View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19192_high_103 (Length: 249)
Name: NF19192_high_103
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19192_high_103 |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 30668003 - 30668240
Alignment:
| Q |
1 |
aagccagctcaagagttgtcacagttgaacaatgctctcttggcctggcatcggcaaattttgggggatccaaactaactgatttcaaatgatcaaataa |
100 |
Q |
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| T |
30668003 |
aagccagcttaagagttgtcatggttgaacaatgctctcttggcttggcatcggctaattttgggggatccaaactaactgatttcaaatgatcaaatga |
30668102 |
T |
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| Q |
101 |
cgtgttaatgtgttattgtcatcgttacaaaaggcctaagaatgctgcaagttaattaggaaaatagcattgcatggttagatatatttggctggttatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30668103 |
cgtgttaatgtgttattgtcatcgttacaaaaggcctaagaatgctgcaagttaattaggaaaatagcattgcatggttagatatatttggctggttatt |
30668202 |
T |
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| Q |
201 |
gtaaaattcgtctctttctgagtttctgtttggttctgtg |
240 |
Q |
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|||||||||| ||||||||||||||||||||||| |||| |
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| T |
30668203 |
gtaaaattcg--tctttctgagtttctgtttggttttgtg |
30668240 |
T |
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