View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19191_high_4 (Length: 340)
Name: NF19191_high_4
Description: NF19191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19191_high_4 |
 |  |
|
| [»] scaffold0045 (1 HSPs) |
 |  |  |
|
| [»] scaffold0025 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 9 - 317
Target Start/End: Complemental strand, 5182453 - 5182145
Alignment:
| Q |
9 |
gaaatgaagatagaaatgtgaaggttagaaagaatatatatttttaagtttcaatgaaccatcttctattgaatttctcaagaatttttccccaaagctt |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5182453 |
gaaatgaagatagaaatgtgaaggttagaaagaatagatttttttaagtttcaatgaaccatcttctattgaatttctcaagaatttttccccaaagctt |
5182354 |
T |
 |
| Q |
109 |
aattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactaggagcactagaaataagagaagtggagaaagattcagaaata |
208 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5182353 |
aattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactaggagcactagaaataagagaagtggagaaagattcagaaata |
5182254 |
T |
 |
| Q |
209 |
tgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttga |
308 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |
|
|
| T |
5182253 |
tgagaccgcgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcacctcttacaataaaaactctctcatttga |
5182154 |
T |
 |
| Q |
309 |
tatgtcctc |
317 |
Q |
| |
|
||||||||| |
|
|
| T |
5182153 |
tatgtcctc |
5182145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 3772639 - 3772595
Alignment:
| Q |
273 |
cctctcatctctcacaataaaaactctctcatttgatatgtcctc |
317 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
3772639 |
cctctcatctctcacaataaaaaacctctcatttgatatgccctc |
3772595 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 15893908 - 15893858
Alignment:
| Q |
266 |
atttagtcctctcatctctcacaataaaaactc-tctcatttgatatgtcct |
316 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||| |||||||||||||||||| |
|
|
| T |
15893908 |
atttaatcctctcatctctcacaat-aaaactcatctcatttgatatgtcct |
15893858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 11766450 - 11766414
Alignment:
| Q |
259 |
ggttataatttagtcctctcatctctcacaataaaaa |
295 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
11766450 |
ggttatattttagtcctctcacctctcacaataaaaa |
11766414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 13784880 - 13784936
Alignment:
| Q |
238 |
aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaa |
294 |
Q |
| |
|
|||| |||| ||||||| || |||||| |||| ||||||||||||||||||||||| |
|
|
| T |
13784880 |
aaccgttaaaattgatccaaaggttatggtttaatcctctcatctctcacaataaaa |
13784936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 23902831 - 23902775
Alignment:
| Q |
238 |
aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaa |
294 |
Q |
| |
|
|||| |||| ||||||| || |||||| |||| ||||||||||||||||||||||| |
|
|
| T |
23902831 |
aaccgttaaaattgatccaaaggttatggtttaatcctctcatctctcacaataaaa |
23902775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 315
Target Start/End: Complemental strand, 29430222 - 29429919
Alignment:
| Q |
9 |
gaaatgaagatagaaatgtgaaggttagaaagaatatatatttttaagtttcaatgaaccatcttctattgaatttctcaagaatttttccccaaagctt |
108 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| ||||||||| ||| |
|
|
| T |
29430222 |
gaaatgaagatagaaatgtgaaggttcgaaagaatagatttttttaagtttcgataaaccatcttctatggaatttctcaagaattattccccaaaactt |
29430123 |
T |
 |
| Q |
109 |
aattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactaggagcactagaaataagagaagtggagaaagattcagaaata |
208 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
29430122 |
aatttcatggatgtagaacctccactttgagttgtgacgtga---ggaaggagaactaggagcactggaaataagagaagtggagaaagattcagaaata |
29430026 |
T |
 |
| Q |
209 |
tgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttga |
308 |
Q |
| |
|
||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
29430025 |
tgagaccactagttcccaaatgtcatatgaaccattaagattgatctaatggttatagtttagtcctctcacctctcacaataaaaaccctctcatttga |
29429926 |
T |
 |
| Q |
309 |
tatgtcc |
315 |
Q |
| |
|
||||||| |
|
|
| T |
29429925 |
tatgtcc |
29429919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 36501611 - 36501670
Alignment:
| Q |
243 |
ttaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctc |
302 |
Q |
| |
|
|||||||||||| || |||| | | ||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
36501611 |
ttaagattgatccaagggttgtgacttaatcctctcatctctcacaataaaaaccctctc |
36501670 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 1489652 - 1489698
Alignment:
| Q |
272 |
tcctctcatctctcacaataaaaa-ctctctcatttgatatgtcctc |
317 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||| |||| |
|
|
| T |
1489652 |
tcctctcatctctcacaataaaaagccctctcatttgatatgccctc |
1489698 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 35419433 - 35419387
Alignment:
| Q |
272 |
tcctctcatctctcacaataaaaa-ctctctcatttgatatgtcctc |
317 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
35419433 |
tcctctcatctctcacaataaaaagccctctcacttgatatgtcctc |
35419387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 22476053 - 22476117
Alignment:
| Q |
251 |
gatctaatggttataatttagtcctctcatctctcacaataaaaact-ctctcatttgatatgtc |
314 |
Q |
| |
|
|||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||||||| ||||| |
|
|
| T |
22476053 |
gatccaatggttattattaagtcctctcatctctcataataatcactcctctcatttgaaatgtc |
22476117 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 317
Target Start/End: Original strand, 1897400 - 1897706
Alignment:
| Q |
9 |
gaaatgaagatagaaatgtgaaggttagaaagaatatatatttttaagtttcaatgaaccatcttctattgaatttctcaagaatttttccccaaagctt |
108 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| || ||||||| |||| ||| |||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
1897400 |
gaaatgaagatagaaatgtgaaggttcgaaagaatagatttttttaaatttcgatgcaccatcttctattgaatttctcaaaaattt--ccccaaagctt |
1897497 |
T |
 |
| Q |
109 |
aattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactaggagcactagaaataagagaagtggagaaagattcagaaata |
208 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
1897498 |
aattttatggatgtagaacctccactttgagttatgacgtgatgaggaaggagaactaggagcaccggaaataagagaagtggagaaagattcagaaata |
1897597 |
T |
 |
| Q |
209 |
tgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttga |
308 |
Q |
| |
|
|||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| | |
|
|
| T |
1897598 |
tgagaccatgggttcccaaatgtcatatcaaccattaagattgatctaatggttataatttagtcctctcacctcttacaataaaaaccctctcatttaa |
1897697 |
T |
 |
| Q |
309 |
tatgtcctc |
317 |
Q |
| |
|
||||||||| |
|
|
| T |
1897698 |
tatgtcctc |
1897706 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 82 - 302
Target Start/End: Original strand, 16914111 - 16914337
Alignment:
| Q |
82 |
tttctcaagaatttttccccaaagcttaattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactag-------gagcact |
174 |
Q |
| |
|
||||| ||||||| ||||| |||| |||||| |||| |||||||||||||||| |||||||||| |||| || | || |||||||| ||| ||| |
|
|
| T |
16914111 |
tttctaaagaattcttccctaaagtttaatttcatgaatgtagaacctccactgtgagttgtgatgtgaggaaggag-agaactagaataaaggagaact |
16914209 |
T |
 |
| Q |
175 |
agaaataagagaagtggagaaagattcagaaatatgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcc |
274 |
Q |
| |
|
||||||| | |||||||| | |||||| ||| | ||| |||||| |||||||||||| |||| ||||||||||||||||||||||||| || | |
|
|
| T |
16914210 |
ggaaataataaaagtggaggacgattcaagaatgtaagatcacgtgcatacaaatgtcatatgaacctttaagattgatctaatggttataatataactc |
16914309 |
T |
 |
| Q |
275 |
tctcatctctcacaataaaaactctctc |
302 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
16914310 |
tctcatctctcacaataaaaaccctctc |
16914337 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 39933556 - 39933626
Alignment:
| Q |
247 |
gattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtcctc |
317 |
Q |
| |
|
|||||||| || |||||| ||||| ||||| |||||||||||||||||| ||||||||| ||||| |||| |
|
|
| T |
39933556 |
gattgatccaagggttatgatttaaccctcttatctctcacaataaaaacactctcatttaatatgccctc |
39933626 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 40269650 - 40269726
Alignment:
| Q |
238 |
aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtc |
314 |
Q |
| |
|
||||||||| ||| ||| ||||||||||||| | ||||||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
40269650 |
aaccattaacattcatccaatggttataattaaaccctctcatctctcgtaataagactcctctcatttgatatgtc |
40269726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 109 - 317
Target Start/End: Original strand, 6050592 - 6050804
Alignment:
| Q |
109 |
aattccatggatgtagaacc-tccactttgagttgtgacgtgatgaggaaggagaactagga----gcactagaaataagagaagtggagaaagattcag |
203 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||| |||| || | || |||||| | | | ||| |||||| ||||||||||| | ||||||| |
|
|
| T |
6050592 |
aatttcatggatgtagaaccctccactttgagttgtgatgtgaggaaggag-agaactggaatacagaactggaaatatgagaagtggaggacgattcag |
6050690 |
T |
 |
| Q |
204 |
aaatatgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctca |
303 |
Q |
| |
|
| | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||| |
|
|
| T |
6050691 |
tagtgtgagaccacgtgttcacaaatgtcatatgaaccattaagattgatctaatggttataatttagtcctctcatctcttaccataaaaatcctctca |
6050790 |
T |
 |
| Q |
304 |
tttgatatgtcctc |
317 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
6050791 |
tttgatatgtcctc |
6050804 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 33352099 - 33352160
Alignment:
| Q |
257 |
atggttataatttagtcctctcatctctcacaataaaaactc-tctcatttgatatgtcctc |
317 |
Q |
| |
|
|||||||| | ||| |||||||||||||||| |||| ||||| ||||| ||||||||||||| |
|
|
| T |
33352099 |
atggttattaattactcctctcatctctcactataacaactcatctcacttgatatgtcctc |
33352160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 23347079 - 23347000
Alignment:
| Q |
238 |
aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtcctc |
317 |
Q |
| |
|
|||| |||| |||||| || |||||||||||| |||||||||||| | |||||||| ||||||| ||||||||||||| |
|
|
| T |
23347079 |
aaccgttaatattgattcaagggttataatttaaccctctcatctcttataataaaaaatctctcacttgatatgtcctc |
23347000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 15248949 - 15248871
Alignment:
| Q |
238 |
aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtcct |
316 |
Q |
| |
|
||||||||| ||| ||| || |||||| ||||| ||||||||||||||| ||||| | |||||| |||||||||||| |
|
|
| T |
15248949 |
aaccattaatattaatccaagggttatgatttaaccctctcatctctcactgtaaaagccctctcacttgatatgtcct |
15248871 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 36681587 - 36681525
Alignment:
| Q |
256 |
aatggttataatttagtcctctcatctctcacaataaaaact-ctctcatttgatatgtcctc |
317 |
Q |
| |
|
||||||||| | ||| |||||||||||||||| |||| |||| |||||| ||||||||||||| |
|
|
| T |
36681587 |
aatggttattaattactcctctcatctctcactataacaactcctctcacttgatatgtcctc |
36681525 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 51184583 - 51184533
Alignment:
| Q |
246 |
agattgatctaatggttataatttagtcctctcatctctcacaataaaaac |
296 |
Q |
| |
|
|||| |||| || |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
51184583 |
agatcgatccaaaggttataatttaaccctctcatctctcacaataaaaac |
51184533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 39921753 - 39921822
Alignment:
| Q |
243 |
ttaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatg |
312 |
Q |
| |
|
|||| ||| |||||| ||| ||||||||||||||||||||||| |||||||| |||| |||||||||| |
|
|
| T |
39921753 |
ttaatattaatctaaaggtcataatttagtcctctcatctctcgcaataaaagtcctcttatttgatatg |
39921822 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 37550931 - 37550992
Alignment:
| Q |
257 |
atggttataatttagtcctctcatctctcacaataaaaact-ctctcatttgatatgtcctc |
317 |
Q |
| |
|
|||||||| | ||| |||||||||||||||| |||| |||| |||||| ||||||||||||| |
|
|
| T |
37550931 |
atggttattaattactcctctcatctctcactataacaactcctctcacttgatatgtcctc |
37550992 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 317
Target Start/End: Original strand, 30373065 - 30373144
Alignment:
| Q |
238 |
aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtcctc |
317 |
Q |
| |
|
|||| |||||||||||| || |||| ||||||| ||||||||||||| ||||||||| |||||| |||| ||| |||| |
|
|
| T |
30373065 |
aaccgttaagattgatccaagggttgtaatttaacactctcatctctcataataaaaaccctctcacttgaaatgccctc |
30373144 |
T |
 |
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Target: chr2 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 294
Target Start/End: Complemental strand, 37488144 - 37488113
Alignment:
| Q |
263 |
ataatttagtcctctcatctctcacaataaaa |
294 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
37488144 |
ataatttagtcctctcatctctcacaataaaa |
37488113 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 3769320 - 3769390
Alignment:
| Q |
238 |
aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttga |
308 |
Q |
| |
|
|||| |||||||||||| || |||| ||| ||| ||||||||||||||||||||||| |||||| |||| |
|
|
| T |
3769320 |
aaccgttaagattgatccaagggttgtaacttaacactctcatctctcacaataaaaaccctctcacttga |
3769390 |
T |
 |
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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:
Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 14860 - 14819
Alignment:
| Q |
251 |
gatctaatggttataatttagtcctctcatctctcacaataa |
292 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||| ||||| |
|
|
| T |
14860 |
gatctaatggttattattaagtcctctcatctctcataataa |
14819 |
T |
 |
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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:
Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 150424 - 150368
Alignment:
| Q |
238 |
aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaa |
294 |
Q |
| |
|
|||| |||||||||||| || |||||| |||| |||||||||||||||||||||| |
|
|
| T |
150424 |
aaccgttaagattgatcgaagggttatggtttaaccctctcatctctcacaataaaa |
150368 |
T |
 |
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