcatt 10644869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 12707195 - 12707153
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||| |||||||||| | |||||||||||||||||||||||    
T  12707195 gttgtcgcaaaagttgtcataaaatggatgttcaaatatcatt 12707153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 13970965 - 13970923
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||  |||||||||| |||||||||||    
T  13970965 gttgtcacaaaagttgttaggaaatggatgtacaaatatcatt 13970923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 105
Target Start/End: Original strand, 14707373 - 14707411
Alignment:
Q  67 tcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  14707373 tcacaaaagttgtcaaaaaatgaatgttcaaatatcatt 14707411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 25830271 - 25830313
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  25830271 gttgtcacaaaagttgttagaaaatggttgtacaaatatcatt 25830313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 27325803 - 27325762
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  27325803 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 27325762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 29991458 - 29991416
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  29991458 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 29991416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 31596994 - 31596952
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||| | |||||||||||||||||||||||    
T  31596994 gttgtcacaaaaattgtcataaaatggatgttcaaatatcatt 31596952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 33279574 - 33279616
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||| |||||| ||| |||||||||||    
T  33279574 gttgtcacaaaagttgttaagaaatggttgtacaaatatcatt 33279616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 34718161 - 34718119
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  34718161 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 34718119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 35067206 - 35067164
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||| |||||| ||| |||||||||||    
T  35067206 gttgtcacaaaagttgttaagaaatggttgtacaaatatcatt 35067164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 41600355 - 41600313
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| || ||||| ||||||||||||||||    
T  41600355 gttgtcacaaaagttgtcaataaatgaatgttcaaatatcatt 41600313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 44061763 - 44061721
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| | ||||||||| |||||||||||||||    
T  44061763 gttgtcacaaaagttatcaaaaaatggttgttcaaatatcatt 44061721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 18651415 - 18651374
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||  |||| |||||||||||||||||    
T  18651415 ttgtcacaaaagttgttaccaaatagatgttcaaatatcatt 18651374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 22719484 - 22719444
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  22719484 ttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 22719444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 23793115 - 23793156
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcat 104  Q
    ||||||||| ||||||| | ||||||||||||||||||||||    
T  23793115 gttgtcacataagttgtcacaaaatggatgttcaaatatcat 23793156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 31249551 - 31249591
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  31249551 ttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 31249591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 34435763 - 34435804
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||| ||| |||||||||||||||    
T  34435763 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatt 34435804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 42733591 - 42733632
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||| ||||| |||||||| |||||||||||||||    
T  42733591 ttgtcacaaaaattgtttaaaaatggttgttcaaatatcatt 42733632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 43161964 - 43161891
Alignment:
Q  114 attaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcct 187  Q
    ||||||||||||| ||||||||||||||| |||| | || ||||||  | |||| ||||||||| || ||||||    
T  43161964 attaaatcaatgacccttgttaaattgacttaagttagggaaatatatcaatttgcccatgctaaacattgcct 43161891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 3e-19; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 45811900 - 45811840
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccc 170  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||    
T  45811900 taacattaaatcaatgacccttgttaaatcgacctaagatgggaaaatatgccaatttccc 45811840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 1884059 - 1883982
Alignment:
Q  109 ctaacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    |||| |||||||||||| ||||| ||||||||||||||||||||||||||| || |||||| ||||||| || |||||    
T  1884059 ctaatattaaatcaatggtccttattaaattgacctaagatgggaaaatataccaatttccgcatgctaaacattgcc 1883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 52129014 - 52128937
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcct 187  Q
    ||||||||||||||||  |||||||||||||| |||||||||  ||||||||| |||| ||||||||| |||||||||    
T  52129014 taacattaaatcaatggcccttgttaaattgatctaagatggagaaatatgccaattttcccatgctaaacgttgcct 52128937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 18982566 - 18982522
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  18982566 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 18982522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 103
Target Start/End: Complemental strand, 36775153 - 36775112
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  36775153 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatca 36775112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 47215316 - 47215392
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcct 187  Q
    ||||||||||||||||| | ||||||||||||||||| || || ||||||||| |||||||| ||||| |||||||||    
T  47215316 taacattaaatcaatgacctttgttaaattgacctaaaatagg-aaatatgccaatttccccgtgctaaacgttgcct 47215392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 36775114 - 36775070
Alignment:
Q  67 tcacaaaagttgttaaaaaatggatgttcaaatatcattattcta 111  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  36775114 tcacaaaagttgttaaaaaatggatgttcaaatatcattactcta 36775070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 46859464 - 46859421
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  46859464 gttgtcacaaaagttgttaaaaaatggatgctcaaatatcatta 46859421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 52714927 - 52714968
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  52714927 ttgtcacaaaagttgttataaaatggatgttcaaatatcatt 52714968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 649814 - 649772
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  649814 gttgtcacaaaagttgtaaaaaaatggttgttcaaatatcatt 649772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 9566986 - 9567028
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  9566986 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 9567028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 10890071 - 10890113
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  10890071 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 10890113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 13489708 - 13489666
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  13489708 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 13489666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 15705087 - 15705129
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  15705087 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 15705129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 19947766 - 19947808
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  19947766 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 19947808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 48983693 - 48983735
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  48983693 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 48983735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 52362528 - 52362486
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  52362528 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 52362486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 49020430 - 49020471
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  49020430 ttgtcacaaaagttgttaaaaaatggttgtacaaatatcatt 49020471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 2571680 - 2571639
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  2571680 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 2571639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 3159421 - 3159380
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  3159421 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 3159380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 4213118 - 4213076
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| | ||||||||| |||||||||||||||    
T  4213118 gttgtcacaaaagttatcaaaaaatggttgttcaaatatcatt 4213076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 8350222 - 8350263
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  8350222 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 8350263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 9987997 - 9987955
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  9987997 gttgtcacaaaagttgtcaaaaattggttgttcaaatatcatt 9987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 21433426 - 21433468
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  21433426 gttgtcacaaaagttgttacaaaatggttgtacaaatatcatt 21433468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 27742663 - 27742621
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  27742663 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatt 27742621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 30467551 - 30467593
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||  |||||||||||||||    
T  30467551 gttgtcacaaaagttgtcaaaaaatgactgttcaaatatcatt 30467593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 30658873 - 30658915
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  30658873 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 30658915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 30735319 - 30735360
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  30735319 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 30735360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 32915097 - 32915139
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | ||||| |||||||||||||||||    
T  32915097 gttgtcacaaaagttgtcataaaatagatgttcaaatatcatt 32915139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 34008226 - 34008184
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | ||||| |||||||||||||||||    
T  34008226 gttgtcacaaaagttgtcataaaatagatgttcaaatatcatt 34008184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 37685376 - 37685335
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  37685376 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 37685335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 37700142 - 37700183
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  37700142 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 37700183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 44789168 - 44789210
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  44789168 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 44789210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 47214254 - 47214212
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | ||||| |||||||||||||||||    
T  47214254 gttgtcacaaaagttgtcataaaatagatgttcaaatatcatt 47214212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 47642632 - 47642674
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| | ||||||||| |||||||||||||||    
T  47642632 gttgtcacaaaagttatcaaaaaatggttgttcaaatatcatt 47642674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 47820526 - 47820568
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  47820526 gttgtaacaaaagttgtcataaaatggatgttcaaatatcatt 47820568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 48858869 - 48858827
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  48858869 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatt 48858827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 49570042 - 49570000
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||  |||||||||| |||||||||||    
T  49570042 gttgtcacaaaagttgttaggaaatggatgtacaaatatcatt 49570000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 49931599 - 49931557
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  49931599 gttgtcacaaaagttgttaaaaaatgattgtacaaatatcatt 49931557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 43893302 - 43893261
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||| ||||||||| | |||||||||||||||||||||||    
T  43893302 ttgtcataaaagttgtgacaaaatggatgttcaaatatcatt 43893261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 8e-17; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 47077210 - 47077134
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    ||||||||||||||||  ||||| |||||||||||||||| || ||||||| | |||||||||||||| ||||||||    
T  47077210 taacattaaatcaatggcccttgataaattgacctaagatagggaaatatgtcaatttccccatgctaaacgttgcc 47077134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 2819300 - 2819253
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattc 109  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||    
T  2819300 ggttgtcataaaagttgttaaaaaatggatgttcaaatatcattattc 2819253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 106
Target Start/End: Original strand, 48814832 - 48814876
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    ||||||||||||||||||||||||||| |||||||||||||||||    
T  48814832 ggttgtcacaaaagttgttaaaaaatgaatgttcaaatatcatta 48814876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 36106048 - 36105972
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    |||||||||||||||    |||||||||||||||||||||| | ||||||||| ||||| |||||||| || |||||    
T  36106048 taacattaaatcaatagctcttgttaaattgacctaagatgaggaaatatgccaatttctccatgctaaacattgcc 36105972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 12007211 - 12007253
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  12007211 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 12007253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 37899369 - 37899327
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  37899369 gttgtcacaaaagttgtcacaaaatggatgttcaaatatcatt 37899327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 41893961 - 41893919
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  41893961 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 41893919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 43159600 - 43159642
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||||||||||||| |||||||||||||||    
T  43159600 gttgtcacaaaaattgttaaaaaatggttgttcaaatatcatt 43159642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 47448872 - 47448830
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  47448872 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 47448830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 33057425 - 33057376
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattctaa 112  Q
    ||||| ||||||||||||||||||| | ||||||||||||||| ||||||    
T  33057425 gttgttacaaaagttgttaaaaaatagttgttcaaatatcatttttctaa 33057376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 186
Target Start/End: Complemental strand, 11993133 - 11993061
Alignment:
Q  114 attaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    ||||||||||||| |||| ||||||||||||||| |||| ||||||  | | || ||||||||| ||||||||    
T  11993133 attaaatcaatgacccttattaaattgacctaagttggggaaatatatcaacttgcccatgctatacgttgcc 11993061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 40077391 - 40077434
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||| |||||||||||| |||||| |||||||||||||||    
T  40077391 ggttgtcataaaagttgttaacaaatggttgttcaaatatcatt 40077434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 2008883 - 2008925
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  2008883 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatt 2008925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 19223485 - 19223443
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||||||||| | |||||||||||||||||    
T  19223485 gttgtcacaaaaattgttaaaaagtagatgttcaaatatcatt 19223443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 30941431 - 30941390
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  30941431 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 30941390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 32777732 - 32777774
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||    
T  32777732 gttgtcataaaagttgtcaaaaaatggttgttcaaatatcatt 32777774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 35586798 - 35586840
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  35586798 gttgtcacaaaagttatcataaaatggatgttcaaatatcatt 35586840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 37899238 - 37899280
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||| | |||||||||||||||||||||||    
T  37899238 gttgtcacaaaaattgtcacaaaatggatgttcaaatatcatt 37899280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 44895598 - 44895639
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  44895598 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 44895639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 104
Target Start/End: Original strand, 12651333 - 12651374
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcat 104  Q
    ||||| |||||||||||| ||||||| |||||||||||||||    
T  12651333 gttgttacaaaagttgttgaaaaatgaatgttcaaatatcat 12651374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 22638910 - 22638951
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| | ||||| |||||||||||||||||    
T  22638910 ttgtcacaaaagttgtcataaaatagatgttcaaatatcatt 22638951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 23910277 - 23910318
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  23910277 ttgtcacaaaagttgtcaaaaaatggttgtacaaatatcatt 23910318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 100
Target Start/End: Complemental strand, 31445363 - 31445326
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaata 100  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  31445363 gttgtcacaaaagttgtcaaaaaatggttgttcaaata 31445326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 72 - 105
Target Start/End: Complemental strand, 35293165 - 35293132
Alignment:
Q  72 aaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||| |||||||||||||||||||||||||    
T  35293165 aaagttgtcaaaaaatggatgttcaaatatcatt 35293132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 40854681 - 40854722
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||| ||||||||||| || ||||||||    
T  40854681 ttgtcacaaaagttgttagaaaatggatgtacagatatcatt 40854722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 62 - 106
Target Start/End: Complemental strand, 37143168 - 37143124
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  37143168 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 37143124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 31425579 - 31425537
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31425579 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 31425537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 106
Target Start/End: Original strand, 31931045 - 31931087
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  31931045 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 31931087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 48353042 - 48353000
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  48353042 gttgtcacaaaagttgttaaaaaatggatgtacaaatatcatt 48353000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 49875842 - 49875800
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  49875842 gttgtcacaaaagttgttaaaaaatggatgttaaaatatcatt 49875800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 187
Target Start/End: Original strand, 53829255 - 53829328
Alignment:
Q  114 attaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcct 187  Q
    ||||||||||||  |||| ||||||||| |||||||||  ||||||||| |||||||||||||| ||| |||||    
T  53829255 attaaatcaatggcccttattaaattgatctaagatggagaaatatgccaatttccccatgctaaacgctgcct 53829328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 50886238 - 50886183
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattctaacattaaa 119  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||    
T  50886238 gttgtcacaaaagttgttaaaaa-tggatgatcaaatatcattactctaacaataaa 50886183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 15927620 - 15927663
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||    
T  15927620 gttgttacaaaagttgttaaaaaatggatgttcaaatattatta 15927663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 31350631 - 31350673
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| ||||||||||||||||||| ||||||||||    
T  31350631 gttgtcacaaaaattgttaaaaaatggatgttaaaatatcatt 31350673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 72 - 106
Target Start/End: Complemental strand, 31664661 - 31664627
Alignment:
Q  72 aaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    |||||||||||||||||||||||||||||||||||    
T  31664661 aaagttgttaaaaaatggatgttcaaatatcatta 31664627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 49021757 - 49021715
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| ||||||||||||||| |||||||||||    
T  49021757 gttgtcacaaaagttattaaaaaatggatgtacaaatatcatt 49021715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 55400045 - 55400003
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  55400045 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 55400003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 33976420 - 33976461
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||| ||||||||||| |||||||||||||||||||||||    
T  33976420 ttgtcataaaagttgttacaaaatggatgttcaaatatcatt 33976461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 34267729 - 34267806
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcct 187  Q
    |||||||||||||||   |||||||||||||| | |||||||  ||||||||| |||| ||||| ||| |||||||||    
T  34267729 taacattaaatcaatagcccttgttaaattgatcaaagatggagaaatatgccaattttcccatactaaacgttgcct 34267806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 52963342 - 52963383
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||||||||| ||| |||||||||||    
T  52963342 ttgtcacaaaagttgttaaaaaatggttgtacaaatatcatt 52963383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 10811181 - 10811130
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattctaaca 114  Q
    ||||||||||||||||| | ||||||| |||||||||||||||  |||||||    
T  10811181 gttgtcacaaaagttgtcataaaatggttgttcaaatatcatttctctaaca 10811130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 9862579 - 9862537
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||  ||||||||| |||||||||||||||    
T  9862579 gttgtcacaaaagttgacaaaaaatggttgttcaaatatcatt 9862537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 14207283 - 14207325
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||| | |||||||||||||||    
T  14207283 gttgtcacaaaagttgttacaaaatcgttgttcaaatatcatt 14207325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 14215031 - 14215073
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||| | |||||||||||||||    
T  14215031 gttgtcacaaaagttgttacaaaatcgttgttcaaatatcatt 14215073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 19150344 - 19150386
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||||||||||  ||| |||||||||||    
T  19150344 gttgtcacaaaagttgttaaaaaatgattgtacaaatatcatt 19150386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 21196170 - 21196128
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||| ||||||| | |||||||||||||||||||||||    
T  21196170 gttgtcacagaagttgtcacaaaatggatgttcaaatatcatt 21196128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 26014857 - 26014816
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  26014857 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 26014816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 27168707 - 27168749
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| || ||||||||||| |||||||||||||||    
T  27168707 gttgtcacaaaaattattaaaaaatggttgttcaaatatcatt 27168749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 29573381 - 29573423
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  29573381 gttgtcacaaaagttgttacaaaatggttgtacaaatatcatt 29573423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 31376790 - 31376832
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  31376790 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 31376832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 32362979 - 32362937
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||    
T  32362979 gttgtcataaaagttgtcaaaaaatggttgttcaaatatcatt 32362937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 34057978 - 34058020
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  34057978 gttgtcacaaaagttatcataaaatggatgttcaaatatcatt 34058020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 37894268 - 37894310
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  37894268 gttgtcacaaaagttgttagaaaatggttgtacaaatatcatt 37894310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 37927230 - 37927272
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  37927230 gttgtcacaaaagttgtcaccaaatggatgttcaaatatcatt 37927272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 42357106 - 42357147
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  42357106 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 42357147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 45055020 - 45054978
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  45055020 gttgtaacaaaagttgtcagaaaatggatgttcaaatatcatt 45054978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 46623952 - 46623911
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  46623952 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 46623911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 47472374 - 47472333
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  47472374 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 47472333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 49167796 - 49167754
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  49167796 gttgtcacaaaagttgtcatcaaatggatgttcaaatatcatt 49167754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 49417621 - 49417579
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | ||||| |||||||||||||||||    
T  49417621 gttgtcacaaaagttgtcataaaatagatgttcaaatatcatt 49417579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 52939698 - 52939657
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  52939698 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 52939657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 54099382 - 54099420
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatat 101  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  54099382 gttgtcacaaaagttgttagaaaatggatgtacaaatat 54099420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 39629863 - 39629908
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcattat 107  Q
    |||||||||||||||||| ||||||| | ||| |||||||||||||    
T  39629863 ggttgtcacaaaagttgtaaaaaaatagttgtacaaatatcattat 39629908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 187
Target Start/End: Complemental strand, 44450034 - 44449961
Alignment:
Q  114 attaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcct 187  Q
    ||||||||||||  |||||||||||||| ||||| |||| ||||||  | | || ||||||||| |||||||||    
T  44450034 attaaatcaatggcccttgttaaattgatctaagttggggaaatatatcaacttgcccatgctaaacgttgcct 44449961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 46960688 - 46960613
Alignment:
Q  110 taacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttccccatgctacacgttgcc 186  Q
    ||||||||||||||||  | || |||||||| || |||||| | ||||||||| |||| ||||||||| ||||||||    
T  46960688 taacattaaatcaatggcctttattaaattggccaaagatgaggaaatatgccaattt-cccatgctaaacgttgcc 46960613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 63 - 106
Target Start/End: Original strand, 28982664 - 28982707
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28982664 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 28982707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 30239225 - 30239162
Alignment:
Q  109 ctaacattaaatcaatgatccttgttaaattgacctaagatgggaaaatatgccgatttcccca 172  Q
    |||| |||||||||||||||||  |||||||||||||||||||||||||||| | |||||||||    
T  30239225 ctaatattaaatcaatgatcctcattaaattgacctaagatgggaaaatatgtcaatttcccca 30239162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 5456875 - 5456919
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattat 107  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  5456875 gttgtcacaaaagttgttaaaaaatgaatgttcaaatatcattat 5456919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 354322 - 354279
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  354322 gttgtcacaaaagttgttaaaaaatggatgttcaaacatcatta 354279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 105
Target Start/End: Original strand, 34383882 - 34383925
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||    
T  34383882 ggttgtcacaaaaattgttaaaaaatgaatgttcaaatatcatt 34383925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 15368848 - 15368890
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||||| |||||||||||||||||||||||    
T  15368848 gttgtaacaaaagttgttacaaaatggatgttcaaatatcatt 15368890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 20822893 - 20822935
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  20822893 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 20822935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 24900821 - 24900779
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  24900821 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 24900779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 32459542 - 32459584
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  32459542 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 32459584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 5739789 - 5739829
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatca 103  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  5739789 gttgtcacaaaagttgttaaaaaatagttgttcaaatatca 5739829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 105
Target Start/End: Original strand, 3552182 - 3552221
Alignment:
Q  66 gtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||||||| ||| |||||||||||    
T  3552182 gtcacaaaagttgttaaaaaatggttgtacaaatatcatt 3552221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 62 - 105
Target Start/End: Complemental strand, 32046745 - 32046702
Alignment:
Q  62 ggttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||    
T  32046745 ggttgtcacataagttgttacaaaattgatgttcaaatatcatt 32046702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 8098621 - 8098662
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  8098621 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 8098662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 8505799 - 8505841
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||  |||||||||||||||    
T  8505799 gttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatt 8505841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 11635560 - 11635602
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||  |||||||||||||||    
T  11635560 gttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatt 11635602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 15318213 - 15318255
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  15318213 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 15318255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 17551404 - 17551446
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| ||||||||| |||||||||||||||    
T  17551404 gttgttacaaaagttgtcaaaaaatggttgttcaaatatcatt 17551446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 22079589 - 22079630
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  22079589 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 22079630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 25811864 - 25811905
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  25811864 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 25811905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 33421806 - 33421764
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  33421806 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 33421764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 33712366 - 33712324
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  33712366 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatt 33712324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 34047432 - 34047391
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  34047432 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 34047391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Original strand, 23632664 - 23632704
Alignment:
Q  65 tgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| |||| ||| |||||||||||||||    
T  23632664 tgtcacaaaagttgtttaaaagtggttgttcaaatatcatt 23632704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 110
Target Start/End: Original strand, 22526019 - 22526066
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattct 110  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  22526019 gttgtcacaaaaattgtcaaaaaatggatgttcaaatatcatttttct 22526066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 2563750 - 2563708
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  2563750 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 2563708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 6999093 - 6999135
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  6999093 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 6999135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 13765446 - 13765404
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  13765446 gttgtcacaaaagttgtcataaaatggatgttcaaatatcatt 13765404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 18737899 - 18737941
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  18737899 gttgtcacaaaagttgttaaaaaatggatatacaaatatcatt 18737941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 43057110 - 43057068
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||||||| ||| |||||||||||||||    
T  43057110 gttgtcacaaaagttgttaaaaagtggttgttcaaatatcatt 43057068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 14233745 - 14233786
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  14233745 ttgtcacaaaagttgtcacaaaatggatgttcaaatatcatt 14233786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 64 - 111
Target Start/End: Original strand, 26481116 - 26481163
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattcta 111  Q
    ||||||||||||||||||||||||   ||||||||||||||| |||||    
T  26481116 ttgtcacaaaagttgttaaaaaataattgttcaaatatcatttttcta 26481163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 6170676 - 6170634
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||| ||||||||||    
T  6170676 gttgtcacaaaagttgtcataaaatggatgttgaaatatcatt 6170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 6336298 - 6336256
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||    
T  6336298 gttgtcacaaaagttgttagaaaatggttgtacaaatatcatt 6336256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 7438614 - 7438572
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||| |||||||||| |||||||| |||||||||||||||    
T  7438614 gttgtcataaaagttgtttaaaaatggttgttcaaatatcatt 7438572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 8427598 - 8427556
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||| ||||||| |||||||||||||||||    
T  8427598 gttgtcacaaaaattgtcaaaaaatagatgttcaaatatcatt 8427556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 9194475 - 9194433
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||| ||||||||| | |||||||||||||||||||||||    
T  9194475 gttgtcataaaagttgtcacaaaatggatgttcaaatatcatt 9194433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 12498661 - 12498703
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| ||||||  ||||||||||||||||||||||    
T  12498661 gttgtcacaaaaattgttaccaaatggatgttcaaatatcatt 12498703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 15269907 - 15269865
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||| | |||||||||||||||||||||||    
T  15269907 gttgtcacaaaaattgtcataaaatggatgttcaaatatcatt 15269865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 18254235 - 18254276
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  18254235 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 18254276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 24766198 - 24766156
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||    
T  24766198 gttgtcacaaaagttattaaaaaatggttgtacaaatatcatt 24766156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 30977935 - 30977893
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||| ||||||||| | |||||||||||||||||||||||    
T  30977935 gttgtcataaaagttgtcacaaaatggatgttcaaatatcatt 30977893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 39449142 - 39449184
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||| ||||||||||| | |||||||||||||||||||||||    
T  39449142 gttgtaacaaaagttgtcacaaaatggatgttcaaatatcatt 39449184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 41042299 - 41042258
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||| |||||||||||||||    
T  41042299 gttgtcacaaaagttgtta-aaaatggttgttcaaatatcatt 41042258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 45259310 - 45259352
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||||| ||||||||||| |||||||||||    
T  45259310 gttgtcacaaaaattgttagaaaatggatgtacaaatatcatt 45259352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 37731226 - 37731267
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||| ||| |||||||||||||||    
T  37731226 ttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatt 37731267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 38821411 - 38821370
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| | ||||||| |||||||||||||||    
T  38821411 ttgtcacaaaagttgtcataaaatggttgttcaaatatcatt 38821370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 104
Target Start/End: Complemental strand, 8482167 - 8482127
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcat 104  Q
    ||||||||||||||||||  |||||| ||||||||||||||    
T  8482167 ttgtcacaaaagttgttagtaaatggttgttcaaatatcat 8482127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 14871891 - 14871851
Alignment:
Q  65 tgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| ||||||||| |||||| ||||||||    
T  14871891 tgtcacaaaagttgtcaaaaaatggttgttcacatatcatt 14871851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 6545 - 6587
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||||||||||  |||||||||||||||    
T  6545 gttgtcacaaaagttgttaaaaaatgattgttcaaatatcatt 6587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000007; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 2268533 - 2268574
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  2268533 gttgtcacaaaagttgttaaaa-atggatgttcaaatatcatt 2268574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 2401656 - 2401614
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| | |||||||||||||||||||||||    
T  2401656 gttgtcacaaaagttgtcacaaaatggatgttcaaatatcatt 2401614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 37514157 - 37514199
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  37514157 gttgtcacaaaagttgttacaaaatggatgtacaaatatcatt 37514199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 51255792 - 51255750
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  51255792 gttgtcacaaaagttgtcaaaaaatggttgttcaaatatcatt 51255750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 70 - 105
Target Start/End: Original strand, 2004221 - 2004256
Alignment:
Q  70 caaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||||| |||||||||||||||    
T  2004221 caaaagttgttaaaaaatggttgttcaaatatcatt 2004256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 2613550 - 2613508
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatta 106  Q
    ||||||||||||||||||  |||||| ||||||||||||||||    
T  2613550 ttgtcacaaaagttgttatcaaatggttgttcaaatatcatta 2613508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 2999158 - 2999116
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||| | |||||||||||||||||||||||    
T  2999158 gttgtcacaaaaattgtcataaaatggatgttcaaatatcatt 2999116  T

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Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 5622503 - 5622462
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  5622503 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 5622462  T

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Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 5932789 - 5932831
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  5932789 gttgtcacaaaagttgtcaaaaagtggttgttcaaatatcatt 5932831  T

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Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 9362703 - 9362745
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| |  ||||||||||||||||||||||    
T  9362703 gttgtcacaaaagttgtcattaaatggatgttcaaatatcatt 9362745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 21014100 - 21014058
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||  |||||||||||||||    
T  21014100 gttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatt 21014058  T

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Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 23369358 - 23369399
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  23369358 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 23369399  T

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Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 32012942 - 32012900
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||| ||| |||||||||||||||    
T  32012942 gttgtcacaaaagttgtcaaaaattggttgttcaaatatcatt 32012900  T

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Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 37060363 - 37060321
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||    
T  37060363 gttgtcacaaaagttgtcaaaaaatggttgttcaaataacatt 37060321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 37997301 - 37997260
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||||||||||||    
T  37997301 gttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 37997260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 38519839 - 38519797
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| |||| ||||||||| |||||||||||||||    
T  38519839 gttgtcacaaaaattgtcaaaaaatggttgttcaaatatcatt 38519797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 42916696 - 42916654
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||| |||||||||||||| ||||||| |||||||||||||||    
T  42916696 gttgacacaaaagttgttataaaatggttgttcaaatatcatt 42916654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 51734658 - 51734700
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||| |||| ||| |||||||||||||||    
T  51734658 gttgtcacaaaagttgtttaaaagtggttgttcaaatatcatt 51734700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 56271406 - 56271364
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||| | | |||||||||||||||||||||||    
T  56271406 gttgtcacaaaagttatcataaaatggatgttcaaatatcatt 56271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 14443243 - 14443202
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||||||  |||||||||||||||    
T  14443243 ttgtcacaaaagttgtcaaaaaatgattgttcaaatatcatt 14443202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 14527683 - 14527642
Alignment:
Q  70 caaaagttgttaaaaaatggatgttcaaatatcattattcta 111  Q
    |||||||||| | ||||||||||||||||||||||| |||||    
T  14527683 caaaagttgtcacaaaatggatgttcaaatatcatttttcta 14527642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 105
Target Start/End: Complemental strand, 37297093 - 37297053
Alignment:
Q  64 ttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  37297093 ttgtcacaaaagttgt-aaaaaatggttgttcaaatatcatt 37297053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1956 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1956
Description:

Target: scaffold1956; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 817 - 775
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||| || | |||||||||||||||||||||||||    
T  817 gttgtcacaaaaattatcaaaaaatggatgttcaaatatcatt 775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Complemental strand, 11010 - 10968
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    |||||||||||||||||   |||||||||||||||||||||||    
T  11010 gttgtcacaaaagttgtcccaaaatggatgttcaaatatcatt 10968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 101931 - 101973
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcatt 105  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||    
T  101931 gttgtcacaaaagttgtcaaaaaatggttgttcagatatcatt 101973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 8713 - 8665
Alignment:
Q  63 gttgtcacaaaagttgttaaaaaatggatgttcaaatatcattattctaa 112  Q
    ||||||||||||||||| ||||||||  ||||||||||||||| ||||||    
T  8713 gttgtcacaaaagttgt-aaaaaatgattgttcaaatatcatttttctaa 8665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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