View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19192_low_118 (Length: 238)
Name: NF19192_low_118
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19192_low_118 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 48171752 - 48171532
Alignment:
| Q |
1 |
gtcttggatactgaaggtgattattatgataatgaaaaccaacatgattatagttcacaagatgctaaagaaacaaaggagttctactccaagtcaagct |
100 |
Q |
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| T |
48171752 |
gtctcggatactgaaggtgattattatgataatgaaaaccaacatgattatagttcacaagatgctaaagaaacaaaggagttctactccaagtcaagct |
48171653 |
T |
|
| Q |
101 |
gcaaaagcagcaccaaatcaaggaaggggaccgtttcttctggccgaaggaacaactccagttcagattcagaaaatgaccacgaaagcagtaggagaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48171652 |
gcaaaagcagcaccaaatcaaggaaggggaccgtttcttctggccgaaggaacaactccagttcagattcagaaaatgaccacgaaagcagtaggagaaa |
48171553 |
T |
|
| Q |
201 |
gcatgacgtggatggaagttt |
221 |
Q |
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|||||| |||||||||||||| |
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| T |
48171552 |
gcatgaagtggatggaagttt |
48171532 |
T |
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