View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19192_high_40 (Length: 388)
Name: NF19192_high_40
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19192_high_40 |
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Alignment Details
Target: chr1 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 5 - 370
Target Start/End: Original strand, 26120822 - 26121187
Alignment:
| Q |
5 |
aaacttataatgagatcgaaagggtatatgttaatcaaattacaagtatttgttttatgtctcttcaaattgtcaaaagaaaaatatcttatgtcttttt |
104 |
Q |
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| T |
26120822 |
aaacttataatgagatcgaaagagtatatgttaatcaaattacaagtattcgttttatgtctcttcaaattgtcaaaagaaaaatatcttatgtcttttc |
26120921 |
T |
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| Q |
105 |
aggttgtgaaaatatttatannnnnnngctgctgaaaaggttctacaaaaataacatccaggctttttgcaagaggagattacattctctttctagttaa |
204 |
Q |
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| T |
26120922 |
aggttgtgaaaatatttatatttttttgttgctgaaaaggttatacaaaaataacatccaggctttttgcaagaggagattacattctctttctagtcaa |
26121021 |
T |
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| Q |
205 |
tacatttgtgttatcacttaaaatgtaatgtaagttgatagtcaaaatggtctacagatgaattaagtttgaactgaaatcgagttaattgaatgaagaa |
304 |
Q |
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| T |
26121022 |
tacatttatgttatcgcttaaaatgtaatgtaagttgatagtcaaaatggtctacagatgaattaagtttgaactgaaatcgagttaattgaatgaagaa |
26121121 |
T |
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| Q |
305 |
ccaattgaattaggaacattcaaatacaagttagtcaaatatttctcaggtttaaaaagtgtgaaa |
370 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
26121122 |
tcaattgaattaggaacattcaaatacgagttagtcaaatatttctcaggtttaaaaagtgtgaaa |
26121187 |
T |
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