View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19192_low_116 (Length: 239)

Name: NF19192_low_116
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19192_low_116
NF19192_low_116
[»] chr5 (31 HSPs)
chr5 (42-239)||(32255893-32256090)
chr5 (42-239)||(32264939-32265136)
chr5 (109-230)||(32250418-32250539)
chr5 (1-42)||(4047686-4047727)
chr5 (1-42)||(8883353-8883394)
chr5 (1-42)||(20656342-20656383)
chr5 (1-39)||(8042438-8042476)
chr5 (1-39)||(8225773-8225811)
chr5 (1-39)||(8542920-8542958)
chr5 (1-39)||(11130311-11130349)
chr5 (1-39)||(12360947-12360985)
chr5 (1-39)||(15856461-15856499)
chr5 (1-39)||(27187296-27187334)
chr5 (1-39)||(27293382-27293420)
chr5 (1-39)||(35189335-35189373)
chr5 (1-39)||(35870090-35870128)
chr5 (1-39)||(36347290-36347328)
chr5 (1-39)||(42940926-42940964)
chr5 (1-39)||(43403319-43403357)
chr5 (1-38)||(2606504-2606541)
chr5 (1-38)||(29619301-29619338)
chr5 (1-39)||(33738-33776)
chr5 (1-39)||(5378049-5378087)
chr5 (1-39)||(6335102-6335140)
chr5 (1-39)||(7363181-7363219)
chr5 (1-39)||(16745448-16745486)
chr5 (1-39)||(18094564-18094602)
chr5 (1-39)||(27807826-27807864)
chr5 (1-39)||(36302342-36302380)
chr5 (1-39)||(39990286-39990324)
chr5 (1-39)||(40275264-40275302)
[»] chr4 (43 HSPs)
chr4 (82-239)||(28719586-28719743)
chr4 (1-42)||(23137842-23137883)
chr4 (1-39)||(13394416-13394454)
chr4 (1-39)||(13397555-13397593)
chr4 (1-39)||(18052872-18052910)
chr4 (1-39)||(20180527-20180565)
chr4 (1-39)||(20540336-20540374)
chr4 (1-39)||(21634728-21634766)
chr4 (1-39)||(26483070-26483108)
chr4 (1-39)||(29494846-29494884)
chr4 (1-39)||(30088681-30088719)
chr4 (1-39)||(41458778-41458816)
chr4 (1-39)||(41858873-41858911)
chr4 (1-39)||(45250230-45250268)
chr4 (1-39)||(46390866-46390904)
chr4 (1-39)||(47869124-47869162)
chr4 (1-39)||(49235842-49235880)
chr4 (1-39)||(388203-388241)
chr4 (1-39)||(596233-596271)
chr4 (1-39)||(7770614-7770652)
chr4 (1-39)||(13252250-13252288)
chr4 (1-39)||(16833687-16833725)
chr4 (1-39)||(22019250-22019288)
chr4 (1-39)||(23662685-23662723)
chr4 (1-39)||(26740300-26740338)
chr4 (1-39)||(31648417-31648455)
chr4 (1-39)||(33244852-33244890)
chr4 (1-39)||(33924795-33924833)
chr4 (1-39)||(34447792-34447830)
chr4 (1-39)||(34736079-34736117)
chr4 (1-39)||(35876926-35876964)
chr4 (1-39)||(36507408-36507446)
chr4 (1-39)||(36871332-36871370)
chr4 (1-39)||(36937358-36937396)
chr4 (1-39)||(37390655-37390693)
chr4 (1-39)||(41947647-41947685)
chr4 (1-39)||(41988046-41988084)
chr4 (1-39)||(56038499-56038537)
chr4 (1-39)||(56299845-56299883)
chr4 (1-42)||(26478034-26478075)
chr4 (1-42)||(35836209-35836250)
chr4 (1-38)||(38052385-38052422)
chr4 (3-39)||(37670076-37670112)
[»] chr1 (42 HSPs)
chr1 (81-234)||(23204866-23205022)
chr1 (1-39)||(5653571-5653609)
chr1 (1-39)||(9066481-9066519)
chr1 (1-39)||(16011076-16011114)
chr1 (1-39)||(16011445-16011483)
chr1 (1-39)||(16629937-16629975)
chr1 (1-39)||(26541105-26541143)
chr1 (1-39)||(32145513-32145551)
chr1 (1-39)||(34967414-34967452)
chr1 (1-39)||(36633113-36633151)
chr1 (1-39)||(38817008-38817046)
chr1 (1-39)||(42728377-42728415)
chr1 (1-39)||(49980350-49980388)
chr1 (1-39)||(51560906-51560944)
chr1 (1-39)||(51983842-51983880)
chr1 (4-39)||(52833759-52833794)
chr1 (1-39)||(1037542-1037580)
chr1 (1-39)||(1044448-1044486)
chr1 (1-39)||(6920815-6920853)
chr1 (1-39)||(8462364-8462402)
chr1 (1-39)||(11353720-11353758)
chr1 (1-39)||(12967058-12967096)
chr1 (1-39)||(13985352-13985390)
chr1 (1-39)||(15574947-15574985)
chr1 (1-39)||(19010935-19010973)
chr1 (1-39)||(26834988-26835026)
chr1 (1-39)||(28359727-28359765)
chr1 (1-39)||(29095407-29095445)
chr1 (1-39)||(30679433-30679471)
chr1 (1-39)||(31023673-31023711)
chr1 (1-39)||(31045426-31045464)
chr1 (1-39)||(31181335-31181373)
chr1 (1-39)||(31925150-31925188)
chr1 (1-39)||(32162295-32162333)
chr1 (1-39)||(34347431-34347469)
chr1 (1-39)||(38239024-38239062)
chr1 (1-39)||(42379351-42379389)
chr1 (1-39)||(42643268-42643306)
chr1 (1-39)||(42709835-42709873)
chr1 (1-39)||(50324987-50325025)
chr1 (1-38)||(32871350-32871387)
chr1 (3-39)||(2994295-2994331)
[»] chr8 (30 HSPs)
chr8 (1-39)||(5831102-5831140)
chr8 (1-39)||(7427253-7427291)
chr8 (1-39)||(9267886-9267924)
chr8 (1-39)||(12113429-12113467)
chr8 (1-39)||(22453398-22453436)
chr8 (1-39)||(23606343-23606381)
chr8 (1-39)||(30087811-30087849)
chr8 (1-39)||(30526317-30526355)
chr8 (1-39)||(35544076-35544114)
chr8 (1-39)||(42981353-42981391)
chr8 (1-39)||(597101-597139)
chr8 (1-39)||(4631022-4631060)
chr8 (1-39)||(6010197-6010235)
chr8 (1-39)||(11587842-11587880)
chr8 (1-39)||(11714598-11714636)
chr8 (1-39)||(14433232-14433270)
chr8 (1-39)||(16422020-16422058)
chr8 (1-39)||(16999351-16999389)
chr8 (1-39)||(18203102-18203140)
chr8 (1-39)||(24422395-24422433)
chr8 (1-39)||(27919509-27919547)
chr8 (1-39)||(31873503-31873541)
chr8 (1-39)||(32395120-32395158)
chr8 (1-39)||(39284356-39284394)
chr8 (1-39)||(42373092-42373130)
chr8 (2-39)||(4135847-4135884)
chr8 (2-39)||(13779659-13779696)
chr8 (1-34)||(29949263-29949296)
chr8 (1-41)||(17854437-17854477)
chr8 (7-39)||(24613004-24613036)
[»] chr7 (41 HSPs)
chr7 (1-39)||(6883001-6883039)
chr7 (1-39)||(10439284-10439322)
chr7 (1-39)||(10452994-10453032)
chr7 (1-39)||(23726459-23726497)
chr7 (1-39)||(24923459-24923497)
chr7 (1-39)||(25547794-25547832)
chr7 (1-39)||(29155577-29155615)
chr7 (1-39)||(29985853-29985891)
chr7 (1-39)||(35497816-35497854)
chr7 (1-39)||(35542120-35542158)
chr7 (1-39)||(38589585-38589623)
chr7 (1-39)||(40768560-40768598)
chr7 (1-39)||(44481146-44481184)
chr7 (1-39)||(44894657-44894695)
chr7 (1-39)||(45823043-45823081)
chr7 (1-39)||(47834235-47834273)
chr7 (1-38)||(28536715-28536752)
chr7 (3-39)||(38509995-38510031)
chr7 (1-36)||(3225598-3225633)
chr7 (1-36)||(44187045-44187080)
chr7 (1-39)||(9417686-9417724)
chr7 (1-39)||(19866360-19866398)
chr7 (1-39)||(22706847-22706885)
chr7 (1-39)||(25756504-25756542)
chr7 (1-39)||(27118931-27118969)
chr7 (1-39)||(29409486-29409524)
chr7 (1-39)||(31582063-31582101)
chr7 (1-39)||(32327925-32327963)
chr7 (1-39)||(34275538-34275576)
chr7 (5-39)||(35144174-35144208)
chr7 (1-39)||(36916826-36916864)
chr7 (1-39)||(37115892-37115930)
chr7 (1-39)||(37798208-37798246)
chr7 (1-39)||(42688609-42688647)
chr7 (5-39)||(43468361-43468395)
chr7 (1-39)||(45780745-45780783)
chr7 (1-39)||(47578763-47578801)
chr7 (2-39)||(5528544-5528581)
chr7 (1-42)||(24685511-24685552)
chr7 (1-37)||(7720825-7720861)
chr7 (3-39)||(11910519-11910555)
[»] chr6 (26 HSPs)
chr6 (1-39)||(1778982-1779020)
chr6 (1-39)||(6612535-6612573)
chr6 (1-39)||(8201620-8201658)
chr6 (1-39)||(12499554-12499592)
chr6 (1-39)||(12506883-12506921)
chr6 (1-39)||(12509309-12509347)
chr6 (1-39)||(13631146-13631184)
chr6 (1-39)||(15498002-15498040)
chr6 (1-39)||(21858686-21858724)
chr6 (1-39)||(25526736-25526774)
chr6 (1-39)||(31949224-31949262)
chr6 (1-39)||(32142534-32142572)
chr6 (1-39)||(2010152-2010190)
chr6 (1-39)||(4657962-4658000)
chr6 (1-39)||(8415087-8415125)
chr6 (1-39)||(9038331-9038369)
chr6 (1-39)||(9660309-9660347)
chr6 (1-39)||(11173045-11173083)
chr6 (1-39)||(11615513-11615551)
chr6 (1-39)||(14304506-14304544)
chr6 (1-39)||(14499268-14499306)
chr6 (1-39)||(31493040-31493078)
chr6 (1-39)||(31498429-31498467)
chr6 (1-39)||(31504007-31504045)
chr6 (6-39)||(19098679-19098712)
chr6 (1-38)||(32614746-32614783)
[»] chr3 (47 HSPs)
chr3 (1-39)||(2510109-2510147)
chr3 (1-39)||(4047162-4047200)
chr3 (1-39)||(4392415-4392453)
chr3 (1-39)||(6466417-6466455)
chr3 (1-39)||(17378331-17378369)
chr3 (1-39)||(23609317-23609355)
chr3 (1-39)||(25903992-25904030)
chr3 (1-39)||(29343362-29343400)
chr3 (1-39)||(30190483-30190521)
chr3 (1-39)||(30358876-30358914)
chr3 (1-39)||(31725782-31725820)
chr3 (1-39)||(33193047-33193085)
chr3 (1-39)||(33839882-33839920)
chr3 (1-39)||(36669308-36669346)
chr3 (1-39)||(38096189-38096227)
chr3 (1-39)||(38483416-38483454)
chr3 (1-39)||(41751261-41751299)
chr3 (1-39)||(41980034-41980072)
chr3 (1-39)||(43599729-43599767)
chr3 (1-39)||(44048259-44048297)
chr3 (1-39)||(47054156-47054194)
chr3 (1-39)||(50622585-50622623)
chr3 (1-39)||(54747793-54747831)
chr3 (3-39)||(51865849-51865885)
chr3 (1-39)||(3645789-3645827)
chr3 (1-39)||(8108595-8108633)
chr3 (1-39)||(9783123-9783161)
chr3 (1-39)||(15019938-15019976)
chr3 (1-39)||(15998903-15998941)
chr3 (1-39)||(20394075-20394113)
chr3 (1-39)||(35084421-35084459)
chr3 (1-39)||(35957937-35957975)
chr3 (1-39)||(38783525-38783563)
chr3 (1-39)||(42662542-42662580)
chr3 (1-39)||(43408427-43408465)
chr3 (5-39)||(45218874-45218908)
chr3 (5-39)||(45674207-45674241)
chr3 (1-39)||(45823970-45824008)
chr3 (1-39)||(48333868-48333906)
chr3 (1-39)||(48574726-48574764)
chr3 (1-39)||(52060355-52060393)
chr3 (1-39)||(52262384-52262422)
chr3 (1-39)||(52915183-52915221)
chr3 (1-39)||(53655050-53655088)
chr3 (1-39)||(54240909-54240947)
chr3 (1-38)||(23782348-23782385)
chr3 (1-33)||(3835381-3835413)
[»] chr2 (31 HSPs)
chr2 (1-39)||(1420749-1420787)
chr2 (1-39)||(10877464-10877502)
chr2 (1-39)||(23498196-23498234)
chr2 (1-39)||(28181571-28181609)
chr2 (1-39)||(34036258-34036296)
chr2 (1-39)||(38150678-38150716)
chr2 (1-39)||(38448272-38448310)
chr2 (1-39)||(39235066-39235104)
chr2 (1-39)||(41096085-41096123)
chr2 (1-36)||(19576209-19576244)
chr2 (1-39)||(325215-325253)
chr2 (1-39)||(1684218-1684256)
chr2 (1-39)||(5669090-5669128)
chr2 (1-39)||(6596626-6596664)
chr2 (1-39)||(7491537-7491575)
chr2 (1-39)||(7669807-7669845)
chr2 (1-39)||(8247221-8247259)
chr2 (1-39)||(14885178-14885216)
chr2 (1-39)||(18450013-18450051)
chr2 (1-39)||(19166265-19166303)
chr2 (1-39)||(26849906-26849944)
chr2 (1-39)||(27341671-27341709)
chr2 (1-39)||(28206491-28206529)
chr2 (1-39)||(28786807-28786845)
chr2 (1-39)||(29360908-29360946)
chr2 (1-39)||(29513528-29513566)
chr2 (1-39)||(29843745-29843783)
chr2 (1-39)||(36602111-36602149)
chr2 (1-39)||(40649211-40649249)
chr2 (1-38)||(5748541-5748578)
chr2 (3-39)||(44709919-44709955)
[»] scaffold1515 (1 HSPs)
scaffold1515 (1-39)||(1605-1643)
[»] scaffold0496 (1 HSPs)
scaffold0496 (1-39)||(12723-12761)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-39)||(4063-4101)
[»] scaffold0140 (1 HSPs)
scaffold0140 (1-39)||(18206-18244)
[»] scaffold0060 (1 HSPs)
scaffold0060 (1-39)||(21510-21548)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-39)||(11077-11115)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-39)||(63504-63542)


Alignment Details
Target: chr5 (Bit Score: 146; Significance: 5e-77; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 32256090 - 32255893
Alignment:
Q  42 gtgtgaccggttttcagtatgttagtattggtgttgtaattggttttccgagtctatggctcatagctacgcacaaaattagtagcagtatttggtagag 141  Q
    ||||| || |||||| | ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32256090 gtgtgtccagttttcggcatgttagtattagtgtcgtatttggttttccgagtctatggctcatagctacgcacaaaattagtagcagtatttggtagag 32255991  T
Q  142 taatctttgagatagatgacaagaccgcgccattcccttgcaccgcagaagacagcttcaacggtaacaacgaacttttgtttgtctctgagaaccca 239  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||    
T  32255990 taatctttgcgatagatgacaagaccgcgcccttcccttgcactgcagaagacagtttcaacggtatcaacgaactcttgtttgtctctgagaaccca 32255893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 32265136 - 32264939
Alignment:
Q  42 gtgtgaccggttttcagtatgttagtattggtgttgtaattggttttccgagtctatggctcatagctacgcacaaaattagtagcagtatttggtagag 141  Q
    ||||| || |||||| | ||||||||||| |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  32265136 gtgtgtccagttttcggcatgttagtattagtgtcgtatttggttttccgagtctatggctcatagctacacacaaaattagtagcagtatttggtagag 32265037  T
Q  142 taatctttgagatagatgacaagaccgcgccattcccttgcaccgcagaagacagcttcaacggtaacaacgaacttttgtttgtctctgagaaccca 239  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||| ||||||    
T  32265036 taatctttgcgatagatgacaagaccgcgcccttcccttgcaccgcagaagacagtttcaacggtatcaacgaactcttgtttgtctctgataaccca 32264939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 109 - 230
Target Start/End: Complemental strand, 32250539 - 32250418
Alignment:
Q  109 tacgcacaaaattagtagcagtatttggtagagtaatctttgagatagatgacaagaccgcgccattcccttgcaccgcagaagacagcttcaacggtaa 208  Q
    |||| ||||||||||||||||| ||||||||| ||||||||  || ||||||||||||||| || || ||||| ||| | |||||||| ||||||||||     
T  32250539 tacgaacaaaattagtagcagtgtttggtagaataatctttttgagagatgacaagaccgcaccctttccttgaaccacggaagacagtttcaacggtat 32250440  T
Q  209 caacgaacttttgtttgtctct 230  Q
    ||||||||| ||||||||||||    
T  32250439 caacgaactcttgtttgtctct 32250418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 4047686 - 4047727
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatattgg 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  4047686 tatgagttgttttacaaaattgtcctcaataaatgatattgg 4047727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 8883394 - 8883353
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatattgg 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8883394 tatgagttgttttacaaaattgtcctcaataaatgatattgg 8883353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 20656342 - 20656383
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatattgg 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  20656342 tatgagttgttttacaaaattgtcctcaataaatgatattgg 20656383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8042438 - 8042476
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8042438 tatgagttgttttacaaaattgtcctcaataaatgatat 8042476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8225811 - 8225773
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8225811 tatgagttgttttacaaaattgtcctcaataaatgatat 8225773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8542958 - 8542920
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8542958 tatgagttgttttacaaaattgtcttcaataaatgatat 8542920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11130349 - 11130311
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  11130349 tatgagttgttttacaaaattgtcctcaataaatgatat 11130311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12360985 - 12360947
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  12360985 tatgagttgttttacaaaattgtcctcaataaatgatat 12360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15856499 - 15856461
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  15856499 tatgagttgttttacaaaattgtcctcaataaatgatat 15856461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27187296 - 27187334
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  27187296 tatgagttgttttacaaaattgtcctcaataaatgatat 27187334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27293382 - 27293420
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  27293382 tatgagttgttttacaaaattgtcctcaataaatgatat 27293420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35189373 - 35189335
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  35189373 tatgagttgttttacaaaattgtcctcaataaatgatat 35189335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35870128 - 35870090
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  35870128 tatgagttgttttacaaaattgtcctcaataaatgatat 35870090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36347290 - 36347328
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36347290 tatgagttgttttacaaaattgtcctcaataaatgatat 36347328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42940964 - 42940926
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  42940964 tatgagttgttttacaaaattgtcctcaataaatgatat 42940926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 43403319 - 43403357
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  43403319 tatgagttgttttacaaaattgtcctcaataaatgatat 43403357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2606504 - 2606541
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgata 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  2606504 tatgagttgttttacaaaattgtcctcaataaatgata 2606541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29619301 - 29619338
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgata 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  29619301 tatgagttgttttacaaaattgtcctcaataaatgata 29619338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33738 - 33776
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  33738 tatgagttgttttacaaaattgtccttaataaatgatat 33776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5378049 - 5378087
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  5378049 tatgagttgttttacaaaattgtcctcaataaataatat 5378087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6335140 - 6335102
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  6335140 tatgagttgttttacaaaattgtccttaataaatgatat 6335102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7363181 - 7363219
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  7363181 tatgagttgttttacaaaattatcctcaataaatgatat 7363219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16745486 - 16745448
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  16745486 tatgagttgttttacaaaattgtctttaataaatgatat 16745448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18094564 - 18094602
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  18094564 tatgagttgttttacaaaattgtccttaataaatgatat 18094602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27807826 - 27807864
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  27807826 tatgagttgttttacaaaattatcctcaataaatgatat 27807864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36302342 - 36302380
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  36302342 tatgagttgttttacaaaattgtcctcaataaattatat 36302380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39990286 - 39990324
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  39990286 tatgagttgttttacaaaattgtccttaataaatgatat 39990324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40275264 - 40275302
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  40275264 tatgagttgttttacaaaattgtccttaataaatgatat 40275302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 28719743 - 28719586
Alignment:
Q  82 tggttttccgagtctatggctcatagctacgcacaaaattagtagcagtatttggtagagtaatctttgagatagatgacaagaccgcgccattcccttg 181  Q
    |||||||| | |||| |||||||||| || ||||||| |||||||| |||||||||||||||||||||| || ||||||||||||| || | || |||||    
T  28719743 tggttttctgtgtctgtggctcataggtaagcacaaagttagtagcggtatttggtagagtaatctttgggagagatgacaagaccacgtcctttccttg 28719644  T
Q  182 caccgcagaagacagcttcaacggtaacaacgaacttttgtttgtctctgagaaccca 239  Q
    ||||   |||||||| ||||||| || ||| ||||| |||||||||||||||| ||||    
T  28719643 caccatggaagacagtttcaacgatatcaatgaactcttgtttgtctctgagagccca 28719586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 23137883 - 23137842
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatattgg 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  23137883 tatgagttgttttacaaaattgtcctcaataaatgatattgg 23137842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13394416 - 13394454
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13394416 tatgagttgttttacaaaattgtcttcaataaatgatat 13394454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13397555 - 13397593
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13397555 tatgagttgttttacaaaattgtcttcaataaatgatat 13397593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 18052910 - 18052872
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  18052910 tatgagttgttttacaaaattgtcctcaataaatgatat 18052872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20180565 - 20180527
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  20180565 tatgagttgttttacaaaattgtcttcaataaatgatat 20180527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20540336 - 20540374
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  20540336 tatgagttgttttacaaaattgtcctcaataaatgatat 20540374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21634766 - 21634728
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  21634766 tatgagttgttttacaaaattgtcctcaataaatgatat 21634728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26483070 - 26483108
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26483070 tatgagttgttttacaaaattgtcctcaataaatgatat 26483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29494846 - 29494884
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29494846 tatgagttgttttacaaaattgtcctcaataaatgatat 29494884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30088681 - 30088719
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30088681 tatgagttgttttacaaaattgtcctcaataaatgatat 30088719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41458778 - 41458816
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41458778 tatgagttgttttacaaaattgtcctcaataaatgatat 41458816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41858911 - 41858873
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41858911 tatgagttgttttacaaaattgtcctcaataaatgatat 41858873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 45250268 - 45250230
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  45250268 tatgagttgttttacaaaattgtcctcaataaatgatat 45250230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 46390904 - 46390866
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  46390904 tatgagttgttttacaaaattgtcctcaataaatgatat 46390866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47869124 - 47869162
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  47869124 tatgagttgttttacaaaattgtcctcaataaatgatat 47869162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 49235842 - 49235880
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  49235842 tatgagttgttttacaaaattgtcctcaataaatgatat 49235880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 388241 - 388203
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  388241 tatgagttgttttacaaaattgtccttaataaatgatat 388203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 596233 - 596271
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  596233 tatgagttgttttacaaaattgttctcaataaatgatat 596271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7770652 - 7770614
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  7770652 tatgagttgttttacaaaattgttctcaataaatgatat 7770614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13252250 - 13252288
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  13252250 tatgagttgttttacaaaattgtccttaataaatgatat 13252288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16833687 - 16833725
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  16833687 tatgagttgttttacaaaattgtccttaataaatgatat 16833725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 22019288 - 22019250
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  22019288 tatgaattgttttacaaaattgtcctcaataaatgatat 22019250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23662723 - 23662685
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  23662723 tatgagttgttttacaaaattgtccttaataaatgatat 23662685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26740300 - 26740338
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  26740300 tatgagttgttttacaaaattgtccttaataaatgatat 26740338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31648417 - 31648455
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||| ||||||| ||||||||||||||    
T  31648417 tatgagttgttttacacaattgtcctcaataaatgatat 31648455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33244852 - 33244890
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  33244852 tatgagttgttttacaaaattatcctcaataaatgatat 33244890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33924795 - 33924833
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  33924795 tatgagttgttttacaaaattgtccttaataaatgatat 33924833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34447830 - 34447792
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  34447830 tatgagttgttttacaaaattatcctcaataaatgatat 34447792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34736117 - 34736079
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  34736117 tatgagttgttttacaaaattgtccttaataaatgatat 34736079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35876926 - 35876964
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  35876926 tatgagttgttttacaaaattgtccttaataaatgatat 35876964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36507408 - 36507446
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  36507408 tatgagttgttttacaaaattgtcattaataaatgatat 36507446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36871332 - 36871370
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  36871332 tatgagttgttttacaaaattatcctcaataaatgatat 36871370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36937396 - 36937358
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  36937396 tatgagttgttttacaaaattatcttcaataaatgatat 36937358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37390693 - 37390655
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  37390693 tatgagttgttttacaaaattgtccttaataaatgatat 37390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41947647 - 41947685
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  41947647 tatgagttgttttacaaaattgtccttaataaatgatat 41947685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41988046 - 41988084
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  41988046 tatgagttgttttacaaaattatcctcaataaatgatat 41988084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 56038499 - 56038537
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  56038499 tatgagttgttttataaaattgtcctcaataaatgatat 56038537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 56299883 - 56299845
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  56299883 tatgagttgttttacaaaattatcctcaataaatgatat 56299845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 26478034 - 26478075
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatattgg 42  Q
    |||||||||||||||||||||||  | |||||||||||||||    
T  26478034 tatgagttgttttacaaaattgttcttaataaatgatattgg 26478075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 35836250 - 35836209
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatattgg 42  Q
    |||||||||||||||||||||||| | ||||||| |||||||    
T  35836250 tatgagttgttttacaaaattgtccttaataaataatattgg 35836209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38052385 - 38052422
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgata 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  38052385 tatgagttgttttacaaaattgtccttaataaatgata 38052422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 37670112 - 37670076
Alignment:
Q  3 tgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||| | ||||||||||||    
T  37670112 tgagttgttttacaaaattgtccttaataaatgatat 37670076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 234
Target Start/End: Complemental strand, 23205022 - 23204866
Alignment:
Q  81 ttggttttccgagtctatggctcatagctacgcacaaaattagtagcagtatttggtagagtaatctttgagatagatgacaag---accgcgccattcc 177  Q
    |||||| || |||| | |||||||||| |||||||||||||||| || ||||||||||||||||||| || || ||||||||||   |||||||| || |    
T  23205022 ttggttgtctgagtatgtggctcataggtacgcacaaaattagtcgcggtatttggtagagtaatctctgtgagagatgacaagatcaccgcgccctttc 23204923  T
Q  178 cttgcaccgcagaagacagcttcaacggtaacaacgaacttttgtttgtctctgaga 234  Q
    |||||||| |||||||||| ||||||  || ||| ||||| ||||| ||||||||||    
T  23204922 cttgcaccacagaagacagtttcaaccatatcaatgaactcttgttcgtctctgaga 23204866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5653571 - 5653609
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5653571 tatgagttgttttacaaaattgtcctcaataaatgatat 5653609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 9066519 - 9066481
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  9066519 tatgagttgttttacaaaattgtcatcaataaatgatat 9066481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16011114 - 16011076
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16011114 tatgagttgttttacaaaattgtcctcaataaatgatat 16011076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16011445 - 16011483
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16011445 tatgagttgttttacaaaattgtcctcaataaatgatat 16011483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 16629937 - 16629975
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  16629937 tatgagttgttttacaaaattgtcctcaataaatgatat 16629975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26541105 - 26541143
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  26541105 tatgagttgttttacaaaattgtcctcaataaatgatat 26541143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32145551 - 32145513
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  32145551 tatgagttgttttacaaaattgtcctcaataaatgatat 32145513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34967414 - 34967452
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34967414 tatgagttgttttacaaaattgtcctcaataaatgatat 34967452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36633113 - 36633151
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36633113 tatgagttgttttacaaaattgtcctcaataaatgatat 36633151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38817046 - 38817008
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38817046 tatgagttgttttacaaaattgtcctcaataaatgatat 38817008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42728415 - 42728377
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  42728415 tatgagttgttttacaaaattgtcctcaataaatgatat 42728377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 49980350 - 49980388
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  49980350 tatgagttgttttacaaaattgtcctcaataaatgatat 49980388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51560944 - 51560906
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  51560944 tatgagttgttttacaaaattgtcctcaataaatgatat 51560906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 51983842 - 51983880
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  51983842 tatgagttgttttacaaaattgtcctcaataaatgatat 51983880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 52833794 - 52833759
Alignment:
Q  4 gagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52833794 gagttgttttacaaaattgtcctcaataaatgatat 52833759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1037542 - 1037580
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  1037542 tatgagttgttttataaaattgtcctcaataaatgatat 1037580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1044448 - 1044486
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  1044448 tatgagttgttttataaaattgtcctcaataaatgatat 1044486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6920815 - 6920853
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  6920815 tatgagttgttttacaaaattatcctcaataaatgatat 6920853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8462364 - 8462402
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  8462364 tatgagttgttttacaaaattgtccttaataaatgatat 8462402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11353758 - 11353720
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  11353758 tatgagttgttttacaaaattgtccttaataaatgatat 11353720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12967096 - 12967058
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  12967096 tatgagttgttttacaaaattgtccttaataaatgatat 12967058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13985352 - 13985390
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  13985352 tatgagttgttttacaaaattgtccttaataaatgatat 13985390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15574947 - 15574985
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  15574947 tatgagttgttttacaaaattgtccttaataaatgatat 15574985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 19010973 - 19010935
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  19010973 tatgagttgttttacaaaattgtccttaataaatgatat 19010935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 26835026 - 26834988
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  26835026 tatgagttgttttacaaaattatcctcaataaatgatat 26834988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28359727 - 28359765
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  28359727 tatgagttgttttacaaaattttcctcaataaatgatat 28359765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29095445 - 29095407
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  29095445 tatgagttgttttacaaaattgtcctcaataaattatat 29095407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30679471 - 30679433
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  30679471 tatgagttgttttacaaaactgtcctcaataaatgatat 30679433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31023673 - 31023711
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  31023673 tatgagttgttttacaaaattgtccttaataaatgatat 31023711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31045426 - 31045464
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  31045426 tatgaattgttttacaaaattgtcctcaataaatgatat 31045464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31181373 - 31181335
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  31181373 tatgagttgttttacaaaattgtctttaataaatgatat 31181335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31925150 - 31925188
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  31925150 tatgagttgttttacaaaattatcctcaataaatgatat 31925188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32162295 - 32162333
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  32162295 tatgagttgttttacaaaattatcctcaataaatgatat 32162333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34347469 - 34347431
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  34347469 tatgagttgttttacaaaattatcctcaataaatgatat 34347431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38239062 - 38239024
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  38239062 tatgagttgttttacaaaattatcctcaataaatgatat 38239024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42379389 - 42379351
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| || |||||||||||    
T  42379389 tatgagttgttttacaaaattgtcctcgataaatgatat 42379351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42643306 - 42643268
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  42643306 tatgagttgttttacaaaattatcctcaataaatgatat 42643268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42709873 - 42709835
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  42709873 tatgagttgttttacaaaattgtccttaataaatgatat 42709835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 50325025 - 50324987
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  50325025 tatgagttgttttacaaaactgtcctcaataaatgatat 50324987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32871350 - 32871387
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgata 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  32871350 tatgagttgttttacaaaattgtccttaataaatgata 32871387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 2994331 - 2994295
Alignment:
Q  3 tgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  2994331 tgagttggtttacaaaattgtcctcaataaatgatat 2994295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 5831140 - 5831102
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  5831140 tatgagttgttttacaaaattgtcctcaataaatgatat 5831102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7427253 - 7427291
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  7427253 tatgagttgttttacaaaattgtcctcaataaatgatat 7427291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9267886 - 9267924
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  9267886 tatgagttgttttacaaaattgtcctcaataaatgatat 9267924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12113429 - 12113467
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  12113429 tatgagttgttttacaaaattgtcctcaataaatgatat 12113467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22453398 - 22453436
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  22453398 tatgagttgttttacaaaattgtcctcaataaatgatat 22453436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23606381 - 23606343
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  23606381 tatgagttgttttacaaaattgtcctcaataaatgatat 23606343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30087811 - 30087849
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30087811 tatgagttgttttacaaaattgtcctcaataaatgatat 30087849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30526355 - 30526317
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30526355 tatgagttgttttacaaaattgtcctcaataaatgatat 30526317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35544076 - 35544114
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  35544076 tatgagttgttttacaaaattgtcctcaataaatgatat 35544114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 42981391 - 42981353
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  42981391 tatgagttgttttacaaaattgtcctcaataaatgatat 42981353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 597139 - 597101
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  597139 tatgagttgttttacaaaattgtcctcaataattgatat 597101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4631022 - 4631060
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  4631022 tatgagttgttttataaaattgtcctcaataaatgatat 4631060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6010197 - 6010235
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  6010197 tatgagttgttttacaaaattgtccttaataaatgatat 6010235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11587842 - 11587880
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  11587842 tatgagttgttttacaaaattgtccttaataaatgatat 11587880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11714636 - 11714598
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  11714636 tatgagttattttacaaaattgtcctcaataaatgatat 11714598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 14433232 - 14433270
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  14433232 tatgagttgttttacaaaattatcctcaataaatgatat 14433270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16422058 - 16422020
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  16422058 tatgagttgttttacaaaattgtccttaataaatgatat 16422020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 16999389 - 16999351
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  16999389 tatgagttgttttacaaaattatcctcaataaatgatat 16999351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18203102 - 18203140
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  18203102 tatgagttgttttacaaaattgtccttaataaatgatat 18203140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24422395 - 24422433
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  24422395 tatgagttgttttacaaaattatcctcaataaatgatat 24422433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27919509 - 27919547
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  27919509 tatgagttgttttacaaaattgtccttaataaatgatat 27919547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31873503 - 31873541
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  31873503 tatgagttgttttacaaaattatcctcaataaatgatat 31873541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32395120 - 32395158
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  32395120 tatgagttgttttacaaaactgtcctcaataaatgatat 32395158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 39284394 - 39284356
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  39284394 tatgagttgttttacaaaattgtcttcaataaattatat 39284356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42373092 - 42373130
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  42373092 tatgagttgttttacaaaattatcctcaataaatgatat 42373130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 4135884 - 4135847
Alignment:
Q  2 atgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  4135884 atgagttgttttacaaaattgtccttaataaatgatat 4135847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 13779659 - 13779696
Alignment:
Q  2 atgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  13779659 atgagttgttttacaaaattgtccttaataaatgatat 13779696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29949296 - 29949263
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaat 34  Q
    |||||||||||||||||||||||| |||||||||    
T  29949296 tatgagttgttttacaaaattgtcctcaataaat 29949263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17854477 - 17854437
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatattg 41  Q
    |||||||| ||||||||||||||| | ||||||||||||||    
T  17854477 tatgagttattttacaaaattgtccttaataaatgatattg 17854437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 24613036 - 24613004
Alignment:
Q  7 ttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||| ||||||||||||||    
T  24613036 ttgttttacaaaattgtcctcaataaatgatat 24613004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6883039 - 6883001
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6883039 tatgagttgttttacaaaattgtcttcaataaatgatat 6883001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10439284 - 10439322
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  10439284 tatgagttgttttacaaaattgtcctcaataaatgatat 10439322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10452994 - 10453032
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  10452994 tatgagttgttttacaaaattgtcctcaataaatgatat 10453032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23726459 - 23726497
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  23726459 tatgagttgttttacaaaattgtcctcaataaatgatat 23726497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 24923459 - 24923497
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  24923459 tatgagttgttttacaaaattgtcctcaataaatgatat 24923497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25547794 - 25547832
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  25547794 tatgagttgttttacaaaattgtcctcaataaatgatat 25547832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29155577 - 29155615
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29155577 tatgagttgttttacaaaattgtcctcaataaatgatat 29155615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29985853 - 29985891
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29985853 tatgagttgttttacaaaattgtcttcaataaatgatat 29985891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35497854 - 35497816
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  35497854 tatgagttgttttacaaaattgtcttcaataaatgatat 35497816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 35542158 - 35542120
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  35542158 tatgagttgttttacaaaattgtcctcaataaatgatat 35542120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38589623 - 38589585
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38589623 tatgagttgttttacaaaattgtcctcaataaatgatat 38589585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40768560 - 40768598
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40768560 tatgagttgttttacaaaattgtcttcaataaatgatat 40768598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44481184 - 44481146
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  44481184 tatgagttgttttacaaaattgtcctcaataaatgatat 44481146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 44894657 - 44894695
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  44894657 tatgagttgttttacaaaattgtcctcaataaatgatat 44894695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45823043 - 45823081
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  45823043 tatgagttgttttacaaaattgtcctcaataaatgatat 45823081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47834235 - 47834273
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  47834235 tatgagttgttttacaaaattgtcttcaataaatgatat 47834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28536715 - 28536752
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgata 38  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28536715 tatgagttgttttacaaaattgtcctcaataaatgata 28536752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 38509995 - 38510031
Alignment:
Q  3 tgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  38509995 tgagttgttttacaaaattgtcttcaataaatgatat 38510031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 3225633 - 3225598
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatga 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  3225633 tatgagttgttttacaaaattgtcctcaataaatga 3225598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 44187080 - 44187045
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatga 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  44187080 tatgagttgttttacaaaattgtcctcaataaatga 44187045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9417686 - 9417724
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  9417686 tatgagttgttttacaaaattgtccttaataaatgatat 9417724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19866360 - 19866398
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  19866360 tatgagttgttttacaaaattgtccttaataaatgatat 19866398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 22706847 - 22706885
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  22706847 tatgagttgttttacaaaattgtccttaataaatgatat 22706885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25756542 - 25756504
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  25756542 tatgagttgttttacaaaattgtccttaataaatgatat 25756504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27118931 - 27118969
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  27118931 tatgagttgttttacaaaattgtccttaataaatgatat 27118969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29409524 - 29409486
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  29409524 tatgagttgttttacaaaattgtcctcaataaattatat 29409486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31582063 - 31582101
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  31582063 tatgagttgttttacaaaattgtccttaataaatgatat 31582101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 32327925 - 32327963
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  32327925 tatgagttgttttacaaaattgtccttaataaatgatat 32327963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 34275538 - 34275576
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  34275538 tatgagttattttacaaaattgtcctcaataaatgatat 34275576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 35144174 - 35144208
Alignment:
Q  5 agttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  35144174 agttgttttacaaaattgtcctcaataaatgatat 35144208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36916864 - 36916826
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  36916864 tatgagttgttttacaaaattatcctcaataaatgatat 36916826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37115930 - 37115892
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  37115930 tatgagttgttttacaaaattgtcctcaataaattatat 37115892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37798246 - 37798208
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  37798246 tatgagttgttttacaaaattatcctcaataaatgatat 37798208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42688609 - 42688647
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  42688609 tatgagttattttacaaaattgtcatcaataaatgatat 42688647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 43468361 - 43468395
Alignment:
Q  5 agttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  43468361 agttgttttacaaaattgtcctcaataaatgatat 43468395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45780745 - 45780783
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  45780745 tatgagttgttttacaaatttgtcctcaataaatgatat 45780783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47578763 - 47578801
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  47578763 tatgagttgttttataaaattgtcctcaataaatgatat 47578801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 5528581 - 5528544
Alignment:
Q  2 atgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  5528581 atgagttgttttacgaaattgtcctcaataaatgatat 5528544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 24685511 - 24685552
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatattgg 42  Q
    ||||||||||||||||||||| || | |||||||||||||||    
T  24685511 tatgagttgttttacaaaattatccttaataaatgatattgg 24685552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7720861 - 7720825
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgat 37  Q
    |||||||||||||||||||||||| | ||||||||||    
T  7720861 tatgagttgttttacaaaattgtctttaataaatgat 7720825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 11910519 - 11910555
Alignment:
Q  3 tgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||| |||||| |||||||    
T  11910519 tgagttgttttacaaaattgtcttcaatatatgatat 11910555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1779020 - 1778982
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  1779020 tatgagttgttttacaaaattgtcctcaataaatgatat 1778982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6612573 - 6612535
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6612573 tatgagttgttttacaaaattgtcctcaataaatgatat 6612535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8201658 - 8201620
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  8201658 tatgagttgttttacaaaattgtcctcaataaatgatat 8201620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12499554 - 12499592
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  12499554 tatgagttgttttacaaaattgtcctcaataaatgatat 12499592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12506883 - 12506921
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  12506883 tatgagttgttttacaaaattgtcctcaataaatgatat 12506921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 12509347 - 12509309
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  12509347 tatgagttgttttacaaaattgtcctcaataaatgatat 12509309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 13631146 - 13631184
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  13631146 tatgagttgttttacaaaattgtcctcaataaatgatat 13631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15498040 - 15498002
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  15498040 tatgagttgttttacaaaattgtcctcaataaatgatat 15498002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 21858724 - 21858686
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  21858724 tatgagttgttttacaaaattgtcctcaataaatgatat 21858686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25526736 - 25526774
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  25526736 tatgagttgttttacaaaattgtcctcaataaatgatat 25526774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31949224 - 31949262
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  31949224 tatgagttgttttacaaaattgtcctcaataaatgatat 31949262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 32142572 - 32142534
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  32142572 tatgagttgttttacaaaattgtcctcaataaatgatat 32142534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2010152 - 2010190
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  2010152 tatgagttgttttacaaaattgtccttaataaatgatat 2010190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 4658000 - 4657962
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  4658000 tatgagttgttttacaaaattgtccttaataaatgatat 4657962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8415087 - 8415125
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  8415087 tatgagttgttttacaaaattgtccttaataaatgatat 8415125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9038331 - 9038369
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  9038331 tatgagttgttttacaaaattgtcctcaataaattatat 9038369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9660309 - 9660347
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  9660309 tatgagttgttttacaaaattgtccttaataaatgatat 9660347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11173083 - 11173045
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  11173083 tatgagttgttttacaaaattatcctcaataaatgatat 11173045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 11615551 - 11615513
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  11615551 tatgagttgttttacaaaattgtccttaataaatgatat 11615513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14304544 - 14304506
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  14304544 tatgagttgttttacaaaattatcctcaataaatgatat 14304506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14499306 - 14499268
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  14499306 tatgagttgttttacaaaattgtccttaataaatgatat 14499268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31493078 - 31493040
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  31493078 tatgagttgttttacaaaattgtccttaataaatgatat 31493040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31498467 - 31498429
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  31498467 tatgagttgttttacaaaattgtccttaataaatgatat 31498429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31504045 - 31504007
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  31504045 tatgagttgttttacaaaattgtccttaataaatgatat 31504007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 39
Target Start/End: Complemental strand, 19098712 - 19098679
Alignment:
Q  6 gttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||| ||||||||||||||    
T  19098712 gttgttttacaaaattgtcctcaataaatgatat 19098679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 32614783 - 32614746
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgata 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  32614783 tatgagttgttttacaaaattgtctttaataaatgata 32614746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2510109 - 2510147
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  2510109 tatgagttgttttacaaaattgtcctcaataaatgatat 2510147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4047162 - 4047200
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4047162 tatgagttgttttacaaaattgtcctcaataaatgatat 4047200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4392415 - 4392453
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  4392415 tatgagttgttttacaaaattgtcctcaataaatgatat 4392453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 6466417 - 6466455
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  6466417 tatgagttgttttacaaaattgtcctcaataaatgatat 6466455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17378369 - 17378331
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  17378369 tatgagttgttttacaaaattgtcctcaataaatgatat 17378331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 23609317 - 23609355
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  23609317 tatgagttgttttacaaaattgtcctcaataaatgatat 23609355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 25903992 - 25904030
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  25903992 tatgagttgttttacaaaattgtcctcaataaatgatat 25904030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29343400 - 29343362
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  29343400 tatgagttgttttacaaaattgtcctcaataaatgatat 29343362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30190521 - 30190483
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30190521 tatgagttgttttacaaaattgtcctcaataaatgatat 30190483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30358914 - 30358876
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30358914 tatgagttgttttacaaaattgtcctcaataaatgatat 30358876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31725820 - 31725782
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  31725820 tatgagttgttttacaaaattgtcctcaataaatgatat 31725782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33193047 - 33193085
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  33193047 tatgagttgttttacaaaattgtcctcaataaatgatat 33193085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 33839882 - 33839920
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  33839882 tatgagttgttttacaaaattgtcctcaataaatgatat 33839920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36669346 - 36669308
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  36669346 tatgagttgttttacaaaattgtcctcaataaatgatat 36669308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38096227 - 38096189
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38096227 tatgagttgttttacaaaattgtcatcaataaatgatat 38096189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38483416 - 38483454
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38483416 tatgagttgttttacaaaattgtcctcaataaatgatat 38483454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41751299 - 41751261
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41751299 tatgagttgttttacaaaattgtcctcaataaatgatat 41751261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41980072 - 41980034
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41980072 tatgagttgttttacaaaattgtcctcaataaatgatat 41980034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43599767 - 43599729
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  43599767 tatgagttgttttacaaaattgtcctcaataaatgatat 43599729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 44048297 - 44048259
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  44048297 tatgagttgttttacaaaattgtcctcaataaatgatat 44048259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 47054194 - 47054156
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  47054194 tatgagttgttttacaaaattgtcctcaataaatgatat 47054156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 50622585 - 50622623
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  50622585 tatgagttgttttacaaaattgtcctcaataaatgatat 50622623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 54747793 - 54747831
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  54747793 tatgagttgttttacaaaattgtcctcaataaatgatat 54747831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 51865885 - 51865849
Alignment:
Q  3 tgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||| ||||||||||||||    
T  51865885 tgagttgttttacaaaattgtcctcaataaatgatat 51865849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 3645789 - 3645827
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  3645789 tatgggttgttttacaaaattgtcctcaataaatgatat 3645827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8108633 - 8108595
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||| |||||||||||||||||| ||||||||||||||    
T  8108633 tatgaattgttttacaaaattgtcctcaataaatgatat 8108595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 9783123 - 9783161
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  9783123 tatgagttgttttacaaaattgttctcaataaatgatat 9783161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 15019976 - 15019938
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||| | ||||||||||||||    
T  15019976 tatgagttgttttacaaaattgacctcaataaatgatat 15019938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 15998903 - 15998941
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  15998903 tatgagttgttttacaaaattgtactcaataaatgatat 15998941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20394075 - 20394113
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  20394075 tatgagttgttttacaaaattgtccttaataaatgatat 20394113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35084421 - 35084459
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  35084421 tatgagttgttttacaaaattgtcctcaataaattatat 35084459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 35957937 - 35957975
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  35957937 tatgagttgttttacaaaattgtccttaataaatgatat 35957975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 38783525 - 38783563
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  38783525 tatgagttgttttacaaaattgttctcaataaatgatat 38783563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 42662542 - 42662580
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  42662542 tatgagttgttttacaaaattgtccttaataaatgatat 42662580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 43408465 - 43408427
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  43408465 tatgagttgttttacaaaattgtcctcaataaataatat 43408427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 45218908 - 45218874
Alignment:
Q  5 agttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  45218908 agttgttttacaaaattgtcatcaataaatgatat 45218874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 45674207 - 45674241
Alignment:
Q  5 agttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  45674207 agttgttttacaaaattgtcctcaataaatgatat 45674241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 45823970 - 45824008
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  45823970 tatgagttgttttacaaaattgttctcaataaatgatat 45824008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 48333906 - 48333868
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  48333906 tatgagttgttttacaaaattatcctcaataaatgatat 48333868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 48574726 - 48574764
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  48574726 tatgagttgttttacaaaattgtcttcaataaataatat 48574764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 52060355 - 52060393
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  52060355 tatgagttgttttacaaaattatcctcaataaatgatat 52060393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52262422 - 52262384
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  52262422 tatgagttgttttacaaaattgtctttaataaatgatat 52262384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 52915221 - 52915183
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  52915221 tatgagttattttacaaaattgtcctcaataaatgatat 52915183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 53655050 - 53655088
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  53655050 tatgagttgttttataaaattgtcctcaataaatgatat 53655088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 54240909 - 54240947
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  54240909 tatgagttgttttacaaaattgttctcaataaatgatat 54240947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23782385 - 23782348
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgata 38  Q
    ||||| |||||||||||||||||| |||||||||||||    
T  23782385 tatgaattgttttacaaaattgtcctcaataaatgata 23782348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 3835413 - 3835381
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  3835413 tatgagttgttttacaaaattgtcctcaataaa 3835381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000008; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1420749 - 1420787
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  1420749 tatgagttgttttacaaaattgtcctcaataaatgatat 1420787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 10877502 - 10877464
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  10877502 tatgagttgttttacaaaattgtcctcaataaatgatat 10877464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 23498234 - 23498196
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  23498234 tatgagttgttttacaaaattgtcctcaataaatgatat 23498196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28181571 - 28181609
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  28181571 tatgagttgttttacaaaattgtcctcaataaatgatat 28181609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34036296 - 34036258
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  34036296 tatgagttgttttacaaaattgtcctcaataaatgatat 34036258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38150716 - 38150678
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38150716 tatgagttgttttacaaaattgtcctcaataaatgatat 38150678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 38448310 - 38448272
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  38448310 tatgagttgttttacaaaattgtcatcaataaatgatat 38448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39235066 - 39235104
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  39235066 tatgagttgttttacaaaattgtcttcaataaatgatat 39235104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 41096123 - 41096085
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41096123 tatgagttgttttacaaaattgtcctcaataaatgatat 41096085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 19576244 - 19576209
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatga 36  Q
    |||||||||||||||||||||||| |||||||||||    
T  19576244 tatgagttgttttacaaaattgtcctcaataaatga 19576209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 325215 - 325253
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  325215 tatgagttgttttacaaaattatcctcaataaatgatat 325253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 1684218 - 1684256
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  1684218 tatgagttgttttacaaaattgtccttaataaatgatat 1684256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 5669090 - 5669128
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  5669090 tatgagttgttttacaaaattgtccttaataaatgatat 5669128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 6596664 - 6596626
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  6596664 tatgagttgttttacaaaattgtccttaataaatgatat 6596626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 7491537 - 7491575
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  7491537 tatgagttgttttacaaaattatcctcaataaatgatat 7491575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7669845 - 7669807
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  7669845 tatgagttgttttacaaaattgtccttaataaatgatat 7669807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 8247221 - 8247259
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  8247221 tatgagttgttttacaaaattatcctcaataaatgatat 8247259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 14885216 - 14885178
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  14885216 tatgagttgttttacaaaattgtcctcaataaattatat 14885178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18450013 - 18450051
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  18450013 tatgagttgttttacaaaattgtccttaataaatgatat 18450051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19166265 - 19166303
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  19166265 tatgggttgttttacaaaattgtcctcaataaatgatat 19166303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 26849906 - 26849944
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  26849906 tatgagttgttttacaaaattgtccttaataaatgatat 26849944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 27341671 - 27341709
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  27341671 tatgagttgttttacaaaattgtccttaataaatgatat 27341709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28206491 - 28206529
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  28206491 tatgagttgttttacaaaattatcctcaataaatgatat 28206529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28786807 - 28786845
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  28786807 tatgagttgttttacaaaattatcctcaataaatgatat 28786845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29360946 - 29360908
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  29360946 tatgagttgttttacaaaattgtccttaataaatgatat 29360908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29513566 - 29513528
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  29513566 tatgagttgttttacaaaattgtctttaataaatgatat 29513528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 29843745 - 29843783
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  29843745 tatgagttgttttacaaaattgtccttaataaatgatat 29843783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36602111 - 36602149
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  36602111 tatgagttgttttacaaaattgtccttaataaatgatat 36602149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 40649249 - 40649211
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  40649249 tatgagttgttttacaaaattgtccttaataaatgatat 40649211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 5748541 - 5748578
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgata 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  5748541 tatgagttgttttacaaaattgtccttaataaatgata 5748578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 44709919 - 44709955
Alignment:
Q  3 tgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||| | ||||||||||||    
T  44709919 tgagttgttttacaaaattgtccttaataaatgatat 44709955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1515 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1515
Description:

Target: scaffold1515; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1643 - 1605
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  1643 tatgagttgttttacaaaattgtcctcaataaataatat 1605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0496 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12723 - 12761
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  12723 tatgagttgttttacaaaattatcctcaataaatgatat 12761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4063 - 4101
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  4063 tatgagttgttttacaaaattgtccttaataaatgatat 4101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18206 - 18244
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  18206 tatgagttgttttacaaaattgtccttaataaatgatat 18244  T

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Target: scaffold0060 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21510 - 21548
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  21510 tatgagttgttttacaaaattgtccttaataaatgatat 21548  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11077 - 11115
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  11077 tatgagttgttttacaaaattgtccttaataaatgatat 11115  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 63542 - 63504
Alignment:
Q  1 tatgagttgttttacaaaattgtcgtcaataaatgatat 39  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  63542 tatgagttgttttacaaaactgtcctcaataaatgatat 63504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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