View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19192_low_94 (Length: 254)
Name: NF19192_low_94
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19192_low_94 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 34696267 - 34696488
Alignment:
| Q |
18 |
aactatcatgatcatcaaactccacagactgaacagcaccaccagagttaagcatgttcaccaaccctattggagcaaactgaatcaacccttttgaaaa |
117 |
Q |
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| T |
34696267 |
aactagcatgatcatcaaactccacagactgaacagcaccaccagagttaagcatgttcaccaaccctattggagcaaactgaatcaacccttttgaaaa |
34696366 |
T |
|
| Q |
118 |
caccctcactggagacactgtcattagctcaaaactaaatggctcgagtgaaacttccaatttatcggaacacttcatgagcttcagtttcttctccttg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34696367 |
caccctcactggagacactgtcattagctcaaaactgaatggctcgagtgaaacttccaatttatcggaacacttcatgagcttcagtttcttctccttg |
34696466 |
T |
|
| Q |
218 |
aagaaatacacagcaaacacat |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
34696467 |
aagaaatacacagcaaacacat |
34696488 |
T |
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