View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19192_high_65 (Length: 313)
Name: NF19192_high_65
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19192_high_65 |
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Alignment Details
Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 7927867 - 7927831
Alignment:
| Q |
11 |
tacaacccataataatttgcaaagagatgtttcaaat |
47 |
Q |
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| T |
7927867 |
tacaacccataataatttgcaaagagatgtttcaaat |
7927831 |
T |
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Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 300
Target Start/End: Original strand, 27351179 - 27351217
Alignment:
| Q |
262 |
gcctccaaatgctatgagcctcaaaaaataaatttaagt |
300 |
Q |
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| T |
27351179 |
gcctccaaatgttatgggcctcaaaaaataaatttaagt |
27351217 |
T |
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