View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19193_low_19 (Length: 452)
Name: NF19193_low_19
Description: NF19193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19193_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 163 - 417
Target Start/End: Original strand, 25814482 - 25814736
Alignment:
| Q |
163 |
aagttttgtctacaaatacatgtacccaacaaaatttcagggtgcgtaagaatttatttgtttctaaaccttgtgtcgcctacctttttacttgttgaaa |
262 |
Q |
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| T |
25814482 |
aagttttgtctacaaatacatgtacccaacaaaatttcagggtgcgtaagaatttatttgtttctaaaccttgtgtcgcctacctttttacttgttgaaa |
25814581 |
T |
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| Q |
263 |
ttctttctcaagaaagccaatgaatctcacttgcactagcccttcttctacccgaccggaagaatttatcattaaaagtaagggtcatgctaacttaatg |
362 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25814582 |
ttctttctcaagaaagccaatgaatctcacttgcactagcccttcttctacccgaccggaagaatttatcattaaaagtaagggtcatgctaacttaatg |
25814681 |
T |
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| Q |
363 |
tccctgaggcacccatcaaagaaacaaaaagaaaaagttttcattgaaaataata |
417 |
Q |
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| T |
25814682 |
tccctcaagcatccgtcaaagaaacaaaaagaaaaagttttcattgaaaataata |
25814736 |
T |
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