View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19190_low_5 (Length: 417)

Name: NF19190_low_5
Description: NF19190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19190_low_5
NF19190_low_5
[»] chr7 (54 HSPs)
chr7 (1-400)||(140027-140426)
chr7 (1-176)||(10584269-10584450)
chr7 (16-176)||(10648713-10648871)
chr7 (91-167)||(8293920-8293996)
chr7 (5-156)||(18495521-18495672)
chr7 (45-167)||(1872930-1873051)
chr7 (88-173)||(18662578-18662663)
chr7 (39-161)||(5797659-5797782)
chr7 (90-175)||(3734732-3734817)
chr7 (89-172)||(13418660-13418744)
chr7 (116-176)||(14195876-14195936)
chr7 (69-166)||(4785985-4786084)
chr7 (70-176)||(7397276-7397383)
chr7 (83-172)||(8877559-8877650)
chr7 (88-167)||(2563961-2564042)
chr7 (119-176)||(8313299-8313356)
chr7 (88-176)||(17153029-17153118)
chr7 (88-172)||(20582394-20582479)
chr7 (90-172)||(1848105-1848188)
chr7 (106-165)||(6006084-6006143)
chr7 (88-167)||(5108708-5108789)
chr7 (96-176)||(4579232-4579312)
chr7 (88-167)||(18368854-18368934)
chr7 (137-176)||(7318408-7318447)
chr7 (88-163)||(21501413-21501487)
chr7 (96-167)||(31493070-31493141)
chr7 (130-172)||(7492181-7492223)
chr7 (88-165)||(8053938-8054016)
chr7 (135-176)||(1587817-1587858)
chr7 (88-172)||(13277630-13277715)
chr7 (44-101)||(21884988-21885045)
chr7 (180-237)||(27796968-27797025)
chr7 (193-237)||(5189455-5189499)
chr7 (131-175)||(10586943-10586987)
chr7 (119-167)||(17829713-17829761)
chr7 (182-237)||(7570641-7570696)
chr7 (182-237)||(7577056-7577111)
chr7 (88-167)||(9574551-9574630)
chr7 (98-173)||(11221051-11221126)
chr7 (180-231)||(18973681-18973732)
chr7 (130-172)||(19153434-19153476)
chr7 (70-161)||(20174729-20174821)
chr7 (130-172)||(20752833-20752875)
chr7 (51-101)||(26134563-26134613)
chr7 (88-172)||(6042589-6042674)
chr7 (88-172)||(9131049-9131134)
chr7 (193-238)||(44672786-44672831)
chr7 (193-229)||(1636700-1636736)
chr7 (98-172)||(3329542-3329618)
chr7 (88-167)||(4449111-4449191)
chr7 (46-102)||(10339524-10339580)
chr7 (88-167)||(11803212-11803292)
chr7 (52-120)||(14754974-14755042)
chr7 (106-173)||(16297727-16297795)
[»] chr4 (30 HSPs)
chr4 (1-165)||(12761390-12761554)
chr4 (11-143)||(20315168-20315298)
chr4 (96-172)||(26115789-26115865)
chr4 (88-175)||(25121102-25121189)
chr4 (94-176)||(17672137-17672219)
chr4 (119-176)||(17951203-17951260)
chr4 (119-176)||(17955055-17955112)
chr4 (122-176)||(12578176-12578230)
chr4 (88-172)||(13908992-13909078)
chr4 (27-165)||(3774975-3775104)
chr4 (88-167)||(17709897-17709977)
chr4 (88-176)||(19092430-19092518)
chr4 (120-176)||(21323784-21323840)
chr4 (94-176)||(19374694-19374776)
chr4 (87-165)||(24639335-24639415)
chr4 (130-176)||(14649029-14649075)
chr4 (119-172)||(15164904-15164958)
chr4 (34-120)||(22526555-22526641)
chr4 (91-172)||(11521073-11521153)
chr4 (52-120)||(9052865-9052933)
chr4 (130-172)||(16730318-16730361)
chr4 (88-173)||(19562050-19562137)
chr4 (135-173)||(5679343-5679381)
chr4 (119-172)||(17216958-17217012)
chr4 (130-167)||(19929593-19929630)
chr4 (193-234)||(54900088-54900129)
chr4 (207-239)||(12706001-12706033)
chr4 (88-166)||(17026219-17026299)
chr4 (44-161)||(19900727-19900845)
chr4 (116-167)||(20829642-20829694)
[»] chr1 (34 HSPs)
chr1 (11-173)||(32382807-32382969)
chr1 (1-176)||(22620397-22620573)
chr1 (91-172)||(34481108-34481189)
chr1 (89-173)||(22664345-22664429)
chr1 (72-176)||(28008240-28008344)
chr1 (69-174)||(15807877-15807982)
chr1 (88-173)||(18100889-18100974)
chr1 (78-172)||(9401644-9401739)
chr1 (88-166)||(12208746-12208825)
chr1 (90-172)||(29242645-29242728)
chr1 (119-176)||(16360006-16360063)
chr1 (87-176)||(33190812-33190901)
chr1 (90-176)||(17121378-17121464)
chr1 (83-172)||(22623029-22623119)
chr1 (88-176)||(9787754-9787843)
chr1 (92-167)||(17610135-17610212)
chr1 (69-176)||(12012671-12012777)
chr1 (91-167)||(16069440-16069517)
chr1 (99-172)||(16787614-16787687)
chr1 (193-237)||(21911039-21911083)
chr1 (91-172)||(21987872-21987955)
chr1 (88-172)||(16916821-16916907)
chr1 (87-167)||(21449220-21449302)
chr1 (193-231)||(25662856-25662894)
chr1 (88-172)||(18825782-18825867)
chr1 (130-167)||(21973124-21973161)
chr1 (180-237)||(28957314-28957371)
chr1 (119-172)||(51473783-51473836)
chr1 (98-172)||(16179144-16179220)
chr1 (66-138)||(17017568-17017639)
chr1 (116-167)||(23037915-23037967)
chr1 (88-144)||(24214705-24214761)
chr1 (193-229)||(28138611-28138647)
chr1 (193-229)||(28141861-28141897)
[»] chr6 (34 HSPs)
chr6 (11-176)||(23645566-23645731)
chr6 (91-176)||(25927184-25927269)
chr6 (16-175)||(22565966-22566125)
chr6 (88-176)||(12183206-12183294)
chr6 (89-172)||(27737565-27737649)
chr6 (110-167)||(24252128-24252185)
chr6 (83-167)||(24657339-24657424)
chr6 (91-159)||(19244726-19244794)
chr6 (88-172)||(24215615-24215699)
chr6 (88-167)||(27124370-27124450)
chr6 (88-167)||(2586862-2586941)
chr6 (69-172)||(21672291-21672394)
chr6 (69-172)||(21679707-21679810)
chr6 (131-176)||(8241410-8241455)
chr6 (119-176)||(9838491-9838548)
chr6 (39-120)||(28585858-28585939)
chr6 (132-176)||(28933580-28933624)
chr6 (97-167)||(22813605-22813676)
chr6 (90-164)||(24475202-24475277)
chr6 (70-140)||(9726194-9726263)
chr6 (87-172)||(23844339-23844425)
chr6 (119-172)||(25781916-25781970)
chr6 (90-163)||(1635110-1635183)
chr6 (135-176)||(15466505-15466546)
chr6 (193-237)||(965070-965114)
chr6 (96-164)||(4339882-4339950)
chr6 (119-175)||(9898868-9898923)
chr6 (106-165)||(17382214-17382274)
chr6 (193-237)||(17733248-17733292)
chr6 (193-229)||(27316184-27316220)
chr6 (91-176)||(6630569-6630656)
chr6 (91-165)||(22412940-22413015)
chr6 (138-167)||(21907578-21907607)
chr6 (139-172)||(22410256-22410289)
[»] chr5 (36 HSPs)
chr5 (11-172)||(24260655-24260816)
chr5 (11-161)||(24851971-24852121)
chr5 (13-167)||(15470083-15470236)
chr5 (70-176)||(36175268-36175374)
chr5 (55-173)||(24265317-24265436)
chr5 (55-173)||(24341948-24342067)
chr5 (88-172)||(20744545-20744630)
chr5 (70-167)||(26121181-26121279)
chr5 (91-167)||(17432026-17432103)
chr5 (116-176)||(18937882-18937943)
chr5 (180-237)||(31375919-31375976)
chr5 (116-176)||(17171458-17171518)
chr5 (88-167)||(17314988-17315068)
chr5 (51-167)||(17635422-17635537)
chr5 (88-167)||(24245419-24245499)
chr5 (44-161)||(26307761-26307879)
chr5 (83-172)||(16523673-16523764)
chr5 (119-167)||(28664905-28664954)
chr5 (39-104)||(29263409-29263474)
chr5 (51-120)||(32417186-32417255)
chr5 (96-172)||(17474529-17474605)
chr5 (109-177)||(18208147-18208214)
chr5 (11-79)||(19085989-19086057)
chr5 (112-176)||(34487773-34487836)
chr5 (42-121)||(15544239-15544318)
chr5 (88-167)||(24167461-24167539)
chr5 (88-158)||(34128788-34128859)
chr5 (137-167)||(22755666-22755696)
chr5 (88-175)||(15375770-15375859)
chr5 (119-172)||(15690916-15690969)
chr5 (90-167)||(26121008-26121084)
chr5 (88-164)||(26835796-26835872)
chr5 (90-172)||(20563969-20564053)
chr5 (193-229)||(22036169-22036205)
chr5 (193-229)||(22039395-22039431)
chr5 (96-167)||(24140579-24140651)
[»] chr3 (33 HSPs)
chr3 (69-176)||(21303211-21303318)
chr3 (69-176)||(21325476-21325581)
chr3 (87-176)||(12805765-12805854)
chr3 (83-167)||(20023423-20023508)
chr3 (88-176)||(8445956-8446044)
chr3 (116-172)||(10745040-10745096)
chr3 (78-172)||(17438296-17438391)
chr3 (60-158)||(8143767-8143864)
chr3 (88-172)||(4650364-4650449)
chr3 (88-172)||(8770146-8770231)
chr3 (88-173)||(17155930-17156014)
chr3 (88-176)||(21825745-21825833)
chr3 (88-172)||(41508506-41508590)
chr3 (88-166)||(8267076-8267154)
chr3 (88-172)||(8765244-8765329)
chr3 (88-172)||(16245605-16245690)
chr3 (180-237)||(23049269-23049326)
chr3 (88-172)||(2167493-2167577)
chr3 (95-167)||(18736555-18736627)
chr3 (44-120)||(23055995-23056071)
chr3 (119-172)||(3116326-3116380)
chr3 (91-167)||(932886-932963)
chr3 (88-167)||(12754798-12754879)
chr3 (180-237)||(17544573-17544630)
chr3 (131-167)||(2723753-2723789)
chr3 (90-172)||(16229831-16229915)
chr3 (96-165)||(19925505-19925576)
chr3 (130-167)||(5508478-5508515)
chr3 (88-160)||(6290051-6290123)
chr3 (88-167)||(8170014-8170095)
chr3 (88-167)||(21302062-21302143)
chr3 (193-229)||(10557810-10557846)
chr3 (193-237)||(19194051-19194095)
[»] scaffold0024 (1 HSPs)
scaffold0024 (88-176)||(39720-39808)
[»] chr2 (30 HSPs)
chr2 (54-172)||(45553268-45553384)
chr2 (88-176)||(32085598-32085686)
chr2 (70-172)||(17890076-17890178)
chr2 (88-173)||(23933421-23933506)
chr2 (88-172)||(27908994-27909079)
chr2 (52-167)||(45621722-45621837)
chr2 (69-172)||(17349486-17349592)
chr2 (119-172)||(17675535-17675589)
chr2 (88-172)||(25530574-25530659)
chr2 (88-172)||(25618694-25618779)
chr2 (88-172)||(26603235-26603320)
chr2 (88-172)||(28925660-28925745)
chr2 (119-176)||(29027631-29027688)
chr2 (73-172)||(29719092-29719193)
chr2 (121-172)||(17635683-17635735)
chr2 (130-172)||(25887822-25887864)
chr2 (88-172)||(30411805-30411891)
chr2 (39-104)||(9239348-9239412)
chr2 (131-176)||(20174554-20174599)
chr2 (88-172)||(29143088-29143173)
chr2 (193-237)||(33749730-33749774)
chr2 (193-236)||(6276923-6276966)
chr2 (130-165)||(11382671-11382706)
chr2 (193-231)||(16881604-16881642)
chr2 (193-231)||(17039294-17039332)
chr2 (43-140)||(19287500-19287597)
chr2 (78-172)||(15339376-15339472)
chr2 (96-167)||(25196154-25196226)
chr2 (193-229)||(35077227-35077263)
chr2 (193-229)||(35080485-35080521)
[»] chr8 (23 HSPs)
chr8 (88-167)||(9642022-9642101)
chr8 (39-158)||(5851091-5851214)
chr8 (88-177)||(7983715-7983804)
chr8 (106-176)||(14528284-14528354)
chr8 (52-161)||(15238948-15239056)
chr8 (130-176)||(25182346-25182392)
chr8 (131-176)||(13697990-13698035)
chr8 (88-172)||(23893089-23893174)
chr8 (130-166)||(18448460-18448496)
chr8 (70-173)||(30122012-30122115)
chr8 (130-176)||(19786866-19786912)
chr8 (88-172)||(24114159-24114244)
chr8 (88-164)||(24269743-24269820)
chr8 (96-176)||(44010907-44010988)
chr8 (193-237)||(5952437-5952481)
chr8 (194-237)||(2847580-2847623)
chr8 (90-172)||(18569193-18569276)
chr8 (130-167)||(17101823-17101861)
chr8 (88-165)||(24110545-24110623)
chr8 (88-157)||(26394574-26394644)
chr8 (54-120)||(31288530-31288596)
chr8 (116-172)||(6885096-6885153)
chr8 (88-172)||(16404039-16404124)
[»] scaffold0671 (1 HSPs)
scaffold0671 (88-172)||(569-654)
[»] scaffold0102 (1 HSPs)
scaffold0102 (69-172)||(35677-35780)
[»] scaffold0062 (1 HSPs)
scaffold0062 (130-176)||(43145-43191)
[»] scaffold0056 (2 HSPs)
scaffold0056 (84-172)||(21403-21492)
scaffold0056 (96-172)||(25113-25190)
[»] scaffold0136 (1 HSPs)
scaffold0136 (39-161)||(15293-15416)
[»] scaffold0005 (1 HSPs)
scaffold0005 (130-176)||(168217-168263)
[»] scaffold0638 (1 HSPs)
scaffold0638 (96-175)||(705-786)
[»] scaffold0263 (1 HSPs)
scaffold0263 (88-172)||(15785-15870)
[»] scaffold0043 (1 HSPs)
scaffold0043 (90-167)||(89731-89808)
[»] scaffold0012 (1 HSPs)
scaffold0012 (193-238)||(157408-157453)
[»] scaffold2047 (1 HSPs)
scaffold2047 (193-237)||(535-579)
[»] scaffold0386 (1 HSPs)
scaffold0386 (88-172)||(5980-6066)
[»] scaffold0351 (1 HSPs)
scaffold0351 (130-176)||(5682-5728)
[»] scaffold0054 (1 HSPs)
scaffold0054 (88-172)||(72148-72234)
[»] scaffold0002 (1 HSPs)
scaffold0002 (130-176)||(114623-114669)
[»] scaffold0838 (1 HSPs)
scaffold0838 (131-164)||(2515-2548)
[»] scaffold0832 (1 HSPs)
scaffold0832 (131-164)||(2546-2579)
[»] scaffold0086 (1 HSPs)
scaffold0086 (180-237)||(24238-24295)
[»] scaffold0884 (1 HSPs)
scaffold0884 (193-229)||(4297-4333)
[»] scaffold0622 (1 HSPs)
scaffold0622 (88-176)||(864-951)
[»] scaffold0001 (1 HSPs)
scaffold0001 (91-173)||(69217-69301)


Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 1 - 400
Target Start/End: Complemental strand, 140426 - 140027
Alignment:
Q  1 tcccacaaattcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  140426 tcccacaaattcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaa 140327  T
Q  101 tcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctccgaggatacgaatttatttattac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  140326 tcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctccgaggatacgaatttatttattac 140227  T
Q  201 tttgatataagttagaacacttgctaattttgtatcacatacccccttagaaaacctgaggtggccaagatgacggtggagctgattgagctaaccagaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  140226 tttgatataagttagaacacttgctaattttgtatcacatacccccttagaaaacctgaggtggccaagatgacggtggagctgattgagctaaccagaa 140127  T
Q  301 ggaggctaactaagaaagagataagactaaagggaattatgcccagttttatttcctagactctagagtgtgagttcatttgacatttgcatgaagcagt 400  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  140126 agaggctaactaagaaagagataagactaaagggaattatgcccagttttatttcctagactctagagtgtgagttcatttgacatttgcatgaagcagt 140027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 10584269 - 10584450
Alignment:
Q  1 tcccacaaattcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaa 100  Q
    |||||| || |||||||||||| | ||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||| | |||| || ||||||| ||    
T  10584269 tcccacgaactcatcacttaaataacccttacgtgaatcaacttgaataagacttgactgttacgtaaatctaacaaatgaatagagggaattcaaaaaa 10584368  T
Q  101 tcctgaccgctactaacatttctgcaactaaaacaggt------aacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    || | |||| | |||||||||||||||| |||||||||      || ||| | |||||||||||||||||||| ||||||||    
T  10584369 tcataaccgttgctaacatttctgcaaccaaaacaggtaatttaaatttgttttgttgcaaacagataaaaattgcaatctc 10584450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 176
Target Start/End: Complemental strand, 10648871 - 10648713
Alignment:
Q  16 acttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctacta 115  Q
    ||||||| | |||||||||||||||||  |||||| |||||| ||||||||||||||||||||| | || | |  ||| |||||||||  || | | | |    
T  10648871 acttaaatatcccttacgtgaattaactcgaataagacttgattgttacgtaaatccaacaaatgaataaaggaaatttaaagaatcc--actgttgcca 10648774  T
Q  116 acatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    | ||||||||||| |||||| |||||||||| |||||||||||||||||||| ||||||||    
T  10648773 atatttctgcaaccaaaacatgtaacttgctttgttgcaaacagataaaaattgcaatctc 10648713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 8293920 - 8293996
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    |||||||||||||| ||| || | |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8293920 attcaaagaatcctaaccactgcgaacatttctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaaat 8293996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 18495672 - 18495521
Alignment:
Q  5 acaaattcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcct 104  Q
    ||||| |||||||||||| | |||||||||||||||||  |||||| ||||| || ||||||||||||||||||||| |||| |||||| ||||||||||    
T  18495672 acaaactcatcacttaaataacccttacgtgaattaactcgaataagacttgtctcttacgtaaatccaacaaataaatagaggggatttaaagaatcct 18495573  T
Q  105 gaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaa 156  Q
     || ||  |||||| ||||||||  |||| | || |||||||| |||||||||    
T  18495572 aacagccgctaaca-ttctgcaatcaaaatatgtaaacttgctttgttgcaaa 18495521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 45 - 167
Target Start/End: Complemental strand, 1873051 - 1872930
Alignment:
Q  45 gaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttg 144  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||| | ||    |||||||| || ||  |||||||||||||||    
T  1873051 gaataagacttgactgttacgtaaatccaacaaataaatagaggggattcaaagaatcctaatcgactttaacattt-tgtaatcaaaacaggtaacttg 1872953  T
Q  145 ctctgttgcaaacagataaaaat 167  Q
     | ||||||||||| ||||||||    
T  1872952 ttgtgttgcaaacatataaaaat 1872930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 18662663 - 18662578
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    ||||||| |||| |||| |||||| || ||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||    
T  18662663 gggattcgaagagtcctaaccgctgcttacatttctgcaaccaaaacaggtaacttgctctgttgcaaacaaataaaaattgcaat 18662578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 39 - 161
Target Start/End: Complemental strand, 5797782 - 5797659
Alignment:
Q  39 taacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt 138  Q
    |||||||||||| |||||||||||| |||| || ||||| ||  |||| ||||||||||||||||| |||||| |||||| ||||||||  |||||||||    
T  5797782 taacatgaataagacttgactgttaagtaattcgaacaactacatagaggggattcaaagaatcctaaccgctgctaaca-ttctgcaatcaaaacaggt 5797684  T
Q  139 aa--cttgctctgttgcaaacagat 161  Q
    ||   ||||||||||||||| ||||    
T  5797683 aaactttgctctgttgcaaatagat 5797659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 90 - 175
Target Start/End: Complemental strand, 3734817 - 3734732
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatct 175  Q
    |||||||||| |||| |||  | || || |||||||||| |||||||||||||||||||||||||||||||||||| | |||||||    
T  3734817 gattcaaagagtcctaaccattgcttacttttctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaatttgcaatct 3734732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 13418744 - 13418660
Alignment:
Q  89 ggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||||||||| |||||| || || || ||||||  ||||||||||| ||||||||||||||||||||||||||| ||||    
T  13418744 ggattcaaagaatcctaaccgctgcttactttgctgcaatcaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 13418660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 14195876 - 14195936
Alignment:
Q  116 acatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  14195876 acatttctgcaatcaaaacagataacttgctctgttgcaaacagataaaaattgcaatctc 14195936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 4786084 - 4785985
Alignment:
Q  69 atccaacaa-ataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaa 166  Q
    ||||||||| |||| ||| |||||||| ||||||||| |||||| || || |||||||||| |||| ||||||||||||||| ||||||| |||||||||    
T  4786084 atccaacaatataaataggagggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctattgcaaatagataaaaa 4785985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 7397383 - 7397276
Alignment:
Q  70 tccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatg 168  Q
    |||||||||| | |||| || |||| ||||||||| |||||| || || |||||||||| |||| ||| ||||||| | ||||||||||||||||||||     
T  7397383 tccaacaaatgaatagagggaattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacagataacttgttttgttgcaaacagataaaaatt 7397284  T
Q  169 gcaatctc 176  Q
    ||||||||    
T  7397283 gcaatctc 7397276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 8877650 - 8877559
Alignment:
Q  83 tagaagggattcaaagaatcctgaccgctactaac-atttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||| ||||||||||||||||| |||||| || || |||| |||||| |||| |||||| ||||||||||||||||||||||||||| ||||    
T  8877650 tagaggggattcaaagaatcctaaccgctgcttactatttttgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 8877559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 2564042 - 2563961
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaa-ctaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||| ||| ||||| ||||||||| || ||||||||| ||||| ||||||| |||||||||||||||||||||||||||    
T  2564042 gggattcgaaggatcctaaccgctacttacttttctgcaaactaaagcaggtaaacttgctctgttgcaaacagataaaaat 2563961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 8313299 - 8313356
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||| |||| |||||||||||||||||| |||||||||||||| ||||||||    
T  8313299 tttctgcaaccaaaataggtaacttgctctgttgaaaacagataaaaattgcaatctc 8313356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 17153029 - 17153118
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||| || | |||||| || || |||||||||| |||| ||||||||||||| ||||||||||||||||||||  |||||||    
T  17153029 gggattcaaagagtcataaccgctgcttacttttctgcaaccaaaaacaggtaacttgctttgttgcaaacagataaaaataacaatctc 17153118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 20582479 - 20582394
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| || ||| || || |||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||    
T  20582479 gggattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagataaaaattgcaa 20582394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 1848105 - 1848188
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||| ||||||| | |||||| || || |||||||||| ||||||||||| ||||||||||| ||||||||||||||| ||||    
T  1848105 gattcgaagaatcataaccgctgcttacttttctgcaaccaaaacaggtaaacttgctctgtttcaaacagataaaaattgcaa 1848188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 6006143 - 6006084
Alignment:
Q  106 accgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaa 165  Q
    ||||||||| || ||||||| || |||||||||||||| |||||||||||||||||||||    
T  6006143 accgctacttacttttctgccaccaaaacaggtaacttactctgttgcaaacagataaaa 6006084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 5108789 - 5108708
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggt-aacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||||| |||||| || || |||||||||| |||| || || |||||||||| ||||||||||||||||||    
T  5108789 gggattcaaagaatcctaaccgctgcttacttttctgcaaccaaaatcaagtaaacttgctctcttgcaaacagataaaaat 5108708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 176
Target Start/End: Complemental strand, 4579312 - 4579232
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| || |||||||| || |||| |||||| |||| |||||||||||| |||| ||||||||||||||| | ||||||    
T  4579312 aagaattcttaccgctacaaatatttatgcaaccaaaataggtaacttgctatgttacaaacagataaaaattgtaatctc 4579232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 18368854 - 18368934
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||| ||||||| |||| | || || ||||| |||| |||| ||||||||||||| ||||||||||||||||||||    
T  18368854 gggattcaaggaatcctaaccgtttcttacttttctacaaccaaaagcaggtaacttgctttgttgcaaacagataaaaat 18368934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 7318447 - 7318408
Alignment:
Q  137 gtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  7318447 gtaacttgctctgttgcaaacagataaaaattgcaatctc 7318408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 21501487 - 21501413
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataa 163  Q
    |||||||||| ||| || || ||| |||||||| ||||||| ||||||||||||||| | ||||||||||||||||    
T  21501487 gggattcaaataattctaactgctgctaacatt-ctgcaaccaaaacaggtaacttgttttgttgcaaacagataa 21501413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 31493141 - 31493070
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||| |||| | || |||||||| |||| |||||| ||||||  |||||||||||||||||||||||    
T  31493141 aagaatcctaaccgttgcttacatttctacaaccaaaacaagtaactgactctgttgcaaacagataaaaat 31493070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 7492181 - 7492223
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||||||||||||||||||||||| ||||||| ||||    
T  7492181 aaaacaggtaacttgctctgttgcaaacagttaaaaattgcaa 7492223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 8053938 - 8054016
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaa 165  Q
    ||||||||||||||||| || ||| || || |||||||||| ||||||||| |||||||| | ||||||| ||||||||    
T  8053938 gggattcaaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctatattgcaaatagataaaa 8054016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 1587858 - 1587817
Alignment:
Q  135 aggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||||||||||||||| |||||||| ||||||||    
T  1587858 aggtaacttgctctgttgcaaacaaataaaaattgcaatctc 1587817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 13277715 - 13277630
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||||| | ||||||| || ||||| |||| ||||||||| || | ||||| | |||||||||||||||| ||||    
T  13277715 gggattcaaagaatcctaatcgctacttacttttctacaaccaaaacaggtcaattcgctctatagcaaacagataaaaattgcaa 13277630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 21884988 - 21885045
Alignment:
Q  44 tgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaat 101  Q
    ||||||| ||||||||||||||||| |||||||||||  || | ||||||||||||||    
T  21884988 tgaataagacttgactgttacgtaattccaacaaatatatataggggattcaaagaat 21885045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 27796968 - 27797025
Alignment:
Q  180 ggatacgaatttatttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||| |||||||||||||||||   |||||||||| | |||||||||||||||||||    
T  27796968 ggatatgaatttatttattacttcagtataagttagtatacttgctaattttgtatca 27797025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 5189499 - 5189455
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||    
T  5189499 tttattacttcgatataagttagtacacttgctaattatgtatca 5189455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 175
Target Start/End: Original strand, 10586943 - 10586987
Alignment:
Q  131 aaacaggtaacttgctctgttgcaaacagataaaaatggcaatct 175  Q
    ||||| ||| ||||||||||||||||||||||||||| |||||||    
T  10586943 aaacatgtatcttgctctgttgcaaacagataaaaattgcaatct 10586987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 17829761 - 17829713
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||| |||| ||||||| ||||||| ||||||||||||||||||||||    
T  17829761 tttctccaaccaaaacagttaacttgttctgttgcaaacagataaaaat 17829713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 7570641 - 7570696
Alignment:
Q  182 atacgaatttatttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||||||| | ||||||||| ||||||| |||| ||||||||||||||| |||||    
T  7570641 atacgaattaaattattacttcgatataaattagtacacttgctaattttctatca 7570696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 7577056 - 7577111
Alignment:
Q  182 atacgaatttatttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||||||| | ||||||||| ||||||| |||| ||||||||||||||| |||||    
T  7577056 atacgaattaaattattacttcgatataaattagtacacttgctaattttctatca 7577111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 9574630 - 9574551
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||||| || |||  | || ||||| |||  ||| ||||| ||||||||| ||||||||||||||||||    
T  9574630 gggattcaaagaatcctaactgctgtttacttttcttcaaacaaaccaggttacttgctctattgcaaacagataaaaat 9574551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 11221051 - 11221126
Alignment:
Q  98 gaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    ||||||| ||| || |||||||||||  ||  |||||| ||||||| |||||||||||||| |||||||| |||||    
T  11221051 gaatcctaaccactgctaacatttctaaaatcaaaacaagtaactttctctgttgcaaacaaataaaaattgcaat 11221126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 18973732 - 18973681
Alignment:
Q  180 ggatacgaatttatttattactttgatataagttagaacacttgctaatttt 231  Q
    ||||||||||| | ||||||||| ||||||| |||| |||||||||||||||    
T  18973732 ggatacgaattaaattattacttcgatataaattagtacacttgctaatttt 18973681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 19153476 - 19153434
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||| | |||||||||||||||||||| ||||    
T  19153476 aaaacaggtaacttgttatgttgcaaacagataaaaattgcaa 19153434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 161
Target Start/End: Complemental strand, 20174821 - 20174729
Alignment:
Q  70 tccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa--cttgctctgttgcaaacagat 161  Q
    |||||||||||| |||||||||||| ||||||||| ||  | ||||||| |||| |||  |||||||||||  |||| ||||||||| ||||||    
T  20174821 tccaacaaataaatagaagggattcgaagaatcctaacgaccactaaca-ttctacaatcaaaacaggtaaatcttggtctgttgcatacagat 20174729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 172
Target Start/End: Complemental strand, 20752875 - 20752833
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||| | |||||||||||||||||||| ||||    
T  20752875 aaaacaggtaacttgttatgttgcaaacagataaaaattgcaa 20752833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 101
Target Start/End: Original strand, 26134563 - 26134613
Alignment:
Q  51 aacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaat 101  Q
    |||||||||||||| ||| |||||||||||| || | ||||||||||||||    
T  26134563 aacttgactgttacataattccaacaaataaataaaggggattcaaagaat 26134613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 6042674 - 6042589
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaa-ctaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||||| |||||| || |  ||||||||| | |||| ||||||  | |||||||||||||| |||||||| ||||    
T  6042674 gggattcaaagaatcctaaccgctgcttatttttctgcaaccaaaaaaaggtaaacttctctgttgcaaacatataaaaattgcaa 6042589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 9131134 - 9131049
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||||  || || ||| |||||| |||| ||| ||||||||||| ||||||||| |||||||| ||||    
T  9131134 gggattcgaagaatcctaaccgcagcttacttttttgcaaccaaaaacagttaacttgctctattgcaaacaaataaaaattgcaa 9131049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 44672831 - 44672786
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatcac 238  Q
    |||||||||| |||||||||||| ||||||||||||| | ||||||    
T  44672831 tttattacttcgatataagttagtacacttgctaattatctatcac 44672786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 1636736 - 1636700
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  1636736 tttattacttcgatataagttagtacacttgctaatt 1636700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 3329542 - 3329618
Alignment:
Q  98 gaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| |||||| || || |||||||||| |||| || |||| |||||| |||||||||||||||||||| ||||    
T  3329542 gaatcctaaccgctgcttacttttctgcaaccaaaaacaagtaaacttgctatgttgcaaacagataaaaattgcaa 3329618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 4449191 - 4449111
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaaat 167  Q
    |||||||||||||| || ||||||  | || ||| |||||| |||| |||||| || |||||| |||||||||||||||||    
T  4449191 gggattcaaagaattctaaccgctgtttacttttttgcaaccaaaataggtaaattcgctctgctgcaaacagataaaaat 4449111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 102
Target Start/End: Original strand, 10339524 - 10339580
Alignment:
Q  46 aataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatc 102  Q
    ||||| |||||||||||| |||| || ||||||||| || ||| |||||||||||||    
T  10339524 aataagacttgactgttaagtaattctaacaaataaataaaagagattcaaagaatc 10339580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 11803292 - 11803212
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||| || |||||| ||||||  | || | |||||||| ||||||||||| ||||||||||||||||||  |||||||    
T  11803292 gggattcgaataatcctaaccgctggttacttctctgcaaccaaaacaggtaaacttgctctgttgcaaacaactaaaaat 11803212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 14754974 - 14755042
Alignment:
Q  52 acttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatt 120  Q
    ||||||||||||  ||| |||||| ||||| |||| ||||||||||||||| | ||||| | |||||||    
T  14754974 acttgactgttaattaattccaactaataaatagatgggattcaaagaatcttaaccgccattaacatt 14755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 16297727 - 16297795
Alignment:
Q  106 accgctactaacatttctgcaactaaaac-aggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    |||||| || || |||||||||| ||||  ||||||||| |||||||||||||| |||||||| |||||    
T  16297727 accgctgcttacttttctgcaaccaaaaataggtaacttactctgttgcaaacatataaaaattgcaat 16297795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 12761554 - 12761390
Alignment:
Q  1 tcccacaaattcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaa 100  Q
    |||||| || |||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||||||| ||||| | |||| |||||||||||||    
T  12761554 tcccacgaactcatcacttaaatagcccttacgtgaattaactcgaataagacttgactgttacgtaaatccatcaaatgaatagaggggattcaaagaa 12761455  T
Q  101 tcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaa 165  Q
    || | |||||| ||||||||  |||||| ||||||||||||||||| ||||||||||| ||||||    
T  12761454 tcataaccgctgctaacattgttgcaaccaaaacaggtaacttgctttgttgcaaacaaataaaa 12761390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 143
Target Start/End: Complemental strand, 20315298 - 20315168
Alignment:
Q  11 tcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgc 110  Q
    |||||||||||| | ||||| ||| | |||||  |||||| |||||||| ||||||| || |||||||||| |||| ||||||||||||||||| |||||    
T  20315298 tcatcacttaaatatccctttcgt-atttaactcgaataagacttgactattacgtagattcaacaaataaatagaggggattcaaagaatcctaaccgc 20315200  T
Q  111 tactaacatttctgcaactaaaacaggtaactt 143  Q
     ||||||| ||||||||  ||||||||||||||    
T  20315199 cactaaca-ttctgcaatcaaaacaggtaactt 20315168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 26115789 - 26115865
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||| |||||| ||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  26115789 aagaatcctaaccgctgctaacatttatgcaaccaaaacaggtaacttactctgttgcaaacagataaaaattgcaa 26115865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 25121102 - 25121189
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatct 175  Q
    ||||||| ||||||||| |||||| || || |||||||||  ||||| ||||||||||||||||||||||||||| |||| |||||||    
T  25121102 gggattcgaagaatcctaaccgctgcttacttttctgcaatcaaaacgggtaacttgctctgttgcaaacagatagaaattgcaatct 25121189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 17672219 - 17672137
Alignment:
Q  94 caaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||| |||||| || ||| || || |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17672219 caaataatcctaactgcttcttacttttctgcaaccaaaccaggtaacttgctctgttgcaaacagataaaaattgcaatctc 17672137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 17951203 - 17951260
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17951203 tttctgcaaccaaatcaggtaacttgctctgttgcaaacagataaaaattgcaatctc 17951260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 17955055 - 17955112
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  17955055 tttctgcaaccaaatcaggtaacttgctctgttgcaaacagataaaaattgcaatctc 17955112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 12578176 - 12578230
Alignment:
Q  122 ctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||    
T  12578176 ctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaaattgtaatctc 12578230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 13909078 - 13908992
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||||| |||||| || || ||| |||||| |||| ||||||| ||||||||||||||||||||||||||| ||||    
T  13909078 gggattcaaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 13908992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 165
Target Start/End: Complemental strand, 3775104 - 3774975
Alignment:
Q  27 ccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgca 126  Q
    ||||| ||||||||||  |||||| ||||||||||||| |||||||||||||| | |||  |||       ||||||| | || |  |||||||||||||    
T  3775104 ccttatgtgaattaactcgaataagacttgactgttacataaatccaacaaatgaatag--ggg-------gaatcctaatcgttgttaacatttctgca 3775014  T
Q  127 actaaaacaggtaacttgctctgttgcaaacagataaaa 165  Q
    || |||| |||||||||||||||||||||| ||||||||    
T  3775013 accaaaaaaggtaacttgctctgttgcaaatagataaaa 3774975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 17709977 - 17709897
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||| ||||||||| || |||||| || ||| |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  17709977 gggattcgaagaatcctaacagctacttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaat 17709897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 19092518 - 19092430
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||| |||||| |||| ||||||| | || |||||| ||| ||||||||||| || |||||||| |||||||||||||| ||||||||    
T  19092518 gggatgcaaagagtcctaaccgctatttacttttctgtaaccaaaacaggtaatttactctgttgtaaacagataaaaattgcaatctc 19092430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 21323784 - 21323840
Alignment:
Q  120 ttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| | ||||||    
T  21323784 ttctgcaaccaaaacaggtaacttgctctgttgcaaatagataaaaattgtaatctc 21323840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 19374694 - 19374776
Alignment:
Q  94 caaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||| |||  | || ||||||||||||| ||||||||||||||||| || |||||||| |||||| | ||||||||    
T  19374694 caaagaatcctaaccaatgcttacatttctgcaaccaaaacaggtaacttgctttgctgcaaacatataaaatttgcaatctc 19374776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 24639335 - 24639415
Alignment:
Q  87 agggattcaaagaatcctgaccgctactaacatttctgcaact-aaaacaggtaa-cttgctctgttgcaaacagataaaa 165  Q
    |||||||||||||||||| ||| || || || ||||||||||  ||||||||||| |||||||||||||||||| ||||||    
T  24639335 agggattcaaagaatcctaaccactgcttacttttctgcaaccgaaaacaggtaaacttgctctgttgcaaacaaataaaa 24639415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 14649075 - 14649029
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||    
T  14649075 aaaacaagtaacttgctctgttgcaaacagataaaaattgaaatctc 14649029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 15164958 - 15164904
Alignment:
Q  119 tttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  15164958 tttctgcaaccaaaacaggtaaacttgctctgttgcaaacaaataaaaattgcaa 15164904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 120
Target Start/End: Complemental strand, 22526641 - 22526555
Alignment:
Q  34 tgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatt 120  Q
    ||||||| ||| ||||| |||||| |||||||||| |||||||| ||| ||||  |||||||||||||| | |||||  ||||||||    
T  22526641 tgaattatcataaataagacttgattgttacgtaattccaacaattaaatagagaggattcaaagaatcataaccgccgctaacatt 22526555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 11521073 - 11521153
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||||||| ||| |  |||||||| ||||||  |||||||| |||||||| |||||||||||| ||||||| ||||    
T  11521073 attcaaagaatcctaaccaccgctaacatt-ctgcaatcaaaacaggcaacttgctttgttgcaaacaggtaaaaattgcaa 11521153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 9052933 - 9052865
Alignment:
Q  52 acttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatt 120  Q
    ||||||||||||  ||| |||||| ||||| |||| ||||||||||||||||| ||||| | |||||||    
T  9052933 acttgactgttatttaattccaacgaataaatagaggggattcaaagaatcctaaccgccattaacatt 9052865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 16730318 - 16730361
Alignment:
Q  130 aaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||    
T  16730318 aaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 16730361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 19562050 - 19562137
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaaatggcaat 173  Q
    ||||||| |||||| || ||||||  | || |||||||||| |||| ||||||| |||||||||||||||| |||||||||| |||||    
T  19562050 gggattcgaagaattctaaccgctgattacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaagagataaaaattgcaat 19562137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 5679381 - 5679343
Alignment:
Q  135 aggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    ||||||||||||||||| ||||||||||||||| |||||    
T  5679381 aggtaacttgctctgttacaaacagataaaaattgcaat 5679343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 17217012 - 17216958
Alignment:
Q  119 tttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||| |||| |||||| |||| ||||||||||||||||||||||||||| ||||    
T  17217012 tttctacaaccaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa 17216958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 19929593 - 19929630
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  19929593 aaaacatgtaatttgctctgttgcaaacagataaaaat 19929630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 234
Target Start/End: Original strand, 54900088 - 54900129
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgta 234  Q
    |||||||||| |||||||||||| |||||||||||| |||||    
T  54900088 tttattacttcgatataagttagtacacttgctaatgttgta 54900129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 12706001 - 12706033
Alignment:
Q  207 ataagttagaacacttgctaattttgtatcaca 239  Q
    ||||||||| |||||||||||||||||||||||    
T  12706001 ataagttagtacacttgctaattttgtatcaca 12706033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 166
Target Start/End: Original strand, 17026219 - 17026299
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttg-ctctgttgcaaacagataaaaa 166  Q
    ||||||| ||||||||| |||||| || || | |||||||| |||| ||||||| ||  ||||||||||||||||||||||    
T  17026219 gggattcgaagaatcctaaccgctgcttacttgtctgcaaccaaaaacaggtaaatttactctgttgcaaacagataaaaa 17026299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 19900845 - 19900727
Alignment:
Q  44 tgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa--c 141  Q
    ||||||| ||||||| |||| |||| |||||||||||| || | ||||| | ||||||||| ||| |  |||||| || |||||  |||||||||||       
T  19900845 tgaataagacttgacagttaagtaattccaacaaataaatataggggatccgaagaatcctaacctccgctaaca-ttatgcaatcaaaacaggtaaact 19900747  T
Q  142 ttgctctgttgcaaacagat 161  Q
    ||||| ||||||||||||||    
T  19900746 ttgctatgttgcaaacagat 19900727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 20829642 - 20829694
Alignment:
Q  116 acatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||| |||| || |||||||||| ||| ||||||||||||||||    
T  20829642 acatttctgcaaccaaaaacaagtaacttgctatgtcgcaaacagataaaaat 20829694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 6e-44; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 11 - 173
Target Start/End: Original strand, 32382807 - 32382969
Alignment:
Q  11 tcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgc 110  Q
    |||||||||||| ||| ||||||||||||||   |||||| ||||||||||||||||||| |||||||| | |  | ||||||||||||||||| || ||    
T  32382807 tcatcacttaaatagctcttacgtgaattaaatcgaataagacttgactgttacgtaaattcaacaaatgaatgaaggggattcaaagaatcctaacggc 32382906  T
Q  111 tactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    | |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||    
T  32382907 tgctaacatttctgcaaccaaaacaggtaatttgctctgttgcaaacagataaaaattgcaat 32382969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 22620573 - 22620397
Alignment:
Q  1 tcccacaaattcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaa 100  Q
    ||||| ||| |||||||||||| |||||||| |||||||||| ||||||| |||| ||||||| |||||| | | |||| | |||| |||||| ||||||    
T  22620573 tcccaaaaactcatcacttaaatagcccttatgtgaattaacttgaataagacttaactgttatgtaaattcgataaatgaatagaggggatttaaagaa 22620474  T
Q  101 tcctgaccgctactaaca-tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    || | |||||| || ||| ||||| |||| ||||||||||||| | | ||||||||||||||||||| |||||||||    
T  22620473 tcttaaccgctgcttacattttctacaaccaaaacaggtaactcgatttgttgcaaacagataaaaaaggcaatctc 22620397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 91 - 172
Target Start/End: Complemental strand, 34481189 - 34481108
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||| |||| |||||| |||||||| ||||    
T  34481189 attcaaagaatactgaccgctactaacatttttacaacaaaaacaggtaacttgctttgttccaaacatataaaaattgcaa 34481108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 89 - 173
Target Start/End: Complemental strand, 22664429 - 22664345
Alignment:
Q  89 ggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    ||||||||||| |||| ||||||||| || |||||||||| |||||| ||||||||||||||| |||||| |||||||| |||||    
T  22664429 ggattcaaagagtcctaaccgctacttacttttctgcaaccaaaacatgtaacttgctctgttacaaacaaataaaaattgcaat 22664345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 72 - 176
Target Start/End: Complemental strand, 28008344 - 28008240
Alignment:
Q  72 caacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggca 171  Q
    |||||||||| |||  | ||||||||||||||| |||||| || || |||||||||| |||||| |||| ||||||| ||| |||||||||||||| |||    
T  28008344 caacaaataaataggggagattcaaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaatttgctctattggaaacagataaaaattgca 28008245  T
Q  172 atctc 176  Q
    |||||    
T  28008244 atctc 28008240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 174
Target Start/End: Original strand, 15807877 - 15807982
Alignment:
Q  69 atccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatg 168  Q
    ||||||| ||||| |||  ||||||||||||||||| | |||| || |  ||||| |||| ||||| ||||||||||||||||||||||| ||||||||     
T  15807877 atccaacgaataaatagtggggattcaaagaatcctaatcgctgcttatttttctacaaccaaaactggtaacttgctctgttgcaaacaaataaaaatt 15807976  T
Q  169 gcaatc 174  Q
    ||||||    
T  15807977 gcaatc 15807982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 18100889 - 18100974
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    |||||||||| |||| | |||||| || || |||||||||| |||||| |||||||||| |||||||||||||||||||| |||||    
T  18100889 gggattcaaataatcataaccgctgcttacttttctgcaaccaaaacatgtaacttgctatgttgcaaacagataaaaattgcaat 18100974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 9401739 - 9401644
Alignment:
Q  78 ataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||| |||| ||||||| ||||||||| ||||||||| || ||| || ||| ||||||||| ||||| ||||||||||||||||||||||| ||||    
T  9401739 ataaatagaggggattcgaagaatcctaaccgctacttacttttttgtaaccaaaacaggtaaacttactctgttgcaaacagataaaaattgcaa 9401644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 12208825 - 12208746
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaa 166  Q
    ||||||| ||||||||| |||||| || || |||||||| ||||||||||| ||||||||||||||||||||||| ||||    
T  12208825 gggattcgaagaatcctaaccgctgcttacttttctgcagctaaaacaggtaaacttgctctgttgcaaacagattaaaa 12208746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 29242728 - 29242645
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||| ||||| |||||| || || ||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  29242728 gattcaaagtatcctaaccgcttcttacttttttgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 29242645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 16360063 - 16360006
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||| ||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  16360063 tttctgcaaccaaaacaggtaacttgctttgttgcaaacaaataaaaattgcaatctc 16360006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 33190901 - 33190812
Alignment:
Q  87 agggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| ||||||||||| |||||| || || |||||||||  ||| |||||||||||| |||||||||||| ||||||||  |||||||    
T  33190901 agggatccaaagaatcctaaccgctgcttacttttctgcaatcaaaccaggtaacttgcactgttgcaaacaaataaaaattacaatctc 33190812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 17121378 - 17121464
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||| ||||||||| |||||| || || |||||||||| |||||| |||||||||||| ||||||||| || ||||  ||||||||    
T  17121378 gattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaacttgctctattgcaaacaaatgaaaaatgcaatctc 17121464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 22623119 - 22623029
Alignment:
Q  83 tagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||| ||||||  ||||||||| || ||| || || |||||||||| ||||||||||| |||||||||||||||| | |||||||||||||    
T  22623119 tagaggggatttgaagaatcctaacagctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatatataaaaatggcaa 22623029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 9787754 - 9787843
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||| | || ||||| ||| || |||||||||| |||| ||||| |||||||||||||||||||| | ||||| ||||||||    
T  9787754 gggattcaaagagttctaaccgcaacttacttttctgcaaccaaaaacaggtcacttgctctgttgcaaacagttcaaaattgcaatctc 9787843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 167
Target Start/End: Original strand, 17610135 - 17610212
Alignment:
Q  92 ttcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||| |||||| || || |||||||||| |||| ||||||| |||||||||||||||||| ||||||||    
T  17610135 ttcaaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaacttgctctgttgcaaacatataaaaat 17610212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 12012671 - 12012777
Alignment:
Q  69 atccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatg 168  Q
    ||||||||||||| |||  ||||||| ||||||||| | || |  | || ||| |||||| ||||||||||||| ||| ||||||||||| ||||||||     
T  12012671 atccaacaaataaatagg-gggattcgaagaatcctaatcgttgtttacttttgtgcaaccaaaacaggtaactcgctatgttgcaaacaaataaaaatt 12012769  T
Q  169 gcaatctc 176  Q
    ||||||||    
T  12012770 gcaatctc 12012777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 167
Target Start/End: Original strand, 16069440 - 16069517
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    |||| ||||||||| || ||| || || ||||| |||| ||||||||||| ||||||||||||||| |||||||||||    
T  16069440 attcgaagaatcctaactgctgcttacttttctacaaccaaaacaggtaaacttgctctgttgcaagcagataaaaat 16069517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 16787614 - 16787687
Alignment:
Q  99 aatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||| ||| ||| |||||||||| |||| |||||| |||| ||||| ||||||||||| |||||||| ||||    
T  16787614 aatcctaacctctattaacatttctccaaccaaaacaagtaatttgctatgttgcaaacatataaaaattgcaa 16787687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 21911083 - 21911039
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    |||||| ||| |||||||||||| |||||||||||||||||||||    
T  21911083 tttatttcttcgatataagttagtacacttgctaattttgtatca 21911039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 172
Target Start/End: Original strand, 21987872 - 21987955
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaac-ttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||||||| |||||| || || ||| |||||| |||| |||||||  ||||||||||||||||| |||||||| ||||    
T  21987872 attcaaagaatccttaccgctgcttacttttatgcaaccaaaaacaggtaaagttgctctgttgcaaacatataaaaattgcaa 21987955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 16916821 - 16916907
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaactt-gctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| |||||||||  ||||| || || |||||||||| |||| ||||||| || ||||||||||||| |||||||||| ||||    
T  16916821 gggattcgaagaatcctacccgctgcttacttttctgcaaccaaaaacaggtaaattcgctctgttgcaaagagataaaaattgcaa 16916907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 167
Target Start/End: Complemental strand, 21449302 - 21449220
Alignment:
Q  87 agggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    |||||||| ||||||||| |||||| || || |||||||| | |||| ||| ||| |||||| ||||||||||||||||||||    
T  21449302 agggattcgaagaatcctaaccgctgcttacttttctgcatccaaaaacagttaaacttgctatgttgcaaacagataaaaat 21449220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 231
Target Start/End: Complemental strand, 25662894 - 25662856
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatttt 231  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  25662894 tttattacttcgatataagttagtacacttgctaatttt 25662856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 18825867 - 18825782
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||||| | |||| || || ||||| |||| |||||| || || ||||| ||||| |||||||||||||| ||||    
T  18825867 gggattcaaagaatccttatcgctgcttacttttctacaaccaaaacaagtaaatttgctttgttgtaaacagataaaaattgcaa 18825782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 21973124 - 21973161
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  21973124 aaaacaggtaacttgttatgttgcaaacagataaaaat 21973161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 28957314 - 28957371
Alignment:
Q  180 ggatacgaatttatttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||||||||| | ||||||||| ||||||| |||| |||||||||||  ||||||||    
T  28957314 ggatacgaattaaattattacttcgatataaattagtacacttgctaaaattgtatca 28957371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 51473783 - 51473836
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||| |||| || ||||||| | |||||||||||||||||||| ||||    
T  51473783 tttctgcaaccaaaatagataacttgatatgttgcaaacagataaaaattgcaa 51473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 16179220 - 16179144
Alignment:
Q  98 gaatcctgaccgctactaacatttctgcaactaaaac-aggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| |||||| || || |||||||||| ||||  |||||| ||||||||||||||| ||||||||||| ||||    
T  16179220 gaatcctaaccgctgcttacttttctgcaaccaaaaataggtaaacttgctctgttgcaatcagataaaaattgcaa 16179144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 17017568 - 17017639
Alignment:
Q  66 taaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt 138  Q
    |||||||||||||||| |||| ||||||| ||||| ||| || || ||||||| ||||||||  |||||||||    
T  17017568 taaatccaacaaataaatagaggggattcgaagaacccttactgccactaaca-ttctgcaatcaaaacaggt 17017639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 23037915 - 23037967
Alignment:
Q  116 acatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||| |||| || |||||||||| ||||||||||||| ||||||    
T  23037915 acatttctgcaaccaaaaacaagtaacttgctatgttgcaaacagaaaaaaat 23037967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 24214761 - 24214705
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttg 144  Q
    |||||||||||| |||| ||||||||| |  |||||||||| ||| |||||||||||    
T  24214761 gggattcaaagagtcctaaccgctacttatttttctgcaaccaaaccaggtaacttg 24214705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 28138647 - 28138611
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  28138647 tttattacttcgatataagttagtacacttgctaatt 28138611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 28141897 - 28141861
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  28141897 tttattacttcgatataagttagtacacttgctaatt 28141861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 6e-41; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 11 - 176
Target Start/End: Original strand, 23645566 - 23645731
Alignment:
Q  11 tcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgc 110  Q
    |||||||||||| ||||||||| ||||||||| ||||||| |||||||||||| |||||||||| |||||| ||||  |||||||||||| ||| ||| |    
T  23645566 tcatcacttaaatagcccttacatgaattaacttgaataagacttgactgttatgtaaatccaaaaaataaatagagcggattcaaagaagcctaaccac 23645665  T
Q  111 tactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    | || || ||| |||||| |||||| |||||||||||||||||||||| |||||||| ||||||||    
T  23645666 tgcttacttttatgcaaccaaaacatgtaacttgctctgttgcaaacaaataaaaattgcaatctc 23645731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 25927184 - 25927269
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||||| |||||||||||||||| || ||| ||||||||||||||||||| |||||||||||||||||| ||||||||    
T  25927184 attcaaagaatcctaaccgctactaacatttatgaaaccaaaacaggtaacttgctctattgcaaacagataaaaattgcaatctc 25927269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 175
Target Start/End: Original strand, 22565966 - 22566125
Alignment:
Q  16 acttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctacta 115  Q
    ||||||| ||||||||||||||||||| | ||||| ||||  ||||||||| |||||||||||| | |||| | |||||||| |||||| |||||| ||     
T  22565966 acttaaatagcccttacgtgaattaactttaataagacttagctgttacgt-aatccaacaaatgaatagaggagattcaaaaaatcctaaccgctgctt 22566064  T
Q  116 acatttctgcaa-ctaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatct 175  Q
    || ||||| ||| | |||| ||||||||||   |||||||||||||||||||| |||||||    
T  22566065 acttttctacaatcaaaaataggtaacttgtagtgttgcaaacagataaaaattgcaatct 22566125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 12183206 - 12183294
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||| ||||||||| |||| | || || |||||| ||| ||||||||||||||||| ||||||||||||||||| || ||||||||    
T  12183206 gggattcgaagaatcctaaccgttgcttacttttctgtaaccaaaacaggtaacttgctatgttgcaaacagataaacattgcaatctc 12183294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 89 - 172
Target Start/End: Original strand, 27737565 - 27737649
Alignment:
Q  89 ggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||| ||||||||| |||||| || || ||| |||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  27737565 ggattcgaagaatcctaaccgctgcttacttttttgcaacaaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 27737649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 24252128 - 24252185
Alignment:
Q  110 ctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||| ||||||||||||| |||||| | |||||||||||||||||||||||||||||    
T  24252128 ctacttacatttctgcaaccaaaacacgaaacttgctctgttgcaaacagataaaaat 24252185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 24657339 - 24657424
Alignment:
Q  83 tagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaaat 167  Q
    |||| ||||||| |||||| || |||||| || || |||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  24657339 tagaggggattcgaagaattctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaat 24657424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 19244794 - 19244726
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacag 159  Q
    |||||||||||||| ||| ||||| || ||||| |||| ||| ||||||||||||||||||||||||||    
T  19244794 attcaaagaatccttaccactacttacttttctacaaccaaaccaggtaacttgctctgttgcaaacag 19244726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 24215699 - 24215615
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||||| || ||  ||||||||| |||||| |||| |||||||||| |||||| |||||| |||||||| ||||    
T  24215699 gggattcaaagaatcctaactgccgctaacatttttgcaaccaaaataggtaacttgttctgtttcaaacaaataaaaattgcaa 24215615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 27124370 - 27124450
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||| | |||||| || || |||||||||| || |||||| |||||||||||||||||||| ||||||||    
T  27124370 gggattcaaagaatcttaaccgctgcttacttttctgcaaccaagacaggtaaacttgctctgttgcaaacatataaaaat 27124450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 2586941 - 2586862
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||||| ||||||  |||||||||||||||||| ||| |||||||| | ||||| ||| |||| |||||    
T  2586941 gggattcaaagaatcctaaccgctggtaacatttctgcaactaagacatgtaacttgttgtgttgaaaatagattaaaat 2586862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 21672291 - 21672394
Alignment:
Q  69 atccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatg 168  Q
    |||||| |||||| |||  |||||| ||| | |||| ||||| ||| || ||| |||||| |||||||||||||||||| |||||||| ||||||||||     
T  21672291 atccaaaaaataaataggggggattgaaatattcctaaccgccacttacttttatgcaacgaaaacaggtaacttgctcagttgcaaatagataaaaatt 21672390  T
Q  169 gcaa 172  Q
    ||||    
T  21672391 gcaa 21672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 69 - 172
Target Start/End: Original strand, 21679707 - 21679810
Alignment:
Q  69 atccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatg 168  Q
    |||||| |||||| |||  |||||| ||| | |||| ||||| ||| || ||| |||||| |||||||||||||||||| |||||||| ||||||||||     
T  21679707 atccaaaaaataaataggggggattgaaatattcctaaccgccacttacttttatgcaacgaaaacaggtaacttgctcagttgcaaatagataaaaatt 21679806  T
Q  169 gcaa 172  Q
    ||||    
T  21679807 gcaa 21679810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 8241455 - 8241410
Alignment:
Q  131 aaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||    
T  8241455 aaacaggtaacttgctatgttgcaaacagataaaaattgcaatctc 8241410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 9838548 - 9838491
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||| ||||| ||||||||||||| ||||||||||||||||||  |||||||    
T  9838548 tttctgcaaccaaaacgggtaacttgctcttttgcaaacagataaaaattacaatctc 9838491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 28585858 - 28585939
Alignment:
Q  39 taacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatt 120  Q
    |||||||||||| ||||||| ||||||||| |||||||| ||| |||| ||||||  ||||||||| |||||  ||||||||    
T  28585858 taacatgaataagacttgacggttacgtaattccaacaattaaatagaggggatttgaagaatcctaaccgccgctaacatt 28585939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 28933580 - 28933624
Alignment:
Q  132 aacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||    
T  28933580 aacaagtaacttgctctgttgcaaacagataaaaattgcaatctc 28933624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 22813605 - 22813676
Alignment:
Q  97 agaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaat 167  Q
    |||||| | ||||||||| || |||||||||| ||||||||| |||||||| ||||||||||| ||||||||    
T  22813605 agaatcataaccgctacttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaacaaataaaaat 22813676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 24475277 - 24475202
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaa 164  Q
    ||||| ||||||||| ||| ||||| || |||||||||| ||||||||| |||||| | |||||||||||||||||    
T  24475277 gattcgaagaatcctaaccactacttacttttctgcaaccaaaacaggtaaacttgttttgttgcaaacagataaa 24475202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 9726263 - 9726194
Alignment:
Q  70 tccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa 140  Q
    |||||||||||| |||| || |||||||||||||| ||||| ||||||| ||||||||  |||||||||||    
T  9726263 tccaacaaataaatagagggaattcaaagaatcctaaccgccactaaca-ttctgcaatcaaaacaggtaa 9726194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 87 - 172
Target Start/End: Original strand, 23844339 - 23844425
Alignment:
Q  87 agggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||| || |||||| |||||| || || ||| |||||| ||||||||| |||||| ||| |||||||||||||||||| ||||    
T  23844339 agggattcgaaaaatcctaaccgctgcttacttttatgcaaccaaaacaggtaaacttggtctattgcaaacagataaaaattgcaa 23844425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 25781970 - 25781916
Alignment:
Q  119 tttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||||||| ||||    
T  25781970 tttctgcaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 25781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 1635183 - 1635110
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataa 163  Q
    ||||| ||||||||| ||||||  | || ||||| |||| |||||| |||||||||| ||||||||||||||||    
T  1635183 gattcgaagaatcctaaccgctgtttacttttctacaaccaaaacatgtaacttgctttgttgcaaacagataa 1635110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 15466546 - 15466505
Alignment:
Q  135 aggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||||||||||||||||||||||| | ||||||||    
T  15466546 aggtaacttgctctgttgcaaacagataaaatttgcaatctc 15466505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 965070 - 965114
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||    
T  965070 tttattacttcgatataagttagtacacttgctaattttctatca 965114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 4339950 - 4339882
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaa 164  Q
    ||||| ||||||||||  | || |||||||||| |||||||||||||||||  |||||||||| |||||    
T  4339950 aagaaccctgaccgctggttacttttctgcaaccaaaacaggtaacttgcttagttgcaaacaaataaa 4339882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 9898868 - 9898923
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatct 175  Q
    |||||||||| |||| |||||||||| ||| |||||||||||||||||| |||||||    
T  9898868 tttctgcaaccaaaataggtaacttgttct-ttgcaaacagataaaaattgcaatct 9898923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 17382274 - 17382214
Alignment:
Q  106 accgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaa 165  Q
    |||||| || || |||||||||| |||||| |||| |||||||||||||||||||||||||    
T  17382274 accgctgcttacttttctgcaaccaaaacatgtaaacttgctctgttgcaaacagataaaa 17382214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 17733292 - 17733248
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||    
T  17733292 tttattacttcgatataagttagtacacttgctaattttctatca 17733248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 27316184 - 27316220
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    ||||||||||||||||||||||| |||||||||||||    
T  27316184 tttattactttgatataagttagtacacttgctaatt 27316220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 6630569 - 6630656
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgc-aaacagataaaaatggcaatctc 176  Q
    ||||||||| |||| ||||||| |  ||||| |||||| |||| |||||||||||||||||||| ||| | |||||||| ||||||||    
T  6630569 attcaaagagtcctaaccgctatttccatttttgcaaccaaaaacaggtaacttgctctgttgcaaaaaaaataaaaattgcaatctc 6630656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 91 - 165
Target Start/End: Original strand, 22412940 - 22413015
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaa 165  Q
    |||| ||||||||| ||||||||| || || ||| ||| ||||||||||| || |||||||| |||||||||||||    
T  22412940 attcgaagaatcctaaccgctacttactttcctgtaaccaaaacaggtaaattcgctctgttacaaacagataaaa 22413015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 167
Target Start/End: Complemental strand, 21907607 - 21907578
Alignment:
Q  138 taacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||||||||||||||||||    
T  21907607 taacttgctctgttgcaaacagataaaaat 21907578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 22410256 - 22410289
Alignment:
Q  139 aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||||||||||||||||| ||||    
T  22410256 aacttgctctgttgcaaacagataaaaattgcaa 22410289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 6e-41; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 11 - 172
Target Start/End: Complemental strand, 24260816 - 24260655
Alignment:
Q  11 tcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgc 110  Q
    |||||||||||  | ||||||||| ||||||| ||||||| ||||||  ||| |||||||||||||||| | |||| ||||||||| ||||| | |||||    
T  24260816 tcatcacttaattatcccttacgtaaattaacttgaataagacttgaacgtttcgtaaatccaacaaatgaatagaggggattcaaggaatcataaccgc 24260717  T
Q  111 tactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    | |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||    
T  24260716 tcctaacatttctgcaaccaaaataggtaacttgctctgttgcaaacagataaaaattgcaa 24260655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 11 - 161
Target Start/End: Original strand, 24851971 - 24852121
Alignment:
Q  11 tcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgc 110  Q
    |||||||||||| |||||||| ||||||||||  |||||| ||||||||||||| |||||||||||||| | |||| ||||||||||||||||| ||| |    
T  24851971 tcatcacttaaatagcccttaagtgaattaactcgaataagacttgactgttacataaatccaacaaatgaatagaggggattcaaagaatcctaaccac 24852070  T
Q  111 tactaacatttctgcaactaaaacaggtaac-ttgctctgttgcaaacagat 161  Q
    | ||| || |||| |||| |||||||||||| ||||||||||||||||||||    
T  24852071 tgctatca-ttctacaaccaaaacaggtaactttgctctgttgcaaacagat 24852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 15470236 - 15470083
Alignment:
Q  13 atcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgcta 112  Q
    |||||| ||| |||||||||||||||||||  |||||| | |||||||||| ||||||||||||||||| |||| ||||||||||||||||| |||||      
T  15470236 atcactcaaatagcccttacgtgaattaactcgaataagatttgactgttatgtaaatccaacaaataaatagaggggattcaaagaatcctaaccgccg 15470137  T
Q  113 ctaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    |||| |||| |||||  ||||  |||||||||||||||||||||||||| |||||    
T  15470136 ctaatattt-tgcaatcaaaattggtaacttgctctgttgcaaacagatcaaaat 15470083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 70 - 176
Target Start/End: Complemental strand, 36175374 - 36175268
Alignment:
Q  70 tccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatgg 169  Q
    |||||||||||| ||| || ||||||||||||| | |||||| || || ||||| |||| ||||||||||||||||| ||||| |||||||||||||| |    
T  36175374 tccaacaaataaataggagagattcaaagaatcataaccgcttcttacttttctacaaccaaaacaggtaacttgctttgttgaaaacagataaaaattg 36175275  T
Q  170 caatctc 176  Q
    |||||||    
T  36175274 caatctc 36175268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 24265317 - 24265436
Alignment:
Q  55 tgactgttacgtaaatccaacaaa-taagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgc 153  Q
    |||||||||  ||||||||||||| ||| |||  || ||||||| | |||| |||||| || || ||||||||||||||  |||||||||||| | ||||    
T  24265317 tgactgttatttaaatccaacaaagtaaatagggggaattcaaatagtcctaaccgctgcttacttttctgcaactaaataaggtaacttgctttattgc 24265416  T
Q  154 aaacagataaaaatggcaat 173  Q
    |||||||||||||| |||||    
T  24265417 aaacagataaaaattgcaat 24265436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 24341948 - 24342067
Alignment:
Q  55 tgactgttacgtaaatccaacaaa-taagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgc 153  Q
    |||||||||  ||||||||||||| ||| |||  || ||||||| | |||| |||||| || || ||||||||||||||  |||||||||||| | ||||    
T  24341948 tgactgttatttaaatccaacaaagtaaatagggggaattcaaatagtcctaaccgctgcttacttttctgcaactaaataaggtaacttgctttattgc 24342047  T
Q  154 aaacagataaaaatggcaat 173  Q
    |||||||||||||| |||||    
T  24342048 aaacagataaaaattgcaat 24342067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 20744545 - 20744630
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||||| || || ||||| |||| ||||||||||| |||||| |||||||||||||||||||| ||||    
T  20744545 gggattcgaagaatcctaaccgctgcttacttttctacaaccaaaacaggtaaacttgctatgttgcaaacagataaaaattgcaa 20744630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 70 - 167
Target Start/End: Original strand, 26121181 - 26121279
Alignment:
Q  70 tccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaac-aggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||| || |||  ||||||||||||||||| ||| ||||| || |||||| ||| ||||  || ||||||||||| ||||||||||||||||||    
T  26121181 tccaacaaagaaataggggggattcaaagaatcctaaccactacttacttttctgtaaccaaaaatagataacttgctctcttgcaaacagataaaaat 26121279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 17432103 - 17432026
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    |||| ||||||||| |||||| || || |||||||||| |||||| |||| |||||||||||||||||||| ||||||    
T  17432103 attcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacagaaaaaaat 17432026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 18937943 - 18937882
Alignment:
Q  116 acatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||||| |||| || ||||||||||||||||||||||||||||||| | ||||||    
T  18937943 acatttctgcaaccaaaaacatgtaacttgctctgttgcaaacagataaaaattgaaatctc 18937882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 31375919 - 31375976
Alignment:
Q  180 ggatacgaatttatttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||||||||| | ||||||||| ||||||| |||| |||||||||||||||||||||    
T  31375919 ggatacgaattaaattattacttcgatataaattagtacacttgctaattttgtatca 31375976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 17171458 - 17171518
Alignment:
Q  116 acatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| |||||| ||| ||||||||||||||||||||||  |||||||||| ||||||||    
T  17171458 acatttttgcaaccaaagcaggtaacttgctctgttgcaactagataaaaattgcaatctc 17171518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 17314988 - 17315068
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||| | |||||| || || ||| |||||| |||||||||||||| ||||| ||||||| ||||||||||    
T  17314988 gggattcaaagaatcttaaccgctgcttacttttttgcaaccaaaacaggtaacttcgctctattgcaaaaagataaaaat 17315068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 17635537 - 17635422
Alignment:
Q  51 aacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgt 150  Q
    |||||||||||||  ||| |||||||||| | | |  ||||||||||||||  | |||||  |||||||||||||||| |||||||||||  || | | |    
T  17635537 aacttgactgttatttaattccaacaaatga-tgggggggattcaaagaatgataaccgcggctaacatttctgcaaccaaaacaggtaatatgttgtat 17635439  T
Q  151 tgcaaacagataaaaat 167  Q
    |||||||||||||||||    
T  17635438 tgcaaacagataaaaat 17635422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 24245419 - 24245499
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaat 167  Q
    ||||||| ||||||||| |||| | || || |||||||||||||||||||| |||||||| ||||| ||||| ||||||||    
T  24245419 gggattcgaagaatcctaaccgttgcttacttttctgcaactaaaacaggtaaacttgctttgttggaaacaaataaaaat 24245499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 161
Target Start/End: Complemental strand, 26307879 - 26307761
Alignment:
Q  44 tgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa--c 141  Q
    |||||||||||||| ||||| |||| || |||| |||| |||| ||||||||||| ||||| |||||  |||||| ||||||||  ||||||  |||  |    
T  26307879 tgaataaaacttgattgttaagtaattctaacatataaatagatgggattcaaagtatcctaaccgccgctaaca-ttctgcaatcaaaacaactaaatc 26307781  T
Q  142 ttgctctgttgcaaacagat 161  Q
    ||||||||||||||| ||||    
T  26307780 ttgctctgttgcaaatagat 26307761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 83 - 172
Target Start/End: Original strand, 16523673 - 16523764
Alignment:
Q  83 tagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaactt-gctctgttgcaaacagataaaaatggcaa 172  Q
    |||| ||||||||||||||||| |||||| || || |||||  ||| |||| ||||||| || |||||||||||||||||||||||| ||||    
T  16523673 tagaggggattcaaagaatcctaaccgctgcttacttttctataacaaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 16523764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 28664954 - 28664905
Alignment:
Q  119 tttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaaat 167  Q
    |||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  28664954 tttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaat 28664905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 29263409 - 29263474
Alignment:
Q  39 taacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcct 104  Q
    |||||||||||| |||||||||||| |||| || ||||| ||| |||| ||||||| |||||||||    
T  29263409 taacatgaataagacttgactgttatgtaattctaacaattaaatagaggggattcgaagaatcct 29263474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 32417186 - 32417255
Alignment:
Q  51 aacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatt 120  Q
    |||||||||||||| ||| |||||||| ||| |||| ||||||| ||||||||| ||| | |||||||||    
T  32417186 aacttgactgttacttaattccaacaagtaaatagaggggattcgaagaatcctaaccaccactaacatt 32417255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 172
Target Start/End: Original strand, 17474529 - 17474605
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||| |||||| ||||||||| |||||| ||||||| |||| |  | ||||||||||||| |||||| ||||    
T  17474529 aagaatcctaaccgctgctaacatttttgcaaccaaaacagataacctattatgttgcaaacagaaaaaaattgcaa 17474605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 18208147 - 18208214
Alignment:
Q  109 gctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctcc 177  Q
    |||||| || |||||||||| ||| |||||||||||||||  ||||||||||||||||| |||| ||||    
T  18208147 gctacttacttttctgcaaccaaa-caggtaacttgctctactgcaaacagataaaaattgcaacctcc 18208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 79
Target Start/End: Original strand, 19085989 - 19086057
Alignment:
Q  11 tcatcacttaaagagcccttacgtgaattaacatgaataaaacttgactgttacgtaaatccaacaaat 79  Q
    |||||||||||| ||| ||||||| ||||||| ||||||| |||||||||||   ||||| ||||||||    
T  19085989 tcatcacttaaatagctcttacgttaattaacttgaataagacttgactgttgaataaatgcaacaaat 19086057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 34487836 - 34487773
Alignment:
Q  112 actaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| |||||||||| ||| || |||| ||||||||||| |||||||||||||| ||||||||    
T  34487836 actaacttttctgcaaccaaa-catgtaaattgctctgttgaaaacagataaaaattgcaatctc 34487773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 42 - 121
Target Start/End: Complemental strand, 15544318 - 15544239
Alignment:
Q  42 catgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacattt 121  Q
    ||||||| ||||||||||||||||||| || ||||| ||| |||| ||||||| | ||||||| || ||  |||||||||    
T  15544318 catgaatgaaacttgactgttacgtaattctaacaattaaatagaggggattcgaggaatcctaactgccgctaacattt 15544239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 24167461 - 24167539
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||||| || ||| |||||| ||||||||| |||| | |||| ||  | ||||||||||||||||||||    
T  24167461 gggattcaaagaatcctaactgctgctaaca-ttctgcaacaaaaaaaagtaatttattttgttgcaaacagataaaaat 24167539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 88 - 158
Target Start/End: Complemental strand, 34128859 - 34128788
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaaca 158  Q
    ||||||| ||||||||| |||| | || || |||||||||| ||||||||| |||||||||| |||||||||    
T  34128859 gggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctattgcaaaca 34128788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 167
Target Start/End: Complemental strand, 22755696 - 22755666
Alignment:
Q  137 gtaacttgctctgttgcaaacagataaaaat 167  Q
    |||||||||||||||||||||||||||||||    
T  22755696 gtaacttgctctgttgcaaacagataaaaat 22755666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 15375770 - 15375859
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaac-aggt-aacttgctctgttgcaaacagataaaaatggcaatct 175  Q
    ||||||| ||||||||| |||| |||| || ||| |||||| ||||  |||  |||||||||||||||||||| |||||||| |||||||    
T  15375770 gggattcgaagaatcctaaccgttacttacttttatgcaaccaaaaataggcgaacttgctctgttgcaaacaaataaaaattgcaatct 15375859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 172
Target Start/End: Complemental strand, 15690969 - 15690916
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||| ||||||||||| |||||||||| | |||| |||||||| ||||    
T  15690969 tttctgcaaccaaaacaggtaatttgctctgttacgaacaaataaaaattgcaa 15690916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 167
Target Start/End: Complemental strand, 26121084 - 26121008
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||| |||||| || ||| || || ||||||||||||| |||||||||| ||| || || |||||||||||||||||    
T  26121084 gattcgaagaattctaaccactgcttacatttctgcaac-aaaacaggtatctttctatgctgcaaacagataaaaat 26121008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 26835872 - 26835796
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaa 164  Q
    ||||||| ||||||||| || ||| |  || |||||||||| ||||||||||| || |||||||||||||||||||||    
T  26835872 gggattcgaagaatcctaactgctgcatacttttctgcaac-aaaacaggtaaattcgctctgttgcaaacagataaa 26835796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 20563969 - 20564053
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaactt-gctctgttgcaaacagataaaaatggcaa 172  Q
    ||||| ||||||||| || ||| || || |||||||||| |||| || |||| || |||||||||||||||||||||||| ||||    
T  20563969 gattcgaagaatcctaactgcttcttacttttctgcaaccaaaaacaagtaaatttgctctgttgcaaacagataaaaattgcaa 20564053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 22036169 - 22036205
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  22036169 tttattacttcgatataagttagtacacttgctaatt 22036205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 22039395 - 22039431
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  22039395 tttattacttcgatataagttagtacacttgctaatt 22039431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 24140651 - 24140579
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||||| |||| | || || |||||||||| |||| |||||| |||||||||| ||| ||||||||||||    
T  24140651 aagaatcctaaccgttgcttacttttctgcaaccaaaataggtaaacttgctctgtcgcacacagataaaaat 24140579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 7e-28; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 69 - 176
Target Start/End: Original strand, 21303211 - 21303318
Alignment:
Q  69 atccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatg 168  Q
    ||||||||||||| |||  |||||||||| |||||| |||||| || || |||||||||| |||||| |||||||||||||||||||||||||||||||     
T  21303211 atccaacaaataaataggggggattcaaataatcctaaccgctgcttacttttctgcaaccaaaacaagtaacttgctctgttgcaaacagataaaaatt 21303310  T
Q  169 gcaatctc 176  Q
    ||||||||    
T  21303311 gcaatctc 21303318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 69 - 176
Target Start/End: Complemental strand, 21325581 - 21325476
Alignment:
Q  69 atccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatg 168  Q
    ||||||||||||| |||  ||||| | ||||||| | ||||||||| || |||||||||| |||  |||||||||||||||||||||| ||||||||||     
T  21325581 atccaacaaataaatag--gggatgcgaagaatcataaccgctacttacttttctgcaaccaaattaggtaacttgctctgttgcaaatagataaaaatt 21325484  T
Q  169 gcaatctc 176  Q
    ||||||||    
T  21325483 gcaatctc 21325476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 87 - 176
Target Start/End: Original strand, 12805765 - 12805854
Alignment:
Q  87 agggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||| ||||||||| ||| || || || |||||||||| ||| ||||||| || ||||||||||||||||||||||| ||||||||    
T  12805765 agggattcgaagaatcctaacccctgcttacttttctgcaaccaaatcaggtaattttctctgttgcaaacagataaaaattgcaatctc 12805854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 83 - 167
Target Start/End: Original strand, 20023423 - 20023508
Alignment:
Q  83 tagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaaat 167  Q
    |||| ||||||||||||||||| || |||||| || |||||||||| ||||| ||||| || ||||||||||||||||||||||||    
T  20023423 tagaggggattcaaagaatcctaactgctacttacttttctgcaaccaaaactggtaaattcgctctgttgcaaacagataaaaat 20023508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 8446044 - 8445956
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||||||||| ||| || || ||||||||||||| ||   |||||||||| |||||||||||| ||||||||| ||||||||    
T  8446044 gggattcaaagaatcctaaccactgcttacatttctgcaaccaatggaggtaacttgttctgttgcaaactgataaaaattgcaatctc 8445956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 10745096 - 10745040
Alignment:
Q  116 acatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||    
T  10745096 acatttctgcaaccaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 10745040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 17438296 - 17438391
Alignment:
Q  78 ataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||| |||| ||||||| ||||||||| |||| | || || |||||||||| ||||||||| || |||||||||||||||||||||||||| ||||    
T  17438296 ataaatagaggggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaaattgctctgttgcaaacagataaaaattgcaa 17438391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 60 - 158
Target Start/End: Complemental strand, 8143864 - 8143767
Alignment:
Q  60 gttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaaca 158  Q
    ||||| ||| |||||||||||| |||  ||||||| ||||||||| |||| | || || |||||||||| ||||||||||||||| |||||||||||||    
T  8143864 gttacttaattccaacaaataaataggggggattccaagaatcctaaccgttgcttac-tttctgcaaccaaaacaggtaacttgttctgttgcaaaca 8143767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 4650449 - 4650364
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||| | || || |||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||    
T  4650449 gggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctccgttgcaaacagataaaaattgcaa 4650364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 8770231 - 8770146
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| || ||| || || |||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  8770231 gggattcgaagaatcctaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa 8770146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 173
Target Start/End: Complemental strand, 17156014 - 17155930
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    |||||||||| | |||| | ||||||| || |||||||||| |||  ||||||||||||||||||||||||||||||||| |||||    
T  17156014 gggattcaaatagtcctaatcgctacttacttttctgcaaccaaat-aggtaacttgctctgttgcaaacagataaaaattgcaat 17155930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 176
Target Start/End: Original strand, 21825745 - 21825833
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||| |||| ||   |||| || |||||||||| |||| |||||||||||| |||| ||||||||||||||| ||||||||    
T  21825745 gggattcaaagagtcctaactcttacttacttttctgcaaccaaaaaaggtaacttgctatgttacaaacagataaaaattgcaatctc 21825833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 41508590 - 41508506
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||| | ||||||  | || |||||||||| |||||| |||||||||| ||||||||||||||| |||| ||||    
T  41508590 gggattcaaagaatcttaaccgctggttacttttctgcaaccaaaacatgtaacttgctttgttgcaaacagatacaaattgcaa 41508506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 88 - 166
Target Start/End: Complemental strand, 8267154 - 8267076
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaa 166  Q
    |||||||||||| |||| ||||||||| || ||| |||||| |||| |||||| |||||||||||| |||||| |||||    
T  8267154 gggattcaaagagtcctaaccgctactgacttttatgcaaccaaaataggtaatttgctctgttgctaacagaaaaaaa 8267076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 8765329 - 8765244
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||| | || ||| || || |||||||||| ||||||||||| |||||||||||||||||| |||||||| ||||    
T  8765329 gggattcgaagaatcttaactgctgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaacatataaaaattgcaa 8765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 16245605 - 16245690
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||  ||||| || |||||| || || |||||||||| |||| ||||||||||||||||||||||| |||||||||| ||||    
T  16245605 gggattcggagaattctaaccgctgcttacttttctgcaaccaaaaacaggtaacttgctctgttgcaaatagataaaaattgcaa 16245690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 23049269 - 23049326
Alignment:
Q  180 ggatacgaatttatttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||||||||| | ||||||||| ||||||| |||| |||||||||||||||||||||    
T  23049269 ggatacgaattaaattattacttcgatataaattagtacacttgctaattttgtatca 23049326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 2167493 - 2167577
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| ||| || || || ||||  |||| ||||||||||||||| | |||||||||||||||||||| ||||    
T  2167493 gggattcgaagaatcctaaccacttcttacttttccacaaccaaaacaggtaacttggtatgttgcaaacagataaaaattgcaa 2167577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 18736555 - 18736627
Alignment:
Q  95 aaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    |||||||||| |||||| || |  |||||||||| ||||||||||||||| || |||||||||| ||||||||    
T  18736555 aaagaatcctaaccgctgcttatttttctgcaaccaaaacaggtaacttgttcggttgcaaacaaataaaaat 18736627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 23055995 - 23056071
Alignment:
Q  44 tgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatt 120  Q
    ||||||| |||||||||||| |||| ||||||||||||  | ||||||||| ||||||||| |||||  ||||||||    
T  23055995 tgaataagacttgactgttaagtaattccaacaaataaaaaaaagggattcgaagaatcctaaccgccgctaacatt 23056071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 3116326 - 3116380
Alignment:
Q  119 tttctgcaactaaaac-aggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||    
T  3116326 tttctgcaaccaaaaccaggtatcttgctctgttgcaaacagataaaaattgcaa 3116380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 91 - 167
Target Start/End: Complemental strand, 932963 - 932886
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    |||| |||||| || |||||| || || |||||||||| |||||| |||| |||||||||||||||||| ||||||||    
T  932963 attcgaagaatactaaccgctgcttacttttctgcaaccaaaacaagtaaacttgctctgttgcaaacaaataaaaat 932886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 12754798 - 12754879
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaac-aggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||| ||||||||| |||||| || || |||||||||| ||||| |||||| || ||||||||||||||| ||||||||    
T  12754798 gggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaccaggtaaactagctctgttgcaaacaaataaaaat 12754879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 17544630 - 17544573
Alignment:
Q  180 ggatacgaatttatttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    |||||| |||| | ||||||||| ||||||| |||| |||||||||||||||||||||    
T  17544630 ggatacaaattaaattattacttcgatataaattagtacacttgctaattttgtatca 17544573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 167
Target Start/End: Original strand, 2723753 - 2723789
Alignment:
Q  131 aaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    |||||||||||||||| ||||||||||||||||||||    
T  2723753 aaacaggtaacttgctttgttgcaaacagataaaaat 2723789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 172
Target Start/End: Original strand, 16229831 - 16229915
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaactt-gctctgttgcaaacagataaaaatggcaa 172  Q
    ||||| ||||||||| |||||| || || ||| |||||| |||| ||||||| || |||||||||||||||||||||||| ||||    
T  16229831 gattcgaagaatcctaaccgctgcttacttttttgcaaccaaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 16229915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 19925505 - 19925576
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaa-ctaaaacaggtaa-cttgctctgttgcaaacagataaaa 165  Q
    ||||||||| |||||| || || ||||||||| | ||||||||||| |||||||||||||||||| ||||||    
T  19925505 aagaatcctaaccgctgcttacttttctgcaaaccaaaacaggtaaacttgctctgttgcaaacatataaaa 19925576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 167
Target Start/End: Complemental strand, 5508515 - 5508478
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    |||||| |||||||||||| ||||||||||||||||||    
T  5508515 aaaacatgtaacttgctctattgcaaacagataaaaat 5508478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 6290123 - 6290051
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacaga 160  Q
    |||||||||| |||||| ||| |  |||||||| |||||| ||||||| ||||||| |||||||||||||||||    
T  6290123 gggattcaaataatcctaaccaccgctaacatt-ctgcaattaaaacaagtaactttgctctgttgcaaacaga 6290051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 8170095 - 8170014
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaactt-gctctgttgcaaacagataaaaat 167  Q
    ||||||| ||||||||| |||||| |  || |||||||||| |||| ||||||| || ||| ||||||||||||||||||||    
T  8170095 gggattcgaagaatcctaaccgctgcatacttttctgcaaccaaaaacaggtaaattcgctatgttgcaaacagataaaaat 8170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 21302143 - 21302062
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaa-ctaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||| ||||||||| ||||||  | |  ||||||||| | |||| |||||| |||||||||||||||||||||||||||    
T  21302143 gggattcgaagaatcctaaccgctgtttatttttctgcaatcaaaaaaaggtaaacttgctctgttgcaaacagataaaaat 21302062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 10557846 - 10557810
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  10557846 tttattacttcgatataagttagtacacttgctaatt 10557810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 19194051 - 19194095
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    |||||||||| |||||||||||| |||||||| |||||| |||||    
T  19194051 tttattacttcgatataagttagtacacttgcaaattttctatca 19194095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 39808 - 39720
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||| || | |||||| || || |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  39808 gggattcaaagagtcataaccgctgcttacttttctgcaaccaaaacaggtaacttgctctgttgcaaacagataaaaattgcaatctc 39720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 2e-22; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 45553384 - 45553268
Alignment:
Q  54 ttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgc 153  Q
    ||||||||||  ||| |||||||||| | |||  ||||||||||||||||| |||||| ||||| || ||||||| ||||||||||||||||| ||||||    
T  45553384 ttgactgttaaataattccaacaaatgaatagg-gggattcaaagaatcctaaccgctgctaacgtt-ctgcaaccaaaacaggtaacttgctatgttgc 45553287  T
Q  154 aaacagataaaaatggcaa 172  Q
    |||||||||||||| ||||    
T  45553286 aaacagataaaaattgcaa 45553268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 32085686 - 32085598
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| ||||| |||| |||||| || || |||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||    
T  32085686 gggatttaaagagtcctaaccgctgcttacttttctgcaaccaaaccaggtaacttgctctgttgcaaacagataaaaattgcaatctc 32085598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 17890178 - 17890076
Alignment:
Q  70 tccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatgg 169  Q
    |||||||||| | |||  |||||| |||||||| | | || | || ||||||||||||| ||||||||||||||||||||||||||||| |||||||| |    
T  17890178 tccaacaaatgaataggggggattgaaagaatcttaatcgttgcttacatttctgcaaccaaaacaggtaacttgctctgttgcaaacatataaaaattg 17890079  T
Q  170 caa 172  Q
    |||    
T  17890078 caa 17890076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 173
Target Start/End: Original strand, 23933421 - 23933506
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaat 173  Q
    ||||||||||||||||| |||||| || || ||| || ||| ||| || ||||||||||||||||||||||||||||||| |||||    
T  23933421 gggattcaaagaatcctaaccgctgcttacttttgtgaaaccaaaccaagtaacttgctctgttgcaaacagataaaaattgcaat 23933506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 27908994 - 27909079
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||||| || |  |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  27908994 gggattcgaagaatcctaaccgctgcttaattttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 27909079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 167
Target Start/End: Original strand, 45621722 - 45621837
Alignment:
Q  52 acttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgt 150  Q
    ||||||||||||  ||| |||||||||| | |||| ||||||||||||||| | |||||  |||||| ||||||||  |||||| || |||||||| |||    
T  45621722 acttgactgttaattaattccaacaaatgaatagaggggattcaaagaatcttaaccgccgctaaca-ttctgcaatcaaaacaagtaaacttgctatgt 45621820  T
Q  151 tgcaaacagataaaaat 167  Q
    |||||||||||||||||    
T  45621821 tgcaaacagataaaaat 45621837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 17349592 - 17349486
Alignment:
Q  69 atccaacaa-ataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaa 165  Q
    ||||||||| |||| |||| ||||||| |||||| ||||||||| || || ||| |||||| |||| || |||| |||||||||||||||||||||||||    
T  17349592 atccaacaatataaatagaggggattcgaagaattctgaccgctgcttacttttttgcaaccaaaaacaagtaaacttgctctgttgcaaacagataaaa 17349493  T
Q  166 atggcaa 172  Q
    || ||||    
T  17349492 attgcaa 17349486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 17675535 - 17675589
Alignment:
Q  119 tttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  17675535 tttctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 17675589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 25530659 - 25530574
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||||| || ||  || |||||| ||||||||||| || |||||||||||||||||||||||| ||||    
T  25530659 gggattcgaagaatcctaaccgctgcttactattttgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 25530574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 25618779 - 25618694
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| |||||| |  |||||| || || |||||||||| ||||||||||| ||| ||||||||||||||||||||||| ||||    
T  25618779 gggattcgaagaattcgaaccgctgcttacttttctgcaaccaaaacaggtaaactttctctgttgcaaacagataaaaattgcaa 25618694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 26603235 - 26603320
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||||| || || ||||| |||| |||| |||||||  ||||||||||||||||||||||||| ||||    
T  26603235 gggattcgaagaatcctaaccgctgcttacttttctacaaccaaaaacaggtaaactgctctgttgcaaacagataaaaattgcaa 26603320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 28925745 - 28925660
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| ||| || || || |||||||||| ||||||||| |||||||| ||||||||||| |||||||| ||||    
T  28925745 gggattcgaagaatcctaacctctgcttacttttctgcaaccaaaacaggtaaacttgctatgttgcaaacaaataaaaattgcaa 28925660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 29027688 - 29027631
Alignment:
Q  119 tttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||| ||| ||||| ||||||||| |||||||||||||||||| ||||||||    
T  29027688 tttctgcaaccaaatcaggtcacttgctctcttgcaaacagataaaaattgcaatctc 29027631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 29719092 - 29719193
Alignment:
Q  73 aacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaa-acaggtaa-cttgctctgttgcaaacagataaaaatggc 170  Q
    ||||||||| |||| ||||||| ||||||||| || ||| || || |||||||||| ||| |||||||| |||||||||||||| ||| |||||||| ||    
T  29719092 aacaaataaatagaggggattcgaagaatcctaactgctgcttacttttctgcaaccaaacacaggtaaacttgctctgttgcatacatataaaaattgc 29719191  T
Q  171 aa 172  Q
    ||    
T  29719192 aa 29719193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 17635683 - 17635735
Alignment:
Q  121 tctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  17635683 tctgcaaccaaaacaggtaaacttgctctgttgcaaacagataaaaattgcaa 17635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 172
Target Start/End: Original strand, 25887822 - 25887864
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||| ||||||||||||||||||||||||||||||||| ||||    
T  25887822 aaaataggtaacttgctctgttgcaaacagataaaaattgcaa 25887864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 30411891 - 30411805
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| || |||||| |||||| || || |||||||||| |||| || |||| ||||||||||||||||||||||||||| ||||    
T  30411891 gggattcgaaaaatcctaaccgctgcttacttttctgcaaccaaaaacatgtaaacttgctctgttgcaaacagataaaaattgcaa 30411805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 9239412 - 9239348
Alignment:
Q  39 taacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcct 104  Q
    |||||||||||| |||||| |||||||||| |||||||| ||| || | |||||||||||||||||    
T  9239412 taacatgaataatacttgattgttacgtaattccaacaattaaata-aggggattcaaagaatcct 9239348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 20174554 - 20174599
Alignment:
Q  131 aaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||| ||||||||||||||||||||||||||  |||||||    
T  20174554 aaacaggtaatttgctctgttgcaaacagataaaaattccaatctc 20174599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 29143173 - 29143088
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||| | ||||||  | || ||||| |||| |||| |||||| ||||||||||||||||||||||||||| ||||    
T  29143173 gggattcgaagaatcttaaccgctgtttacttttctacaaccaaaataggtaaacttgctctgttgcaaacagataaaaattgcaa 29143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 33749730 - 33749774
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    |||||||||| |||||||||||| ||||||||||| |||||||||    
T  33749730 tttattacttcgatataagttagtacacttgctaaatttgtatca 33749774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 6276966 - 6276923
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatc 236  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||    
T  6276966 tttattacttcgatataagttagtacacttgctaattttttatc 6276923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 130 - 165
Target Start/End: Original strand, 11382671 - 11382706
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaa 165  Q
    |||||| |||||||||||||||||||||||||||||    
T  11382671 aaaacaagtaacttgctctgttgcaaacagataaaa 11382706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 16881604 - 16881642
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatttt 231  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  16881604 tttattacttcgatataagttagtacacttgctaatttt 16881642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 231
Target Start/End: Original strand, 17039294 - 17039332
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatttt 231  Q
    |||||||||| |||||||||||| |||||||||||||||    
T  17039294 tttattacttcgatataagttagtacacttgctaatttt 17039332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 19287597 - 19287500
Alignment:
Q  43 atgaataaaacttgactgttacgtaaatccaacaaataagtaga-agggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa 140  Q
    |||||||| ||| |||| ||||||||||| ||||| ||| ||||  |||||| |||||||||| ||| || |||||| ||||||||  |||||||||||    
T  19287597 atgaataagactagacttttacgtaaatctaacaattaaatagagggggattaaaagaatcctaaccactgctaaca-ttctgcaatgaaaacaggtaa 19287500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 15339472 - 15339376
Alignment:
Q  78 ataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||| |||| ||||||  ||||||||| || ||| || || |||||||||| |||| ||| ||| |||||||||||||||||| |||||||| ||||    
T  15339472 ataaatagaggggatttgaagaatcctaactgctgcttacttttctgcaacaaaaaacagataaacttgctctgttgcaaacaaataaaaattgcaa 15339376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 96 - 167
Target Start/End: Complemental strand, 25196226 - 25196154
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||||| ||| || || || ||| |||||| ||||||||||| |||||| ||||||||||| ||||||||    
T  25196226 aagaatcctaaccactgcttacttttttgcaaccaaaacaggtaaacttgctatgttgcaaacatataaaaat 25196154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 35077227 - 35077263
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  35077227 tttattacttcgatataagttagtacacttgctaatt 35077263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Original strand, 35080485 - 35080521
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  35080485 tttattacttcgatataagttagtacacttgctaatt 35080521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 1e-20; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 9642101 - 9642022
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||||||  | |||||| ||||||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  9642101 gggattcaaagaattttaaccgctgctaacatttctgcaactaaaacaagtaatttgctctgttgcaagcagataaaaat 9642022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 158
Target Start/End: Complemental strand, 5851214 - 5851091
Alignment:
Q  39 taacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacat--ttctgcaactaaaacag 136  Q
    |||||||||||| |||||||||||| |||| |||||||| ||   ||| ||||||| ||||||||| |||||  |||||||  |||||||| ||||||||    
T  5851214 taacatgaataagacttgactgttaagtaattccaacaactagacagaggggattcgaagaatcctaaccgccgctaacattattctgcaattaaaacag 5851115  T
Q  137 gtaa--cttgctctgttgcaaaca 158  Q
    ||||   |||||| ||||||||||    
T  5851114 gtaaattttgctccgttgcaaaca 5851091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 7983804 - 7983715
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctcc 177  Q
    |||||||||||||||||  ||| | || || |||||||||| ||| |||| |||||||| ||| |||||||||||||||| |||||||||    
T  7983804 gggattcaaagaatcctacccgttgcttacttttctgcaaccaaaccaggcaacttgctatgtcgcaaacagataaaaattgcaatctcc 7983715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 14528354 - 14528284
Alignment:
Q  106 accgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| || || |||||||||| ||| ||||||||||||| |||||||||||| ||||||| ||||||||    
T  14528354 accgctgcttacttttctgcaaccaaaccaggtaacttgctttgttgcaaacagctaaaaattgcaatctc 14528284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 161
Target Start/End: Complemental strand, 15239056 - 15238948
Alignment:
Q  52 acttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaac-ttgctctgt 150  Q
    |||||||| |||  ||| |||||||||||| |||| ||||||||||||||||| |||||  | |||| |||||||| | ||||||||||| ||||| |||    
T  15239056 acttgactcttatttaattccaacaaataaatagaggggattcaaagaatcctaaccgcctcgaaca-ttctgcaa-tcaaacaggtaactttgctatgt 15238959  T
Q  151 tgcaaacagat 161  Q
    |||||||||||    
T  15238958 tgcaaacagat 15238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 25182346 - 25182392
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  25182346 aaaacaggtaacttgctctgttgcaaatagataaaaattgcaatctc 25182392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 13698035 - 13697990
Alignment:
Q  131 aaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||    
T  13698035 aaacaggtaacttgctctgttgcaaagagataaaaattgcaatctc 13697990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 23893089 - 23893174
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||||||| ||  ||| | || |||||||||| ||||||||| || ||||| |||||||||||||||||||| ||||    
T  23893089 gggattcaaagaatcctaactactagttacttttctgcaaccaaaacaggtaaatttgctttgttgcaaacagataaaaattgcaa 23893174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 18448460 - 18448496
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaa 166  Q
    |||||||||||||||||||||||||||||||||||||    
T  18448460 aaaacaggtaacttgctctgttgcaaacagataaaaa 18448496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 173
Target Start/End: Original strand, 30122012 - 30122115
Alignment:
Q  70 tccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatgg 169  Q
    |||||||||||| |||  || ||||||||| |  | ||| || || || |||||||||| |||| ||||||||| ||||||| ||||||||||||||| |    
T  30122012 tccaacaaataaatagggggaattcaaagagttataaccactgcttacttttctgcaaccaaaataggtaacttactctgttacaaacagataaaaattg 30122111  T
Q  170 caat 173  Q
    ||||    
T  30122112 caat 30122115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 19786912 - 19786866
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| |||||||||||||||||||||||||||||||  |||||||    
T  19786912 aaaacatgtaacttgctctgttgcaaacagataaaaattacaatctc 19786866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 24114159 - 24114244
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||||| || || |||| |  || ||||||||||| ||||||||| ||||||||||||||||| ||||    
T  24114159 gggattcgaagaatcctaaccgctgcttacttttcagataccaaaacaggtaaacttgctctgctgcaaacagataaaaattgcaa 24114244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 164
Target Start/End: Complemental strand, 24269820 - 24269743
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaa 164  Q
    ||||||| ||||||||| |||||| || || |||||||||| |||| |||||||  | ||||||||||||||||||||    
T  24269820 gggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaaacaggtaaactactctgttgcaaacagataaa 24269743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 176
Target Start/End: Original strand, 44010907 - 44010988
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||| | ||||||||| ||  ||||||||| |||| || |||||||| ||||||||||||| |||||||| ||||||||    
T  44010907 aagaatcttaaccgctacttactcttctgcaaccaaaaacatgtaacttgttctgttgcaaacatataaaaattgcaatctc 44010988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 5952437 - 5952481
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||    
T  5952437 tttattacttcgatataagttagtacacttgctaattatgtatca 5952481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 2847623 - 2847580
Alignment:
Q  194 ttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||||||| |||||||||||| ||||||||||||||| |||||    
T  2847623 ttattacttcgatataagttagtacacttgctaattttctatca 2847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 18569276 - 18569193
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    |||||||| |||| | |||||| || || |||||||||| |||||| |||| || ||| |||||||||||||||||||| ||||    
T  18569276 gattcaaaaaatcgtaaccgctgcttacttttctgcaaccaaaacaagtaaactcgctatgttgcaaacagataaaaatagcaa 18569193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 167
Target Start/End: Original strand, 17101823 - 17101861
Alignment:
Q  130 aaaacaggtaa-cttgctctgttgcaaacagataaaaat 167  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  17101823 aaaacaggtaaacttgctctgttgcaaacagataaaaat 17101861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 24110545 - 24110623
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaa 165  Q
    ||||||| || |||||| ||| || || || |||||||||| ||||||| ||| ||| |||||||||||||||||||||    
T  24110545 gggattcgaataatcctaacccctgcttacttttctgcaaccaaaacagataaacttcctctgttgcaaacagataaaa 24110623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 26394574 - 26394644
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaac 157  Q
    ||||||| ||||||||| |||| | || || |||||||||| ||||||||| |||||||| ||||||||||    
T  26394574 gggattcgaagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctttgttgcaaac 26394644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 31288596 - 31288530
Alignment:
Q  54 ttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatt 120  Q
    ||||||||||| ||| |||||||| ||| |||| |||||||||| |||||| |||||  ||||||||    
T  31288596 ttgactgttacataattccaacaattaaatagaggggattcaaataatcctaaccgccgctaacatt 31288530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 172
Target Start/End: Complemental strand, 6885153 - 6885096
Alignment:
Q  116 acatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||||| |||| |||||||||| |||| || ||||||||||||||| ||||    
T  6885153 acatttctgcaaccaaaaacaggtaacttactctattacaaacagataaaaattgcaa 6885096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 16404124 - 16404039
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||||| || |  |||||||| | |||| |||||| || ||||||||||||||| |||||||| ||||    
T  16404124 gggattcgaagaatcctaaccgctgcttatttttctgcagccaaaataggtaaattcgctctgttgcaaacaaataaaaattgcaa 16404039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 654 - 569
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaactt-gctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| |||||| || || |||||||||| ||||||||||| || |||||||||||||||||||||||| ||||    
T  654 gggattcgaagaatcctaaccgctgcttacttttctgcaaccaaaacaggtaaattcgctctgttgcaaacagataaaaattgcaa 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 35780 - 35677
Alignment:
Q  69 atccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatg 168  Q
    ||||||||||||| || | ||||||  ||||||| | |||||| || || |||||||||| ||||||||||||||||| ||||||| ||| ||||||||     
T  35780 atccaacaaataaatataggggatttgaagaatcttaaccgctgcttacctttctgcaaccaaaacaggtaacttgctttgttgcagacaaataaaaatt 35681  T
Q  169 gcaa 172  Q
    ||||    
T  35680 gcaa 35677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 43145 - 43191
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  43145 aaaacaggtaacttgctctgttgcaaacagataaaaattgcaatctc 43191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 21492 - 21403
Alignment:
Q  84 agaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt-aacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||||| ||||||||| | ||||||| || |||||| ||| ||||||||| ||||| |||||||||||||| |||||||| ||||    
T  21492 agaagggattcgaagaatcctaatcgctacttacttttctgaaaccaaaacaggtaaacttcctctgttgcaaacaaataaaaattgcaa 21403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 25190 - 25113
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaacaggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||||| |||| | || || |||||||||| ||||||||||| |||||||||||||||| ||| |||||| ||||    
T  25190 aagaatcctaaccgttgcttacttttctgcaaccaaaacaggtaaacttgctctgttgcaaatagagaaaaattgcaa 25113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 161
Target Start/End: Original strand, 15293 - 15416
Alignment:
Q  39 taacatgaataaaacttgactgttacgtaaatccaacaaataagtagaagggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggt 138  Q
    |||||||||||| ||||||||||||  ||| ||||||||  ||||||| | ||||| ||||||||| ||||   |||||| ||||||||  |||||||||    
T  15293 taacatgaataagacttgactgttaaataattccaacaaccaagtagaggagattcgaagaatcctaaccgtcgctaaca-ttctgcaatcaaaacaggt 15391  T
Q  139 -aactt-gctctgttgcaaacagat 161  Q
     ||||| ||||||||||||||||||    
T  15392 aaacttcgctctgttgcaaacagat 15416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 168217 - 168263
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||| ||||||||||||||||||||||||||||||| | ||||||    
T  168217 aaaacaagtaacttgctctgttgcaaacagataaaaattgaaatctc 168263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 175
Target Start/End: Original strand, 705 - 786
Alignment:
Q  96 aagaatcctgaccgctactaacatttctgcaactaaaa-caggtaa-cttgctctgttgcaaacagataaaaatggcaatct 175  Q
    ||||||| | |||||| || || |||||||||| |||| ||||||| ||| ||||||||||||||||||||||| |||||||    
T  705 aagaatcttaaccgcttcttacttttctgcaaccaaaaacaggtaaactttctctgttgcaaacagataaaaattgcaatct 786  T

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Target: scaffold0263 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 15870 - 15785
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaa-caggtaacttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| |||||| || |||||| || || |||| ||||| |||| |||||||||||||||||||||||  ||||||||| ||||    
T  15870 gggattcgaagaatactaaccgctgcttacttttccgcaaccaaaaacaggtaacttgctctgttgcaaattgataaaaattgcaa 15785  T

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Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 90 - 167
Target Start/End: Original strand, 89731 - 89808
Alignment:
Q  90 gattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaat 167  Q
    |||| ||||| |||| |||||| || |  |||||||||| ||||||||||||||| || |||||||||||||| ||||    
T  89731 gatttaaagagtcctaaccgctgcttatttttctgcaaccaaaacaggtaacttgttcggttgcaaacagatagaaat 89808  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 238
Target Start/End: Original strand, 157408 - 157453
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatcac 238  Q
    |||||||||| |||||||||||| ||| ||||||||||||||||||    
T  157408 tttattacttcgatataagttagtacatttgctaattttgtatcac 157453  T

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Target: scaffold2047 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold2047
Description:

Target: scaffold2047; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 579 - 535
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||||||||||||||||||||| |||||| |||| |||||||||    
T  579 tttattactttgatataagttagtacactttctaaatttgtatca 535  T

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Target: scaffold0386 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 172
Target Start/End: Original strand, 5980 - 6066
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaa-ctaaaacaggtaactt-gctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| |||||||||||||| |||| || ||||| ||| | |||||| |||| || ||||| |||||||||||||||||| ||||    
T  5980 gggattcgaagaatcctgaccgttacttacttttctacaaccaaaaacaagtaaattcgctctattgcaaacagataaaaattgcaa 6066  T

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Target: scaffold0351 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 5682 - 5728
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||| ||| ||| |||||||||||||||||| ||||||||    
T  5682 aaaacaggtaatttggtctattgcaaacagataaaaattgcaatctc 5728  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 88 - 172
Target Start/End: Complemental strand, 72234 - 72148
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaac-aggtaa-cttgctctgttgcaaacagataaaaatggcaa 172  Q
    ||||||| ||||||||| ||  || || || |||||||||||||||  | |||| ||||||||||||||||||||||||||| ||||    
T  72234 gggattcgaagaatccttactactgcttacttttctgcaactaaaaatacgtaaacttgctctgttgcaaacagataaaaattgcaa 72148  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 114669 - 114623
Alignment:
Q  130 aaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    ||||||||||| ||| ||||||||||||||||||||||  |||||||    
T  114669 aaaacaggtaatttggtctgttgcaaacagataaaaattacaatctc 114623  T

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Target: scaffold0838 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 2548 - 2515
Alignment:
Q  131 aaacaggtaacttgctctgttgcaaacagataaa 164  Q
    ||||||||||||| ||||||||||||||||||||    
T  2548 aaacaggtaactttctctgttgcaaacagataaa 2515  T

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Target: scaffold0832 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 2579 - 2546
Alignment:
Q  131 aaacaggtaacttgctctgttgcaaacagataaa 164  Q
    ||||||||||||| ||||||||||||||||||||    
T  2579 aaacaggtaactttctctgttgcaaacagataaa 2546  T

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Target: scaffold0086 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 24238 - 24295
Alignment:
Q  180 ggatacgaatttatttattactttgatataagttagaacacttgctaattttgtatca 237  Q
    ||||||||||| | ||||||||| ||||||| |||  ||||||||||||||| |||||    
T  24238 ggatacgaattaaattattacttcgatataaattaatacacttgctaattttctatca 24295  T

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Target: scaffold0884 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 193 - 229
Target Start/End: Complemental strand, 4333 - 4297
Alignment:
Q  193 tttattactttgatataagttagaacacttgctaatt 229  Q
    |||||||||| |||||||||||| |||||||||||||    
T  4333 tttattacttcgatataagttagtacacttgctaatt 4297  T

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Target: scaffold0622 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 88 - 176
Target Start/End: Complemental strand, 951 - 864
Alignment:
Q  88 gggattcaaagaatcctgaccgctactaacatttctgcaactaaaacaggtaacttgctctgttgcaaacagataaaaatggcaatctc 176  Q
    |||||||||||| |||| |||||| || |  ||||| |||| ||| |||||| ||| ||||||||||||||| ||||||| | ||||||    
T  951 gggattcaaagagtcctaaccgctgcttagttttctacaaccaaa-caggtatcttactctgttgcaaacaggtaaaaattgaaatctc 864  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 69301 - 69217
Alignment:
Q  91 attcaaagaatcctgaccgctactaacatttctgcaactaa-aacaggtaa-cttgctctgttgcaaacagataaaaatggcaat 173  Q
    |||| ||||||||| |||||| || |  ||||||||  ||| ||||||||| ||| ||||||||||||||||||||||| |||||    
T  69301 attctaagaatcctaaccgctgcttatttttctgcatgtaagaacaggtaaactttctctgttgcaaacagataaaaattgcaat 69217  T

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