View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19191_low_5 (Length: 340)

Name: NF19191_low_5
Description: NF19191
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19191_low_5
NF19191_low_5
[»] chr7 (6 HSPs)
chr7 (9-317)||(5182145-5182453)
chr7 (273-317)||(3772595-3772639)
chr7 (266-316)||(15893858-15893908)
chr7 (259-295)||(11766414-11766450)
chr7 (238-294)||(13784880-13784936)
chr7 (238-294)||(23902775-23902831)
[»] chr3 (5 HSPs)
chr3 (9-315)||(29429919-29430222)
chr3 (243-302)||(36501611-36501670)
chr3 (272-317)||(1489652-1489698)
chr3 (272-317)||(35419387-35419433)
chr3 (251-314)||(22476053-22476117)
[»] chr5 (4 HSPs)
chr5 (9-317)||(1897400-1897706)
chr5 (82-302)||(16914111-16914337)
chr5 (247-317)||(39933556-39933626)
chr5 (238-314)||(40269650-40269726)
[»] chr4 (2 HSPs)
chr4 (109-317)||(6050592-6050804)
chr4 (257-317)||(33352099-33352160)
[»] chr1 (4 HSPs)
chr1 (238-317)||(23347000-23347079)
chr1 (238-316)||(15248871-15248949)
chr1 (256-317)||(36681525-36681587)
chr1 (246-296)||(51184533-51184583)
[»] chr8 (2 HSPs)
chr8 (243-312)||(39921753-39921822)
chr8 (257-317)||(37550931-37550992)
[»] chr6 (1 HSPs)
chr6 (238-317)||(30373065-30373144)
[»] chr2 (2 HSPs)
chr2 (263-294)||(37488113-37488144)
chr2 (238-308)||(3769320-3769390)
[»] scaffold0045 (1 HSPs)
scaffold0045 (251-292)||(14819-14860)
[»] scaffold0025 (1 HSPs)
scaffold0025 (238-294)||(150368-150424)


Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 9 - 317
Target Start/End: Complemental strand, 5182453 - 5182145
Alignment:
9 gaaatgaagatagaaatgtgaaggttagaaagaatatatatttttaagtttcaatgaaccatcttctattgaatttctcaagaatttttccccaaagctt 108  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
5182453 gaaatgaagatagaaatgtgaaggttagaaagaatagatttttttaagtttcaatgaaccatcttctattgaatttctcaagaatttttccccaaagctt 5182354  T
109 aattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactaggagcactagaaataagagaagtggagaaagattcagaaata 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
5182353 aattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactaggagcactagaaataagagaagtggagaaagattcagaaata 5182254  T
209 tgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttga 308  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
5182253 tgagaccgcgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcacctcttacaataaaaactctctcatttga 5182154  T
309 tatgtcctc 317  Q
    |||||||||    
5182153 tatgtcctc 5182145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 3772639 - 3772595
Alignment:
273 cctctcatctctcacaataaaaactctctcatttgatatgtcctc 317  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||    
3772639 cctctcatctctcacaataaaaaacctctcatttgatatgccctc 3772595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 266 - 316
Target Start/End: Complemental strand, 15893908 - 15893858
Alignment:
266 atttagtcctctcatctctcacaataaaaactc-tctcatttgatatgtcct 316  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
15893908 atttaatcctctcatctctcacaat-aaaactcatctcatttgatatgtcct 15893858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 295
Target Start/End: Complemental strand, 11766450 - 11766414
Alignment:
259 ggttataatttagtcctctcatctctcacaataaaaa 295  Q
    ||||||| ||||||||||||| |||||||||||||||    
11766450 ggttatattttagtcctctcacctctcacaataaaaa 11766414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 13784880 - 13784936
Alignment:
238 aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaa 294  Q
    |||| |||| ||||||| || ||||||  |||| |||||||||||||||||||||||    
13784880 aaccgttaaaattgatccaaaggttatggtttaatcctctcatctctcacaataaaa 13784936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 23902831 - 23902775
Alignment:
238 aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaa 294  Q
    |||| |||| ||||||| || ||||||  |||| |||||||||||||||||||||||    
23902831 aaccgttaaaattgatccaaaggttatggtttaatcctctcatctctcacaataaaa 23902775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 9 - 315
Target Start/End: Complemental strand, 29430222 - 29429919
Alignment:
9 gaaatgaagatagaaatgtgaaggttagaaagaatatatatttttaagtttcaatgaaccatcttctattgaatttctcaagaatttttccccaaagctt 108  Q
    |||||||||||||||||||||||||| ||||||||| || |||||||||||| || ||||||||||||| |||||||||||||||| ||||||||| |||    
29430222 gaaatgaagatagaaatgtgaaggttcgaaagaatagatttttttaagtttcgataaaccatcttctatggaatttctcaagaattattccccaaaactt 29430123  T
109 aattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactaggagcactagaaataagagaagtggagaaagattcagaaata 208  Q
    |||| |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
29430122 aatttcatggatgtagaacctccactttgagttgtgacgtga---ggaaggagaactaggagcactggaaataagagaagtggagaaagattcagaaata 29430026  T
209 tgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttga 308  Q
    |||||||||  ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||    
29430025 tgagaccactagttcccaaatgtcatatgaaccattaagattgatctaatggttatagtttagtcctctcacctctcacaataaaaaccctctcatttga 29429926  T
309 tatgtcc 315  Q
    |||||||    
29429925 tatgtcc 29429919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 36501611 - 36501670
Alignment:
243 ttaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctc 302  Q
    |||||||||||| || |||| | | ||| ||||||||||||||||||||||||| |||||    
36501611 ttaagattgatccaagggttgtgacttaatcctctcatctctcacaataaaaaccctctc 36501670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 317
Target Start/End: Original strand, 1489652 - 1489698
Alignment:
272 tcctctcatctctcacaataaaaa-ctctctcatttgatatgtcctc 317  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||    
1489652 tcctctcatctctcacaataaaaagccctctcatttgatatgccctc 1489698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 317
Target Start/End: Complemental strand, 35419433 - 35419387
Alignment:
272 tcctctcatctctcacaataaaaa-ctctctcatttgatatgtcctc 317  Q
    |||||||||||||||||||||||| | |||||| |||||||||||||    
35419433 tcctctcatctctcacaataaaaagccctctcacttgatatgtcctc 35419387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 314
Target Start/End: Original strand, 22476053 - 22476117
Alignment:
251 gatctaatggttataatttagtcctctcatctctcacaataaaaact-ctctcatttgatatgtc 314  Q
    |||| ||||||||| ||| ||||||||||||||||| |||||  ||| ||||||||||| |||||    
22476053 gatccaatggttattattaagtcctctcatctctcataataatcactcctctcatttgaaatgtc 22476117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 9 - 317
Target Start/End: Original strand, 1897400 - 1897706
Alignment:
9 gaaatgaagatagaaatgtgaaggttagaaagaatatatatttttaagtttcaatgaaccatcttctattgaatttctcaagaatttttccccaaagctt 108  Q
    |||||||||||||||||||||||||| ||||||||| || ||||||| |||| ||| |||||||||||||||||||||||| |||||  |||||||||||    
1897400 gaaatgaagatagaaatgtgaaggttcgaaagaatagatttttttaaatttcgatgcaccatcttctattgaatttctcaaaaattt--ccccaaagctt 1897497  T
109 aattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactaggagcactagaaataagagaagtggagaaagattcagaaata 208  Q
    ||||  ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
1897498 aattttatggatgtagaacctccactttgagttatgacgtgatgaggaaggagaactaggagcaccggaaataagagaagtggagaaagattcagaaata 1897597  T
209 tgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttga 308  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |    
1897598 tgagaccatgggttcccaaatgtcatatcaaccattaagattgatctaatggttataatttagtcctctcacctcttacaataaaaaccctctcatttaa 1897697  T
309 tatgtcctc 317  Q
    |||||||||    
1897698 tatgtcctc 1897706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 82 - 302
Target Start/End: Original strand, 16914111 - 16914337
Alignment:
82 tttctcaagaatttttccccaaagcttaattccatggatgtagaacctccactttgagttgtgacgtgatgaggaaggagaactag-------gagcact 174  Q
    ||||| ||||||| ||||| |||| |||||| |||| |||||||||||||||| |||||||||| |||| || | || ||||||||       ||| |||    
16914111 tttctaaagaattcttccctaaagtttaatttcatgaatgtagaacctccactgtgagttgtgatgtgaggaaggag-agaactagaataaaggagaact 16914209  T
175 agaaataagagaagtggagaaagattcagaaatatgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcc 274  Q
     ||||||| | |||||||| | ||||||  ||| | ||| ||||||    |||||||||||| |||| ||||||||||||||||||||||||| ||   |    
16914210 ggaaataataaaagtggaggacgattcaagaatgtaagatcacgtgcatacaaatgtcatatgaacctttaagattgatctaatggttataatataactc 16914309  T
275 tctcatctctcacaataaaaactctctc 302  Q
    |||||||||||||||||||||| |||||    
16914310 tctcatctctcacaataaaaaccctctc 16914337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 317
Target Start/End: Original strand, 39933556 - 39933626
Alignment:
247 gattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtcctc 317  Q
    |||||||| || |||||| |||||  ||||| |||||||||||||||||| ||||||||| ||||| ||||    
39933556 gattgatccaagggttatgatttaaccctcttatctctcacaataaaaacactctcatttaatatgccctc 39933626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 40269650 - 40269726
Alignment:
238 aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtc 314  Q
    ||||||||| ||| ||| ||||||||||||| |  |||||||||||||  ||||| |   |||||||||||||||||    
40269650 aaccattaacattcatccaatggttataattaaaccctctcatctctcgtaataagactcctctcatttgatatgtc 40269726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 1e-47; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 109 - 317
Target Start/End: Original strand, 6050592 - 6050804
Alignment:
109 aattccatggatgtagaacc-tccactttgagttgtgacgtgatgaggaaggagaactagga----gcactagaaataagagaagtggagaaagattcag 203  Q
    |||| ||||||||||||||| ||||||||||||||||| |||| || | || |||||| | |    | ||| |||||| ||||||||||| | |||||||    
6050592 aatttcatggatgtagaaccctccactttgagttgtgatgtgaggaaggag-agaactggaatacagaactggaaatatgagaagtggaggacgattcag 6050690  T
204 aaatatgagaccacgtgttcccaaatgtcatattaaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctca 303  Q
     | | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||    
6050691 tagtgtgagaccacgtgttcacaaatgtcatatgaaccattaagattgatctaatggttataatttagtcctctcatctcttaccataaaaatcctctca 6050790  T
304 tttgatatgtcctc 317  Q
    ||||||||||||||    
6050791 tttgatatgtcctc 6050804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 33352099 - 33352160
Alignment:
257 atggttataatttagtcctctcatctctcacaataaaaactc-tctcatttgatatgtcctc 317  Q
    |||||||| | ||| |||||||||||||||| |||| ||||| ||||| |||||||||||||    
33352099 atggttattaattactcctctcatctctcactataacaactcatctcacttgatatgtcctc 33352160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 238 - 317
Target Start/End: Complemental strand, 23347079 - 23347000
Alignment:
238 aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtcctc 317  Q
    |||| |||| ||||||  || ||||||||||||  |||||||||||| | |||||||| ||||||| |||||||||||||    
23347079 aaccgttaatattgattcaagggttataatttaaccctctcatctcttataataaaaaatctctcacttgatatgtcctc 23347000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 316
Target Start/End: Complemental strand, 15248949 - 15248871
Alignment:
238 aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtcct 316  Q
    ||||||||| ||| ||| || |||||| |||||  |||||||||||||||  ||||| | |||||| ||||||||||||    
15248949 aaccattaatattaatccaagggttatgatttaaccctctcatctctcactgtaaaagccctctcacttgatatgtcct 15248871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 317
Target Start/End: Complemental strand, 36681587 - 36681525
Alignment:
256 aatggttataatttagtcctctcatctctcacaataaaaact-ctctcatttgatatgtcctc 317  Q
    ||||||||| | ||| |||||||||||||||| |||| |||| |||||| |||||||||||||    
36681587 aatggttattaattactcctctcatctctcactataacaactcctctcacttgatatgtcctc 36681525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 51184583 - 51184533
Alignment:
246 agattgatctaatggttataatttagtcctctcatctctcacaataaaaac 296  Q
    |||| |||| || ||||||||||||  ||||||||||||||||||||||||    
51184583 agatcgatccaaaggttataatttaaccctctcatctctcacaataaaaac 51184533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 243 - 312
Target Start/End: Original strand, 39921753 - 39921822
Alignment:
243 ttaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatg 312  Q
    |||| ||| |||||| ||| ||||||||||||||||||||||| ||||||||   |||| ||||||||||    
39921753 ttaatattaatctaaaggtcataatttagtcctctcatctctcgcaataaaagtcctcttatttgatatg 39921822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 317
Target Start/End: Original strand, 37550931 - 37550992
Alignment:
257 atggttataatttagtcctctcatctctcacaataaaaact-ctctcatttgatatgtcctc 317  Q
    |||||||| | ||| |||||||||||||||| |||| |||| |||||| |||||||||||||    
37550931 atggttattaattactcctctcatctctcactataacaactcctctcacttgatatgtcctc 37550992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 238 - 317
Target Start/End: Original strand, 30373065 - 30373144
Alignment:
238 aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttgatatgtcctc 317  Q
    |||| |||||||||||| || |||| |||||||   ||||||||||||| ||||||||| |||||| |||| ||| ||||    
30373065 aaccgttaagattgatccaagggttgtaatttaacactctcatctctcataataaaaaccctctcacttgaaatgccctc 30373144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 263 - 294
Target Start/End: Complemental strand, 37488144 - 37488113
Alignment:
263 ataatttagtcctctcatctctcacaataaaa 294  Q
    ||||||||||||||||||||||||||||||||    
37488144 ataatttagtcctctcatctctcacaataaaa 37488113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 238 - 308
Target Start/End: Original strand, 3769320 - 3769390
Alignment:
238 aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaaactctctcatttga 308  Q
    |||| |||||||||||| || |||| ||| |||   ||||||||||||||||||||||| |||||| ||||    
3769320 aaccgttaagattgatccaagggttgtaacttaacactctcatctctcacaataaaaaccctctcacttga 3769390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Complemental strand, 14860 - 14819
Alignment:
251 gatctaatggttataatttagtcctctcatctctcacaataa 292  Q
    |||||||||||||| ||| ||||||||||||||||| |||||    
14860 gatctaatggttattattaagtcctctcatctctcataataa 14819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 150424 - 150368
Alignment:
238 aaccattaagattgatctaatggttataatttagtcctctcatctctcacaataaaa 294  Q
    |||| |||||||||||| || ||||||  ||||  ||||||||||||||||||||||    
150424 aaccgttaagattgatcgaagggttatggtttaaccctctcatctctcacaataaaa 150368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University