View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19192_low_34 (Length: 421)
Name: NF19192_low_34
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19192_low_34 |
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Alignment Details
Target: chr2 (Bit Score: 373; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 14 - 406
Target Start/End: Original strand, 43758370 - 43758762
Alignment:
| Q |
14 |
atcatgaggcccattccaggcataactgcgaatcaaaacattccacagaaacaaattctgtttgggaattttatcaaacaggttacgtgcattacgaaga |
113 |
Q |
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| T |
43758370 |
atcatgaggcccattccaggcataaccgcgaatcaaaacattccacagaaacaaattctgtttgggaattttatcaaacaggttacgtgcattaagaaga |
43758469 |
T |
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| Q |
114 |
caattcgaaaccgcataaagatggacaagtttagtggctaagtcctgattgtaagcaatacccagatggtagaattgagcatggagctgtttaccggggt |
213 |
Q |
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| T |
43758470 |
gaattcgaaaccgcataaagatggacaagtttagtggctaagtcctgattgtaagcaatacccagatggtagaattgagcatggagctgtttaccggggt |
43758569 |
T |
|
| Q |
214 |
ttaacgccttcgaatcaatacaagattggagtaatgaagtgtaaccgtagtgggtggttggttgtggaggaaaggaatcaacagaagcggtttgatgtgt |
313 |
Q |
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| T |
43758570 |
ttaacgccttcgaatcaatacaagattggagcaatgaagtgtaaccgtagtgggtggttggttgtggaggaaaggaatcaacagaagcggtttgatgtgt |
43758669 |
T |
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| Q |
314 |
ggctaatgagtggtagaaagattgagaaacagggaagaggttaaaaatgaatgaagtatgttgtgttttcttaatggaatagaaagacatttg |
406 |
Q |
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| T |
43758670 |
ggctaatgagtggtagaaagattgagaaaaagggaagaggttaaaaatgaatgaagtatgttgtgttttcttaatggaatagaaagacatttg |
43758762 |
T |
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