View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19192_high_20 (Length: 526)

Name: NF19192_high_20
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19192_high_20
NF19192_high_20
[»] chr8 (31 HSPs)
chr8 (13-287)||(15650457-15650731)
chr8 (13-287)||(15626694-15626967)
chr8 (13-276)||(15628617-15628879)
chr8 (7-287)||(15652448-15652728)
chr8 (13-258)||(15608612-15608857)
chr8 (284-505)||(15608327-15608547)
chr8 (284-505)||(15616841-15617061)
chr8 (292-505)||(15640033-15640245)
chr8 (284-484)||(15626441-15626641)
chr8 (284-484)||(15650198-15650398)
chr8 (322-505)||(15652139-15652321)
chr8 (97-273)||(12063176-12063352)
chr8 (337-484)||(15995455-15995602)
chr8 (13-280)||(15971496-15971744)
chr8 (13-154)||(12067893-12068034)
chr8 (416-505)||(15628364-15628452)
chr8 (13-109)||(15640324-15640420)
chr8 (13-126)||(15990263-15990376)
chr8 (201-287)||(15995179-15995265)
chr8 (13-109)||(15617146-15617242)
chr8 (284-373)||(15628454-15628550)
chr8 (389-484)||(15971980-15972074)
chr8 (416-505)||(12068310-12068398)
chr8 (13-68)||(12063116-12063171)
chr8 (205-252)||(12068038-12068085)
chr8 (282-335)||(12068119-12068172)
chr8 (21-100)||(12138814-12138893)
chr8 (284-346)||(12063426-12063488)
chr8 (284-318)||(15652358-15652392)
chr8 (284-341)||(15971799-15971856)
chr8 (107-182)||(15995107-15995184)
[»] chr2 (1 HSPs)
chr2 (384-457)||(2660323-2660397)


Alignment Details
Target: chr8 (Bit Score: 243; Significance: 1e-134; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 13 - 287
Target Start/End: Complemental strand, 15650731 - 15650457
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaataagg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  15650731 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattggacatagtttcaaaaatatcgttactcatttctgaataagg 15650632  T
Q  113 aggacacaagatctggaaaatttaatgcaactttatcaatatctagtgttacagattaggcattttcaatagaaacaaagccacgctattcaattaggta 212  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  15650631 aggacacaagatctggaaaatttaatgcaactgtatcaatatctagtgttacaggttaggcattttcaatcgaaacaaagccacgctattcaattaggta 15650532  T
Q  213 ttttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactagccagtgtaaaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  15650531 ttttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactagtaagtgtaaaa 15650457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 13 - 287
Target Start/End: Complemental strand, 15626967 - 15626694
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaataagg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  15626967 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattggacatagtttcaaaaataccgttactcatttgtgaataagg 15626868  T
Q  113 aggacacaagatctggaaaatttaatgcaactttatcaatatctagtgttacagattaggcattttcaatagaaacaaagccacgctattcaattaggta 212  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||    
T  15626867 aggacacaagatctggaaaatttaatgcaactt-atcaatatctagtgttacaggttaggcattttcaatcgaaacaaagccacgctattcaattacgta 15626769  T
Q  213 ttttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactagccagtgtaaaa 287  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  15626768 ttttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactagtaagtgtaaaa 15626694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 13 - 276
Target Start/End: Complemental strand, 15628879 - 15628617
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaataagg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||    
T  15628879 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattggacatagtttcaaaaataccgttactcatttgtgaataagg 15628780  T
Q  113 aggacacaagatctggaaaatttaatgcaactttatcaatatctagtgttacagattaggcattttcaatagaaacaaagccacgctattcaattaggta 212  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||    
T  15628779 aggacacaagatctggaaaatttaatgcaac-ttatcaatatctagtgttacaggttaggcattttcaatcgaaacaaagccacgctattcaattacgta 15628681  T
Q  213 ttttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactag 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15628680 ttttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactag 15628617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 7 - 287
Target Start/End: Complemental strand, 15652728 - 15652448
Alignment:
Q  7 tcgaagaatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtga 106  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||    
T  15652728 tcgaaaaatatcatgtttaacccaaaacaaaatgaagtaagtttgcattaattttttgatcattggacatagtatcaaaaatatcgttactcatttgtga 15652629  T
Q  107 ataaggaggacacaagatctggaaaatttaatgcaactttatcaatatctagtgttacagattaggcattttcaatagaaacaaagccacgctattcaat 206  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  15652628 ataagcaggacacaagatctggaaaatttaatgcaactgtatcaatatctagtgttacaggttaggcattttcaatcgaaacaaagccacgctattcaat 15652529  T
Q  207 taggtattttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactagccagtgtaaaa 287  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||||    
T  15652528 taggtagtttcaattaaaactaggtgatcatatttttcagcatttaattagtctactttacatttactagtaagtgtaaaa 15652448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 258
Target Start/End: Complemental strand, 15608857 - 15608612
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaataagg 112  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||    
T  15608857 aatatcatgtttatccaaaaacaaaatgaagtaagtttgcattaattttttgatcattggacatagtttcaaaaatatcgctactcatttgtgaataagg 15608758  T
Q  113 aggacacaagatctggaaaatttaatgcaactttatcaatatctagtgttacagattaggcattttcaatagaaacaaagccacgctattcaattaggta 212  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  15608757 aggacacaagatctggaaaatttaatgcaactgtatcaatatctagtgttgcaggttaggcattttcaatcgaaacaaagccacgctattcaattaggta 15608658  T
Q  213 ttttcaattaaaactaggtgatcatatttttcagcatttaattagt 258  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  15608657 ttttcaattaaaactaggtgatcatatttttcagcatttaattagt 15608612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 284 - 505
Target Start/End: Complemental strand, 15608547 - 15608327
Alignment:
Q  284 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagttcgatggtg 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15608547 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagatcgatggtg 15608448  T
Q  384 gcattcaaactcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcactt 483  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15608447 gcattcaaactcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtctgatttcactt 15608348  T
Q  484 gtgaatcatgtatgattccgtt 505  Q
    |  |||||||||||||||||||    
T  15608347 g-aaatcatgtatgattccgtt 15608327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 284 - 505
Target Start/End: Complemental strand, 15617061 - 15616841
Alignment:
Q  284 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagttcgatggtg 383  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15617061 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagatcgatggtg 15616962  T
Q  384 gcattcaaactcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcactt 483  Q
     |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  15616961 tcattcaaactcaaagattaggtttagatatcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtctgatgtcactt 15616862  T
Q  484 gtgaatcatgtatgattccgtt 505  Q
    |  |||||||||||||||||||    
T  15616861 g-aaatcatgtatgattccgtt 15616841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 182; E-Value: 4e-98
Query Start/End: Original strand, 292 - 505
Target Start/End: Complemental strand, 15640245 - 15640033
Alignment:
Q  292 aagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagttcgatggtggcattcaa 391  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  15640245 aagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagatcgatggtgccattcaa 15640146  T
Q  392 actcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcacttgtgaatca 491  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||    
T  15640145 actcaaagattaggtttagatatcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtctgatgtcacttg-aaatca 15640047  T
Q  492 tgtatgattccgtt 505  Q
    ||||||||||||||    
T  15640046 tgtatgattccgtt 15640033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 15626641 - 15626441
Alignment:
Q  284 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagttcgatggtg 383  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  15626641 aaaatttgaagtcgtaaatgatttaaactgaaacaacaaccatgtaaatgataattttttagtaccatttttatggaaccaacaaacgagatcgatggtg 15626542  T
Q  384 gcattcaaactcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcactt 483  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  15626541 gcattcaaactcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtctgatgtcactt 15626442  T
Q  484 g 484  Q
    |    
T  15626441 g 15626441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 284 - 484
Target Start/End: Complemental strand, 15650398 - 15650198
Alignment:
Q  284 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagttcgatggtg 383  Q
    ||||| ||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15650398 aaaatttgaagtcgtaaatgatttaaactaaaacagcaacaatataaatgataattttttagtaccgtttttatggaaccaacaaacgagatcgatggtg 15650299  T
Q  384 gcattcaaactcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcactt 483  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  15650298 gcattcaaactcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtctgatatcactt 15650199  T
Q  484 g 484  Q
    |    
T  15650198 g 15650198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 322 - 505
Target Start/End: Complemental strand, 15652321 - 15652139
Alignment:
Q  322 accatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagttcgatggtggcattcaaactcaaagattaggtttagatttcttttag 421  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |    
T  15652321 accatgtaaatgataattttttagtaccgtttttatggaaccaacaaacgagatcgacggtggcattcaaactcaaagattaggtttagatttcttttgg 15652222  T
Q  422 ccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcacttgtgaatcatgtatgattccgtt 505  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||    
T  15652221 ccaaaaagaaagcaatggcggctgaacagcttcttgaacacttcaaatgtctgatttcacttg-aaatcatgtatgattccgtt 15652139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 97 - 273
Target Start/End: Original strand, 12063176 - 12063352
Alignment:
Q  97 tcatttgtgaataaggaggacacaagatctggaaaatttaatgcaactttatcaatatctagtgttacagattaggcattttcaatagaaacaaagccac 196  Q
    ||||||||||||||| | |||||||||||||||||||||||||  ||| ||| |||||||||||||| ||||||||||||| |||| || ||||||||||    
T  12063176 tcatttgtgaataagcaagacacaagatctggaaaatttaatgtgactgtataaatatctagtgttatagattaggcatttccaattgatacaaagccac 12063275  T
Q  197 gctattcaattaggtattttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttac 273  Q
     |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  12063276 actattcaattagctattttcaattgaaactaggtgatcatatttttcagcatttaaaaagtctacttgacatttac 12063352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 337 - 484
Target Start/End: Original strand, 15995455 - 15995602
Alignment:
Q  337 attttttagtaccgtttttatggaaccaacaaacgagttcgatggtggcattcaaactcaaagattaggtttagatttcttttagccaaaaagacagcaa 436  Q
    ||||||| |||||||||||| ||||||||||||| |  | || || | |||||||||||  ||||||||||||||||| |||||||||||||||||||||    
T  15995455 attttttggtaccgtttttacggaaccaacaaactacattgacggcgacattcaaactcctagattaggtttagattttttttagccaaaaagacagcaa 15995554  T
Q  437 tggcggctgaacagcttcttgaacacttcaaatgtttgatttcacttg 484  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15995555 tggcggctgaacagcttcttgaacacttcaaatgtctgatttcacttg 15995602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 13 - 280
Target Start/End: Original strand, 15971496 - 15971744
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaataagg 112  Q
    |||||||||||||| |||  ||||||| |||||||||||||||||||||| ||||| | || |||||||||||| ||| |||||||||||||||||||||    
T  15971496 aatatcatgtttatgccagcacaaaattaagtaagtttgcattaatttttggatcactggatatagtttcaaaaatattgttactcatttgtgaataagg 15971595  T
Q  113 aggacacaagatctggaaaatttaatgcaactttatcaatatctagtgttacagattaggcattttcaatagaaacaaagccacgctattcaattaggta 212  Q
    | ||| | |||||||||||||||||||  ||| |||||||||| |||| || |||||||||||||  |||  ||| ||| |||| ||||||||           
T  15971596 aagacgcgagatctggaaaatttaatgtgactgtatcaatatc-agtgatatagattaggcatttaaaattaaaaaaaatccacactattcaa------- 15971687  T
Q  213 ttttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactagccag 280  Q
             ||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  15971688 ---------aaaa--aggtgatcataattttcagcatttaattagtctgcttgacatttactagccag 15971744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 12067893 - 12068034
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaataagg 112  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||| || || ||||||||| ||||  ||||||||| |||||||||    
T  12067893 aatatcatttttatcccaaaacaagatgaagtaagtttgcattaatatttggatcattggaaatggtttcaaaaatatccatactcatttctgaataagg 12067992  T
Q  113 aggacacaagatctggaaaatttaatgcaactttatcaatat 154  Q
    | ||||||| |||||||||||||||||  ||| |||||||||    
T  12067993 aagacacaatatctggaaaatttaatgtgactgtatcaatat 12068034  T

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Target: chr8; HSP #16
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 416 - 505
Target Start/End: Complemental strand, 15628452 - 15628364
Alignment:
Q  416 ttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcacttgtgaatcatgtatgattccgtt 505  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  15628452 ttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtctgatttcacttgt-aatcatgtatgattccgtt 15628364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 15640420 - 15640324
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaata 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |  ||||||||||||||| |||||    
T  15640420 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattggacatagtttcaagaaaatcgttactcatttgggaata 15640324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 15990263 - 15990376
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaataagg 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || | |||||||||| ||| |||||||| || |||||||||    
T  15990263 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaatttttggatcattggatacagtttcaaaaatattgttactcacttttgaataagg 15990362  T
Q  113 aggacacaagatct 126  Q
    | || |||||||||    
T  15990363 aagatacaagatct 15990376  T

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Target: chr8; HSP #19
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 201 - 287
Target Start/End: Original strand, 15995179 - 15995265
Alignment:
Q  201 ttcaattaggtattttcaattaaaactaggtgatcatatttttcagcatttaattagtctacttgacatttactagccagtgtaaaa 287  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15995179 ttcaattagctattttcaattaaaacaaggtgatcttatttttcagcatttaattagtctacttgacatttactagccagcgtaaaa 15995265  T

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Target: chr8; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 13 - 109
Target Start/End: Complemental strand, 15617242 - 15617146
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcatttgtgaata 109  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||| |  ||||||||||||||| |||||    
T  15617242 aatatcatgtttatcccaaaacaaaataaagtaagtttgcattaatttttttatcattggacatagtttcaagaaaatcgttactcatttgggaata 15617146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 284 - 373
Target Start/End: Complemental strand, 15628550 - 15628454
Alignment:
Q  284 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgt--------aaatgataattttttagtaccgtttttatggaaccaacaaacgag 373  Q
    |||||||||||||||||||||||||||||||||||||||  ||||        |||||||||||||||||||||||||||||||||||||||||||||    
T  15628550 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaa-atgtgaagtcgtaaatgataattttttagtaccgtttttatggaaccaacaaacgag 15628454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 389 - 484
Target Start/End: Original strand, 15971980 - 15972074
Alignment:
Q  389 caaactcaaagattaggtttagatttcttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcacttg 484  Q
    ||||||| ||||||||||||||| || || ||||||||||||||| |||| |||||||| |||||||||||||||||||||||   ||||||||||    
T  15971980 caaactccaagattaggtttagactt-ttgtagccaaaaagacagaaatgacggctgaatagcttcttgaacacttcaaatgtccaatttcacttg 15972074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 416 - 505
Target Start/End: Original strand, 12068310 - 12068398
Alignment:
Q  416 ttttagccaaaaagacagcaatggcggctgaacagcttcttgaacacttcaaatgtttgatttcacttgtgaatcatgtatgattccgtt 505  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||| ||||||  |||||||| |||| |||||    
T  12068310 ttttatccaaaaagacagcaatggcggttgaacagcttcttgaacacttcaaatgtccgattgcacttg-aaatcatgtctgatcccgtt 12068398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 12063116 - 12063171
Alignment:
Q  13 aatatcatgtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatca 68  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  12063116 aatatcatgtttatcccaaaacaaaatgaagtaagtctgcattaatttttggatca 12063171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 205 - 252
Target Start/End: Original strand, 12068038 - 12068085
Alignment:
Q  205 attaggtattttcaattaaaactaggtgatcatatttttcagcattta 252  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12068038 attaggtattttcaattgaaactaggtgatcatatttttcagcattta 12068085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 12068119 - 12068172
Alignment:
Q  282 gtaaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgat 335  Q
    |||||||||||| |||||||||| |||||||||||| ||||| |||||||||||    
T  12068119 gtaaaatgtgaactcgtaaatgaattaaactgaaactgcaacaatgtaaatgat 12068172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 12138893 - 12138814
Alignment:
Q  21 gtttatcccaaaacaaaatgaagtaagtttgcattaattttttgatcattcgacatagtttcaaaattatcgttactcat 100  Q
    |||||||| |||||||||||||| ||||| ||| |||| ||| ||||||| ||  ||||||||||| ||||||| |||||    
T  12138893 gtttatcctaaaacaaaatgaagcaagttagcagtaatatttggatcattggatgtagtttcaaaaatatcgttgctcat 12138814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 12063426 - 12063488
Alignment:
Q  284 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataattttttagt 346  Q
    |||||||||| || ||||||| ||||||||| |||||||||||||  ||||||||||| ||||    
T  12063426 aaaatgtgaactcttaaatgaattaaactgagacagcaaccatgtgcatgataattttatagt 12063488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 318
Target Start/End: Complemental strand, 15652392 - 15652358
Alignment:
Q  284 aaaatgtgaagtcgtaaatgatttaaactgaaaca 318  Q
    |||||||||||||||||||||||||||||||||||    
T  15652392 aaaatgtgaagtcgtaaatgatttaaactgaaaca 15652358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 15971799 - 15971856
Alignment:
Q  284 aaaatgtgaagtcgtaaatgatttaaactgaaacagcaaccatgtaaatgataatttt 341  Q
    |||||| ||| |||||||||| |||||||||||||| |||| |||||||||| |||||    
T  15971799 aaaatgcgaactcgtaaatgaattaaactgaaacagaaaccttgtaaatgatcatttt 15971856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 182
Target Start/End: Original strand, 15995107 - 15995184
Alignment:
Q  107 ataaggaggacacaagatctggaaaatttaatgcaactttatcaatatctagtgt--tacagattaggcattttcaat 182  Q
    ||||||| || ||||||||| ||||||||| ||  ||| ||||||||||| ||||  || ||||||||||||||||||    
T  15995107 ataaggaagatacaagatcttgaaaatttattgtgactgtatcaatatcttgtgttatagagattaggcattttcaat 15995184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 384 - 457
Target Start/End: Complemental strand, 2660397 - 2660323
Alignment:
Q  384 gcattcaaactcaaagattaggtttaga-tttcttttagccaaaaagacagcaatggcggctgaacagcttcttg 457  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| |||| ||   |||||||||||||||||||    
T  2660397 gcattcaaactcaaagattaggtttagattttgttttagccaaaatgacatcagcagcggctgaacagcttcttg 2660323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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