View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19191_high_6 (Length: 238)
Name: NF19191_high_6
Description: NF19191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19191_high_6 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 10689992 - 10690213
Alignment:
| Q |
18 |
ccttgcaatttgtgtgtttcggggttgggttgggttatgtcgtttgttgtaattttatactaagcagacaccggatacaacactgacgcgtcgagattaa |
117 |
Q |
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| T |
10689992 |
ccttgcaatttgtgtgtttcggggttgggttgggttatgtcgtttgttgtaattttatatgaagcagacactgtatacgacactgacatgttgagattgg |
10690091 |
T |
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| Q |
118 |
taaggattttagaaaacgatataattgaatgtaatcacttgtctggaaactgatacgtgtctgaacacaccttccaagtgtcgat-tttatgttacagaa |
216 |
Q |
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| T |
10690092 |
taatgattttagaaaacgatataattaaatgtaatcacttatctggaaactgatacgtgtccgaacacaccttctaagtgtcgatgtttatgttatagag |
10690191 |
T |
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| Q |
217 |
gtatgaagcacatacattcctc |
238 |
Q |
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| T |
10690192 |
gtatgaagcacatacattcctc |
10690213 |
T |
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