View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19192_high_12 (Length: 654)

Name: NF19192_high_12
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19192_high_12
NF19192_high_12
[»] chr4 (26 HSPs)
chr4 (15-140)||(39292080-39292209)
chr4 (553-654)||(39292503-39292604)
chr4 (580-653)||(39235421-39235494)
chr4 (592-654)||(39047760-39047822)
chr4 (580-653)||(39053763-39053836)
chr4 (244-305)||(36203229-36203290)
chr4 (383-427)||(37175798-37175842)
chr4 (383-427)||(39292309-39292353)
chr4 (244-295)||(20096287-20096338)
chr4 (245-295)||(13121538-13121588)
chr4 (242-300)||(13276120-13276178)
chr4 (256-294)||(18541506-18541544)
chr4 (245-295)||(18635524-18635574)
chr4 (244-290)||(22164291-22164337)
chr4 (244-290)||(29737666-29737712)
chr4 (245-287)||(33024150-33024192)
chr4 (244-290)||(43722758-43722804)
chr4 (242-299)||(8494978-8495035)
chr4 (242-307)||(11286786-11286851)
chr4 (250-295)||(38374956-38375001)
chr4 (242-299)||(38812862-38812919)
chr4 (250-294)||(6460096-6460140)
chr4 (243-295)||(7248328-7248380)
chr4 (242-290)||(21465602-21465650)
chr4 (243-295)||(30051884-30051936)
chr4 (244-300)||(36490561-36490617)
[»] chr7 (22 HSPs)
chr7 (580-653)||(7562764-7562837)
chr7 (244-307)||(964746-964809)
chr7 (249-300)||(1285081-1285132)
chr7 (242-307)||(3584195-3584260)
chr7 (241-290)||(22267571-22267620)
chr7 (384-429)||(24934749-24934794)
chr7 (248-296)||(3948051-3948099)
chr7 (243-295)||(35222916-35222968)
chr7 (244-300)||(42829246-42829302)
chr7 (242-285)||(20762831-20762874)
chr7 (244-295)||(30857241-30857292)
chr7 (244-306)||(1399155-1399217)
chr7 (264-298)||(28479870-28479904)
chr7 (245-306)||(5352323-5352384)
chr7 (264-301)||(37307885-37307922)
chr7 (243-307)||(8237637-8237701)
chr7 (246-298)||(9819563-9819615)
chr7 (246-298)||(10721488-10721540)
chr7 (244-300)||(19599138-19599194)
chr7 (250-290)||(29461843-29461883)
chr7 (246-302)||(41527555-41527611)
chr7 (243-295)||(43681007-43681059)
[»] chr1 (26 HSPs)
chr1 (243-290)||(22388197-22388244)
chr1 (243-290)||(41573291-41573338)
chr1 (243-302)||(43840335-43840394)
chr1 (244-294)||(41998344-41998394)
chr1 (245-298)||(2884462-2884515)
chr1 (242-294)||(18091194-18091247)
chr1 (245-306)||(27853349-27853410)
chr1 (246-295)||(44220982-44221031)
chr1 (251-307)||(49868011-49868067)
chr1 (244-307)||(7732415-7732478)
chr1 (244-295)||(16033467-16033518)
chr1 (243-290)||(29701342-29701389)
chr1 (248-295)||(41974758-41974805)
chr1 (244-290)||(30678835-30678881)
chr1 (243-301)||(41032923-41032981)
chr1 (245-295)||(44641521-44641571)
chr1 (249-290)||(9116894-9116935)
chr1 (242-307)||(11014223-11014288)
chr1 (246-307)||(23772282-23772343)
chr1 (274-307)||(27687617-27687650)
chr1 (243-300)||(41973247-41973304)
chr1 (250-290)||(10292935-10292975)
chr1 (246-294)||(18398633-18398681)
chr1 (242-290)||(29935974-29936022)
chr1 (243-295)||(36467042-36467094)
chr1 (242-290)||(44365970-44366018)
[»] chr2 (32 HSPs)
chr2 (242-300)||(11931596-11931654)
chr2 (244-295)||(29896311-29896362)
chr2 (248-298)||(1238159-1238209)
chr2 (242-295)||(3197096-3197149)
chr2 (253-290)||(3904204-3904241)
chr2 (242-290)||(28277698-28277746)
chr2 (242-298)||(45032684-45032740)
chr2 (242-289)||(6238587-6238634)
chr2 (264-307)||(7262819-7262862)
chr2 (244-295)||(27244650-27244701)
chr2 (248-295)||(34364512-34364559)
chr2 (264-307)||(37830726-37830769)
chr2 (245-295)||(6723094-6723144)
chr2 (246-300)||(7537105-7537159)
chr2 (242-300)||(9517021-9517079)
chr2 (397-431)||(17897868-17897902)
chr2 (245-291)||(43356654-43356700)
chr2 (249-294)||(13922650-13922695)
chr2 (270-307)||(30045472-30045509)
chr2 (270-307)||(30050635-30050672)
chr2 (270-307)||(30141679-30141716)
chr2 (249-298)||(30929059-30929108)
chr2 (394-431)||(39955494-39955531)
chr2 (242-302)||(7206116-7206176)
chr2 (257-293)||(11265143-11265179)
chr2 (243-295)||(27935048-27935100)
chr2 (264-300)||(30089062-30089098)
chr2 (264-300)||(30125666-30125702)
chr2 (248-300)||(31815899-31815951)
chr2 (244-300)||(32986005-32986061)
chr2 (244-300)||(33063979-33064035)
chr2 (264-300)||(39068720-39068756)
[»] chr8 (24 HSPs)
chr8 (242-295)||(7553670-7553723)
chr8 (384-431)||(3036534-3036581)
chr8 (264-307)||(24696011-24696054)
chr8 (242-300)||(26886054-26886112)
chr8 (244-300)||(8837913-8837969)
chr8 (244-295)||(6109162-6109213)
chr8 (245-300)||(6447183-6447238)
chr8 (243-302)||(13575281-13575340)
chr8 (248-295)||(33482166-33482213)
chr8 (244-298)||(8687859-8687913)
chr8 (245-294)||(8982561-8982610)
chr8 (250-307)||(10601762-10601819)
chr8 (242-295)||(14303156-14303209)
chr8 (245-290)||(32223901-32223946)
chr8 (242-295)||(33620889-33620942)
chr8 (242-290)||(1230683-1230731)
chr8 (242-290)||(1243763-1243811)
chr8 (242-290)||(1254463-1254511)
chr8 (252-300)||(7968952-7969000)
chr8 (245-301)||(11708980-11709036)
chr8 (267-295)||(12938944-12938972)
chr8 (264-300)||(22948093-22948129)
chr8 (243-295)||(32555246-32555298)
chr8 (243-295)||(33445562-33445614)
[»] chr6 (17 HSPs)
chr6 (264-307)||(2692228-2692271)
chr6 (245-289)||(7927694-7927738)
chr6 (383-431)||(28478663-28478711)
chr6 (383-431)||(29791118-29791166)
chr6 (244-295)||(12412270-12412321)
chr6 (245-307)||(8809300-8809362)
chr6 (245-291)||(12336347-12336393)
chr6 (245-287)||(21884981-21885023)
chr6 (244-297)||(2445292-2445345)
chr6 (244-297)||(3373396-3373449)
chr6 (242-307)||(31971520-31971585)
chr6 (244-288)||(11520583-11520627)
chr6 (247-295)||(14552333-14552381)
chr6 (243-295)||(15291707-15291759)
chr6 (243-295)||(24373727-24373779)
chr6 (264-300)||(28231437-28231473)
chr6 (383-430)||(29694677-29694722)
[»] chr5 (20 HSPs)
chr5 (244-295)||(40445976-40446027)
chr5 (242-307)||(1082224-1082289)
chr5 (240-300)||(8545001-8545061)
chr5 (242-290)||(10531531-10531579)
chr5 (248-302)||(17046331-17046385)
chr5 (244-290)||(28447486-28447532)
chr5 (237-295)||(34436837-34436895)
chr5 (245-290)||(4432110-4432155)
chr5 (262-295)||(7861018-7861051)
chr5 (242-307)||(8885246-8885311)
chr5 (245-294)||(42663222-42663271)
chr5 (383-427)||(2523798-2523842)
chr5 (250-290)||(2642785-2642825)
chr5 (249-297)||(6237734-6237782)
chr5 (243-295)||(10515545-10515597)
chr5 (274-306)||(13484542-13484574)
chr5 (257-297)||(14124307-14124347)
chr5 (250-294)||(14869991-14870035)
chr5 (246-290)||(17861974-17862018)
chr5 (383-427)||(34903400-34903444)
[»] chr3 (24 HSPs)
chr3 (243-290)||(7827500-7827547)
chr3 (243-290)||(7829888-7829935)
chr3 (244-295)||(32753821-32753872)
chr3 (239-294)||(48924337-48924392)
chr3 (249-295)||(48517669-48517715)
chr3 (250-295)||(12976619-12976664)
chr3 (243-295)||(28093346-28093398)
chr3 (242-300)||(7738660-7738718)
chr3 (250-300)||(10922320-10922370)
chr3 (252-302)||(39869817-39869867)
chr3 (246-300)||(46226089-46226143)
chr3 (245-290)||(7464513-7464558)
chr3 (246-295)||(8139710-8139759)
chr3 (242-307)||(9598430-9598495)
chr3 (241-290)||(22462302-22462351)
chr3 (241-290)||(23332640-23332689)
chr3 (242-295)||(28052399-28052452)
chr3 (394-431)||(31110632-31110669)
chr3 (245-298)||(38387966-38388019)
chr3 (243-295)||(7824799-7824851)
chr3 (264-300)||(24145411-24145447)
chr3 (250-298)||(35126283-35126331)
chr3 (246-290)||(37921020-37921064)
chr3 (243-295)||(41168155-41168207)
[»] scaffold0160 (1 HSPs)
scaffold0160 (244-307)||(22904-22967)
[»] scaffold0143 (1 HSPs)
scaffold0143 (248-295)||(4463-4510)
[»] scaffold0016 (1 HSPs)
scaffold0016 (245-295)||(99031-99081)
[»] scaffold0045 (2 HSPs)
scaffold0045 (245-294)||(63856-63905)
scaffold0045 (245-294)||(71188-71237)
[»] scaffold0086 (1 HSPs)
scaffold0086 (243-295)||(1599-1651)
[»] scaffold0038 (1 HSPs)
scaffold0038 (264-300)||(31934-31970)
[»] scaffold0008 (1 HSPs)
scaffold0008 (244-288)||(119562-119606)


Alignment Details
Target: chr4 (Bit Score: 105; Significance: 4e-52; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 15 - 140
Target Start/End: Original strand, 39292080 - 39292209
Alignment:
Q  15 tcatcaccgggtgtagccatcatatacctgttttacaacatcaatcgtgtatgtc----attaattaattaatacatctttatgtgtaaactttcaagat 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||| |||||    
T  39292080 tcatcaccgggtgtagccatcatatacctgttttacaacatcaatcgtgtatgtcattaattaattaattaatacatctttatgtgtaaactttgaagat 39292179  T
Q  111 ttgagtaattgagattcatttaaaacatta 140  Q
     |||||||||||||||||||||||||||||    
T  39292180 atgagtaattgagattcatttaaaacatta 39292209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 553 - 654
Target Start/End: Original strand, 39292503 - 39292604
Alignment:
Q  553 tctacggtcttacttagggtgtgttagtgtcatctccctaagctccttcaagcatgggtgttctcttggaaacacgcttgtttcaagtatatactgcaca 652  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39292503 tctacggtcttacttagggtgtgttagtgtcatctccctaagctccttcaagcatgggtgttctcttggaaacacgcttgtttcaagtatatactgcaca 39292602  T
Q  653 at 654  Q
    ||    
T  39292603 at 39292604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 580 - 653
Target Start/End: Complemental strand, 39235494 - 39235421
Alignment:
Q  580 tgtcatctccctaagctccttcaagcatgggtgttctcttggaaacacgcttgtttcaagtatatactgcacaa 653  Q
    ||||||||| |  |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||    
T  39235494 tgtcatctcacggagctccttcaagcaagggtgttctcttggaaacacacttgtgtcaagtatatactgcacaa 39235421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 592 - 654
Target Start/End: Complemental strand, 39047822 - 39047760
Alignment:
Q  592 aagctccttcaagcatgggtgttctcttggaaacacgcttgtttcaagtatatactgcacaat 654  Q
    ||||||||||||||||||||| |||||||||||||| || || ||||||||||||||||||||    
T  39047822 aagctccttcaagcatgggtgctctcttggaaacacactggtctcaagtatatactgcacaat 39047760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 580 - 653
Target Start/End: Complemental strand, 39053836 - 39053763
Alignment:
Q  580 tgtcatctccctaagctccttcaagcatgggtgttctcttggaaacacgcttgtttcaagtatatactgcacaa 653  Q
    ||||||||| | ||||||||||||||| ||||||||  |||||||||| ||||| |||||||||||||||||||    
T  39053836 tgtcatctcacgaagctccttcaagcaagggtgttcatttggaaacacacttgtgtcaagtatatactgcacaa 39053763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 36203229 - 36203290
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagatt 305  Q
    |||||||||||| |||  | |||||||| |||||||||||||||||| |||| |||||||||    
T  36203229 tgtcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaaggtccgagatt 36203290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 37175842 - 37175798
Alignment:
Q  383 cttaaagtagcaactttatcttaaaaattatgcattcaacatatt 427  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||    
T  37175842 cttaaagtagcaactttatcttggaaattatgcattcaacttatt 37175798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 39292309 - 39292353
Alignment:
Q  383 cttaaagtagcaactttatcttaaaaattatgcattcaacatatt 427  Q
    ||||||||||||||||||||||  |||||||||||||||| ||||    
T  39292309 cttaaagtagcaactttatcttggaaattatgcattcaacttatt 39292353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 20096338 - 20096287
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||| | ||||| |||||| |||||||||||||| ||||    
T  20096338 tgtcctcgtgagtttaactcagttggtagggataatgcataatatatgcaag 20096287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 13121538 - 13121588
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||| |||  ||||||| ||||||||||||||||||||| ||||    
T  13121538 gtcctcgtgagcttagcttagttggtagggacaatgcataatatatgcaag 13121588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 13276120 - 13276178
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||||| |||| | | ||| ||||||||||||||||||||| |||| ||||    
T  13276120 tttgtcctcgtgagcttaactcaattggtagggacaatgcataatatatgcaaggtccg 13276178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 256 - 294
Target Start/End: Original strand, 18541506 - 18541544
Alignment:
Q  256 tttaatttagttgatagggacaatgcataatatatacaa 294  Q
    |||||||||||||||||  ||||||||||||||||||||    
T  18541506 tttaatttagttgatagaaacaatgcataatatatacaa 18541544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 18635524 - 18635574
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||| |||||| |||| | |||||||| |||||||||||||||||||||||    
T  18635524 gtccccgtgagcttaactcagttgataaggacaatgcataatatatacaag 18635574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 22164337 - 22164291
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||||  ||||||| |||| ||||||||||||||||    
T  22164337 tgtcctcgtgagtttagcttagttggtaggaacaatgcataatatat 22164291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 29737666 - 29737712
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||| ||||| |||||||||||| |||| ||||||||||||||||    
T  29737666 tgtccttgtgagcttaatttagttgctaggaacaatgcataatatat 29737712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 33024150 - 33024192
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataata 287  Q
    |||||||||||||||| ||||||| || |||||||||||||||    
T  33024150 gtcctcgtgagtttaacttagttggtatggacaatgcataata 33024192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 43722758 - 43722804
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||||| | ||||| || ||||||||||||||||||    
T  43722758 tgtcctcgtgagtttaactcagttggtatggacaatgcataatatat 43722804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 299
Target Start/End: Original strand, 8494978 - 8495035
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatcc 299  Q
    |||||||||||||  |||  | ||||| ||||||||||||||||||||| ||||||||    
T  8494978 tttgtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaagatcc 8495035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 11286851 - 11286786
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||||||| |||| ||| || ||||| ||| ||||||||||||||||| |||| || ||||||||    
T  11286851 tttgtcctcctgagcttagttcagttggtagagacaatgcataatatatgcaaggtctgagattca 11286786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 295
Target Start/End: Original strand, 38374956 - 38375001
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||| |||| ||||||| ||||||||||||||||||||| ||||    
T  38374956 cgtgagcttaacttagttggtagggacaatgcataatatatgcaag 38375001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 38812919 - 38812862
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatcc 299  Q
    ||||| ||||||||||||  | ||| | ||||||||||||||||||||| ||||||||    
T  38812919 tttgttctcgtgagtttagctcagtcggtagggacaatgcataatatatgcaagatcc 38812862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 294
Target Start/End: Complemental strand, 6460140 - 6460096
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    ||||||||||| | |||| |||| |||||||||||||||||||||    
T  6460140 cgtgagtttaactcagttaatagagacaatgcataatatatacaa 6460096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 7248328 - 7248380
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||| |||||||||||| | ||||||| |||||||||||||| |||| ||||    
T  7248328 ttgtcatcgtgagtttaactcagttgattgggacaatgcataaaatatgcaag 7248380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 21465602 - 21465650
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||||||| | ||||  || ||||||||||||||||||    
T  21465602 tttgtcctcgtgagtttaactcagttagtaaggacaatgcataatatat 21465650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 30051936 - 30051884
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||| ||| || ||||| || |||||||||||||||||| ||||    
T  30051936 ttgtcctcgtgagcttagttcagttgttatggacaatgcataatatatgcaag 30051884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 36490561 - 36490617
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||| ||||||| |||| ||||||| || |||||||||||||| ||| |||||||||    
T  36490561 tgtcatcgtgagcttaacttagttggtatggacaatgcataatgtatgcaagatccg 36490617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 3e-19; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 580 - 653
Target Start/End: Complemental strand, 7562837 - 7562764
Alignment:
Q  580 tgtcatctccctaagctccttcaagcatgggtgttctcttggaaacacgcttgtttcaagtatatactgcacaa 653  Q
    ||||||||| |  |||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||    
T  7562837 tgtcatctcacggagctccttcaagcaagggtgttctcttggaaacacacttgtgtcaagtatatactgcacaa 7562764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 307
Target Start/End: Complemental strand, 964809 - 964746
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||||| |||| | ||| |||||  ||||||||||||||||| |||||||||||||||    
T  964809 tgtcctcgtgagcttaactcagtcgatagaaacaatgcataatatatataagatccgagattca 964746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 1285132 - 1285081
Alignment:
Q  249 tcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||| | |||||||||| |||||||||||||||| |||||||||    
T  1285132 tcgtgagtttaactcagttgataggaacaatgcataatatatgcaagatccg 1285081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 3584195 - 3584260
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||| ||| |||| ||||||| || |||||||||||||||||| |||| | |||||||||    
T  3584195 tttgtcctcgcgagcttaacttagttggtaaggacaatgcataatatatgcaaggtacgagattca 3584260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 22267571 - 22267620
Alignment:
Q  241 ctttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||||||||||||| | ||||| ||| |||||||||||||||||    
T  22267571 ctttgtcctcgtgagtttaactcagttggtagagacaatgcataatatat 22267620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 384 - 429
Target Start/End: Original strand, 24934749 - 24934794
Alignment:
Q  384 ttaaagtagcaactttatcttaaaaattatgcattcaacatattaa 429  Q
    |||||||||||||||||||||| ||||| |||||||||| ||||||    
T  24934749 ttaaagtagcaactttatcttagaaattgtgcattcaacttattaa 24934794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 3948051 - 3948099
Alignment:
Q  248 ctcgtgagtttaatttagttgatagggacaatgcataatatatacaaga 296  Q
    ||||||||||||| | ||||||||| ||||||||||||||||| |||||    
T  3948051 ctcgtgagtttaactcagttgatagagacaatgcataatatatgcaaga 3948099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 35222916 - 35222968
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||||||||  | |||||||||||||||||||| |||||| ||||    
T  35222916 ttgtcctcgtgagtttaggtcagttgatagggacaatgcatgatatatgcaag 35222968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 42829302 - 42829246
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||| || | | ||||||||||||||||||||||||||| |||| ||||    
T  42829302 tgtcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaagctccg 42829246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 20762831 - 20762874
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataa 285  Q
    |||||||||||||||||| || |||||||||| |||||||||||    
T  20762831 tttgtcctcgtgagtttagttcagttgataggaacaatgcataa 20762874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 30857241 - 30857292
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||  ||||||| || |||||||||||||||||| ||||    
T  30857241 tgtcctcgtgagtttagcttagttggtatggacaatgcataatatatgcaag 30857292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 306
Target Start/End: Original strand, 1399155 - 1399217
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattc 306  Q
    ||||||||||||||||| | ||||| || ||||||||||| |||||| |||| || |||||||    
T  1399155 tgtcctcgtgagtttaactcagttggtatggacaatgcatgatatatgcaaggtctgagattc 1399217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 298
Target Start/End: Complemental strand, 28479904 - 28479870
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatc 298  Q
    |||||||| ||||||||||||||||||||||||||    
T  28479904 agttgataaggacaatgcataatatatacaagatc 28479870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 5352323 - 5352384
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattc 306  Q
    ||||||||||| |||  | ||||| || ||||||| ||||||||||||||| ||||||||||    
T  5352323 gtcctcgtgagcttagctcagttggtaaggacaatacataatatatacaaggtccgagattc 5352384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 301
Target Start/End: Complemental strand, 37307922 - 37307885
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccga 301  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  37307922 agttgataggaacaatgcataatatatgcaagatccga 37307885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 8237701 - 8237637
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||||||||||| ||| ||  |||| || ||||||||||||||||||||||  |||||| ||||    
T  8237701 ttgtcctcgtgagcttagttctgttggtaaggacaatgcataatatatacaaagtccgaggttca 8237637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 9819615 - 9819563
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    ||||||||||||||  | ||||| |||| |||||||||||||||| |||||||    
T  9819615 tcctcgtgagtttatctcagttggtaggaacaatgcataatatatgcaagatc 9819563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 298
Target Start/End: Complemental strand, 10721540 - 10721488
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    ||||||||||||||  | ||||| |||| |||||||||||||||| |||||||    
T  10721540 tcctcgtgagtttatctcagttggtaggaacaatgcataatatatgcaagatc 10721488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 19599138 - 19599194
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||| |||||||||| | ||||| || |||||||||||||||||| |||| ||||    
T  19599138 tgtcctggtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccg 19599194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 29461883 - 29461843
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||| | ||||| |||||||||||||||||||||    
T  29461883 cgtgagtttaactcagttggtagggacaatgcataatatat 29461843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 302
Target Start/End: Original strand, 41527555 - 41527611
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgag 302  Q
    |||||||||| |||  ||||||| || |||||||||||||||||| |||| ||||||    
T  41527555 tcctcgtgagcttagcttagttggtatggacaatgcataatatatgcaaggtccgag 41527611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 43681059 - 43681007
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||| |||||||||||| | ||||||| |||||||||||||| |||| ||||    
T  43681059 ttgtcatcgtgagtttaactcagttgattgggacaatgcataaaatatgcaag 43681007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 22388244 - 22388197
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  22388244 ttgtcctcgtaagtttaacttagttgatagggacaatgcataatatat 22388197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 41573338 - 41573291
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||||||||||| | ||||| |||||||||||||||||||||    
T  41573338 ttgtcctcgtgagtttaactcagttggtagggacaatgcataatatat 41573291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 302
Target Start/End: Complemental strand, 43840394 - 43840335
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgag 302  Q
    |||||||||||||||||| | |||||||| ||||||||||||| ||||  ||||||||||    
T  43840394 ttgtcctcgtgagtttaactcagttgatatggacaatgcataaaatatgtaagatccgag 43840335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 244 - 294
Target Start/End: Original strand, 41998344 - 41998394
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    |||||||||||| |||| | |||||||||||||||| ||||||||||||||    
T  41998344 tgtcctcgtgagattaactcagttgatagggacaattcataatatatacaa 41998394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 298
Target Start/End: Complemental strand, 2884515 - 2884462
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    ||||||||||  |||| | |||||||| ||||||||||||||||||||||||||    
T  2884515 gtcctcgtgaccttaactcagttgatatggacaatgcataatatatacaagatc 2884462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 18091194 - 18091247
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcat-aatatatacaa 294  Q
    |||||||||||||| |||| | |||||||||||||||||||| |||||||||||    
T  18091194 tttgtcctcgtgagcttaactcagttgatagggacaatgcataaatatatacaa 18091247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 27853349 - 27853410
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattc 306  Q
    ||||||||||| |||| | ||||| || | |||||||||||||||||||||||||| |||||    
T  27853349 gtcctcgtgagcttaactcagttggtatgaacaatgcataatatatacaagatccgggattc 27853410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 44220982 - 44221031
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||| |||| ||||||||||| ||||||||| ||||||||||||    
T  44220982 tcctcgtgagcttaacttagttgatagagacaatgcacaatatatacaag 44221031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 307
Target Start/End: Original strand, 49868011 - 49868067
Alignment:
Q  251 gtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||| | |||||||| ||| |||||||||||||| |||| |||||||||||    
T  49868011 gtgagtttaactcagttgatatggataatgcataatatatgcaaggtccgagattca 49868067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 7732415 - 7732478
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||||||||||||||  | |||||||  ||| |||||||||||||| ||||||||| ||||||    
T  7732415 tgtcctcgtgagtttagctcagttgatttggataatgcataatatatccaagatccgggattca 7732478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 16033518 - 16033467
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||| || | | ||||||||||||||||||||||||||| ||||    
T  16033518 tgtcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaag 16033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 290
Target Start/End: Complemental strand, 29701389 - 29701342
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||| ||||||| |||| |||||||||| ||||||||||||||||||    
T  29701389 ttgtcttcgtgagcttaacttagttgatatggacaatgcataatatat 29701342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 41974758 - 41974805
Alignment:
Q  248 ctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||| || |||||||||||| |||||||||||||| ||||    
T  41974758 ctcgtgagtttagttcagttgatagggataatgcataatatatgcaag 41974805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 290
Target Start/End: Complemental strand, 30678881 - 30678835
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||||| |||| | ||||| |||||||||||||||||||||    
T  30678881 tgtcctcgtgagcttaactcagttggtagggacaatgcataatatat 30678835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 243 - 301
Target Start/End: Original strand, 41032923 - 41032981
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccga 301  Q
    ||||||||||||| |||| | |||||||| | ||||||||||| ||||||||| |||||    
T  41032923 ttgtcctcgtgagcttaactcagttgatatgaacaatgcataaaatatacaaggtccga 41032981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 44641521 - 44641571
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||||||  | |||||||| |||||||||||||||||| ||||    
T  44641521 gtcctcgtgagtttagctcagttgatatggacaatgcataatatatgcaag 44641571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 290
Target Start/End: Complemental strand, 9116935 - 9116894
Alignment:
Q  249 tcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||||| | |||||||| ||||||||||||||||||    
T  9116935 tcgtgagtttaactcagttgatatggacaatgcataatatat 9116894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 11014223 - 11014288
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||||||||||||||||  | ||||| ||| |||| |||||||||||| |||||| || ||||||    
T  11014223 tttgtcctcgtgagtttagctcagttggtagagacagtgcataatatatgcaagattcgggattca 11014288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 307
Target Start/End: Complemental strand, 23772343 - 23772282
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||||||| |||| || ||||  |||| |||||| ||||||||||||||||| ||||||||    
T  23772343 tcctcgtgaatttagttcagtttgtaggaacaatgtataatatatacaagatctgagattca 23772282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 307
Target Start/End: Complemental strand, 27687650 - 27687617
Alignment:
Q  274 gacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||||||||||||||||| |||||||||    
T  27687650 gacaatgcataatatatacaagatacgagattca 27687617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 300
Target Start/End: Original strand, 41973247 - 41973304
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||||| ||| |||| ||| ||| ||||||||||||||||||||| |||| ||||    
T  41973247 ttgtcctcgcgagcttaacttaattggtagggacaatgcataatatatgcaaggtccg 41973304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Original strand, 10292935 - 10292975
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||| |||| | |||||||||||||||||||||||||||    
T  10292935 cgtgagcttaactcagttgatagggacaatgcataatatat 10292975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 18398633 - 18398681
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    ||||||||||||||||| ||||| || ||||||| ||||||||| ||||    
T  18398633 tcctcgtgagtttaattcagttggtaaggacaatacataatatagacaa 18398681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 29935974 - 29936022
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||| |||||||||| | ||||| || ||||||||||||||||||    
T  29935974 tttgtccttgtgagtttaactcagttggtatggacaatgcataatatat 29936022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 36467094 - 36467042
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||| ||||| |||||| | |||||| |||||||||||||||||| ||||    
T  36467094 ttgtccttgtgagcttaattcaattgatatggacaatgcataatatatgcaag 36467042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 44366018 - 44365970
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||||||| | ||||| |||| ||||| ||||||||||    
T  44366018 tttgtcctcgtgagtttaactcagttggtaggaacaatacataatatat 44365970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 11931596 - 11931654
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||||| ||| |||| ||| ||||||||||||||||||||| |||||||||    
T  11931596 tttgtcctcgtgagcttagtttaattggtagggacaatgcataatatatgcaagatccg 11931654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 29896362 - 29896311
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||| ||||    
T  29896362 tgtcctcgtgagtttaattcagttgatagaaacaatgcataatatatgcaag 29896311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 298
Target Start/End: Original strand, 1238159 - 1238209
Alignment:
Q  248 ctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    |||||||| |||| | | |||||||||||||||||||||||||||||||||    
T  1238159 ctcgtgagcttaactcaattgatagggacaatgcataatatatacaagatc 1238209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 3197149 - 3197096
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||||  | ||||| ||||||||||||||||||||| ||||    
T  3197149 tttgtcctcgtgagtttagctcagttggtagggacaatgcataatatatgcaag 3197096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 3904204 - 3904241
Alignment:
Q  253 gagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3904204 gagtttaacttagttgatagggacaatgcataatatat 3904241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 28277746 - 28277698
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||||||  ||||||| || ||||||||||||||||||    
T  28277746 tttgtcctcgtgagtttagcttagttggtaaggacaatgcataatatat 28277698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 45032684 - 45032740
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    |||||||||||||| |||  | ||||| ||||||||||||||||||||| |||||||    
T  45032684 tttgtcctcgtgagcttacctcagttggtagggacaatgcataatatatgcaagatc 45032740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 242 - 289
Target Start/End: Complemental strand, 6238634 - 6238587
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatata 289  Q
    ||||||||||||||||||  ||| ||| ||||||||||||||||||||    
T  6238634 tttgtcctcgtgagtttagcttaattggtagggacaatgcataatata 6238587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 7262819 - 7262862
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||| ||||||||||||||||||||||||||  |||||||    
T  7262819 agttgatatggacaatgcataatatatacaagatcaaagattca 7262862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 27244650 - 27244701
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||| |||  | ||||||||||||||||||||||||||| ||||    
T  27244650 tgtcctcgtgagcttagctcagttgatagggacaatgcataatatatgcaag 27244701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 34364559 - 34364512
Alignment:
Q  248 ctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||| ||||||| |||| | |||||||||||||||||||    
T  34364559 ctcgtgagtttaacttagttggtaggaataatgcataatatatacaag 34364512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 37830726 - 37830769
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||    
T  37830726 agttggtagggacaatacataatatatacaagatccaagattca 37830769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 295
Target Start/End: Complemental strand, 6723144 - 6723094
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||||||| | |||||||| |||||||| ||||||||| ||||    
T  6723144 gtcctcgtgagtttaactcagttgatatggacaatgtataatatatgcaag 6723094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 7537105 - 7537159
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||| |||| | |||||||||| |||||||||||||||| |||| ||||    
T  7537105 tcctcgtgagattaactcagttgataggaacaatgcataatatatgcaaggtccg 7537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 9517079 - 9517021
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||||| |||  | ||||| || | ||||||||||||||||||||||||||    
T  9517079 tttgtcctcgtgagattagctcagttggtatgaacaatgcataatatatacaagatccg 9517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 431
Target Start/End: Complemental strand, 17897902 - 17897868
Alignment:
Q  397 tttatcttaaaaattatgcattcaacatattaaaa 431  Q
    ||||||||||||||| |||||||||||||||||||    
T  17897902 tttatcttaaaaattgtgcattcaacatattaaaa 17897868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 43356700 - 43356654
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatata 291  Q
    ||||| |||||||||  ||||||| ||||||||||||||||||||||    
T  43356700 gtcctagtgagtttatcttagttgttagggacaatgcataatatata 43356654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 13922695 - 13922650
Alignment:
Q  249 tcgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    ||||||| |||| | ||||| |||||||||||||||||||||||||    
T  13922695 tcgtgagcttaactcagttggtagggacaatgcataatatatacaa 13922650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 30045472 - 30045509
Alignment:
Q  270 tagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||||||||||||||||||| | |||||||||    
T  30045472 tagggacaatgcataatatatacaaggttcgagattca 30045509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 30050635 - 30050672
Alignment:
Q  270 tagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||||||||||||||||||| | |||||||||    
T  30050635 tagggacaatgcataatatatacaaggttcgagattca 30050672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 30141679 - 30141716
Alignment:
Q  270 tagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||||||||||||||||||| | |||||||||    
T  30141679 tagggacaatgcataatatatacaaggttcgagattca 30141716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 298
Target Start/End: Complemental strand, 30929108 - 30929059
Alignment:
Q  249 tcgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    |||| ||||||| | |||||||| ||||||||||||||||||| ||||||    
T  30929108 tcgtaagtttaactcagttgatatggacaatgcataatatatataagatc 30929059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 39955531 - 39955494
Alignment:
Q  394 aactttatcttaaaaattatgcattcaacatattaaaa 431  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  39955531 aactttatctttaaaattgtgcattcaacatattaaaa 39955494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 302
Target Start/End: Original strand, 7206116 - 7206176
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgag 302  Q
    |||||||||||||| |||  | ||||| ||| ||||||||||||||||| |||| ||||||    
T  7206116 tttgtcctcgtgagcttagctcagttggtagagacaatgcataatatatgcaaggtccgag 7206176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 293
Target Start/End: Complemental strand, 11265179 - 11265143
Alignment:
Q  257 ttaatttagttgatagggacaatgcataatatataca 293  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  11265179 ttaacttagttgatagggacgatgcataatatataca 11265143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 27935048 - 27935100
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||| |||||||||||| | ||||| ||||||||||||| ||||||| ||||    
T  27935048 ttgtcatcgtgagtttaactcagttggtagggacaatgcagaatatatgcaag 27935100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 30089062 - 30089098
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  30089062 agttggtagggacaatgcataatatatacaaggtccg 30089098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 30125666 - 30125702
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  30125666 agttggtagggacaatgcataatatatacaaggtccg 30125702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 31815951 - 31815899
Alignment:
Q  248 ctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||| |||| | ||||| ||||||||||||||||||||| |||| ||||    
T  31815951 ctcgtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccg 31815899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 32986005 - 32986061
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||| ||||||||| | |||||||| | | |||| |||||||||||||||||||    
T  32986005 tgtcctcttgagtttaactcagttgatatgaaaaatgaataatatatacaagatccg 32986061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 33063979 - 33064035
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||| |||  | |||||||| |||||||||||||||||| |||| ||||    
T  33063979 tgtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaggtccg 33064035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 39068756 - 39068720
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||| |||||||||||||||||| |||||||||    
T  39068756 agttgataaggacaatgcataatatatgcaagatccg 39068720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000004; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 7553670 - 7553723
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||||| | ||||| ||||||||||||||||||||| ||||    
T  7553670 tttgtcctcgtgagtttaactcagttggtagggacaatgcataatatatgcaag 7553723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 384 - 431
Target Start/End: Complemental strand, 3036581 - 3036534
Alignment:
Q  384 ttaaagtagcaactttatcttaaaaattatgcattcaacatattaaaa 431  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||||    
T  3036581 ttaaagtagcaactttatcttaaaaattgtgtattcaacttattaaaa 3036534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 24696054 - 24696011
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  24696054 agttgatatggacaatgcataatatatgcaagatccgagattca 24696011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 26886112 - 26886054
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||||||||||||||| ||||||| || ||||||||||||| ||||  ||||||||    
T  26886112 tttgtcctcgtgagtttaacttagttggtatggacaatgcataaaatatgtaagatccg 26886054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 8837913 - 8837969
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||  |||| |  ||||||||||||||||||||||||||||||| ||||    
T  8837913 tgtcctcgtgaacttaactcggttgatagggacaatgcataatatatacaaggtccg 8837969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 6109162 - 6109213
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||  | |||||||| ||||||||||||| |||||||||    
T  6109162 tgtcctcgtgagtttatatcagttgatatggacaatgcataaaatatacaag 6109213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 6447183 - 6447238
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||||||| | ||||| || |||||||||||||||||| |||| ||||    
T  6447183 gtcctcgtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccg 6447238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 302
Target Start/End: Original strand, 13575281 - 13575340
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgag 302  Q
    |||||||||||||||||  | ||||| |||||||||||||||| |||| |||| ||||||    
T  13575281 ttgtcctcgtgagtttagctcagttggtagggacaatgcataacatatgcaagttccgag 13575340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Complemental strand, 33482213 - 33482166
Alignment:
Q  248 ctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  33482213 ctcgtgagtttagcttagttgatagggacaatgcataatttatgcaag 33482166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 298
Target Start/End: Original strand, 8687859 - 8687913
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    ||||||||||| ||||| | | ||| ||||||||||| |||||||||||||||||    
T  8687859 tgtcctcgtgaatttaactcaattggtagggacaatgtataatatatacaagatc 8687913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 8982561 - 8982610
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    |||||||||||||||||| ||||  || | ||||||||||||||||||||    
T  8982561 gtcctcgtgagtttaattcagttagtatgaacaatgcataatatatacaa 8982610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 10601762 - 10601819
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||| |||||| ||||| || |||||||||||||||||| |||||| || ||||||    
T  10601762 cgtgagcttaattcagttggtatggacaatgcataatatatgcaagattcgggattca 10601819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 14303156 - 14303209
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||||  | ||||| || |||||||| ||||||||||||||    
T  14303156 tttgtcctcgtgagtttagctcagttggtatggacaatgtataatatatacaag 14303209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 32223946 - 32223901
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||| ||| || ||||||||| |||||||||||||||||    
T  32223946 gtcctcgtgagcttagttcagttgatagagacaatgcataatatat 32223901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Original strand, 33620889 - 33620942
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||| |||||||||||| | ||||  || |||||||||||||||||||||||    
T  33620889 tttgtcttcgtgagtttaactcagttagtatggacaatgcataatatatacaag 33620942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 1230731 - 1230683
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||| |||||||| | ||||| |||| ||||||||||||||||    
T  1230731 tttgtcctcgcgagtttaactcagttggtaggaacaatgcataatatat 1230683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 1243811 - 1243763
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||||||||| ||||  |||  ||||||||||||||||    
T  1243811 tttgtcctcgtgagtttaattcagtttgtagaaacaatgcataatatat 1243763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 1254511 - 1254463
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||||||||| ||||  |||  ||||||||||||||||    
T  1254511 tttgtcctcgtgagtttaattcagtttgtagaaacaatgcataatatat 1254463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 252 - 300
Target Start/End: Complemental strand, 7969000 - 7968952
Alignment:
Q  252 tgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||||||| ||||| || |||||||||||||||||| |||| ||||    
T  7969000 tgagtttaattcagttggtaaggacaatgcataatatatgcaaggtccg 7968952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 301
Target Start/End: Original strand, 11708980 - 11709036
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccga 301  Q
    ||||||||||| |||  | ||||| ||||||||||||||||||||| |||| |||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccga 11709036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 267 - 295
Target Start/End: Complemental strand, 12938972 - 12938944
Alignment:
Q  267 tgatagggacaatgcataatatatacaag 295  Q
    |||||||||||||||||||||||||||||    
T  12938972 tgatagggacaatgcataatatatacaag 12938944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 22948129 - 22948093
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  22948129 agttgatagggacaatgcataatatatgcaaggtccg 22948093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 32555246 - 32555298
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||||||||  ||||||| || ||||||||||||| |||| ||||    
T  32555246 ttgtcctcgtgagtttagcttagttggtatggacaatgcataaaatatgcaag 32555298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 33445562 - 33445614
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||| |||  | ||||| |||| |||||||||||||||||||||    
T  33445562 ttgtcctcgtgagcttagctcagttggtaggaacaatgcataatatatacaag 33445614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000006; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 2692228 - 2692271
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  2692228 agttgatatggacaatgcataatatatgcaagatccgagattca 2692271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 245 - 289
Target Start/End: Original strand, 7927694 - 7927738
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatata 289  Q
    ||||||||||| ||| || ||||||||||||||||||||||||||    
T  7927694 gtcctcgtgagcttagttcagttgatagggacaatgcataatata 7927738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 28478711 - 28478663
Alignment:
Q  383 cttaaagtagcaactttatcttaaaaattatgcattcaacatattaaaa 431  Q
    |||||||||| |||||||||||| ||||| || ||||||||||||||||    
T  28478711 cttaaagtagaaactttatcttagaaattgtgtattcaacatattaaaa 28478663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 29791166 - 29791118
Alignment:
Q  383 cttaaagtagcaactttatcttaaaaattatgcattcaacatattaaaa 431  Q
    |||||||||| |||||||||||| ||||| || ||||||||||||||||    
T  29791166 cttaaagtagaaactttatcttagaaattgtgtattcaacatattaaaa 29791118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 12412270 - 12412321
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||| |||| ||||||| ||| ||||||||||||||||| ||||    
T  12412270 tgtcctcgtgagcttaacttagttggtagagacaatgcataatatatgcaag 12412321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 307
Target Start/End: Original strand, 8809300 - 8809362
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||||||||||||| || | ||||||   |||||||||||||||| ||||||||||| ||||    
T  8809300 gtcctcgtgagtttagttcaattgataaaaacaatgcataatatatgcaagatccgaggttca 8809362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 291
Target Start/End: Complemental strand, 12336393 - 12336347
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatata 291  Q
    |||||||||||||||| | |||| ||| |||||||||||||||||||    
T  12336393 gtcctcgtgagtttaactcagttaatatggacaatgcataatatata 12336347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 287
Target Start/End: Original strand, 21884981 - 21885023
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataata 287  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||    
T  21884981 gtcctcgtaagtttaacttaattgatagggacaatgcataata 21885023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 2445292 - 2445345
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagat 297  Q
    ||||||||| || |||| | |||||||| | |||||||||||||||||||||||    
T  2445292 tgtcctcgtaagcttaactcagttgatatgaacaatgcataatatatacaagat 2445345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 3373449 - 3373396
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagat 297  Q
    |||| |||||| ||||| | |||||||| |||||||||||||||||| ||||||    
T  3373449 tgtcttcgtgaatttaactcagttgatatggacaatgcataatatatgcaagat 3373396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 31971520 - 31971585
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||||||||| || |||| | ||||| || |||||||||||||||||| |||| |||||| ||||    
T  31971520 tttgtcctcgtaagcttaactcagttggtaaggacaatgcataatatatgcaaggtccgaggttca 31971585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 11520583 - 11520627
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatat 288  Q
    |||||||||||||||| || ||||| ||| |||||||||||||||    
T  11520583 tgtcctcgtgagtttagttcagttggtagcgacaatgcataatat 11520627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 247 - 295
Target Start/End: Original strand, 14552333 - 14552381
Alignment:
Q  247 cctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||| |||| | ||||||||| || |||||||||||||||||||    
T  14552333 cctcgtgagcttaactcagttgatagagataatgcataatatatacaag 14552381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 15291759 - 15291707
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||| |||| ||||||| || |||||||| ||||||||| ||||    
T  15291759 ttgtcctcgtgagcttaacttagttggtaaggacaatgaataatatatgcaag 15291707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 24373779 - 24373727
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||||||||| | | ||| ||| ||||||||||||||||| ||||    
T  24373779 ttgtcctcgtgagtttaactcaattggtagagacaatgcataatatatgcaag 24373727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 28231473 - 28231437
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  28231473 agttgatagggacaatgcataatatatgcaaggtccg 28231437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 430
Target Start/End: Complemental strand, 29694722 - 29694677
Alignment:
Q  383 cttaaagtagcaactttatcttaaaaattatgcattcaacatattaaa 430  Q
    |||||||||| |||||||| ||||||||||||  ||||||||||||||    
T  29694722 cttaaagtagaaactttattttaaaaattatg--ttcaacatattaaa 29694677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000006; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 40445976 - 40446027
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||| | |||||||| |||||||||||||||||| ||||    
T  40445976 tgtcctcgtgagtttaactcagttgataaggacaatgcataatatatgcaag 40446027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 1082289 - 1082224
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||| |||| |||| ||| || ||||| ||||||||||| |||||||||||||| |||||||||||    
T  1082289 tttgccctcatgagcttagttcagttggtagggacaatgtataatatatacaaggtccgagattca 1082224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 8545061 - 8545001
Alignment:
Q  240 tctttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||| |||||||| |||| | |||||||| |||||||||||||||||| |||| ||||    
T  8545061 tctttgttctcgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtccg 8545001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 242 - 290
Target Start/End: Original strand, 10531531 - 10531579
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||||||| ||| |||||||| || ||||||||||||||||||    
T  10531531 tttgtcctcgtgagcttagtttagttgctatggacaatgcataatatat 10531579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 248 - 302
Target Start/End: Original strand, 17046331 - 17046385
Alignment:
Q  248 ctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgag 302  Q
    |||||||| |||| | ||||| || |||||||||||||||||| |||||||||||    
T  17046331 ctcgtgagcttaactcagttggtatggacaatgcataatatatgcaagatccgag 17046385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 244 - 290
Target Start/End: Original strand, 28447486 - 28447532
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||||| | ||||  |||||||||||||||||||||    
T  28447486 tgtcctcgtgagtttaactcagttagtagggacaatgcataatatat 28447532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 34436837 - 34436895
Alignment:
Q  237 atgtctttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||| |||||||||||| |||  | ||||| ||||||||||||||||||||| ||||    
T  34436837 atgtctctgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaag 34436895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Original strand, 4432110 - 4432155
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||| ||||||| | |||||||| ||||||||||||||||||    
T  4432110 gtcctcgtaagtttaactcagttgataaggacaatgcataatatat 4432155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 295
Target Start/End: Complemental strand, 7861051 - 7861018
Alignment:
Q  262 ttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||||||||||||||||||| ||||    
T  7861051 ttagttgatagggacaatgcataatatatgcaag 7861018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Complemental strand, 8885311 - 8885246
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    ||||||||||||||| ||| | | ||||| |||||||||||||| |||| |||| | |||||||||    
T  8885311 tttgtcctcgtgagtataactcatttgattgggacaatgcataaaatatgcaaggtacgagattca 8885246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 42663271 - 42663222
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    |||||||||||||||| | ||||| |||| ||||| ||||||||||||||    
T  42663271 gtcctcgtgagtttaactcagttgttaggaacaatacataatatatacaa 42663222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 427
Target Start/End: Original strand, 2523798 - 2523842
Alignment:
Q  383 cttaaagtagcaactttatcttaaaaattatgcattcaacatatt 427  Q
    ||||||| || |||||||||||| |||||||||||||||| ||||    
T  2523798 cttaaagcagtaactttatcttagaaattatgcattcaacttatt 2523842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 290
Target Start/End: Complemental strand, 2642825 - 2642785
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||| ||||||| |||||| ||||||||||||||    
T  2642825 cgtgagtttaacttagttggtagggataatgcataatatat 2642785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 297
Target Start/End: Complemental strand, 6237782 - 6237734
Alignment:
Q  249 tcgtgagtttaatttagttgatagggacaatgcataatatatacaagat 297  Q
    |||||||||||| | |||||  |||||||||||||||||||| ||||||    
T  6237782 tcgtgagtttaactaagttggcagggacaatgcataatatatgcaagat 6237734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 10515545 - 10515597
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||||||||| |||||||  | |||||||| ||||||||| ||||    
T  10515545 ttgtcctcgtgagtttaacttagttggaatggacaatgaataatatatgcaag 10515597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 13484574 - 13484542
Alignment:
Q  274 gacaatgcataatatatacaagatccgagattc 306  Q
    ||||||||||||||||||||||||| |||||||    
T  13484574 gacaatgcataatatatacaagatctgagattc 13484542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 14124307 - 14124347
Alignment:
Q  257 ttaatttagttgatagggacaatgcataatatatacaagat 297  Q
    |||| ||||||| || |||||||||||||||||||||||||    
T  14124307 ttaacttagttggtaaggacaatgcataatatatacaagat 14124347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 294
Target Start/End: Original strand, 14869991 - 14870035
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    |||||| |||| | ||||| |||||||||||||||||||||||||    
T  14869991 cgtgagcttaactcagttgctagggacaatgcataatatatacaa 14870035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 290
Target Start/End: Original strand, 17861974 - 17862018
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||  | ||||| |||||||||||||||||||||    
T  17861974 tcctcgtgagtttagctcagttggtagggacaatgcataatatat 17862018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 383 - 427
Target Start/End: Complemental strand, 34903444 - 34903400
Alignment:
Q  383 cttaaagtagcaactttatcttaaaaattatgcattcaacatatt 427  Q
    |||||||||| ||||||||||| |||||| |||||||||| ||||    
T  34903444 cttaaagtagtaactttatcttgaaaattgtgcattcaacttatt 34903400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000006; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 7827500 - 7827547
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||    
T  7827500 ttgtcctcgtgagtttaactcagttgatatggacaatgcataatatat 7827547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 290
Target Start/End: Original strand, 7829888 - 7829935
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||||    
T  7829888 ttgtcctcgtgagtttaactcagttgatatggacaatgcataatatat 7829935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 32753821 - 32753872
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||| || | | ||||||||||||||||||||||||||||||||    
T  32753821 tgtcctcgtgagcttgactcagttgatagggacaatgcataatatatacaag 32753872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 48924392 - 48924337
Alignment:
Q  239 gtctttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    |||| ||||||||||||||||  ||||||| ||||||||||| |||||||||||||    
T  48924392 gtctctgtcctcgtgagtttagcttagttggtagggacaatgtataatatatacaa 48924337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 295
Target Start/End: Original strand, 48517669 - 48517715
Alignment:
Q  249 tcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||| | |||||||||| |||||||||||||||||||||    
T  48517669 tcgtgagtttaactcagttgataggaacaatgcataatatatacaag 48517715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 250 - 295
Target Start/End: Complemental strand, 12976664 - 12976619
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||| | ||||||||||||||||||||||||||| ||||    
T  12976664 cgtgagtttaactcagttgatagggacaatgcataatatatgcaag 12976619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 28093346 - 28093398
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||| ||||||||||||| ||||| || |||||||||||||||||| ||||    
T  28093346 ttgtccccgtgagtttaattcagttggtatggacaatgcataatatatgcaag 28093398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 7738660 - 7738718
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||||||||||| |||| | ||||| |||||||||||||||| |||| |||| ||||    
T  7738660 tttgtcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaaggtccg 7738718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 10922370 - 10922320
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    |||||| |||| | ||||| ||||||||||||||||||||| |||||||||    
T  10922370 cgtgagcttaactcagttggtagggacaatgcataatatatgcaagatccg 10922320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 252 - 302
Target Start/End: Complemental strand, 39869867 - 39869817
Alignment:
Q  252 tgagtttaatttagttgatagggacaatgcataatatatacaagatccgag 302  Q
    ||||||||| | ||||| || ||||||||||||||||||||||| ||||||    
T  39869867 tgagtttaactcagttggtaaggacaatgcataatatatacaaggtccgag 39869817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 246 - 300
Target Start/End: Complemental strand, 46226143 - 46226089
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||||||||||| | | ||| ||||||||||||||||||||| |||| ||||    
T  46226143 tcctcgtgagtttaactcaattggtagggacaatgcataatatatgcaaggtccg 46226089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 290
Target Start/End: Complemental strand, 7464558 - 7464513
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||| |||| | ||||| |||||||||||||||||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatatat 7464513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 295
Target Start/End: Original strand, 8139710 - 8139759
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||| ||| |||||||| || |||||||||||||||||| ||||    
T  8139710 tcctcgtgagcttagtttagttggtatggacaatgcataatatatgcaag 8139759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 307
Target Start/End: Original strand, 9598430 - 9598495
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||||||| ||| || ||||| | ||||||||| |||| |||| |||| |||||||||||    
T  9598430 tttgtcctcgtgagcttagttcagttggttgggacaatgtataaaatatgcaaggtccgagattca 9598495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 22462302 - 22462351
Alignment:
Q  241 ctttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    |||||||| |||||| |||| | |||||||| ||||||||||||||||||    
T  22462302 ctttgtccccgtgagcttaactcagttgataaggacaatgcataatatat 22462351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 290
Target Start/End: Original strand, 23332640 - 23332689
Alignment:
Q  241 ctttgtcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||  |||| |||||||||| | ||||||||||||||||    
T  23332640 ctttgtcctcgtgaacttaacttagttgatatgaacaatgcataatatat 23332689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 295
Target Start/End: Complemental strand, 28052452 - 28052399
Alignment:
Q  242 tttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||| ||||||||| || ||||||||||||||| ||||||| ||| ||||    
T  28052452 tttgtccttgtgagtttagttcagttgatagggacaacgcataatttatccaag 28052399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 431
Target Start/End: Original strand, 31110632 - 31110669
Alignment:
Q  394 aactttatcttaaaaattatgcattcaacatattaaaa 431  Q
    |||||||||||||||||||||||||| | |||||||||    
T  31110632 aactttatcttaaaaattatgcattcgagatattaaaa 31110669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 298
Target Start/End: Original strand, 38387966 - 38388019
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    ||||||||||| |||  | ||||||||| ||||||||||||||||| |||||||    
T  38387966 gtcctcgtgagcttagctcagttgatagtgacaatgcataatatatgcaagatc 38388019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 7824799 - 7824851
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||||||||||| | ||||||||  |||||| |||||||||| ||||    
T  7824799 ttgtcctcgtgagtttaactcagttgatatagacaatacataatatatgcaag 7824851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 24145411 - 24145447
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  24145411 agttggtagggacaatgcataatatatacaaggtccg 24145447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 250 - 298
Target Start/End: Complemental strand, 35126331 - 35126283
Alignment:
Q  250 cgtgagtttaatttagttgatagggacaatgcataatatatacaagatc 298  Q
    ||||||||||| | ||||| |||||| |||||||||||||| |||||||    
T  35126331 cgtgagtttaactcagttggtagggataatgcataatatatgcaagatc 35126283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 246 - 290
Target Start/End: Complemental strand, 37921064 - 37921020
Alignment:
Q  246 tcctcgtgagtttaatttagttgatagggacaatgcataatatat 290  Q
    ||||||||||||||  | |||||||||||| ||||||||||||||    
T  37921064 tcctcgtgagtttagctcagttgatagggataatgcataatatat 37921020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Complemental strand, 41168207 - 41168155
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    |||||||||| || |||| |  ||||||||| |||||||||||||||||||||    
T  41168207 ttgtcctcgtaagcttaactcggttgataggaacaatgcataatatatacaag 41168155  T

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Target: scaffold0160 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 244 - 307
Target Start/End: Original strand, 22904 - 22967
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaagatccgagattca 307  Q
    |||||||||||| ||| ||||||||||| | ||||||||||| |||| |||| |||||| ||||    
T  22904 tgtcctcgtgagcttagtttagttgatatgaacaatgcataaaatatgcaaggtccgaggttca 22967  T

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Target: scaffold0143 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 295
Target Start/End: Original strand, 4463 - 4510
Alignment:
Q  248 ctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||||  ||||||||||||||||||||||||| ||| ||||    
T  4463 ctcgtgagtttagcttagttgatagggacaatgcataatttatgcaag 4510  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 99031 - 99081
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||||||| || | | ||||||||||||||||||||||||||| ||||    
T  99031 gtcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaag 99081  T

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Target: scaffold0045 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 63856 - 63905
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    |||||||||||||||  | ||||| ||||||||||| |||||||||||||    
T  63856 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaa 63905  T

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Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 71188 - 71237
Alignment:
Q  245 gtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaa 294  Q
    |||||||||||||||  | ||||| ||||||||||| |||||||||||||    
T  71188 gtcctcgtgagtttagctcagttggtagggacaatgtataatatatacaa 71237  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 243 - 295
Target Start/End: Original strand, 1599 - 1651
Alignment:
Q  243 ttgtcctcgtgagtttaatttagttgatagggacaatgcataatatatacaag 295  Q
    ||||||| ||||| |||  |||||||||||||||||| |||||||||| ||||    
T  1599 ttgtccttgtgagcttaggttagttgatagggacaatacataatatatccaag 1651  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 31970 - 31934
Alignment:
Q  264 agttgatagggacaatgcataatatatacaagatccg 300  Q
    ||||||||||||||||||||||||||| |||| ||||    
T  31970 agttgatagggacaatgcataatatatgcaaggtccg 31934  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 244 - 288
Target Start/End: Original strand, 119562 - 119606
Alignment:
Q  244 tgtcctcgtgagtttaatttagttgatagggacaatgcataatat 288  Q
    |||||||||||| |||| | ||||||||||||||||| |||||||    
T  119562 tgtcctcgtgagcttaactcagttgatagggacaatgtataatat 119606  T

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