View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19192_low_96 (Length: 253)
Name: NF19192_low_96
Description: NF19192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19192_low_96 |
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Alignment Details
Target: chr8 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 41224064 - 41224278
Alignment:
| Q |
1 |
ttagtgcaatagtgcaacttttgctaatttcgcataccaagttttcatacgtttcaaacaatgagatcttaggggatgttccatggttcacgagtacggt |
100 |
Q |
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| T |
41224064 |
ttagtgcaatagtgcaacttttgctactttctcataccaagttttcatacgtttcaaacaatgagatcttaggggatgttccatggttcacgagtacggt |
41224163 |
T |
|
| Q |
101 |
caacttatattcaagacctagtaggatgatgcaatgttactaagcttttgaggttttcctaaccaaaaacatttacgccatgattgttgtggtgattatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41224164 |
caacttatattcaagacctagtaggatgatgcaatgttactaagcttttgaggttttcctaaccaaaaacatttacgccatgattgttgtggtgattatg |
41224263 |
T |
|
| Q |
201 |
atcctctctaacttc |
215 |
Q |
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||||||||||||||| |
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| T |
41224264 |
atcctctctaacttc |
41224278 |
T |
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