View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19192_high_95 (Length: 253)
Name: NF19192_high_95
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19192_high_95 |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 4032508 - 4032291
Alignment:
| Q |
11 |
catcatcatgctacaacatttatattctcagatggcatcttgtgtgcacgtaaagacaaatgtataagttataacccttttctttttcttgtttatcttg |
110 |
Q |
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| T |
4032508 |
catcaccatgctacaacatttatattctcagatggcatcttgtgtgcacgtaaagacaaatgtataagttataacccttttctttttcttgtttatcttg |
4032409 |
T |
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| Q |
111 |
ttagtcttgattcttcaatttcatgaaaatgggaggagaaaaatttcgtgttgtttaaacattttgtgtatttaaatgac---taaccagacgagaaaca |
207 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
4032408 |
ttagtcttgattcttcgatttcatgaaaatgggaggagaaaaatttcgtgttgtttaaacattttgtgtatttaaatgactaataaccagacgagaaaca |
4032309 |
T |
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| Q |
208 |
tgtaaagtgtgcatgatg |
225 |
Q |
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|||| ||||||||||||| |
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| T |
4032308 |
tgtacagtgtgcatgatg |
4032291 |
T |
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