View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19191_low_1 (Length: 668)

Name: NF19191_low_1
Description: NF19191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19191_low_1
NF19191_low_1
[»] chr1 (77 HSPs)
chr1 (297-469)||(24651474-24651646)
chr1 (502-650)||(24651278-24651429)
chr1 (76-254)||(24651643-24651838)
chr1 (1-81)||(24655575-24655655)
chr1 (1-67)||(51692187-51692253)
chr1 (1-70)||(42607522-42607591)
chr1 (1-52)||(11394710-11394761)
chr1 (1-72)||(14776052-14776123)
chr1 (5-67)||(16267718-16267780)
chr1 (1-67)||(23281327-23281393)
chr1 (1-67)||(33753228-33753294)
chr1 (1-67)||(34279558-34279624)
chr1 (1-67)||(51691877-51691943)
chr1 (1-70)||(44222192-44222261)
chr1 (5-70)||(50574838-50574903)
chr1 (1-69)||(49291300-49291368)
chr1 (1-73)||(50118344-50118416)
chr1 (4-67)||(34279243-34279306)
chr1 (1-67)||(5117996-5118062)
chr1 (1-67)||(9881555-9881621)
chr1 (5-67)||(16268010-16268072)
chr1 (1-67)||(18793694-18793760)
chr1 (1-67)||(35986235-35986301)
chr1 (1-67)||(45305726-45305792)
chr1 (1-47)||(46949779-46949825)
chr1 (5-70)||(13944511-13944576)
chr1 (1-70)||(30293329-30293398)
chr1 (1-42)||(33753533-33753574)
chr1 (5-82)||(37198920-37198997)
chr1 (1-70)||(37199238-37199307)
chr1 (4-48)||(4045121-4045165)
chr1 (1-69)||(10654346-10654414)
chr1 (1-53)||(22584669-22584721)
chr1 (4-67)||(36077274-36077337)
chr1 (1-84)||(50921408-50921491)
chr1 (5-67)||(4550921-4550983)
chr1 (1-67)||(10923680-10923746)
chr1 (1-67)||(11788057-11788123)
chr1 (1-67)||(14118533-14118599)
chr1 (1-67)||(25088019-25088085)
chr1 (1-67)||(28970422-28970488)
chr1 (4-70)||(29256832-29256898)
chr1 (1-47)||(32564266-32564312)
chr1 (1-67)||(34029038-34029104)
chr1 (1-67)||(50921063-50921129)
chr1 (1-70)||(6181616-6181685)
chr1 (1-67)||(18794008-18794076)
chr1 (1-70)||(19885982-19886051)
chr1 (1-70)||(30293013-30293082)
chr1 (1-70)||(30611220-30611289)
chr1 (1-42)||(32517633-32517674)
chr1 (1-66)||(51810141-51810206)
chr1 (4-53)||(52412615-52412664)
chr1 (1-73)||(1831981-1832053)
chr1 (4-67)||(10654033-10654095)
chr1 (5-48)||(11787762-11787805)
chr1 (4-67)||(11797149-11797212)
chr1 (1-52)||(22584369-22584420)
chr1 (1-48)||(24590248-24590295)
chr1 (4-67)||(28112724-28112787)
chr1 (4-67)||(34028724-34028787)
chr1 (1-67)||(1831667-1831733)
chr1 (1-67)||(4045416-4045482)
chr1 (1-47)||(5463140-5463186)
chr1 (5-67)||(11394981-11395043)
chr1 (1-67)||(13944828-13944894)
chr1 (1-71)||(19886231-19886301)
chr1 (1-67)||(24655903-24655969)
chr1 (1-47)||(36884745-36884791)
chr1 (5-47)||(49291016-49291058)
chr1 (7-56)||(12501761-12501810)
chr1 (6-67)||(20260701-20260762)
chr1 (1-70)||(25088333-25088401)
chr1 (1-66)||(36657818-36657883)
chr1 (1-42)||(46739041-46739082)
chr1 (5-53)||(10923379-10923427)
chr1 (5-53)||(20260445-20260493)
[»] chr2 (67 HSPs)
chr2 (1-67)||(27476684-27476750)
chr2 (1-71)||(4121080-4121150)
chr2 (1-67)||(28202863-28202929)
chr2 (1-67)||(4104162-4104228)
chr2 (1-67)||(16736104-16736170)
chr2 (1-74)||(36211716-36211789)
chr2 (5-70)||(43183904-43183969)
chr2 (1-67)||(12303788-12303854)
chr2 (1-67)||(13354180-13354246)
chr2 (1-67)||(17856202-17856268)
chr2 (1-67)||(18565069-18565135)
chr2 (1-67)||(18565320-18565386)
chr2 (1-67)||(20297413-20297479)
chr2 (1-67)||(28203177-28203243)
chr2 (1-67)||(32933908-32933974)
chr2 (4-66)||(34127570-34127632)
chr2 (5-70)||(27132511-27132576)
chr2 (5-70)||(44610862-44610926)
chr2 (1-72)||(4104476-4104547)
chr2 (4-67)||(39912630-39912693)
chr2 (1-48)||(41377376-41377423)
chr2 (1-67)||(4120767-4120833)
chr2 (1-67)||(16260874-16260940)
chr2 (1-71)||(16655605-16655675)
chr2 (5-67)||(17856510-17856572)
chr2 (1-67)||(27132827-27132893)
chr2 (1-67)||(27883471-27883537)
chr2 (1-67)||(31450669-31450735)
chr2 (1-67)||(31450983-31451049)
chr2 (1-67)||(37412596-37412662)
chr2 (1-67)||(39454454-39454520)
chr2 (5-67)||(45389134-45389196)
chr2 (5-70)||(16655927-16655992)
chr2 (1-66)||(28631278-28631343)
chr2 (5-70)||(34484235-34484300)
chr2 (1-70)||(37744705-37744774)
chr2 (1-53)||(13354494-13354546)
chr2 (1-53)||(40694212-40694264)
chr2 (5-68)||(16350079-16350142)
chr2 (1-84)||(20908497-20908580)
chr2 (5-48)||(25642589-25642632)
chr2 (5-48)||(43183605-43183648)
chr2 (1-63)||(12304102-12304164)
chr2 (1-67)||(12304471-12304537)
chr2 (1-67)||(14877486-14877552)
chr2 (5-67)||(16261191-16261253)
chr2 (1-67)||(20908828-20908894)
chr2 (1-67)||(21470298-21470364)
chr2 (4-70)||(32933591-32933657)
chr2 (5-75)||(34820274-34820344)
chr2 (5-67)||(36211353-36211415)
chr2 (4-74)||(37412898-37412968)
chr2 (5-67)||(37744452-37744514)
chr2 (1-67)||(38275774-38275840)
chr2 (1-67)||(39150142-39150208)
chr2 (5-67)||(41377675-41377737)
chr2 (5-70)||(5720142-5720207)
chr2 (4-53)||(15829737-15829786)
chr2 (1-42)||(27476394-27476435)
chr2 (5-42)||(27883778-27883815)
chr2 (1-70)||(28631591-28631660)
chr2 (5-70)||(33819397-33819462)
chr2 (5-70)||(34820600-34820665)
chr2 (5-70)||(44915740-44915805)
chr2 (1-65)||(10833352-10833416)
chr2 (1-53)||(34484363-34484415)
chr2 (7-47)||(40537022-40537062)
[»] chr5 (52 HSPs)
chr5 (1-67)||(32272157-32272223)
chr5 (5-68)||(5624381-5624444)
chr5 (1-67)||(7399080-7399146)
chr5 (1-67)||(21750813-21750879)
chr5 (1-67)||(40589371-40589437)
chr5 (1-67)||(40589974-40590040)
chr5 (1-65)||(7210461-7210525)
chr5 (1-53)||(28392087-28392139)
chr5 (1-80)||(19205260-19205339)
chr5 (1-67)||(7210762-7210828)
chr5 (1-67)||(8418501-8418567)
chr5 (1-67)||(29023940-29024006)
chr5 (1-67)||(35263497-35263563)
chr5 (5-75)||(42710671-42710741)
chr5 (1-70)||(14051889-14051958)
chr5 (5-70)||(15476580-15476644)
chr5 (5-70)||(31909251-31909316)
chr5 (1-66)||(39706368-39706433)
chr5 (1-65)||(8418206-8418270)
chr5 (1-53)||(31656375-31656427)
chr5 (4-51)||(38416162-38416209)
chr5 (4-84)||(41859997-41860079)
chr5 (1-67)||(5088445-5088511)
chr5 (1-67)||(9693235-9693301)
chr5 (5-75)||(15476261-15476331)
chr5 (5-67)||(19204947-19205009)
chr5 (1-67)||(38416451-38416517)
chr5 (1-42)||(9692946-9692987)
chr5 (5-70)||(15267242-15267306)
chr5 (1-53)||(17736564-17736616)
chr5 (1-69)||(25923119-25923187)
chr5 (3-67)||(33699278-33699342)
chr5 (5-53)||(41372479-41372527)
chr5 (5-48)||(7399399-7399442)
chr5 (1-64)||(26289337-26289400)
chr5 (1-67)||(3878484-3878550)
chr5 (4-66)||(5087811-5087873)
chr5 (1-67)||(5460191-5460257)
chr5 (5-67)||(10656097-10656159)
chr5 (1-47)||(15267557-15267603)
chr5 (1-67)||(16353471-16353537)
chr5 (1-47)||(17861062-17861108)
chr5 (1-67)||(33763225-33763290)
chr5 (1-67)||(35263811-35263877)
chr5 (5-47)||(36751925-36751967)
chr5 (5-66)||(12695007-12695068)
chr5 (5-70)||(15670472-15670537)
chr5 (5-42)||(16353182-16353219)
chr5 (1-53)||(146538-146590)
chr5 (10-70)||(5460272-5460332)
chr5 (5-53)||(26289037-26289085)
chr5 (1-48)||(33762924-33762972)
[»] chr4 (55 HSPs)
chr4 (1-71)||(25218083-25218153)
chr4 (5-84)||(15985452-15985531)
chr4 (1-67)||(21217850-21217916)
chr4 (1-67)||(46200487-46200553)
chr4 (1-67)||(54136094-54136160)
chr4 (1-70)||(24504257-24504326)
chr4 (5-70)||(25058833-25058898)
chr4 (1-66)||(33625868-33625933)
chr4 (1-66)||(46620931-46620996)
chr4 (1-70)||(46621244-46621313)
chr4 (1-69)||(1205379-1205447)
chr4 (4-67)||(46200805-46200868)
chr4 (5-71)||(1157202-1157268)
chr4 (1-67)||(9010508-9010574)
chr4 (1-67)||(21218164-21218230)
chr4 (1-67)||(29864492-29864558)
chr4 (1-67)||(52914955-52915021)
chr4 (5-66)||(33882270-33882331)
chr4 (1-70)||(34959148-34959217)
chr4 (1-66)||(44710720-44710785)
chr4 (1-69)||(8247063-8247131)
chr4 (1-65)||(27347914-27347978)
chr4 (1-72)||(1157523-1157594)
chr4 (1-48)||(25218401-25218448)
chr4 (1-48)||(29864198-29864245)
chr4 (1-48)||(37515770-37515817)
chr4 (1-71)||(2738879-2738949)
chr4 (1-67)||(18862758-18862824)
chr4 (1-67)||(33626181-33626247)
chr4 (5-67)||(34958835-34958897)
chr4 (5-67)||(43317200-43317262)
chr4 (1-67)||(46535526-46535592)
chr4 (1-67)||(54191901-54191967)
chr4 (1-42)||(4793916-4793957)
chr4 (6-67)||(10014468-10014529)
chr4 (6-67)||(10021609-10021670)
chr4 (5-70)||(45911579-45911644)
chr4 (1-73)||(1205694-1205766)
chr4 (1-53)||(9010822-9010874)
chr4 (5-48)||(8246790-8246833)
chr4 (5-48)||(10014784-10014827)
chr4 (5-48)||(10021925-10021968)
chr4 (1-48)||(25593408-25593455)
chr4 (5-68)||(29970195-29970258)
chr4 (1-48)||(40067370-40067417)
chr4 (1-47)||(4965894-4965940)
chr4 (1-67)||(8751290-8751356)
chr4 (5-67)||(9657670-9657732)
chr4 (1-67)||(11242781-11242847)
chr4 (1-67)||(32384656-32384722)
chr4 (1-67)||(45911891-45911957)
chr4 (5-67)||(48209951-48210013)
chr4 (5-70)||(22831119-22831184)
chr4 (3-48)||(53645473-53645518)
chr4 (4-48)||(40067668-40067712)
[»] scaffold0045 (4 HSPs)
scaffold0045 (1-74)||(65735-65808)
scaffold0045 (1-74)||(73067-73140)
scaffold0045 (4-67)||(66059-66122)
scaffold0045 (4-67)||(73391-73454)
[»] chr6 (25 HSPs)
chr6 (1-70)||(24604875-24604944)
chr6 (1-53)||(13155856-13155908)
chr6 (1-53)||(13160712-13160764)
chr6 (1-67)||(3338480-3338546)
chr6 (1-67)||(19135763-19135829)
chr6 (4-70)||(31029524-31029590)
chr6 (1-75)||(33544817-33544891)
chr6 (1-53)||(24605190-24605242)
chr6 (1-67)||(3288933-3288999)
chr6 (5-67)||(3289231-3289293)
chr6 (1-75)||(25551653-25551727)
chr6 (1-67)||(33329209-33329275)
chr6 (1-47)||(33346501-33346547)
chr6 (1-47)||(35119128-35119174)
chr6 (4-53)||(11524782-11524831)
chr6 (2-67)||(29009957-29010022)
chr6 (5-70)||(33971928-33971993)
chr6 (1-73)||(1860803-1860874)
chr6 (1-53)||(3338792-3338844)
chr6 (4-47)||(11524728-11524771)
chr6 (4-67)||(11525085-11525148)
chr6 (1-47)||(1158611-1158657)
chr6 (1-67)||(9173904-9173970)
chr6 (1-67)||(14336905-14336971)
chr6 (5-67)||(35132604-35132666)
[»] chr8 (40 HSPs)
chr8 (1-53)||(29027285-29027337)
chr8 (1-76)||(40040156-40040231)
chr8 (1-67)||(3869266-3869332)
chr8 (1-67)||(16645865-16645931)
chr8 (1-67)||(24456737-24456803)
chr8 (4-70)||(37393477-37393543)
chr8 (1-67)||(39240033-39240099)
chr8 (5-71)||(39240340-39240406)
chr8 (5-70)||(8654257-8654322)
chr8 (1-67)||(1826108-1826174)
chr8 (1-67)||(1860553-1860619)
chr8 (1-67)||(24456969-24457035)
chr8 (5-71)||(26736124-26736190)
chr8 (1-67)||(30872786-30872852)
chr8 (1-67)||(35224084-35224150)
chr8 (1-67)||(37393794-37393860)
chr8 (5-70)||(758344-758409)
chr8 (4-67)||(8653939-8654002)
chr8 (4-67)||(18017793-18017856)
chr8 (4-67)||(18622067-18622130)
chr8 (1-67)||(44678320-44678386)
chr8 (1-42)||(7041657-7041698)
chr8 (1-70)||(23244832-23244901)
chr8 (1-42)||(29027000-29027041)
chr8 (5-70)||(39912240-39912305)
chr8 (5-65)||(14920732-14920792)
chr8 (1-49)||(36343982-36344030)
chr8 (4-48)||(40094497-40094541)
chr8 (1-52)||(21515517-21515568)
chr8 (4-67)||(31230933-31230996)
chr8 (1-67)||(119120-119186)
chr8 (1-67)||(5416815-5416881)
chr8 (5-67)||(5417134-5417196)
chr8 (1-67)||(6844757-6844823)
chr8 (5-67)||(11198526-11198588)
chr8 (1-67)||(35223777-35223843)
chr8 (5-70)||(6843495-6843560)
chr8 (6-67)||(12873368-12873429)
chr8 (1-65)||(14920416-14920480)
chr8 (5-53)||(31230630-31230678)
[»] chr3 (59 HSPs)
chr3 (5-68)||(21169668-21169731)
chr3 (1-68)||(34521574-34521641)
chr3 (1-67)||(12123093-12123159)
chr3 (1-67)||(34521269-34521335)
chr3 (1-67)||(43899114-43899180)
chr3 (1-67)||(44069126-44069192)
chr3 (1-67)||(45871700-45871766)
chr3 (1-67)||(54107672-54107738)
chr3 (5-70)||(35580270-35580335)
chr3 (5-70)||(40410712-40410777)
chr3 (1-53)||(45872006-45872058)
chr3 (1-67)||(4846913-4846979)
chr3 (1-67)||(7937646-7937712)
chr3 (1-67)||(15862185-15862251)
chr3 (1-67)||(17102387-17102453)
chr3 (1-67)||(26332640-26332705)
chr3 (5-67)||(41997822-41997884)
chr3 (1-67)||(43899391-43899457)
chr3 (1-67)||(50819534-50819600)
chr3 (1-67)||(50856264-50856330)
chr3 (1-67)||(52609679-52609745)
chr3 (1-67)||(54108437-54108503)
chr3 (5-70)||(12123400-12123465)
chr3 (5-70)||(14353046-14353111)
chr3 (1-70)||(34629982-34630051)
chr3 (5-70)||(41208401-41208466)
chr3 (5-48)||(19124493-19124536)
chr3 (5-67)||(7274656-7274718)
chr3 (1-67)||(8846079-8846145)
chr3 (1-67)||(19124192-19124258)
chr3 (5-67)||(33812864-33812926)
chr3 (1-47)||(38911535-38911581)
chr3 (5-67)||(41208721-41208783)
chr3 (1-67)||(45171384-45171450)
chr3 (5-67)||(52606132-52606193)
chr3 (1-75)||(54081279-54081352)
chr3 (1-67)||(54081601-54081667)
chr3 (1-66)||(7274959-7275024)
chr3 (5-70)||(46766622-46766687)
chr3 (1-65)||(35753408-35753472)
chr3 (5-80)||(2078793-2078868)
chr3 (2-73)||(7937881-7937952)
chr3 (4-47)||(10757028-10757071)
chr3 (8-67)||(26332322-26332381)
chr3 (5-48)||(28688311-28688354)
chr3 (4-67)||(31514182-31514245)
chr3 (4-67)||(52268423-52268486)
chr3 (1-67)||(7950278-7950344)
chr3 (1-67)||(10756721-10756787)
chr3 (1-67)||(14353364-14353430)
chr3 (5-67)||(41998135-41998197)
chr3 (1-67)||(44069440-44069506)
chr3 (1-67)||(51170698-51170764)
chr3 (5-70)||(40926011-40926076)
chr3 (8-53)||(49222349-49222394)
chr3 (5-53)||(7743086-7743134)
chr3 (1-69)||(17273778-17273846)
chr3 (1-53)||(45171085-45171137)
chr3 (5-53)||(51885685-51885733)
[»] scaffold0809 (2 HSPs)
scaffold0809 (1-67)||(4635-4701)
scaffold0809 (5-70)||(4338-4403)
[»] scaffold0168 (2 HSPs)
scaffold0168 (1-80)||(11804-11883)
scaffold0168 (1-67)||(11491-11557)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-71)||(13858-13928)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-67)||(40669-40735)
[»] chr7 (32 HSPs)
chr7 (1-67)||(23472873-23472939)
chr7 (5-67)||(31715942-31716004)
chr7 (1-67)||(35085742-35085808)
chr7 (5-70)||(8769282-8769347)
chr7 (5-70)||(37144084-37144149)
chr7 (1-70)||(39118010-39118079)
chr7 (4-64)||(21522226-21522286)
chr7 (1-72)||(18731017-18731088)
chr7 (1-48)||(23437174-23437221)
chr7 (5-67)||(8769603-8769665)
chr7 (1-67)||(10625109-10625175)
chr7 (1-67)||(10625401-10625467)
chr7 (1-67)||(11678706-11678772)
chr7 (1-67)||(11679019-11679085)
chr7 (1-67)||(23472596-23472662)
chr7 (1-67)||(32706735-32706801)
chr7 (1-47)||(34568606-34568652)
chr7 (5-75)||(43140693-43140763)
chr7 (1-67)||(47250863-47250929)
chr7 (4-53)||(48704128-48704177)
chr7 (4-48)||(47250579-47250623)
chr7 (1-52)||(31715651-31715702)
chr7 (1-48)||(41758701-41758748)
chr7 (1-67)||(473195-473261)
chr7 (5-67)||(35086061-35086123)
chr7 (4-53)||(2357375-2357424)
chr7 (5-70)||(21522537-21522602)
chr7 (5-70)||(43726244-43726309)
chr7 (4-40)||(5238481-5238517)
chr7 (9-41)||(9231002-9231034)
chr7 (5-53)||(36507130-36507178)
chr7 (5-53)||(37143781-37143829)
[»] scaffold0236 (2 HSPs)
scaffold0236 (4-48)||(11534-11578)
scaffold0236 (1-53)||(11230-11282)
[»] scaffold0128 (1 HSPs)
scaffold0128 (7-67)||(45159-45219)


Alignment Details
Target: chr1 (Bit Score: 137; Significance: 3e-71; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 297 - 469
Target Start/End: Complemental strand, 24651646 - 24651474
Alignment:
Q  297 tttattttatcaaattattagattgtaataatatttatgtgtccgtatcaacatcatacgtgttcaatgttcatccttgtgttttgtagtcatagataga 396  Q
    ||||||||||||||||||||| |||||||||| |||| ||||| ||||||||||||||| |||||||| |||||| |||||||||||||||||||||| |    
T  24651646 tttattttatcaaattattagtttgtaataatgtttacgtgtcggtatcaacatcatacatgttcaatattcatctttgtgttttgtagtcatagataaa 24651547  T
Q  397 caagtacgttttgtattatgattaatagaaacaaatcattctacatcaaaaacatgtatattccctttgcccc 469  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  24651546 caagtacgttttgtattatgattaatagaaacaaatcattctaaatcaaaaacatgtatattccctttgcccc 24651474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 502 - 650
Target Start/End: Complemental strand, 24651429 - 24651278
Alignment:
Q  502 ttgaaaggacacaatattacatgatcatataacaatttgatcacagtttatttttt--aaatattttaacatttgcttaatttagaaaataaattcttcc 599  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  24651429 ttgaaaggacacaatattacatgatcatataacaatttgatcacagtttattttttttaaatattttaacatttgcttaatttagaaaataaattcttcc 24651330  T
Q  600 ctcccccttctcg-aaacccccctcccaaaaagacagatgtgcttagactca 650  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  24651329 ctcccccttctcgaaaacccccctcccaaaaagacagatgtgcttagactca 24651278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 76 - 254
Target Start/End: Complemental strand, 24651838 - 24651643
Alignment:
Q  76 cttatttttaataaaatcaccaacataatgtataggataatag-----------------aaaagctgagattggtatttgtcaaaaaatagaagttgag 158  Q
    |||||||||||||||||||||||||||||||||||||||||||                 |||||||||| |||||||||||||||||||||||||||||    
T  24651838 cttatttttaataaaatcaccaacataatgtataggataatagccaatgaagcagctgttaaaagctgagcttggtatttgtcaaaaaatagaagttgag 24651739  T
Q  159 attagtaccgcagcaaaatatcannnnnnnnncttcttctcatgtattagtaatgaaactctt-atccttaacatgaacatctaacccaacaattta 254  Q
    |||||||||||||||||||||||         ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  24651738 attagtaccgcagcaaaatatca-ttttttttcttcttctcatgtattagtaatgaaactcttgatccttaacatgaacatctagcccaacaattta 24651643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 24655655 - 24655575
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttcttatt 81  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  24655655 atcgaattttaattaagagaccaaagcgatactacctaaatacttaagggaccaaatatgcaatttaaccattttcttatt 24655575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 51692187 - 51692253
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| |||| || ||||||||||    
T  51692187 atcgaattttaattaatggaccaaaacgatattacctaaatagttaagggaccaaaaatgcaattta 51692253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 42607591 - 42607522
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||| |||||||||||||||||||||||| ||||||| ||||| |||| || |||||||||||||    
T  42607591 atcgaatttaaattaagggaccaaaacgatattatctaaatagttaagggaccaaaaatgcaatttaacc 42607522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11394761 - 11394710
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagac 52  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  11394761 atcgaattttaattaagggaccaaagcgatattacctaaatagttaagagac 11394710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14776052 - 14776123
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccat 72  Q
    |||||||||||||||||||| |||||||||| |||||||||| ||||| |||| || |||||||||| ||||    
T  14776052 atcgaattttaattaagggaacaaaacgatactacctaaatagttaagtgaccaaaaatgcaatttagccat 14776123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 16267780 - 16267718
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| |||||||||||||||| ||||| |||| || ||||||||||    
T  16267780 aattttaattaagggaccaaagcgatattacctaaatagttaagggaccaaaaatgcaattta 16267718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23281327 - 23281393
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  23281327 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 23281393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33753294 - 33753228
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  33753294 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 33753228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34279558 - 34279624
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||| |||| || ||||||||||    
T  34279558 atcgaattttaattaagggaccaaaatgatactacctaaatagttaagggaccaaaaatgcaattta 34279624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 51691943 - 51691877
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  51691943 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 51691877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 44222261 - 44222192
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||||||| ||||||||| |||||| ||||  |||| || |||||||||||||    
T  44222261 atcgaattttaattaagggaccaaagcgatattacataaataattaaaggaccaaaaatgcaatttaacc 44222192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 50574838 - 50574903
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||| || ||||||| |||||    
T  50574838 aattttaattaagggaccaaaacgatactacctaaatagttaagggaccaaaaatgcaatctaacc 50574903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 49291300 - 49291368
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaac 69  Q
    ||||||||||||||||||||||||||||||| || ||||||| ||||| |||  || ||||||||||||    
T  49291300 atcgaattttaattaagggaccaaaacgatactatctaaatagttaagggacgaaaaatgcaatttaac 49291368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50118416 - 50118344
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatt 73  Q
    |||||||| |||||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||||||||    
T  50118416 atcgaattgtaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaatttaaccatt 50118344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 34279306 - 34279243
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||| || || |||||||||| |||||||||| || ||||||||||    
T  34279306 gaattttaattaagggaccaaagcgttactacctaaatagttaagagaccaaaaatgcaattta 34279243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5118062 - 5117996
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||| |||| || || |||||||    
T  5118062 atcgaattttaattaaaggaccaaagcgatattacctaaatagttaagggaccaaaaatacaattta 5117996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9881621 - 9881555
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||| |||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  9881621 atcgaattttaatttagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 9881555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 16268010 - 16268072
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  16268010 aattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 16268072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18793760 - 18793694
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||| ||||||    
T  18793760 atcgaattttaattaagggaccaaagcgatactacctaaataattaagggaccaaaaatgaaattta 18793694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35986301 - 35986235
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| || | || ||||||||||    
T  35986301 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaacaaaaatgcaattta 35986235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45305726 - 45305792
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  45305726 atcgaattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 45305792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 46949825 - 46949779
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||    
T  46949825 atcgaattttaattaagggaccaaaacgatactacctaaatagttaa 46949779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 13944576 - 13944511
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||||||||| || ||||||| ||||  |||| || |||||||||||||    
T  13944576 aattttaattaagggaccaaaacgatactagctaaatagttaaaggaccaaaaatgcaatttaacc 13944511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 30293329 - 30293398
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||| ||| |||| ||||| |||||||||| ||||| |||| || |||||||||||||    
T  30293329 atcgaattttaattaaaggatcaaagcgatactacctaaatagttaagggaccaaaaatgcaatttaacc 30293398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 33753533 - 33753574
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaata 42  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  33753533 atcgaattttaattaagggaccaaaacgatactacctaaata 33753574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 37198997 - 37198920
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttcttattt 82  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||| ||| || || ||||||| || |||| ||||||    
T  37198997 aattttaattaagggaccaaagcgatattgcctaaatagttaagaaaccaaaaatacaatttagccttttttttattt 37198920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37199238 - 37199307
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||||||||||  |||| |||||||||| |||||  ||| || |||||||||||||    
T  37199238 atcgaattttaattaagggaccaaagtgatactacctaaatagttaaggaaccaaaaatgcaatttaacc 37199307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 4045165 - 4045121
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||||||||||||||||| |||||||||| |||||    
T  4045165 gaattttaattaagggaccaaaacgatactacctaaatagttaag 4045121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10654346 - 10654414
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaac 69  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || |||||| |||||    
T  10654346 atcgaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaaattaac 10654414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22584669 - 22584721
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||| ||||    
T  22584669 atcgaattttaattaagggaccaaaacgatactacctaattagttaagggacc 22584721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 36077337 - 36077274
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  36077337 gaattttaattaagggaccaaagtgatactacctaaataattaagggaccaaaaatgcaattta 36077274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 50921408 - 50921491
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttcttattttt 84  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || ||| |||||| || |||| || |||||    
T  50921408 atcgaattttacttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgtaatttagcctttttttttttttt 50921491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 4550921 - 4550983
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||||| ||  |||||| |||||||||| || ||||||||||    
T  4550921 aattttaattaagggaccaaagcgatactaattaaatagttaagagaccaaaaatgcaattta 4550983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10923680 - 10923746
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| |||||  || |||||| ||||| |||| || ||||||||||    
T  10923680 atcgaattttaattaagggaccaaagcgataccacttaaatagttaagggaccaaaaatgcaattta 10923746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11788057 - 11788123
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| | | |||||| |||| ||||| || ||||||||||    
T  11788057 atcgaattttaattaagggaccaaagcgatactgcttaaataattaaaagaccaaaaatgcaattta 11788123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14118599 - 14118533
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||| ||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  14118599 atcgaattttaattaaggaaccaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 14118533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25088085 - 25088019
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| |||| |||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  25088085 atcgaattttagttaaaggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 25088019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28970488 - 28970422
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||  |||| || ||||||||||    
T  28970488 atcgaattttaattaaaggaccaaagcgatactacctaaatagttaaaggaccaaaaatgcaattta 28970422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 29256898 - 29256832
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||  |||||||||    
T  29256898 gaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatataatttaacc 29256832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32564266 - 32564312
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  32564266 atcgaattttaattaagggaccaaagcgatactacctaaatagttaa 32564312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 34029038 - 34029104
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| |||||||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  34029038 atcgaattttagttaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 34029104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50921129 - 50921063
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||| ||||||||||||||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  50921129 atcggattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 50921063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 6181685 - 6181616
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||| |||||| ||||| || ||||||| ||||| || | || |||||||||||||    
T  6181685 atcgaattttaattaaggaaccaaagcgatactaactaaataattaagggatcaaaaatgcaatttaacc 6181616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18794008 - 18794076
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatat--tacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||||  ||| |||||| ||||| |||| || ||||||||||    
T  18794008 atcgaattttaattaagggaccaaagcgatatactacttaaatagttaagggaccaaaaatgcaattta 18794076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 19886051 - 19885982
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||| |||||| ||||| |||  ||||| ||||| |||| || |||||||||||||    
T  19886051 atcgaattttaattaaggaaccaaagcgatactacaaaaatagttaagggaccaaaaatgcaatttaacc 19885982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30293082 - 30293013
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||| ||| ||||||| ||||| |||||||||| ||||  |||| || |||||||||||||    
T  30293082 atcgaattttaataaagagaccaaagcgatactacctaaatagttaatggaccaaaaatgcaatttaacc 30293013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 30611289 - 30611220
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||||| ||||  |||| || ||||||| ||||| |||| || |||||||||||||    
T  30611289 atcgaattttaattaagggatcaaagtgataatatctaaatagttaagggaccaaaaatgcaatttaacc 30611220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32517674 - 32517633
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaata 42  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  32517674 atcgaattttaattaagggaccaaagcgatactacctaaata 32517633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 51810206 - 51810141
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    |||||||||||||||| ||||||||  |||| |||||||||| |||||||||  || |||||||||    
T  51810206 atcgaattttaattaaaggaccaaagtgatactacctaaatagttaagagactaaaaatgcaattt 51810141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 52412664 - 52412615
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||| ||||    
T  52412664 gaattttaattaagggaccaaagcgatactacctaaatagttaagggacc 52412615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1831981 - 1832053
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatt 73  Q
    |||||||||||||||| |||| ||||||||| ||| || ||| ||||| |||| || || |||||||||||||    
T  1831981 atcgaattttaattaaaggactaaaacgatactacatatatagttaagggaccaaaaatacaatttaaccatt 1832053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 10654095 - 10654033
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||| || || |||||||||| ||||| |||| || ||||||||||    
T  10654095 gaattttaattaagggaccaaagcg-tactacctaaataattaagggaccaaaaatgcaattta 10654033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 11787805 - 11787762
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||    
T  11787805 aattttaattaagggaccaaagcgatactacctaaatagttaag 11787762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 11797212 - 11797149
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||| ||| ||||| |||||||||| ||||  |||| || ||||||||||    
T  11797212 gaattttaattaagggacaaaagcgatactacctaaataattaaaggaccaaaaatgcaattta 11797149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 22584420 - 22584369
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagac 52  Q
    ||||||||||||||||||||||||   |||| |||||||||| |||||||||    
T  22584420 atcgaattttaattaagggaccaatgtgatactacctaaatagttaagagac 22584369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24590295 - 24590248
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||||| ||||| ||| |||||| |||||    
T  24590295 atcgaattttaattaagggaccaaagcgatactacttaaatagttaag 24590248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 28112787 - 28112724
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||| |||||| | ||| |||||||||| ||||| |||| || ||||||||||    
T  28112787 gaattttaattaaggaaccaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 28112724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 34028787 - 34028724
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||| |||||||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  34028787 gaattttagttaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 34028724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1831733 - 1831667
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||  |||||||  |||| |||||||||| |||||||||| || || |||||||    
T  1831733 atcgaattttaattaaaagaccaaagtgatactacctaaatagttaagagaccgaaaattcaattta 1831667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4045416 - 4045482
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||| |||||||  |||| ||| |||||| ||||| |||| || ||||||||||    
T  4045416 atcgaattttaattaagagaccaaagtgatactacttaaatagttaagggaccaaacatgcaattta 4045482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5463186 - 5463140
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||| ||||||| |||||||| ||||||| ||||    
T  5463186 atcgaattttaattaagagaccaaagcgatattatctaaataattaa 5463140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 11394981 - 11395043
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||| | | |||||||||| ||||| |||| || ||||||||||    
T  11394981 aattttaattaagggatcaaaacaaaactacctaaatagttaagggaccaaaaatgcaattta 11395043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13944828 - 13944894
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||| ||||||||||| |||||||||| |||||||||  ||||| |||| || || |||||||    
T  13944828 atcgaattctaattaagggatcaaaacgatactacctaaatgattaagggaccaaaaatacaattta 13944894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19886231 - 19886301
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    |||||||||||||||| ||||||||  |||| |||||||||| ||||  |||| || || |||||||||||    
T  19886231 atcgaattttaattaaaggaccaaagtgatactacctaaataattaaaggaccaaaaatacaatttaacca 19886301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24655903 - 24655969
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||| | ||||||| ||||| ||| |||||| |||||||||  || ||||||||||    
T  24655903 atcgaattttaattacgagaccaaagcgatactacttaaatagttaagagactaaaaatgcaattta 24655969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36884791 - 36884745
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||| ||||||| ||||| |||||||||| ||||    
T  36884791 atcgaattttaattaagagaccaaagcgatactacctaaatagttaa 36884745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 49291058 - 49291016
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||    
T  49291058 aattttaattaagggaccaaagcgatactacctaaatagttaa 49291016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 12501761 - 12501810
Alignment:
Q  7 ttttaattaagggaccaaaacgatattacctaaatacttaagagacctaa 56  Q
    ||||| ||||||||||||||||||| ||  |||||||||||| |||||||    
T  12501761 ttttagttaagggaccaaaacgatactaattaaatacttaagggacctaa 12501810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 20260701 - 20260762
Alignment:
Q  6 attttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||| ||  |||||| ||||| |||  || ||||||||||    
T  20260701 attttaattaagggaccaaaacgatactaattaaataattaagggactaaaaatgcaattta 20260762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25088333 - 25088401
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||| |||||| |||||||||||| |||||||||| ||||| |||| || ||  |||||||||    
T  25088333 atcgaattttagttaagg-accaaaacgatactacctaaatagttaagggaccaaaaatataatttaacc 25088401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 36657818 - 36657883
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    ||||||||||||||||||||||||| ||||| | | |||||| ||||| |||| || || ||||||    
T  36657818 atcgaattttaattaagggaccaaagcgatactgcataaatagttaagggaccaaaaatacaattt 36657883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 46739041 - 46739082
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaata 42  Q
    |||||||||||||||||||||||||  |||| ||||||||||    
T  46739041 atcgaattttaattaagggaccaaagtgatactacctaaata 46739082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 10923427 - 10923379
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||| ||||||||||||| ||||| |||||||||| ||||| ||||    
T  10923427 aattttacttaagggaccaaagcgatactacctaaataattaagggacc 10923379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 20260493 - 20260445
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||||||| |||| ||  |||||| ||||||||||    
T  20260493 aattttaattaagggaccaaaatgatactaattaaatagttaagagacc 20260445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 7e-20; HSPs: 67)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27476684 - 27476750
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||| || ||||||||||    
T  27476684 atcgaattttaattaagggaccaaaacgatactacctaaatagttaagagaccaaaaatgcaattta 27476750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4121080 - 4121150
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    |||||||||||||||| |||||||||||||| |||||||||| ||||| |||| || ||||||||||||||    
T  4121080 atcgaattttaattaaaggaccaaaacgatactacctaaatagttaagggaccaaaaatgcaatttaacca 4121150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28202929 - 28202863
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||| || ||||||||||    
T  28202929 atcgaattttaattaagggaccaaagcgatattacctaaatagttaagggaccaaaaatgcaattta 28202863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4104228 - 4104162
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  4104228 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 4104162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16736170 - 16736104
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  16736170 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 16736104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 36211716 - 36211789
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattt 74  Q
    ||||||||||||||||||||| ||| ||||| |||||||||| |||||||||| || || ||||||| ||||||    
T  36211716 atcgaattttaattaagggacgaaagcgatactacctaaatagttaagagaccaaaaatacaatttagccattt 36211789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 43183904 - 43183969
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || |||||||||||||    
T  43183904 aattttaattaagggaccaaagcgatactacctaaataattaagggaccaaaaatgcaatttaacc 43183969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12303854 - 12303788
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||| ||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  12303854 atcgaattttaattaagtgaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 12303788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13354246 - 13354180
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  13354246 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccgaaaattcaattta 13354180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17856268 - 17856202
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||| ||||||    
T  17856268 atcgaattttaattaagggaccaaagcgatactacctaaataattaagggaccgaaaatgaaattta 17856202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18565135 - 18565069
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||| ||||| | |||||||| |||||||||| || ||||||||||    
T  18565135 atcgaattttaattaagggactaaagcgatactgcctaaatagttaagagaccaaaaatgcaattta 18565069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18565320 - 18565386
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||| || ||||| |||||||||| ||||| |||| || ||||||||||    
T  18565320 atcgaattttaattaagggacccaagcgatactacctaaatagttaagggaccaaaaatgcaattta 18565386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 20297479 - 20297413
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||||||| ||||| |||| ||||| |||| || ||| ||||||    
T  20297479 atcgaattttaattaagggaccaaaacgatactacctgaatagttaagggaccaaaaatgaaattta 20297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 28203177 - 28203243
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| |||||  ||||||||| ||||| |||| || ||||||||||    
T  28203177 atcgaattttaattaagggaccaaagcgatacgacctaaatagttaagggaccaaaaatgcaattta 28203243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32933908 - 32933974
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| |||| |||||||| |||||||||||||||| ||||| |||| || ||||||||||    
T  32933908 atcgaattttatttaaaggaccaaagcgatattacctaaatagttaagggaccaaaaatgcaattta 32933974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 34127632 - 34127570
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    |||||||||||||||||||||||||||| || ||||||| ||||| |||| || |||||||||    
T  34127632 gaattttaattaagggaccaaaacgatactatctaaatagttaagggaccaaaaatgcaattt 34127570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 27132576 - 27132511
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || ||||||||||    
T  27132576 aattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaatttaacc 27132511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 44610926 - 44610862
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||| |||| || |||||||||||||    
T  44610926 aattttaattaagggac-aaagcgatattacctaaatagttaagggaccaaaaatgcaatttaacc 44610862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 4104476 - 4104547
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccat 72  Q
    |||||||||||||||||||| |||| ||||| |||||||||| ||||| |||| || || ||||||| ||||    
T  4104476 atcgaattttaattaagggatcaaagcgatactacctaaatagttaagggaccaaaaatacaatttagccat 4104547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 39912693 - 39912630
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  39912693 gaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 39912630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41377423 - 41377376
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  41377423 atcgaattttaattaagggaccaaagcgatactacctaaatagttaag 41377376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4120833 - 4120767
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||| |||||||||||||| ||||| |||||||||| ||||| |||  || ||||||||||    
T  4120833 atcgaattttgattaagggaccaaagcgatactacctaaatagttaagggacaaaaaatgcaattta 4120767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 16260940 - 16260874
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || |||| |||||    
T  16260940 atcgaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgctattta 16260874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16655675 - 16655605
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    |||||||||||||||| ||||||||| |||| |||||||||| ||||| |||| || || |||||| ||||    
T  16655675 atcgaattttaattaaaggaccaaaatgatactacctaaatagttaagggaccaaaaatacaatttgacca 16655605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 17856510 - 17856572
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| | ||| |||||||||| ||||| |||| || ||||||||||    
T  17856510 aattttaattaagggaccaaaccaatactacctaaatagttaagggaccaaaaatgcaattta 17856572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27132827 - 27132893
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||| | |||||||||| ||||| |||| || ||||||||||    
T  27132827 atcgaattttaattaaaggaccaaatcgacactacctaaatagttaagggaccaaaaatgcaattta 27132893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27883537 - 27883471
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||||||| |||||| ||||| |||  || ||||||||||    
T  27883537 atcgaattttacttaagggaccaaagcgatattacttaaatagttaagggacaaaaaatgcaattta 27883471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31450735 - 31450669
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| |||| |||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  31450735 atcgaattttagttaaaggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 31450669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 31450983 - 31451049
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| || | || ||||||||||    
T  31450983 atcgaattttagttaagggaccaaatcgatactacctaaatagttaagggatcaaaaatgcaattta 31451049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 37412662 - 37412596
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||| ||||||| ||||| || ||||||| ||||| |||| || ||||||||||    
T  37412662 atcgaattttaattaagagaccaaagcgatactaactaaatagttaagggaccaaaaatgcaattta 37412596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39454520 - 39454454
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||  |||| ||| |||||| ||||| |||| || ||||||||||    
T  39454520 atcgaattttaattaagggaccaaagtgatactacttaaatagttaagggaccaaaaatgcaattta 39454454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 45389196 - 45389134
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| | |||||||||| || || |||| || ||||||||||    
T  45389196 aattttaattaagggaccaaaacgacactacctaaatagttcagggaccaaaaatgcaattta 45389134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 16655927 - 16655992
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||| |||| |||||||||||||| |||||||||| ||||| |||| || || ||||||||||    
T  16655927 aattttagttaaaggaccaaaacgatactacctaaatagttaagggaccaaaaatacaatttaacc 16655992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 28631343 - 28631278
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    ||||||||||||||||||||||||| ||||  |||||||||| ||||| |||| || ||| |||||    
T  28631343 atcgaattttaattaagggaccaaagcgatgctacctaaatagttaagggaccaaaaatgtaattt 28631278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 34484300 - 34484235
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||||||  |||| |||||||||| ||||  |||| || |||||||||||||    
T  34484300 aattttaattaagggaccaaagtgatactacctaaatagttaaaggaccaaaaatgcaatttaacc 34484235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37744705 - 37744774
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||||||| ||||| || ||||||| |||||  | | || |||||||||||||    
T  37744705 atcgaattttaattaagggaccaaagcgatactatctaaatagttaaggaatcaaaaatgcaatttaacc 37744774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13354494 - 13354546
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||||| |||| ||||| |||||||||| ||||| ||||    
T  13354494 atcgaattttaattaagggatcaaagcgatactacctaaatagttaagggacc 13354546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40694264 - 40694212
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||| ||||||||||||| ||||||||| |||||||||| ||||| ||||    
T  40694264 atcgaatgttaattaagggactaaaacgatactacctaaatagttaagggacc 40694212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 16350142 - 16350079
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaa 68  Q
    |||||||||||||||||||| |||||| ||  |||||| | |||||||| || |||||||||||    
T  16350142 aattttaattaagggaccaatacgatactaattaaatagtcaagagaccaaaaatgcaatttaa 16350079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 20908580 - 20908497
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttcttattttt 84  Q
    ||||||||||| |||| |||||||| ||||| |||||||||| ||||| |||| || || ||||||| || |||| || |||||    
T  20908580 atcgaattttagttaaaggaccaaagcgatactacctaaataattaagggaccaaaaatacaatttagcctttttttttttttt 20908497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 25642589 - 25642632
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||    
T  25642589 aattttaattaagggaccaaagcgatactacctaaatagttaag 25642632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 43183648 - 43183605
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||    
T  43183648 aattttaattaagggaccaaagcgatactacctaaatagttaag 43183605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 12304102 - 12304164
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaa 63  Q
    |||||||||||||||| |||| ||| ||||| |||||||||| ||||| |||| || ||||||    
T  12304102 atcgaattttaattaaaggacgaaagcgatactacctaaatagttaagggaccaaaaatgcaa 12304164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12304471 - 12304537
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||||| |||||||||  ||||| |||  || ||||||||||    
T  12304471 atcgaattttaattaaaggaccaaagcgatactacctaaattgttaagggacaaaaaatgcaattta 12304537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14877552 - 14877486
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||  | |||| || ||||||||||    
T  14877552 atcgaattttaattaatggaccaaatcgatactacctaaatagttttgggaccaaaaatgcaattta 14877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 16261191 - 16261253
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  16261191 aattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 16261253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20908828 - 20908894
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||  |||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  20908828 atcgaattttaattagaggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 20908894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21470364 - 21470298
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||  |||| | |||||||| ||||  |||| || ||||||||||    
T  21470364 atcgaattttaattaagggaccaaagtgatactgcctaaatagttaaaggaccaaaaatgcaattta 21470298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 32933657 - 32933591
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||| |||||||| ||||  |||| |||||||||| ||||| |||| || |||||||||||||    
T  32933657 gaattttagttaagggatcaaagtgatactacctaaatagttaagggaccaaaaatgcaatttaacc 32933591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 34820344 - 34820274
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatttt 75  Q
    |||||||||||||| |||||| ||||| ||| |||||| ||||| |||| || ||||||||| ||| ||||    
T  34820344 aattttaattaaggaaccaaagcgatactacttaaatagttaagggaccaaaaatgcaatttgaccttttt 34820274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 36211415 - 36211353
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||| |||  ||||||| | ||||| |||| || ||||||||||    
T  36211415 aattttaattaagggaccaaaacaatacaacctaaacagttaagtgaccaaaaatgcaattta 36211353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 37412898 - 37412968
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattt 74  Q
    |||||||||||||||||||||  ||||| ||| |||||| ||||| | || || |||||||||| ||||||    
T  37412898 gaattttaattaagggaccaatgcgatactacttaaatagttaaggggccaaaaatgcaatttagccattt 37412968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 37744514 - 37744452
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||  |||| |||||||||| ||||| |||| || ||| ||||||    
T  37744514 aattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgtaattta 37744452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38275774 - 38275840
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||| ||||  |||| |||||||||| ||||| |||  || ||||||||||    
T  38275774 atcgaattttaattaagggatcaaagtgatactacctaaatagttaagggacaaaaaatgcaattta 38275840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 39150142 - 39150208
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||| || ||| ||||| |||||||||| ||||  |||| || ||||||||||    
T  39150142 atcgaattttaattaaggtacaaaagcgatactacctaaatagttaaaggaccaaaaatgcaattta 39150208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 41377675 - 41377737
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| |||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  41377675 aattttaattacgggaccaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 41377737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 5720207 - 5720142
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||| | |||||||| ||||||  |||||| ||||| |||| || |||||||||||||    
T  5720207 aattttaattaaagaaccaaaacaatattaattaaatagttaagggaccaaaaatgcaatttaacc 5720142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 15829786 - 15829737
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||  |||| ||||||||||  |||||||||    
T  15829786 gaattttaattaagggaccaaagtgatactacctaaatagctaagagacc 15829737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 27476435 - 27476394
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaata 42  Q
    |||||||||||||||||||| |||| ||||| ||||||||||    
T  27476435 atcgaattttaattaagggaacaaagcgatactacctaaata 27476394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 27883778 - 27883815
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaata 42  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  27883778 aattttaattaagggaccaaagcgatactacctaaata 27883815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 28631591 - 28631660
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||| || |||| ||||| |||| ||||| ||||| |||| || || ||||||||||    
T  28631591 atcgaattttaattaagagagcaaagcgatactacccaaatagttaagggaccaaaaatacaatttaacc 28631660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 33819462 - 33819397
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||| |||||||||| || |||||||||| ||||  |||| ||  ||||||||||||    
T  33819462 aattttaattaagagaccaaaacggtactacctaaatagttaatggaccaaaagtgcaatttaacc 33819397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 34820600 - 34820665
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||| ||||||||||||| ||| | |||||||||| ||||| |||| || || ||||||||||    
T  34820600 aattttagttaagggaccaaagcgagactacctaaatagttaagggaccaaaaatacaatttaacc 34820665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 44915805 - 44915740
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| ||  |||||| ||||| |||  || |||||||||||||    
T  44915805 aattttaattaagggaccaaagcgatactaattaaatagttaagggactaaaaatgcaatttaacc 44915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 10833352 - 10833416
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatt 65  Q
    |||||||||||||| |||||| ||| ||||| ||||||||||  |||| |||| || ||||||||    
T  10833352 atcgaattttaattgagggactaaagcgatactacctaaatagctaagggaccaaaaatgcaatt 10833416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34484363 - 34484415
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||  |||||| ||||| |||||||||| ||||| ||||    
T  34484363 atcgaattttaattaagataccaaagcgatactacctaaataattaagggacc 34484415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 40537062 - 40537022
Alignment:
Q  7 ttttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||| |||||||||||||||||||| | ||||||||||||    
T  40537062 ttttagttaagggaccaaaacgatatcaactaaatacttaa 40537022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 32272157 - 32272223
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| |||||||| ||||||| |||||||||| || ||||||||||    
T  32272157 atcgaattttaattaagggaccaaagcgatattatctaaatagttaagagaccaaaaatgcaattta 32272223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 5624444 - 5624381
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaa 68  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| || || ||||||||    
T  5624444 aattttaattaagggaccaaaacgatactacctaaatagttaagagaccaaaaatacaatttaa 5624381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7399146 - 7399080
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  7399146 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 7399080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21750879 - 21750813
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| |||| || | ||||||||    
T  21750879 atcgaattttaattaagggaccaaaacgatactacctaaatagttaagggaccaaaaaggcaattta 21750813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40589371 - 40589437
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||  ||| || ||||||||||    
T  40589371 atcgaattttaattaagggaccaaaacgatactacctaaatagttaaggaaccaaaaatgcaattta 40589437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40589974 - 40590040
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||  ||| || ||||||||||    
T  40589974 atcgaattttaattaagggaccaaaacgatactacctaaatagttaaggaaccaaaaatgcaattta 40590040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 7210525 - 7210461
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatt 65  Q
    ||||||||||||| ||||||||||||||||| |||||||||| ||||| |||| || ||||||||    
T  7210525 atcgaattttaatcaagggaccaaaacgatagtacctaaatatttaagggaccaaaaatgcaatt 7210461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28392087 - 28392139
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||    
T  28392087 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagagacc 28392139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 19205260 - 19205339
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttcttat 80  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| || | || ||||||||||||| || ||||||    
T  19205260 atcgaattttagttaagggaccaaagcgatactacctaaatagttaagggatcaaaaatgcaatttaacctttatcttat 19205339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 7210762 - 7210828
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| |  ||||||||||    
T  7210762 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagtgaccaagaatgcaattta 7210828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8418501 - 8418567
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  8418501 atcgaattttaattaacggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 8418567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 29024006 - 29023940
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||| |||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  29024006 atcgaattttaattaaggaaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 29023940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35263563 - 35263497
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  35263563 atcgaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 35263497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Original strand, 42710671 - 42710741
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatttt 75  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || ||||||| |||||||    
T  42710671 aattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaatttagccatttt 42710741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14051958 - 14051889
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||   |||||||| |||||||||||||| |||||||||| || || ||||||||||    
T  14051958 atcgaattttaattaaaaaaccaaaacaatattacctaaatagttaagagaccaaaaatacaatttaacc 14051889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 15476580 - 15476644
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| || |||| |||||||||||||    
T  15476580 aattttaattaagggaccaaagcgatactacctaaataattaaggga-ctaaaatgcaatttaacc 15476644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 31909251 - 31909316
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||| ||||||||| |||||||| | ||||| |||| || |||||||||||||    
T  31909251 aattttaattaagggacgaaaacgatactacctaaacagttaagggaccaaaaatgcaatttaacc 31909316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 39706368 - 39706433
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    ||||||||||||||||||||||||||  ||| |||||||||| ||||| |||| || |||||||||    
T  39706368 atcgaattttaattaagggaccaaaagaatactacctaaatagttaagggaccaaaaatgcaattt 39706433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8418270 - 8418206
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatt 65  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||||  |||| || ||||||||    
T  8418270 atcgaattttaattaagtgaccaaaacgatactacctaaataattaatggaccaaaaatgcaatt 8418206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 31656427 - 31656375
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||    
T  31656427 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggacc 31656375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 38416209 - 38416162
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagaga 51  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||||    
T  38416209 gaattttaattaagggaccaaagcgatactacctaaataattaagaga 38416162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 41859997 - 41860079
Alignment:
Q  4 gaattttaattaagggaccaaaacgatatta--cctaaatacttaagagacctaatatgcaatttaaccattttcttattttt 84  Q
    ||||||||||||||||||||||  |||| ||  |||||||| |||||||||| || ||||||||||||| |||| || |||||    
T  41859997 gaattttaattaagggaccaaagtgatactatacctaaatagttaagagaccaaaaatgcaatttaaccttttttttcttttt 41860079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5088445 - 5088511
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||  |||||||| ||||| |||||||||| |||||||||| || || |||||||    
T  5088445 atcgaattttaattagaggaccaaagcgatactacctaaatagttaagagaccaaaaatacaattta 5088511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9693235 - 9693301
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||| ||||||||||||||||||| ||||| |||||||||  ||||| |||| || ||||||||||    
T  9693235 atcgatttttaattaagggaccaaatcgatactacctaaatcgttaagggaccaaaaatgcaattta 9693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 15476331 - 15476261
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatttt 75  Q
    |||||||||||||||| |||| ||||| |||||||||| ||||| |||| || ||  ||||||||||||||    
T  15476331 aattttaattaagggatcaaagcgatactacctaaatagttaagggaccaaaaatataatttaaccatttt 15476261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 19205009 - 19204947
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  19205009 aattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 19204947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38416451 - 38416517
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||| || |||| ||||| |||||||||| |||||||||| || || |||||||    
T  38416451 atcgaattttaattaagtgagcaaagcgatactacctaaataattaagagaccaaaaatacaattta 38416517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 9692987 - 9692946
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaata 42  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  9692987 atcgaattttaattaagggaccaaagcgatactacctaaata 9692946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 15267306 - 15267242
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||| |||||||||||||| ||||| |||| ||||| |||| || |||||||||||||    
T  15267306 aattttaattaaaggaccaaaacgatactacct-aatagttaagggaccaaaaatgcaatttaacc 15267242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 17736564 - 17736616
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||| ||||    
T  17736564 atcgaattttaattaatggaccaaagcgatactacctaaatagttaagggacc 17736616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25923187 - 25923119
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaac 69  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||| || | || || |||||||||    
T  25923187 atcgaattttaattaaaggaccaaaccgatactacctaaatagttaagggatcaaaaatacaatttaac 25923119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 33699342 - 33699278
Alignment:
Q  3 cgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||| |||| |||||||||||||| |||||||||| ||||| ||||  | ||||||||||    
T  33699342 cgaattttagttaaaggaccaaaacgatactacctaaatagttaagggaccataaatgcaattta 33699278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 41372479 - 41372527
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||||||||  |||||| ||||| ||||    
T  41372479 aattttaattaagggaccaaaacgatattaattaaatagttaagggacc 41372527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 7399399 - 7399442
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||    
T  7399399 aattttaattaagggaccaaagcgatactacctaaataattaag 7399442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26289337 - 26289400
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaat 64  Q
    ||||||||||||||||||||||||||||||| ||  |||||| ||||  |||| || |||||||    
T  26289337 atcgaattttaattaagggaccaaaacgatactatttaaatagttaaaggaccaaaaatgcaat 26289400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3878550 - 3878484
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||  ||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  3878550 atcgaattttaattaaacgaccaaagcgatactacctaaataattaagggaccaaaaatacaattta 3878484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 5087873 - 5087811
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    |||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || || ||||||    
T  5087873 gaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaattcaattt 5087811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5460257 - 5460191
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |  ||||||| ||||| |||| || || |||||||    
T  5460257 atcgaattttaattaagggaccaaagcgatactgtctaaatagttaagggaccaaaaatacaattta 5460191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 10656159 - 10656097
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  10656159 aattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 10656097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15267557 - 15267603
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  15267557 atcgaattttagttaagggaccaaagcgatactacctaaatagttaa 15267603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16353471 - 16353537
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||| ||||||||| ||||| ||| |||||| ||||| || | || ||||||||||    
T  16353471 atcgaattttaattaggggaccaaagcgatactacttaaatagttaagggatcaaaaatgcaattta 16353537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17861108 - 17861062
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||||||||||| | | |||||||||||| ||||    
T  17861108 atcgaattttaattaagggaccaaagcaacattacctaaatagttaa 17861062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33763225 - 33763290
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||| |||||| ||||| || ||||||| ||||| |||| || ||||||||||    
T  33763225 atcgaattttaattaaggaaccaaagcgatacta-ctaaatagttaagggaccaaaaatgcaattta 33763290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35263811 - 35263877
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| |||||||||||||   ||| |||||||||| ||||| |||| || ||||||||||    
T  35263811 atcgaattttagttaagggaccaaagtcatactacctaaataattaagggaccaaaaatgcaattta 35263877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 36751967 - 36751925
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||    
T  36751967 aattttaattaagggaccaaatcgatactacctaaatagttaa 36751925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 12695007 - 12695068
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    |||||||||||||||||||||  |||| |||||||||| ||||| |||  || |||||||||    
T  12695007 aattttaattaagggaccaaagtgatactacctaaatagttaagggactaaaaatgcaattt 12695068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 15670472 - 15670537
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||   |||||||||||| |||||||||| ||||| |||| || || ||||||||||    
T  15670472 aattttaattaaataaccaaaacgatactacctaaatagttaagggaccaaaaatacaatttaacc 15670537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 16353219 - 16353182
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaata 42  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  16353219 aattttaattaagggaccaaatcgatactacctaaata 16353182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 146538 - 146590
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||| ||||  ||| ||||||||| |||||||||| ||||||||||    
T  146538 atcgaattttatttaacagacgaaaacgataatacctaaatagttaagagacc 146590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 5460272 - 5460332
Alignment:
Q  10 taattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||| ||||| || ||||||| ||||| |||| || || ||||||||||    
T  5460272 taattaagggaccaaagcgatactatctaaatagttaagggaccaaaaatacaatttaacc 5460332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 26289085 - 26289037
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||| ||| ||||| |||||||||| ||||| ||||    
T  26289085 aattttaattaagggacgaaagcgatactacctaaatagttaagggacc 26289037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 33762972 - 33762924
Alignment:
Q  1 atcgaattttaatt-aagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||| ||||||||||| ||||| |||||||||| |||||    
T  33762972 atcgaattttaatttaagggaccaaagcgatactacctaaataattaag 33762924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 25218153 - 25218083
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||| |||| || ||| ||||||||||    
T  25218153 atcgaattttaattaagggaccaaagcgatattacctaaatagttaagggaccaaaaatgaaatttaacca 25218083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 15985531 - 15985452
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttcttattttt 84  Q
    ||||||||||||||||||||||||||| || | ||||| |||||||||| || ||||||||||||| |||| || |||||    
T  15985531 aattttaattaagggaccaaaacgatactagcaaaatagttaagagaccaaaaatgcaatttaacctttttttttttttt 15985452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 21217916 - 21217850
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  21217916 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 21217850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 46200553 - 46200487
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||| |||| || ||||||||||    
T  46200553 atcgaattttaattaagggaccaaaatgatactacctaaatagttaagggaccaaaaatgcaattta 46200487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 54136160 - 54136094
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  54136160 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 54136094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 24504257 - 24504326
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||| |||| || ||| |||||||||    
T  24504257 atcgaattttaattaaaggactaaaacgatattacctaaatagttaagggaccaaaaatgtaatttaacc 24504326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 25058898 - 25058833
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||||||  || |||||||||||||    
T  25058898 aattttaattaagggaccaaagcgatactacctaaatagttaagagacaaaaaatgcaatttaacc 25058833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 33625933 - 33625868
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || |||||||||    
T  33625933 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattt 33625868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 46620996 - 46620931
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||| |||| || |||||||||    
T  46620996 atcgaattttaattaagggaccaaaacaatactacctaaatagttaagggaccaaaaatgcaattt 46620931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 46621244 - 46621313
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||| |||| |||||||||||||| |||||||||| ||||| |||| || |||||||||||||    
T  46621244 atcgaattttagttaaaggaccaaaacgatactacctaaatagttaagggaccaaaaatgcaatttaacc 46621313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 1205447 - 1205379
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaac 69  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| ||  |||||||||||    
T  1205447 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaagtgcaatttaac 1205379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 46200805 - 46200868
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||| || || |||||||||| |||||||||| || ||||||||||    
T  46200805 gaattttaattaagggaccaaagcgttactacctaaatagttaagagaccaaaaatgcaattta 46200868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 1157268 - 1157202
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    |||||||||||||| |||||| ||||||||| |||||| ||||| |||| || ||||||||||||||    
T  1157268 aattttaattaaggaaccaaagcgatattacttaaatagttaagggaccaaaaatgcaatttaacca 1157202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9010574 - 9010508
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  9010574 atcgaattttaattaagggaccaaagtgatactacctaaataattaagggaccaaaaatgcaattta 9010508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21218164 - 21218230
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| || | || ||||||||||    
T  21218164 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggatcaaaaatgcaattta 21218230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29864492 - 29864558
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  29864492 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 29864558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 52915021 - 52914955
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  52915021 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 52914955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 66
Target Start/End: Original strand, 33882270 - 33882331
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || |||||||||    
T  33882270 aattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattt 33882331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34959148 - 34959217
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||| |||||| ||||| |||||||||| ||||| |||| ||  ||||||||||||    
T  34959148 atcgaattttaattaaggaaccaaagcgataatacctaaatagttaagggaccaaaattgcaatttaacc 34959217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 44710720 - 44710785
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    |||||||||||||||||| |||||||||||| ||| |||||||||||| || | || |||||||||    
T  44710720 atcgaattttaattaaggaaccaaaacgatactacataaatacttaagggatcaaaaatgcaattt 44710785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 8247063 - 8247131
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaac 69  Q
    |||||||||||||||||||||||||   |||||||||||||| ||||| |||| || || |||||||||    
T  8247063 atcgaattttaattaagggaccaaagaaatattacctaaatagttaagggaccaaaaatacaatttaac 8247131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 27347914 - 27347978
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatt 65  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||  || ||| ||||||||    
T  27347914 atcgaattttaattaagggaccaaatcgatactacctaaatagttaaggaacataaaatgcaatt 27347978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1157523 - 1157594
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccat 72  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||| |||  || || ||||||||||||    
T  1157523 atcgaattttaattaaaggaccaaagcgatactacctaaatagttaagggactaaaaatacaatttaaccat 1157594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25218401 - 25218448
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||    
T  25218401 atcgaattttaattaaaggaccaaaacgatactacctaaatagttaag 25218448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29864245 - 29864198
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  29864245 atcgaattttaattaagggaccaaagcgatactacctaaatagttaag 29864198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37515770 - 37515817
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  37515770 atcgaattttaattaagggaccaaagcgatactacctaaatagttaag 37515817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2738949 - 2738879
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    |||||||||||||||| |||||||| ||||| ||| |||||| ||||| || | || ||||||||||||||    
T  2738949 atcgaattttaattaaaggaccaaagcgatactacttaaatagttaagggatcaaaaatgcaatttaacca 2738879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18862758 - 18862824
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| ||| |||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  18862758 atcgaattttaattaaaggatcaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 18862824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 33626181 - 33626247
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || ||| ||||||    
T  33626181 atcgaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgaaattta 33626247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 34958897 - 34958835
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  34958897 aattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 34958835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 43317200 - 43317262
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||||| |||||||||| ||| |||||  || ||||||||||    
T  43317200 aattttaattaagggaccaaagcgatactacctaaatagttaggagactaaaaatgcaattta 43317262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 46535592 - 46535526
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  46535592 atcgaattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 46535526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 54191901 - 54191967
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||||||  || ||||||| ||||| |||| || || |||||||    
T  54191901 atcgaattttaattaagggaccaaaacgatgctatctaaatagttaagggaccaaaaatacaattta 54191967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4793916 - 4793957
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaata 42  Q
    ||||||||||| ||||||||||||||||||| ||||||||||    
T  4793916 atcgaattttagttaagggaccaaaacgatactacctaaata 4793957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 10014529 - 10014468
Alignment:
Q  6 attttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||| | ||| |||||||||| ||||| |||| || ||||||||||    
T  10014529 attttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 10014468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 10021670 - 10021609
Alignment:
Q  6 attttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||| | ||| |||||||||| ||||| |||| || ||||||||||    
T  10021670 attttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 10021609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 45911644 - 45911579
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||   ||| || |||||||||||||    
T  45911644 aattttaattaagggaccaaagcgatactacctaaatagttaatgaaccaaaaatgcaatttaacc 45911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1205694 - 1205766
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatt 73  Q
    ||||||||||||||||||||  ||| ||||| | |||||||| ||||| |||| || |||||||||| |||||    
T  1205694 atcgaattttaattaagggagaaaagcgatactgcctaaatagttaagggaccaaaaatgcaatttagccatt 1205766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9010822 - 9010874
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||||||||||  |||| |||||||||| ||||| ||||    
T  9010822 atcgaattttaattaagggaccaaagagatactacctaaatagttaagggacc 9010874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 8246833 - 8246790
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||    
T  8246833 aattttaattaagggaccaaaatgatattatctaaataattaag 8246790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 10014784 - 10014827
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||||||||| |||||| |||||||||| |||||    
T  10014784 aattttaattaagggaccaatacgatactacctaaatagttaag 10014827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 10021925 - 10021968
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||||||||| |||||| |||||||||| |||||    
T  10021925 aattttaattaagggaccaatacgatactacctaaatagttaag 10021968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 25593408 - 25593455
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||||||| ||| | |||||||| |||||    
T  25593408 atcgaattttaattaagggaccaaaacaatactccctaaatagttaag 25593455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 29970258 - 29970195
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaa 68  Q
    |||||||||||||||| |||| ||||| |||||||||| ||| | |||| || |||||||||||    
T  29970258 aattttaattaagggatcaaagcgatactacctaaatagttatgggaccaaaaatgcaatttaa 29970195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40067417 - 40067370
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||||  |||||||| |||||||||||||||| |||||    
T  40067417 atcgaattttaattagaggaccaaagcgatattacctaaatagttaag 40067370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4965940 - 4965894
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    |||||||||||||||||||| |||| ||||| |||||||||| ||||    
T  4965940 atcgaattttaattaagggagcaaagcgatactacctaaatagttaa 4965894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8751356 - 8751290
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||||  ||| |||||||||| ||||  |||| || ||||||||||    
T  8751356 atcgaattttagttaagggaccaaaattatactacctaaatagttaaaggaccaaaaatgcaattta 8751290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 9657732 - 9657670
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||| ||  |||||| ||||| |||| || || |||||||    
T  9657732 aattttaattaagggaccaaaacgatactaattaaatagttaagggaccaaaaatacaattta 9657670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11242781 - 11242847
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||| |||||||||||  |||| |||||||||| ||||| |||| || ||| ||||||    
T  11242781 atcgaattttaatcaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgtaattta 11242847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32384722 - 32384656
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||  |||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  32384722 atcgaattttaattagaggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 32384656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45911891 - 45911957
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||  |||| |||||||||| ||| | |||| || || |||||||    
T  45911891 atcgaattttaattaagggaccaaagtgatactacctaaatagttaggggaccaaaaatacaattta 45911957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 48210013 - 48209951
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||  |||| |||||||||| ||||| |||| || ||| ||||||    
T  48210013 aattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgtaattta 48209951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 22831119 - 22831184
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| || | ||||| ||||| |||| || || ||||||||||    
T  22831119 aattttaattaagggaccaaagcgatactagcaaaatagttaagggaccaaaaatccaatttaacc 22831184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 48
Target Start/End: Complemental strand, 53645518 - 53645473
Alignment:
Q  3 cgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||| ||||| || ||||||| |||||    
T  53645518 cgaattttaattaagggaccaaagcgatactatctaaatagttaag 53645473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 40067668 - 40067712
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||| ||||||||||||| ||||| |||||||||| |||||    
T  40067668 gaattttagttaagggaccaaagcgatactacctaaatagttaag 40067712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 46; Significance: 7e-17; HSPs: 4)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 65808 - 65735
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattt 74  Q
    ||||||||||||||||| ||||||| | |||||||||||||| |||||||||| || ||||| |||||||||||    
T  65808 atcgaattttaattaagagaccaaagcaatattacctaaatagttaagagaccaaaaatgcagtttaaccattt 65735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 73140 - 73067
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattt 74  Q
    ||||||||||||||||| ||||||| | |||||||||||||| |||||||||| || ||||| |||||||||||    
T  73140 atcgaattttaattaagagaccaaagcaatattacctaaatagttaagagaccaaaaatgcagtttaaccattt 73067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 66059 - 66122
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||| || ||||||||| |||||||||| ||||| |||| || ||| ||||||    
T  66059 gaattttaattaaggaactaaaacgatactacctaaatagttaagcgaccaaaaatgtaattta 66122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 73391 - 73454
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||| || ||||||||| |||||||||| ||||| |||| || ||| ||||||    
T  73391 gaattttaattaaggaactaaaacgatactacctaaatagttaagcgaccaaaaatgtaattta 73454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 7e-17; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24604944 - 24604875
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || |||||||||||||    
T  24604944 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaatttaacc 24604875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13155908 - 13155856
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  13155908 atcgaattttaattaagggaccaaaacgatactacctaaatagttaagagacc 13155856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13160764 - 13160712
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  13160764 atcgaattttaattaagggaccaaaacgatactacctaaatagttaagagacc 13160712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3338546 - 3338480
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||  || ||||||||||    
T  3338546 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggacaaaaaatgcaattta 3338480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19135763 - 19135829
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||  |||| || ||||||||||    
T  19135763 atcgaattttaattaagagatcaaaacgatactacctaaatacttaatggaccaaaaatgcaattta 19135829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 31029590 - 31029524
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||| || | || |||||||||||||    
T  31029590 gaattttaattaagggaccaaagcgatactacctaaataattaagggatcaaaaatgcaatttaacc 31029524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33544891 - 33544817
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatttt 75  Q
    ||||||||||||||||||||||||| | ||| ||| |||||| ||||| |||| || ||||||||||||| ||||    
T  33544891 atcgaattttaattaagggaccaaagcaatactacttaaatagttaagggaccaaaaatgcaatttaaccttttt 33544817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24605190 - 24605242
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||    
T  24605190 atcgaattttaattaagggaccaaatcgatactacctaaatagttaagggacc 24605242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 3288999 - 3288933
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||| |||||||||| ||||| ||||  | ||||||||||    
T  3288999 atcgaattttagttaagggaccaaagcgatactacctaaatagttaagggaccataaatgcaattta 3288933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 3289231 - 3289293
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||| |||||| |||||||||||||||| || || |||| || ||||||||||    
T  3289231 aattttaattaaggcaccaaagcgatattacctaaatagtttagggaccaaaaatgcaattta 3289293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 25551653 - 25551727
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatttt 75  Q
    ||||||||||||||| ||||||||| ||||| ||| |||||| ||||| |||| || || |||||||||| ||||    
T  25551653 atcgaattttaattaggggaccaaagcgatactacttaaatagttaagggaccaaaaatacaatttaaccttttt 25551727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33329275 - 33329209
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| | ||| |||||||||| ||||| || | || ||||||||||    
T  33329275 atcgaattttaattaagggaccaaagcaatactacctaaatagttaagggatcaaaaatgcaattta 33329209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33346547 - 33346501
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  33346547 atcgaattttaattaagggaccaaagcgatactacctaaatagttaa 33346501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35119128 - 35119174
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  35119128 atcgaattttaattaagggaccaaagcgatactacctaaatagttaa 35119174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 11524831 - 11524782
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||| ||||    
T  11524831 gaattttaattaagggaccaaagcgatactacctaaatagttaagggacc 11524782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 29010022 - 29009957
Alignment:
Q  2 tcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||| ||||| ||| |||||| ||||| |||| || || |||||||    
T  29010022 tcgaattttaattaagggaccaaagcgatactacgtaaatagttaagggaccaaaaattcaattta 29009957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 33971993 - 33971928
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||  ||||| ||| |||||||||| ||||| |||| || |||||||||||||    
T  33971993 aattttaattaagggataaaaacaatactacctaaatagttaagggaccaaaaatgcaatttaacc 33971928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 1860803 - 1860874
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatt 73  Q
    |||||||||||||||||||||||||  ||||  ||||||||| ||||| |||| || |||||||||| |||||    
T  1860803 atcgaattttaattaagggaccaaagagata-cacctaaatagttaagggaccaaaaatgcaatttagccatt 1860874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3338792 - 3338844
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||||| |||||||||| ||| |||||| ||||| ||||    
T  3338792 atcgaattttaattaagggatcaaaacgatactacttaaatagttaagggacc 3338844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 11524771 - 11524728
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||    
T  11524771 gaattttaattaagggaccaaagcgatactacctaaatagttaa 11524728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 11525085 - 11525148
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||| |||||||||||| ||||| |||||||||  ||||| |||| || ||||||||||    
T  11525085 gaattttaaataagggaccaaaccgatactacctaaattgttaagggaccaaaaatgcaattta 11525148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1158657 - 1158611
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||    
T  1158657 atcgaattttaattaaaggaccaaagcgatactacctaaatagttaa 1158611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9173970 - 9173904
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||  |||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  9173970 atcgaattttaattagaggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 9173904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 14336971 - 14336905
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||||| || ||||||| ||||| || | || ||||||||||    
T  14336971 atcgaattttaattaaaggaccaaagcgatactagctaaataattaagggatcaaaaatgcaattta 14336905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 35132666 - 35132604
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||| ||||| |||||||||| ||||  |||| || ||||||||||    
T  35132666 aattttaattatgggaccaaagcgatactacctaaatagttaatggaccaaaaatgcaattta 35132604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29027285 - 29027337
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  29027285 atcgaattttaattaagggaccaaaacgatactacctaaatagttaagagacc 29027337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 40040231 - 40040156
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttc 76  Q
    |||||||||||||||||| |||||| ||||| |||||||||| ||||| |||| || |||||||||| ||||||||    
T  40040231 atcgaattttaattaaggtaccaaagcgatactacctaaatagttaagggaccaaaaatgcaatttagccattttc 40040156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3869266 - 3869332
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| |||| || || |||||||    
T  3869266 atcgaattttaattaagggaccaaaacgatactacctaaatagttaagggaccaaaaatacaattta 3869332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 16645865 - 16645931
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||| ||| |||||||||| ||||| |||| || ||||||||||    
T  16645865 atcgaattttaattaagggaccaaaacaatactacctaaatagttaagggaccaaaaatgcaattta 16645931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 24456803 - 24456737
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  24456803 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 24456737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 37393543 - 37393477
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| |||| || || ||||||||||    
T  37393543 gaattttaattaagggaccaaaacgatactacctaaatagttaagggaccaaaaatacaatttaacc 37393477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39240099 - 39240033
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||| |||| || ||||||||||    
T  39240099 atcgaattttaattaagggaccaaaatgatactacctaaatagttaagggaccaaaaatgcaattta 39240033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 39240340 - 39240406
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||| |||| || ||||||||||||||    
T  39240340 aattttaattaagagaccaaaacgatactacctaaataattaagggaccaaaaatgcaatttaacca 39240406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 8654257 - 8654322
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||| |||||||||| |||||||||||||| ||||| |||| || |||||||||||||    
T  8654257 aattttaattaaaggaccaaaacaatattacctaaatagttaagggaccaaaaatgcaatttaacc 8654322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1826108 - 1826174
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  1826108 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 1826174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 1860553 - 1860619
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  1860553 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 1860619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24456969 - 24457035
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||  ||||| |||||||||| ||||| |||| || ||||||||||    
T  24456969 atcgaattttaattaagggaccaaggcgatactacctaaatagttaagggaccaaaaatgcaattta 24457035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 26736190 - 26736124
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    ||||||||  ||||||||||| ||||| |||||||||| |||||||||| || ||||||||||||||    
T  26736190 aattttaaaaaagggaccaaagcgatactacctaaatagttaagagaccaaaaatgcaatttaacca 26736124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 30872852 - 30872786
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| | ||| |||||||||| ||||| |||| || ||||||||||    
T  30872852 atcgaattttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 30872786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35224084 - 35224150
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||||||||| || ||||||| ||||| |||| || ||||||||||    
T  35224084 atcgaattttagttaagggaccaaaacgatactaactaaatagttaagggaccaaaaatgcaattta 35224150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 37393794 - 37393860
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||| |||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  37393794 atcgaattttaattaagggatcaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 37393860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 758409 - 758344
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| | || || |||||||||||||    
T  758409 aattttaattaagggaccaaagcgatactacctaaatagttaaggggccaaaaatgcaatttaacc 758344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 8654002 - 8653939
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||||| |||||||||| ||| | |||| || || |||||||    
T  8654002 gaattttaattaagggaccaaaacgatactacctaaatagttaggggaccaaaaatacaattta 8653939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 18017856 - 18017793
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||| ||||||| | ||| |||||||||| ||||| |||| |||||||||||||    
T  18017856 gaattttaattaagtgaccaaagcaatactacctaaatagttaagggaccaaatatgcaattta 18017793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 18622067 - 18622130
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||| ||||| || ||||||| |||||||||| ||  |||||||||    
T  18622067 gaattttaattaagggaccaaagcgatactatctaaatagttaagagaccaaaagtgcaattta 18622130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44678386 - 44678320
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| | ||| |||||||||| ||||| |||| || ||||||||||    
T  44678386 atcgaattttagttaagggaccaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 44678320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7041698 - 7041657
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaata 42  Q
    ||||||||||||||||||||||||| ||||| ||||||||||    
T  7041698 atcgaattttaattaagggaccaaagcgatactacctaaata 7041657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23244832 - 23244901
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||| |||||||||||| ||||| || ||||||| ||||| |||| || ||||||| |||||    
T  23244832 atcgaattttaactaagggaccaaagcgatactatctaaatagttaagggaccaaaaatgcaatctaacc 23244901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29027041 - 29027000
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaata 42  Q
    |||||||||||||||||||||||||| |||| ||||||||||    
T  29027041 atcgaattttaattaagggaccaaaatgatactacctaaata 29027000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 39912240 - 39912305
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||||||  |||| |||||||||| ||||| |||| || ||| |||||||||    
T  39912240 aattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaatgtaatttaacc 39912305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 5 - 65
Target Start/End: Original strand, 14920732 - 14920792
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatt 65  Q
    ||||||||||||||||||||| ||||| ||| |||||| ||||| |||| || ||||||||    
T  14920732 aattttaattaagggaccaaagcgatactacttaaatagttaagggaccaaaaatgcaatt 14920792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36344030 - 36343982
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaaga 49  Q
    ||||||||||||||||||||||||||  ||| |||||||||| ||||||    
T  36344030 atcgaattttaattaagggaccaaaataatactacctaaataattaaga 36343982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 40094541 - 40094497
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||    
T  40094541 gaattttaattaagggaccaaagcgatactacctaaatagttaag 40094497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 21515517 - 21515568
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagac 52  Q
    ||||||||||||||||||||||||| ||||| ||| |||||| |||| ||||    
T  21515517 atcgaattttaattaagggaccaaagcgatactacgtaaatagttaaaagac 21515568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 31230933 - 31230996
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||| | ||| |||||||||| ||||| |||| || ||| ||||||    
T  31230933 gaattttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaatgtaattta 31230996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 119186 - 119120
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||| |||||||||||   ||| |||||||||| ||||| |||| || ||||||||||    
T  119186 atcgaattttaatcaagggaccaaagtaatactacctaaatagttaagggaccaaaaatgcaattta 119120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 5416881 - 5416815
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||  |||||||||||||| |||||||||| ||| | |||| || || |||||||    
T  5416881 atcgaattttaattagaggaccaaaacgatactacctaaatagttaggggaccaaaaatacaattta 5416815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 5417134 - 5417196
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||| ||||||||||||| ||||| |||||||||| ||||| |||| || ||||| ||||    
T  5417134 aattttagttaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcagttta 5417196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6844757 - 6844823
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||| ||||||||||| || |||| ||||  |||||||||| |||||||||| || ||||||||||    
T  6844757 atcgatttttaattaagagatcaaagcgatgctacctaaatagttaagagaccaaaaatgcaattta 6844823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 11198526 - 11198588
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||||| |  ||||||| ||||| |||| || ||||||||||    
T  11198526 aattttaattaagggaccaaagcgatactgtctaaatagttaagggaccaaaaatgcaattta 11198588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35223843 - 35223777
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| | ||||||||||| ||||| |||||||||| | ||| |||| || ||||||||||    
T  35223843 atcgaattttagtcaagggaccaaagcgatactacctaaatagtaaagggaccaaaaatgcaattta 35223777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 6843560 - 6843495
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||| || |  |||| |||||||||| ||||| |||| || |||||||||||||    
T  6843560 aattttaattaagggatcatagtgatactacctaaatagttaagggaccaaaaatgcaatttaacc 6843495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 12873368 - 12873429
Alignment:
Q  6 attttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||| ||  |||||| ||||| |||| || || |||||||    
T  12873368 attttaattaagggaccaaaacgatactaattaaatagttaagggaccaaaaatacaattta 12873429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 14920480 - 14920416
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatt 65  Q
    ||||||||||||||||  ||||||||| ||| |||||||||| |||||  ||| || ||||||||    
T  14920480 atcgaattttaattaaatgaccaaaacaatactacctaaatagttaaggaaccaaaaatgcaatt 14920416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 31230678 - 31230630
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||||||  |||| |||||||||| ||||| ||||    
T  31230678 aattttaattaagggaccaaagtgatactacctaaatagttaagggacc 31230630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 21169731 - 21169668
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaa 68  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||| || || ||||||||    
T  21169731 aattttaattaagggaccaaaacgatactacctaaatagttaagagaccaaaaatacaatttaa 21169668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 34521574 - 34521641
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaa 68  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || |||||||||||    
T  34521574 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaatttaa 34521641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 12123159 - 12123093
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||| |||| || ||||||||||    
T  12123159 atcgaattttaattaagggaccaaaatgatactacctaaatagttaagggaccaaaaatgcaattta 12123093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 34521335 - 34521269
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  34521335 atcgaattttaattaagggaccaaagcgatactacctaaataattaagggaccaaaaatgcaattta 34521269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 43899180 - 43899114
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||  |||| || ||||||||||    
T  43899180 atcgaattttaattaagggaccaaaacgatgttacctaaatagttaaaggaccaaaaatgcaattta 43899114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44069192 - 44069126
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||| |||| || ||||||||||    
T  44069192 atcgaattttagttaagggaccaaaacgatactacctaaatagttaagggaccaaaaatgcaattta 44069126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 45871766 - 45871700
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  45871766 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 45871700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 54107738 - 54107672
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  54107738 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 54107672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 35580270 - 35580335
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || |||||||||||||    
T  35580270 aattttaattaagggaccaaatcgatactacctaaatagttaagggaccaaaaatgcaatttaacc 35580335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 40410777 - 40410712
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || |||||||||||||    
T  40410777 aattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaatttaacc 40410712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 45872006 - 45872058
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  45872006 atcgaattttaattaagggaccaaaacgatactacctaaatagttaagggacc 45872058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4846913 - 4846979
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||| |||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  4846913 atcgaattttaattaagggatcaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 4846979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7937712 - 7937646
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||  ||| || ||||||||||    
T  7937712 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagcaaccaaaaatgcaattta 7937646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15862251 - 15862185
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||| ||||||| ||| ||||||    
T  15862251 atcgaattttaattaaaggaccaaagcgatactacctaaataattaagggacctaaaatggaattta 15862185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17102453 - 17102387
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||  ||||| |||||||||||||| |||||| ||| || ||||||||||    
T  17102453 atcgaattttaattaagggaagaaaacaatattacctaaataattaagaaaccaaaaatgcaattta 17102387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26332640 - 26332705
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  26332640 atcgaattttaattaagggaccaaagcgatactacctaaatagttaag-gaccaaaaatgcaattta 26332705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 41997884 - 41997822
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||| |||||||||| ||||| |||| || ||| ||||||    
T  41997884 aattttaattaagggaccaaaacgatactacctaaatagttaagggaccaaaaatgtaattta 41997822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 43899391 - 43899457
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||| ||||||||| |||||||||||||||| |||||  ||| || ||||||||||    
T  43899391 atcgaattttaattaggggaccaaagcgatattacctaaatagttaaggaaccaaaaatgcaattta 43899457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 50819534 - 50819600
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| ||||| || | |||||||||| || ||||||||||    
T  50819534 atcgaattttaattaagggaccaaagcgatactaccttaacagttaagagaccaaaaatgcaattta 50819600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 50856330 - 50856264
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| ||||| || | |||||||||| || ||||||||||    
T  50856330 atcgaattttaattaagggaccaaagcgatactaccttaacagttaagagaccaaaaatgcaattta 50856264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 52609679 - 52609745
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||| ||||||    
T  52609679 atcgaattttaattaagggaccaaagcgatagtacctaaatagttaagggaccaaaaatggaattta 52609745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 54108437 - 54108503
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| || ||||||| ||||| |||| || ||||||||||    
T  54108437 atcgaattttaattaagggaccaaagcgatactagctaaataattaagggaccaaaaatgcaattta 54108503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 12123400 - 12123465
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||| |||||||||    
T  12123400 aattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgaaatttaacc 12123465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 14353111 - 14353046
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| || | || |||||||||||||    
T  14353111 aattttaattaagggaccaaagcgatactacctaaataattaagggatcaaaaatgcaatttaacc 14353046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34630051 - 34629982
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||||||||||||| ||| |||||| ||||| |||| || ||  |||||||||    
T  34630051 atcgaattttaattaagggaccaaaacgatactacttaaatagttaagggaccaaaaatataatttaacc 34629982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 41208466 - 41208401
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||| ||| |||||| ||||| |||| || |||||||||||||    
T  41208466 aattttaattaagggaccaaagcgatactacttaaatagttaagggaccaaaaatgcaatttaacc 41208401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 19124493 - 19124536
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||||||| |||||||||| |||||    
T  19124493 aattttaattaagggaccaaaacgatactacctaaatagttaag 19124536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 7274718 - 7274656
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||| ||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  7274718 aattttaattaagagaccaaagcgatactacctaaatatttaagggaccaaaaatgcaattta 7274656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8846145 - 8846079
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||| ||||||||| ||| |||||||||| ||||| |||| || ||||||||||    
T  8846145 atcgaattttagttaagagaccaaaacaatactacctaaatagttaagggaccaaaaatgcaattta 8846079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 19124258 - 19124192
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||| ||||||||| | ||||||| |||||| ||||| |||| || ||||||||||    
T  19124258 atcgaattttaattaggggaccaaagcaatattacttaaatagttaagggaccaaaaatgcaattta 19124192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 33812864 - 33812926
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||| ||| ||||| |||||||||| |||||||||| || ||| ||||||    
T  33812864 aattttaattaagggactaaagcgatactacctaaatatttaagagaccaaaaatgaaattta 33812926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38911535 - 38911581
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    |||||||||||||||| |||||||||| |||||||||||||| ||||    
T  38911535 atcgaattttaattaaaggaccaaaacaatattacctaaataattaa 38911581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 41208721 - 41208783
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||  || ||||||||||    
T  41208721 aattttaattaagggaccaaagcgatactacctaaatagttaagggactaaaaatgcaattta 41208783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45171384 - 45171450
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||| |||  || ||||||||||    
T  45171384 atcgaattttaattaatggaccaaagcgatactacctaaatagttaagggactaaaaatgcaattta 45171450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 52606193 - 52606132
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||||| ||| |||||| ||||| |||| || ||||||||||    
T  52606193 aattttaattaagggaccaaaacgatactacataaatagttaagggacc-aaaatgcaattta 52606132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 54081352 - 54081279
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatttt 75  Q
    |||||||||||||||||| |||||| ||||| | |||||||| ||||| |||| || || |||||||||||||||    
T  54081352 atcgaattttaattaagg-accaaagcgatactgcctaaatagttaagggaccaaaaatacaatttaaccatttt 54081279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 54081601 - 54081667
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| | ||| |||||||||| ||||| |||| || || |||||||    
T  54081601 atcgaattttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaatacaattta 54081667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 7274959 - 7275024
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattt 66  Q
    |||||||||||||||||||||||||  |||| |||||||||| ||||  |||| || |||||||||    
T  7274959 atcgaattttaattaagggaccaaagtgatactacctaaatagttaacggaccaaaaatgcaattt 7275024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 46766687 - 46766622
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||||||||||||||||||||||| | ||||| | ||  |||| || |||||||||||||    
T  46766687 aattttaattaagggaccaaaacgatattagcaaaatagtaaaaggaccaaaaatgcaatttaacc 46766622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35753472 - 35753408
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatt 65  Q
    |||||||||||||||||  |||||| ||||| |||||||||| ||||| |||| || ||||||||    
T  35753472 atcgaattttaattaagaaaccaaagcgatactacctaaatagttaagggaccaaaaatgcaatt 35753408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 2078793 - 2078868
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttcttat 80  Q
    ||||||||||||||||||||| ||||||||  |||||| ||||| |||  || || |||||||||| |||| ||||    
T  2078793 aattttaattaagggaccaaagcgatattaattaaatagttaagggactaaaaatacaatttaaccttttttttat 2078868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 7937881 - 7937952
Alignment:
Q  2 tcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatt 73  Q
    ||||||||||||||||||||||||  |||| |||||||||| ||||  |||| || ||| |||||| |||||    
T  7937881 tcgaattttaattaagggaccaaagtgatactacctaaatagttaaaggaccaaaaatgaaatttagccatt 7937952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 10757028 - 10757071
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    |||||||||||||||||||||||||||| | |||||||| ||||    
T  10757028 gaattttaattaagggaccaaaacgatactgcctaaatagttaa 10757071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 26332381 - 26332322
Alignment:
Q  8 tttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||| ||||| |||||||||| ||| | |||| || ||||||||||    
T  26332381 tttaattaagggaccaaagcgatactacctaaatagttaggggaccaaaaatgcaattta 26332322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 28688311 - 28688354
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||| ||||| |||||||||| |||||    
T  28688311 aattttaattaagggaccaaagcgatactacctaaatagttaag 28688354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 31514182 - 31514245
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||| |||||||| ||||| |||||||||| ||||| |||  || ||||||||||    
T  31514182 gaattttaattaaaggaccaaagcgatactacctaaatagttaagggactaaaaatgcaattta 31514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 52268423 - 52268486
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||| |||||||||||||| || ||||||| ||||  |||| || ||||||||||    
T  52268423 gaattttaattaaaggaccaaaacgatactaactaaatagttaatggaccaaaaatgcaattta 52268486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 7950344 - 7950278
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||| ||||||||| ||| ||| |||||| ||||| |||  || ||||||||||    
T  7950344 atcgaattttaattaagagaccaaaacaatactacataaatagttaagggactaaaaatgcaattta 7950278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10756787 - 10756721
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||  |||| |||| || || |||||||    
T  10756787 atcgaattttagttaagggaccaaagcgatactacctaaatagctaagggaccaaaaatacaattta 10756721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14353364 - 14353430
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||  ||||| |||||||||| ||||| |||| || || |||||||    
T  14353364 atcgaattttatttaagggaccaatgcgatactacctaaatagttaagggaccaaaaatacaattta 14353430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 41998135 - 41998197
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||  |||| |||||||||| ||||| |||| || || |||||||    
T  41998135 aattttaattaagggaccaaagtgatactacctaaatagttaagggaccaaaaatacaattta 41998197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 44069440 - 44069506
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||  |||||||| ||||| |||||||||| ||||| |||| || || |||||||    
T  44069440 atcgaattttaattagaggaccaaagcgatactacctaaatagttaagggaccaaaaatacaattta 44069506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 51170698 - 51170764
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||  || |||||||||| |||||||||| ||||| || | || ||||||||||    
T  51170698 atcgaattttaattaaatgatcaaaacgatactacctaaatagttaagggatcaaaaatgcaattta 51170764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 40926076 - 40926011
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||| || |||| ||||| ||| |||||| |||| ||||| || |||||||||||||    
T  40926076 aattttaattaagagatcaaagcgatactacataaatagttaaaagaccaaaaatgcaatttaacc 40926011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 49222349 - 49222394
Alignment:
Q  8 tttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||| |||||||||||||||||| || ||||||| ||||||||||    
T  49222349 tttaactaagggaccaaaacgatactatctaaatagttaagagacc 49222394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 7743086 - 7743134
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||| |||| ||||| |||||||||| ||||| ||||    
T  7743086 aattttaattaagggatcaaagcgatactacctaaatagttaagggacc 7743134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 17273846 - 17273778
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaac 69  Q
    |||||||||||||||||| | ||||||||||   |||||||| ||||| |||| || ||||| ||||||    
T  17273846 atcgaattttaattaaggaatcaaaacgatacggcctaaatagttaagggaccaaaaatgcattttaac 17273778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 45171137 - 45171085
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||| ||||| | ||| |||||||||| ||||| ||||    
T  45171137 atcgaattttaattaaggggccaaagcaatactacctaaatagttaagggacc 45171085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 51885685 - 51885733
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||| |||||||||||||||||  |||||| ||||| ||||    
T  51885685 aattttaattaaaggaccaaaacgatattaattaaatagttaagggacc 51885733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4635 - 4701
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  4635 atcgaattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 4701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 4403 - 4338
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||| |||||||| ||||||  |||| |||||||||| ||||| |||| || |||||||||||||    
T  4403 aatttcaattaaggaaccaaagtgatagtacctaaatagttaagggaccaaaaatgcaatttaacc 4338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 11804 - 11883
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccattttcttat 80  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||| |||| || |||||||||| |||  |||||||    
T  11804 atcgaattttaattaaaggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaatttagccaaattcttat 11883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11557 - 11491
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| |  ||||||| ||||| |||| || ||||||||||    
T  11557 atcgaattttaattaagggaccaaagcgatactttctaaatagttaagggaccaaaaatgcaattta 11491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 13858 - 13928
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacca 71  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||| | |||| || || |||||||||||    
T  13858 atcgaattttaattaagggaccaaagcgatactacctaaatagttaggggaccaaaaatacaatttaacca 13928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 40669 - 40735
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| | ||| |||||||||| ||||| |||| || ||||||||||    
T  40669 atcgaattttaattaagggaccaaagcaatactacctaaatagttaagggaccaaaaatgcaattta 40735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 23472873 - 23472939
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||| | |||||||||| ||||| |||| || ||||||||||    
T  23472873 atcgaattttaattaagggaccaaagcgaaactacctaaatagttaagggaccaaaaatgcaattta 23472939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 31715942 - 31716004
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  31715942 aattttaattaagggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 31716004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35085808 - 35085742
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| |||||||| ||||| |||||||||| ||||| |||| || ||||||||||    
T  35085808 atcgaattttaattaaaggaccaaagcgatactacctaaatagttaagggaccaaaaatgcaattta 35085742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 8769347 - 8769282
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||||||| |||||||||||| ||| |||||||||| ||||| |||| || |||||||||||||    
T  8769347 aattttaattcagggaccaaaacaatactacctaaatagttaagggaccaaaaatgcaatttaacc 8769282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 37144084 - 37144149
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||||||||| ||  |||||| ||||| |||| || |||||||||||||    
T  37144084 aattttaattaagggaccaaaacgatactaattaaatagttaagggaccaaaaatgcaatttaacc 37144149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39118079 - 39118010
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    |||||| ||||||||||||| |||||||||| |||||||||| ||||| |||| || || ||||||||||    
T  39118079 atcgaaatttaattaagggatcaaaacgatactacctaaatagttaagggaccaaaaatacaatttaacc 39118010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 21522286 - 21522226
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaat 64  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||| |||| || |||||||    
T  21522286 gaattttaattaagggaccaaagcgatactacctaaataattaagggaccaaaaatgcaat 21522226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18731088 - 18731017
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccat 72  Q
    |||||||||||||||||||| |||| ||||| || ||||||| ||||| |||| || |||||||||| ||||    
T  18731088 atcgaattttaattaagggatcaaagcgatactatctaaatagttaagggaccaaaaatgcaatttagccat 18731017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23437221 - 23437174
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  23437221 atcgaattttaattaagggaccaaagcgatactacctaaatagttaag 23437174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 8769603 - 8769665
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||| |||  || ||||||||||    
T  8769603 aattttaattaagggaccaaagcgatactacctaaatagttaagggactaaaaatgcaattta 8769665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10625175 - 10625109
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| |||||||||||| |||||| |||||||||| ||||| |||| || ||| ||||||    
T  10625175 atcgaattttagttaagggaccaacacgatactacctaaatagttaagggaccaaaaatgtaattta 10625109  T

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Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10625401 - 10625467
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| |||| ||||||||| |||| |||||||||| ||||| |||| || ||||||||||    
T  10625401 atcgaattttagttaaaggaccaaaatgatactacctaaatagttaagggaccaaaaatgcaattta 10625467  T

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Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11678772 - 11678706
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||||||||||||  ||||||| ||||||| ||||  |||| || ||||||||||    
T  11678772 atcgaattttaattaagggaccaaagtgatattatctaaatatttaaaggaccaaaaatgcaattta 11678706  T

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Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 11679019 - 11679085
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||||||||| ||||| ||| |||||| ||||| |||| || || |||||||    
T  11679019 atcgaattttaattaagggaccaaagcgatactacttaaatagttaagggaccaaaaatacaattta 11679085  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23472662 - 23472596
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||  ||||||||||||| |||||||||| ||||| |||| || || |||||||    
T  23472662 atcgaattttaattaaaagaccaaaacgatactacctaaatagttaagggaccaaaaatacaattta 23472596  T

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Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 32706801 - 32706735
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||||||||||| | ||||| ||| |||||||||| ||||| |||| || ||||||||||    
T  32706801 atcgaattttaattaagggtcaaaaacaatactacctaaatagttaagggaccaaaaatgcaattta 32706735  T

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Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34568652 - 34568606
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaa 47  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||    
T  34568652 atcgaattttaattaagggaccaaagcgatactacctaaatagttaa 34568606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 43140763 - 43140693
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaaccatttt 75  Q
    ||||||||||||||||||||| ||||| || ||||||| ||||| |||  || ||||||||||||| ||||    
T  43140763 aattttaattaagggaccaaagcgatactatctaaatagttaagggactaaaaatgcaatttaaccttttt 43140693  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 47250863 - 47250929
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||||| ||||||||  |||| |||||||||| ||||| |||| || ||||||||||    
T  47250863 atcgaattttaattaaaggaccaaagtgatactacctaaatagttaagggaccaaaaatgcaattta 47250929  T

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Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 48704128 - 48704177
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||| ||||    
T  48704128 gaattttaattaagggaccaaagcgatactacctaaatagttaagggacc 48704177  T

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Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 47250623 - 47250579
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||    
T  47250623 gaattttaattaagggaccaaaatgatactacctaaataattaag 47250579  T

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Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31715702 - 31715651
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagac 52  Q
    |||||||||||||||||||  |||| ||||| |||||||||| |||||||||    
T  31715702 atcgaattttaattaaggggtcaaagcgatactacctaaatagttaagagac 31715651  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41758748 - 41758701
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    ||||||||||||||||||||||||||||||| ||  |||||| |||||    
T  41758748 atcgaattttaattaagggaccaaaacgatactatttaaatagttaag 41758701  T

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Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 473261 - 473195
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||||||| ||||||||||||| ||||| | |||||||| ||||| || | || ||||||||||    
T  473261 atcgaattttagttaagggaccaaagcgatactgcctaaatagttaagcgatcaaaaatgcaattta 473195  T

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Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 35086061 - 35086123
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    ||||||| ||||||||||||| ||||| |||||||||| ||||  |||| || ||||||||||    
T  35086061 aattttagttaagggaccaaagcgatactacctaaatagttaaaggaccaaaaatgcaattta 35086123  T

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Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 2357375 - 2357424
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    |||||||| ||||||| ||||||||||| |||||||||| ||||| ||||    
T  2357375 gaattttagttaagggcccaaaacgatactacctaaatagttaagggacc 2357424  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 21522537 - 21522602
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||||  |||||||||| ||||| |||| || |  ||||||||||    
T  21522537 aattttaattaagggaccaaagcgatgctacctaaatagttaagggaccaaaaacacaatttaacc 21522602  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 43726309 - 43726244
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaatttaacc 70  Q
    ||||||||||||||||||||| ||| | ||| |||||| ||||| |||| || || ||||||||||    
T  43726309 aattttaattaagggaccaaagcgagactacttaaataattaagggaccaaaaatacaatttaacc 43726244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 5238517 - 5238481
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaa 40  Q
    |||||||||||||||||||||| ||||| ||||||||    
T  5238517 gaattttaattaagggaccaaagcgatactacctaaa 5238481  T

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Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 9231002 - 9231034
Alignment:
Q  9 ttaattaagggaccaaaacgatattacctaaat 41  Q
    ||||||||||||||||||||||| |||||||||    
T  9231002 ttaattaagggaccaaaacgatactacctaaat 9231034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 36507130 - 36507178
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||| ||||| ||  |||||| ||||||||||    
T  36507130 aattttaattaagggaccaaatcgatactaattaaatagttaagagacc 36507178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 37143829 - 37143781
Alignment:
Q  5 aattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||||||||| ||  |||||| ||||| ||||    
T  37143829 aattttaattaagggaccaaaacgatactaattaaatagttaagggacc 37143781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 11534 - 11578
Alignment:
Q  4 gaattttaattaagggaccaaaacgatattacctaaatacttaag 48  Q
    |||||||||||||||||||||| ||||| |||||||||| |||||    
T  11534 gaattttaattaagggaccaaagcgatactacctaaatagttaag 11578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11282 - 11230
Alignment:
Q  1 atcgaattttaattaagggaccaaaacgatattacctaaatacttaagagacc 53  Q
    ||||||||||||||||||||| ||| | ||| |||||||||| ||||| ||||    
T  11282 atcgaattttaattaagggacgaaagcaatactacctaaatagttaagggacc 11230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 45159 - 45219
Alignment:
Q  7 ttttaattaagggaccaaaacgatattacctaaatacttaagagacctaatatgcaattta 67  Q
    |||||||||||||| |||| ||||| |||||||||| ||||| |||  || ||||||||||    
T  45159 ttttaattaagggagcaaagcgataatacctaaatagttaagggactaaaaatgcaattta 45219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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