View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19193_low_22 (Length: 444)

Name: NF19193_low_22
Description: NF19193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19193_low_22
NF19193_low_22
[»] chr4 (40 HSPs)
chr4 (11-429)||(47244900-47245319)
chr4 (19-378)||(19102744-19103106)
chr4 (92-386)||(48275787-48276080)
chr4 (19-379)||(19107375-19107720)
chr4 (21-382)||(12875184-12875548)
chr4 (11-204)||(8029487-8029681)
chr4 (213-382)||(8029287-8029454)
chr4 (107-340)||(2820661-2820893)
chr4 (179-344)||(31274453-31274620)
chr4 (139-340)||(8694614-8694815)
chr4 (220-344)||(19907269-19907394)
chr4 (133-340)||(29349201-29349409)
chr4 (179-344)||(37263553-37263720)
chr4 (179-340)||(31728360-31728522)
chr4 (179-340)||(16421985-16422148)
chr4 (179-344)||(33467993-33468159)
chr4 (179-344)||(37258855-37259020)
chr4 (192-378)||(8028115-8028292)
chr4 (214-344)||(51698903-51699035)
chr4 (213-340)||(5270417-5270545)
chr4 (148-298)||(13064846-13064997)
chr4 (179-328)||(32220570-32220721)
chr4 (191-340)||(55252595-55252747)
chr4 (179-340)||(12822904-12823067)
chr4 (87-302)||(32081197-32081413)
chr4 (213-340)||(13060439-13060569)
chr4 (140-344)||(23094010-23094213)
chr4 (233-345)||(12878894-12879008)
chr4 (213-340)||(40408920-40409046)
chr4 (88-265)||(16948849-16949026)
chr4 (132-260)||(19907141-19907268)
chr4 (179-315)||(33462376-33462511)
chr4 (191-340)||(5925798-5925940)
chr4 (179-277)||(31766811-31766909)
chr4 (191-339)||(27183186-27183326)
chr4 (213-281)||(6943757-6943825)
chr4 (240-344)||(30054317-30054422)
chr4 (239-308)||(29985007-29985078)
chr4 (324-382)||(6138342-6138400)
chr4 (91-199)||(39216235-39216342)
[»] chr6 (24 HSPs)
chr6 (11-382)||(12689742-12690112)
chr6 (21-382)||(19674553-19674916)
chr6 (85-382)||(22610354-22610653)
chr6 (213-382)||(12797734-12797909)
chr6 (139-344)||(6406850-6407055)
chr6 (179-340)||(11533696-11533858)
chr6 (179-340)||(11559206-11559368)
chr6 (179-340)||(11569686-11569848)
chr6 (131-340)||(20747291-20747501)
chr6 (179-344)||(16835151-16835319)
chr6 (186-340)||(17963552-17963708)
chr6 (87-340)||(17600220-17600479)
chr6 (87-340)||(12405354-12405608)
chr6 (87-276)||(17914440-17914628)
chr6 (27-191)||(12799111-12799276)
chr6 (179-340)||(19994379-19994541)
chr6 (87-296)||(11612941-11613151)
chr6 (186-277)||(5856931-5857022)
chr6 (179-298)||(25313509-25313629)
chr6 (179-298)||(26201003-26201123)
chr6 (127-340)||(2699108-2699323)
chr6 (215-340)||(22694379-22694504)
chr6 (145-340)||(33686638-33686833)
chr6 (215-340)||(11428933-11429059)
[»] chr7 (31 HSPs)
chr7 (19-382)||(26286108-26286475)
chr7 (85-384)||(13313264-13313566)
chr7 (19-224)||(30258859-30259065)
chr7 (85-329)||(4580304-4580556)
chr7 (87-344)||(3046422-3046679)
chr7 (216-382)||(30259238-30259406)
chr7 (179-344)||(4931162-4931329)
chr7 (87-340)||(12256870-12257123)
chr7 (148-340)||(21672114-21672306)
chr7 (87-342)||(10392079-10392338)
chr7 (179-305)||(26342146-26342272)
chr7 (131-340)||(3880860-3881073)
chr7 (179-340)||(42625572-42625740)
chr7 (183-277)||(12181811-12181905)
chr7 (213-339)||(23247554-23247681)
chr7 (87-334)||(15973571-15973819)
chr7 (234-340)||(44508290-44508398)
chr7 (131-270)||(9814941-9815080)
chr7 (131-270)||(10716866-10717005)
chr7 (244-340)||(2595774-2595872)
chr7 (220-337)||(23151683-23151804)
chr7 (87-250)||(6590099-6590261)
chr7 (252-340)||(12802295-12802384)
chr7 (127-255)||(12800278-12800405)
chr7 (87-230)||(10674447-10674593)
chr7 (136-256)||(16373245-16373364)
chr7 (90-192)||(15643144-15643246)
chr7 (325-386)||(4582304-4582364)
chr7 (19-61)||(4580244-4580287)
chr7 (87-268)||(10387417-10387599)
chr7 (132-270)||(27246614-27246749)
[»] chr1 (19 HSPs)
chr1 (11-382)||(16036376-16036750)
chr1 (11-382)||(23191791-23192165)
chr1 (11-370)||(40166720-40167072)
chr1 (19-382)||(12260754-12261119)
chr1 (115-382)||(39586034-39586299)
chr1 (179-340)||(10136264-10136427)
chr1 (179-344)||(25844695-25844862)
chr1 (139-333)||(51040522-51040716)
chr1 (179-315)||(16648648-16648787)
chr1 (179-315)||(19798012-19798152)
chr1 (233-382)||(46697308-46697458)
chr1 (139-303)||(11807119-11807284)
chr1 (186-340)||(38622135-38622291)
chr1 (324-384)||(16038859-16038919)
chr1 (19-118)||(39587589-39587689)
chr1 (87-204)||(46697180-46697299)
chr1 (179-270)||(26926784-26926877)
chr1 (249-328)||(8138602-8138682)
chr1 (240-296)||(39199805-39199863)
[»] chr2 (33 HSPs)
chr2 (19-382)||(28603864-28604229)
chr2 (19-382)||(42925628-42925988)
chr2 (85-387)||(31328907-31329211)
chr2 (85-387)||(31335628-31335932)
chr2 (13-333)||(44630448-44630775)
chr2 (87-382)||(15446235-15446532)
chr2 (145-340)||(29678584-29678780)
chr2 (179-340)||(25496378-25496541)
chr2 (179-344)||(30651853-30652020)
chr2 (179-340)||(12797868-12798032)
chr2 (213-340)||(18345389-18345518)
chr2 (213-340)||(17974345-17974473)
chr2 (213-340)||(17967958-17968086)
chr2 (179-340)||(25477283-25477446)
chr2 (179-340)||(9179720-9179884)
chr2 (179-340)||(9184411-9184575)
chr2 (186-340)||(12361195-12361347)
chr2 (152-303)||(24537054-24537206)
chr2 (87-294)||(40846622-40846830)
chr2 (179-340)||(19891501-19891662)
chr2 (213-340)||(19896923-19897050)
chr2 (217-340)||(20101644-20101769)
chr2 (87-270)||(12001965-12002153)
chr2 (253-344)||(1933999-1934092)
chr2 (90-298)||(25637801-25638009)
chr2 (113-356)||(32080250-32080496)
chr2 (87-199)||(19577741-19577852)
chr2 (19-53)||(31327515-31327549)
chr2 (19-53)||(31334236-31334270)
chr2 (329-382)||(7736652-7736706)
chr2 (87-177)||(23853573-23853663)
chr2 (104-172)||(27414293-27414361)
chr2 (191-259)||(34495183-34495251)
[»] chr5 (33 HSPs)
chr5 (21-382)||(35678850-35679214)
chr5 (19-382)||(9725725-9726084)
chr5 (19-381)||(4872665-4873025)
chr5 (87-382)||(17162704-17163001)
chr5 (179-344)||(37247789-37247956)
chr5 (179-337)||(6154429-6154589)
chr5 (179-340)||(26668217-26668380)
chr5 (179-340)||(26939814-26939977)
chr5 (179-340)||(29166967-29167130)
chr5 (87-313)||(17159223-17159452)
chr5 (87-356)||(23688916-23689189)
chr5 (213-340)||(7452728-7452857)
chr5 (179-340)||(10759356-10759518)
chr5 (179-340)||(37536931-37537095)
chr5 (213-322)||(6511615-6511726)
chr5 (90-340)||(20180149-20180395)
chr5 (179-340)||(37646049-37646214)
chr5 (213-340)||(36424611-36424740)
chr5 (213-294)||(40148816-40148897)
chr5 (213-322)||(36430491-36430602)
chr5 (254-387)||(22832453-22832587)
chr5 (112-303)||(15149537-15149727)
chr5 (191-282)||(12104005-12104096)
chr5 (247-344)||(39519392-39519491)
chr5 (239-340)||(23757158-23757261)
chr5 (239-340)||(23822614-23822717)
chr5 (247-344)||(39524031-39524130)
chr5 (186-268)||(40567670-40567752)
chr5 (87-199)||(22832656-22832767)
chr5 (87-174)||(15413853-15413940)
chr5 (346-388)||(16115156-16115198)
chr5 (286-340)||(40150243-40150297)
chr5 (213-270)||(16115295-16115352)
[»] chr3 (24 HSPs)
chr3 (22-382)||(29351008-29351372)
chr3 (11-382)||(3656209-3656585)
chr3 (85-382)||(2206784-2207073)
chr3 (179-340)||(18472945-18473108)
chr3 (139-340)||(20520861-20521063)
chr3 (179-344)||(7570205-7570372)
chr3 (179-344)||(23660479-23660646)
chr3 (179-344)||(23665111-23665278)
chr3 (87-340)||(46964861-46965114)
chr3 (191-340)||(55326728-55326878)
chr3 (260-382)||(38891137-38891260)
chr3 (179-340)||(14437687-14437847)
chr3 (179-340)||(757358-757520)
chr3 (179-340)||(18468151-18468314)
chr3 (139-340)||(12970802-12971006)
chr3 (146-345)||(55432134-55432331)
chr3 (215-344)||(20175368-20175496)
chr3 (179-303)||(27709870-27709993)
chr3 (139-338)||(12964879-12965079)
chr3 (179-270)||(39774891-39774982)
chr3 (149-303)||(12111623-12111771)
chr3 (218-328)||(7860686-7860798)
chr3 (214-341)||(3426047-3426173)
chr3 (14-61)||(2207087-2207135)
[»] scaffold0054 (2 HSPs)
scaffold0054 (24-382)||(26224-26585)
scaffold0054 (90-340)||(30028-30279)
[»] scaffold0011 (1 HSPs)
scaffold0011 (217-382)||(64847-65013)
[»] chr8 (24 HSPs)
chr8 (85-321)||(17953160-17953392)
chr8 (87-340)||(1808299-1808552)
chr8 (87-344)||(7002494-7002751)
chr8 (179-337)||(38181279-38181439)
chr8 (179-344)||(40124884-40125051)
chr8 (87-340)||(18875379-18875633)
chr8 (146-340)||(44924915-44925110)
chr8 (179-315)||(15950591-15950729)
chr8 (179-307)||(33417469-33417599)
chr8 (92-341)||(26779957-26780206)
chr8 (213-340)||(1909941-1910070)
chr8 (170-292)||(28559158-28559281)
chr8 (213-340)||(2966558-2966687)
chr8 (170-340)||(28564292-28564460)
chr8 (227-315)||(17021243-17021332)
chr8 (227-315)||(17551680-17551769)
chr8 (87-291)||(24672364-24672567)
chr8 (25-189)||(28864080-28864245)
chr8 (332-382)||(4097304-4097354)
chr8 (276-317)||(17798085-17798126)
chr8 (339-382)||(15874991-15875034)
chr8 (330-367)||(28864664-28864701)
chr8 (213-266)||(31440201-31440254)
chr8 (157-237)||(23547703-23547782)
[»] scaffold0002 (2 HSPs)
scaffold0002 (179-344)||(5003-5170)
scaffold0002 (179-340)||(442934-443096)
[»] scaffold0057 (1 HSPs)
scaffold0057 (145-344)||(36028-36227)
[»] scaffold0352 (1 HSPs)
scaffold0352 (213-340)||(8082-8211)
[»] scaffold0690 (1 HSPs)
scaffold0690 (87-337)||(6080-6331)
[»] scaffold0009 (1 HSPs)
scaffold0009 (11-153)||(147587-147730)
[»] scaffold0240 (1 HSPs)
scaffold0240 (140-344)||(4872-5075)


Alignment Details
Target: chr4 (Bit Score: 307; Significance: 1e-173; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 11 - 429
Target Start/End: Original strand, 47244900 - 47245319
Alignment:
Q  11 cacagataagctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattc 109  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||        ||||||||||||  |||| ||||||    
T  47244900 cacagataagctcaagtaacaaactaatcggataagttcaaaaagaaacaaatccacaagattagcttaaacaaactaatgaaggaagtataggaaattc 47244999  T
Q  110 agttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtc 209  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||| ||    
T  47245000 agttggattctcaatcatatcacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaattataattataattattttcatcaatatc 47245099  T
Q  210 agttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaatactag 309  Q
    ||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||| ||||| || |||  ||||||||||||||||||||||||||    
T  47245100 agttatttaaaattaaatatcgctatttaaacactaataatgtgtgtgttctattttatttaggatccccacactattttttcaattcacacaatactag 47245199  T
Q  310 atcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaatacatatagtatatagttttcatactt 409  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  47245200 atcaaactttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaacacatatagtatatagttttcatattt 47245299  T
Q  410 gctggatgctaccatagttc 429  Q
    ||||||||||||||||||||    
T  47245300 gctggatgctaccatagttc 47245319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 19 - 378
Target Start/End: Original strand, 19102744 - 19103106
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    |||||||||||||||| ||| ||||||||||||||  ||||||| |||||||||||| ||       |||||||||||||||||||||||||||||||||    
T  19102744 agctcaagtaacaaacgaataggataagttcaaaaagaaacaaacccacaagattagatgaaacaaactaatgaaggaaagatagaaaattcagttggat 19102843  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| ||||||||||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||||||||||||||||| | |||| |||||    
T  19102844 tctcaatcttatcacaacaaacataacctaaaattatgagaagtgatatccatgattaaagaataataattattattattttcatcattatcaggtattt 19102943  T
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatactagatcaaa 315  Q
    ||||||||||| | |||||| ||||||| |||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||| |||||||||||    
T  19102944 aaaattaaatatcactatttaaacactattaatgtgtgtgttctattttatgtgggacctccacactctattttttcaattcacacaacactagatcaaa 19103043  T
Q  316 atttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgtt 378  Q
     ||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||||||||    
T  19103044 gtttaataacttggagtttaatcttccaaccgtccaatttctttccatcttcacaccaatgtt 19103106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 92 - 386
Target Start/End: Complemental strand, 48276080 - 48275787
Alignment:
Q  92 aggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattatt 191  Q
    ||||||||||| | |||||||||||||||||||| ||| || |||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||||    
T  48276080 aggaaagataggacattcagttggattctcaatcttatcacgacaaacataacctaaaattacgggaagtgatatctatgaataaacaataataattatt 48275981  T
Q  192 attattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactttatttt 289  Q
    ||||||||||||| | | |  ||||||||| |||||||| |||||| |||||| |||  ||||||||| |||||||| | ||||||  ||||| ||||||    
T  48275980 attattttcatcattattaagtatttaaaaataaataccactatttaaacactgcta--gtgtgtgttatattttatat-ggacccccacactctatttt 48275884  T
Q  290 ttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaataca 386  Q
    |||||||||||||| || |||||||| |||||||||||  ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  48275883 ttcaattcacacaacacaagatcaaagtttaataacttgatgtttaatcttccaaccttccaatttctttccgtcttcacaccaatgttccaataca 48275787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 19 - 379
Target Start/End: Original strand, 19107375 - 19107720
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    |||||||||||||||||||||||||||||||||||  ||||||| ||||| |||||| ||       |||||||||||||||||| ||||||||||||||    
T  19107375 agctcaagtaacaaactaatcggataagttcaaaaagaaacaaacccacatgattagatgaaacaaactaatgaaggaaagataggaaattcagttggat 19107474  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| ||                   |||| ||| ||||||| | |||||| ||||||| ||||||||||||||||||| | |||| |||||    
T  19107475 tctcaatcttatcacg------------------tatgagaagtgatatcaaagaataa-gaataataattattattattttcatcattatcaggtattt 19107555  T
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatac-tagatcaa 314  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||  ||||||| ||| ||||||||||||||||||| ||||||||    
T  19107556 aaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacctccacactctatattttcaattcacacaatacttagatcaa 19107655  T
Q  315 aatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttc 379  Q
    | ||||||||||| |||||||||||| |||||||||||||| |||||| | ||||||||||||||    
T  19107656 agtttaataacttggtgtttaatcttccaaccttccaatttatttccagcatcacaccaatgttc 19107720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 21 - 382
Target Start/End: Original strand, 12875184 - 12875548
Alignment:
Q  21 ctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggattc 119  Q
    |||||||||||||||||||||||||||||||||  ||||||| ||  || ||||| |        |||||||||||||||||| |||||||| || ||||    
T  12875184 ctcaagtaacaaactaatcggataagttcaaaaagaaacaaaccctaaaaattagattaaacaaactaatgaaggaaagataggaaattcagctgcattc 12875283  T
Q  120 tcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaa 219  Q
    |||||  ||| ||||| ||||||||||||||||||||||| ||||||  |||| |||| |||||| |||| |||||| || |||| | |||  |||||||    
T  12875284 tcaatgttatcacaaccaacataacctaaaattatgggaagtgatattcatgagtaaaaaataataattactattatgtttatcattatcaaatatttaa 12875383  T
Q  220 aattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaat 317  Q
    ||| ||||||| |||||| || | |||||||||||| ||||||||||||| ||||  |||||||| |||||||||||||||||||| ||||||| ||| |    
T  12875384 aatcaaataccactatttaaatattactaatgtgtgggttctattttatgcaggacccccacactctattttttcaattcacacaacactagatgaaagt 12875483  T
Q  318 ttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
     |||| |||| ||||||||||||  ||| |||||||||| ||||| | |||||||||||||||||    
T  12875484 ctaattacttggtgtttaatcttctaactttccaatttccttccaacatcacaccaatgttccaa 12875548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 11 - 204
Target Start/End: Complemental strand, 8029681 - 8029487
Alignment:
Q  11 cacagataagctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattc 109  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||  ||||||| ||||||||||||||        ||||||||||||| |||  ||||||    
T  8029681 cacagatcagctcaagtaacacactaatcagataagttcaaaaagaaacaaacccacaagattagcttaaacaaactaatgaaggaaacataagaaattc 8029582  T
Q  110 agttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatca 204  Q
    ||||| |||||||||| |||| ||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  8029581 agttgaattctcaatcttattgcaacaaacataacctaagattatgggaagtgatatccatgaataaagaataattattattattattttcatca 8029487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 213 - 382
Target Start/End: Complemental strand, 8029454 - 8029287
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactaga 310  Q
    |||||||||||||||||| |||| | ||||||     ||||||||||||||||||||| ||||||  ||||| |||||||||||||||||||||||||||    
T  8029454 tatttaaaattaaataccactatgtaaacactg----tgtgtgtgttctattttatgtgggacccccacactctattttttcaattcacacaatactaga 8029359  T
Q  311 tcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||| |||||| |||| ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  8029358 tcaaagtttaattacttggtgtttaatcttctaaccttctaatttctttccatcttcacaccaatgttccaa 8029287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 107 - 340
Target Start/End: Original strand, 2820661 - 2820893
Alignment:
Q  107 ttcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaat 206  Q
    |||||||  ||||| |||| ||| ||||| ||||||| ||||| ||||||||| ||||||  |  |||||| |||||| |||| ||||||||| |||| |    
T  2820661 ttcagttccattcttaatcttatcacaaccaacataagctaaatttatgggaagtgatattcac-aataaa-aataataattactattatttttatcatt 2820758  T
Q  207 gtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaat 304  Q
     |||  || ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||  |||||||| || |||||||||||||||||     
T  2820759 atcaaataattaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctaatttttcaattcacacaac 2820858  T
Q  305 actagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||| |||| |||| |||| ||||||||||||    
T  2820859 actagatc-aaatataattacttggtgtttaatctt 2820893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 31274453 - 31274620
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| |||||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||  |||  ||    
T  31274453 aataataattactattatttttatcactgtcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccc 31274552  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  31274553 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 31274620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 139 - 340
Target Start/End: Original strand, 8694614 - 8694815
Alignment:
Q  139 cataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctatttt 238  Q
    ||||||||||| |||||| || ||||||    |||||||  ||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | ||||     
T  8694614 cataacctaaatttatggaaagtgatattctcgaataaa--ataataattactattatttttatcattatcaagtatttaaaattaaataccacaattta 8694711  T
Q  239 aacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaa 336  Q
    |||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||    
T  8694712 aacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaa 8694811  T
Q  337 tctt 340  Q
    ||||    
T  8694812 tctt 8694815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 220 - 344
Target Start/End: Original strand, 19907269 - 19907394
Alignment:
Q  220 aattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc-acactttattttttcaattcacacaatactagatcaaaatt 318  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||| |||||||||||||     
T  19907269 aattaaataccgcaatttaaacactgctaatgtgtgtgttctattttatgtgagaccccacactttattttttcaattcacacaacactagatcaaaata 19907368  T
Q  319 taataacttagtgtttaatctttcaa 344  Q
    |||| |||| ||||||||||||||||    
T  19907369 taattacttggtgtttaatctttcaa 19907394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 133 - 340
Target Start/End: Complemental strand, 29349409 - 29349201
Alignment:
Q  133 aacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttc-atcaatgtcagttatttaaaattaaataccg 231  Q
    ||||| ||||| ||||| ||||||||||||||||  | ||||||| |||||| |||| |||||||||  |||| | ||   |||||||||||||||||||    
T  29349409 aacaaccataagctaaatttatgggaaatgatattcacgaataaaaaataataattaatattattttttatcattatccagtatttaaaattaaataccg 29349310  T
Q  232 ctattttaacactactaatgtgtgtgttctattttatgtaggacc-cacactttattttttcaattcacacaatactagatcaaaatttaataacttagt 330  Q
    | |||| |||||| |||||||||| |||||||||||||| ||||| |||||| |||||||||||||||| ||| |||| |||||| | |||| |||||||    
T  29349309 caatttaaacactgctaatgtgtgagttctattttatgtgggacctcacactctattttttcaattcactcaacacta-atcaaagtataattacttagt 29349211  T
Q  331 gtttaatctt 340  Q
    ||||||||||    
T  29349210 gtttaatctt 29349201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 37263720 - 37263553
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||  |||  ||    
T  37263720 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccc 37263621  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  37263620 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 37263553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 31728522 - 31728360
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-ccc 277  Q
    |||||| |||| ||||||||| |||| | | |  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| ||| |||    
T  31728522 aataataattactattatttttatcattatgaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 31728423  T
Q  278 acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  31728422 acactctattttttcaattcacacaacattagatcaaattataattacttggtgtttaatctt 31728360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 16421985 - 16422148
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||| |||  ||    
T  16421985 aataataattactattatttttatcattatcaagtattgaaaattaaataccgcaatttaaacactactaatgcgtgtgttctattttatgtgggacccc 16422084  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  16422085 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctt 16422148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 33468159 - 33467993
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagg-accc 277  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||  | |||| |||||||||||||||||||||||||||||||| || |||     
T  33468159 aataataattactattatttttatcattatcaagtatttaaaattaaatactacaatttaaacactactaatgtgtgtgttctattttatgtgggaacct 33468060  T
Q  278 acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    ||||| ||||||||||||| |||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  33468059 acactctattttttcaatttacacaacattagatcaaagtataattacttggtgtttaatctttcaa 33467993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 37259020 - 37258855
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||  |||  ||    
T  37259020 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccc 37258921  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | |||||||||   |||| |||| ||||||||||||||||    
T  37258920 cacactctattttttcaattcacacaacattagatcaaa--gtaattacttggtgtttaatctttcaa 37258855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 192 - 378
Target Start/End: Complemental strand, 8028292 - 8028115
Alignment:
Q  192 attattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttatttttt 291  Q
    |||||||| |||| | | ||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||     |  ||||| ||||||||    
T  8028292 attatttttatcattattagttatttaaaattaaatacaactatttaaacactactaatgtgtgtgttctattttatg-----cttacactctatttttt 8028198  T
Q  292 caattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgtt 378  Q
    |||||||||||| | | ||||||| |||||| |||   ||||||||||| ||||||||| |||||||| |||||||||| |||||||    
T  8028197 caattcacacaacattcgatcaaagtttaattact---tgtttaatcttccaaccttcc-atttcttttcatcttcacatcaatgtt 8028115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 214 - 344
Target Start/End: Original strand, 51698903 - 51699035
Alignment:
Q  214 atttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagat 311  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||| ||| | ||| |    
T  51698903 atttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattcacgcaacattagtt 51699002  T
Q  312 caaaatttaataacttagtgtttaatctttcaa 344  Q
    |||| | |||| | || ||||||||||||||||    
T  51699003 caaagtataattatttggtgtttaatctttcaa 51699035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 340
Target Start/End: Complemental strand, 5270545 - 5270417
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-cccacactttattttttcaattcacacaatactagat 311  Q
    |||||||||||||||||| | |||| || ||||||||||||||||||||||||||||| ||| |||||| | |||||||||||||||||||| | |||||    
T  5270545 tatttaaaattaaataccacaatttaaatactactaatgtgtgtgttctattttatgtgggaccccacattctattttttcaattcacacaacattagat 5270446  T
Q  312 caaaatttaataacttagtgtttaatctt 340  Q
    |||| | |||| |||| ||||||||||||    
T  5270445 caaagtataattacttggtgtttaatctt 5270417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 148 - 298
Target Start/End: Complemental strand, 13064997 - 13064846
Alignment:
Q  148 aaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactact 247  Q
    |||||||||||| ||||||  | ||||||| |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| ||||||| |    
T  13064997 aaattatgggaagtgatattcacgaataaa-aataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactatt 13064899  T
Q  248 aatgtgtgtgttctattttatgtagga--cccacactttattttttcaattca 298  Q
     |||||||||||||||||||||| |||  |||||||| |||||||||||||||    
T  13064898 gatgtgtgtgttctattttatgtgggacccccacactctattttttcaattca 13064846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 328
Target Start/End: Complemental strand, 32220721 - 32220570
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||| ||  |||| ||||||| |||||||| ||||||||||||||| |||  ||    
T  32220721 aataataattactattatttttatcattatcaaatatttaaaattaaatatcggaatttaaacactaataatgtgtatgttctattttatgtgggacccc 32220622  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataactta 328  Q
    |||||| |||||||| ||||||||||||| ||||||||||| |||| |||||    
T  32220621 cacactctatttttttaattcacacaatattagatcaaaatataattactta 32220570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 191 - 340
Target Start/End: Original strand, 55252595 - 55252747
Alignment:
Q  191 tattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacacttta-tt 287  Q
    ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||  ||||||| || ||    
T  55252595 tattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccaccacactctattt 55252694  T
Q  288 ttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||| | || |||||| | |||| ||||  |||||| ||||    
T  55252695 ttttcaattcacacaacattaaatcaaagtataattacttgatgtttagtctt 55252747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 12823067 - 12822904
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | | |  |||||||||||||||||| |  ||| ||||||||||||||||| |||||||||||||| |||  ||    
T  12823067 aataataattactattatttttatcattataaagtatttaaaattaaataccacagtttaaacactactaatgtgtgagttctattttatgtgggacccc 12822968  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| | || |||||| |||||    
T  12822967 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttgatctt 12822904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 87 - 302
Target Start/End: Complemental strand, 32081413 - 32081197
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||| ||| ||| |||||||| ||  ||||| | || ||| ||||| | ||||| ||||| ||||||||| ||||||    ||||||| |||||| |    
T  32081413 aatgaagaaaatataaaaaattcaattaaattcttattcttatcacaaccaccataagctaaatttatgggaagtgatattctcgaataaa-aataataa 32081315  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacacttt 284  Q
    ||| ||||||||| || | | |||  |||||||||||||||| | | |||| ||||||||||||||||| ||||||||||| || ||||  ||||||| |    
T  32081314 ttactattatttttataattatcaagtatttaaaattaaatatcacaatttaaacactactaatgtgtgagttctattttacgtgggacctccacactct 32081215  T
Q  285 attttttcaattcacaca 302  Q
    ||||||||||||||||||    
T  32081214 attttttcaattcacaca 32081197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 13060439 - 13060569
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacacttta-ttttttcaattcacacaatactag 309  Q
    |||||||||||||||||||| |||| |||||||| |||||||| ||||| ||||||||  |||  ||||||| || |||||||||||||||||||| |||    
T  13060439 tatttaaaattaaataccgcaatttaaacactaccaatgtgtgagttcttttttatgtgtgaccaccacactctatttttttcaattcacacaatattag 13060538  T
Q  310 atcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| | |||| |||| | ||||||||||    
T  13060539 atcaaagtataattacttggggtttaatctt 13060569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 344
Target Start/End: Original strand, 23094010 - 23094213
Alignment:
Q  140 ataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctatttta 239  Q
    |||| ||||| ||| | ||| |||||||||| |||||| |||||| |||| ||||||||| |||| | |||  |||||||||||||||  ||  |||| |    
T  23094010 ataagctaaatttacgagaagtgatatctataaataaa-aataataattactattatttttatcattatcaagtatttaaaattaaatctcgtaatttaa 23094108  T
Q  240 acactactaatgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatct 339  Q
     ||||||||||||||||||| |||||||||| |  ||||| || ||||||||||||||| |  | | ||| ||||| | ||||  ||| |||||||||||    
T  23094109 tcactactaatgtgtgtgttttattttatgtggaccccactctctattttttcaattcatatcacattagctcaaattctaattccttggtgtttaatct 23094208  T
Q  340 ttcaa 344  Q
    |||||    
T  23094209 ttcaa 23094213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 233 - 345
Target Start/End: Original strand, 12878894 - 12879008
Alignment:
Q  233 tattttaacactactaatgtgtgtgttctattttatgtaggacccac--actttattttttcaattcacacaatactagatcaaaatttaataacttagt 330  Q
    ||||| ||||||| |||||||| ||||||||||||||| ||| || |  ||| |||||||||||||||||||| ||||||| ||| | || | |||||||    
T  12878894 tatttaaacactattaatgtgtatgttctattttatgtgggatcctcttactctattttttcaattcacacaacactagatgaaagtctatttacttagt 12878993  T
Q  331 gtttaatctttcaac 345  Q
    |||||||||||||||    
T  12878994 gtttaatctttcaac 12879008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 40408920 - 40409046
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaatactagatc 312  Q
    |||||||||||||||||||| |||| ||||||| |||| ||||||||||||||||| | | |||| |||  |||||||| |||||| |||| | ||||||    
T  40408920 tatttaaaattaaataccgcaatttaaacactaataatatgtgtgttctattttatttggtaccc-cacactatttttttaattcatacaacattagatc 40409018  T
Q  313 aaaatttaataacttagtgtttaatctt 340  Q
    ||| | |||| | |||||||||||||||    
T  40409019 aaagtataatcatttagtgtttaatctt 40409046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 88 - 265
Target Start/End: Original strand, 16948849 - 16949026
Alignment:
Q  88 atgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattat 187  Q
    |||||||| | |||| ||| |||||| ||||||||||| ||| | ||| ||||||| ||||||||||||||||||||||| |||| |||| | |||| ||    
T  16948849 atgaaggagatataggaaactcagttcgattctcaatcttatcataaccaacataagctaaaattatgggaaatgatatcaatgagtaaa-actaataat 16948947  T
Q  188 tattatt-attttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattt 265  Q
    || ||||  |||| |||| | |||  |||| |||| |||||||    |||| |||||||||||| ||||||||||||||    
T  16948948 tactattcttttttatcattatcaagtattcaaaactaaatacaagaatttgaacactactaatatgtgtgttctattt 16949026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 260
Target Start/End: Original strand, 19907141 - 19907268
Alignment:
Q  132 caacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccg 231  Q
    |||||| ||||| ||||| ||||||||| ||||||  | ||||||| |||||| |||  ||||||||| ||||   |||  |||||||||||||||||||    
T  19907141 caacaatcataagctaaatttatgggaagtgatattcacgaataaa-aataataatttctattatttttatcatcatcaagtatttaaaattaaataccg 19907239  T
Q  232 ctattttaacactactaatgtgtgtgttc 260  Q
    | |||| |||||| |||||||||||||||    
T  19907240 caatttaaacactgctaatgtgtgtgttc 19907268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 33462511 - 33462376
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc-- 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||| || || |||| |||||||||||||||||| ||  ||||||| | |||||      
T  33462511 aataataattactattatttttatcattatcaagtatttaaaattaaacactgcaatttaaacactactaatgtgtgtctt--attttat-tgggacctc 33462415  T
Q  277 cacactttattttttcaattcacacaatactagatcaaa 315  Q
    |||||| |||||||||||||||||||| | |||||||||    
T  33462414 cacactctattttttcaattcacacaacattagatcaaa 33462376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 191 - 340
Target Start/End: Complemental strand, 5925940 - 5925798
Alignment:
Q  191 tattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttt 290  Q
    ||||||||| |||| | |||  ||||||||||||||||||   |||| ||||||||||||||  |||||||||||||||| |||||| |     ||||||    
T  5925940 tattatttttatcattatcaagtatttaaaattaaataccataatttaaacactactaatgt--gtgttctattttatgtgggaccccc-----attttt 5925848  T
Q  291 tcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||||||||| | || |||||| | |||| |||| || |||||||||    
T  5925847 tcaattcacacaacattatatcaaagtataattacttggtatttaatctt 5925798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 277
Target Start/End: Original strand, 31766811 - 31766909
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaa-ttaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc 277  Q
    |||||| |||| ||||||||| |||| | |||  ||||||||| ||||||||| | |||| ||||||| |||||||||||||||||||||||| ||||||    
T  31766811 aataataattactattatttttatcattatcaagtatttaaaaattaaataccacaattt-aacactattaatgtgtgtgttctattttatgtgggaccc 31766909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 339
Target Start/End: Original strand, 27183186 - 27183326
Alignment:
Q  191 tattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttt 290  Q
    ||||||||| |||| | |||  ||||||||||||||||||   |||| |||||||||||  ||||||||||||||||||| |||||| ||      ||||    
T  27183186 tattatttttatcattatcaagtatttaaaattaaataccataatttaaacactactaa--tgtgtgttctattttatgtgggaccccca------tttt 27183277  T
Q  291 tcaattcacacaatactagatcaaaatttaataacttagtgtttaatct 339  Q
    ||||||||||||| | || |||||| | |||| |||| || ||||||||    
T  27183278 tcaattcacacaacattatatcaaagtataattacttggtatttaatct 27183326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 281
Target Start/End: Original strand, 6943757 - 6943825
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacac 281  Q
    ||||| ||||||||||| || |||| |||| ||||||||| ||||||||||||||||| |||| |||||    
T  6943757 tatttgaaattaaatacagcaatttaaacattactaatgtatgtgttctattttatgtgggactcacac 6943825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 344
Target Start/End: Complemental strand, 30054422 - 30054317
Alignment:
Q  240 acactactaatgtgtgtgttctattttatgtagga-cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatc 338  Q
    ||||| |||| |||||||||||| | ||||||||| ||||| || |||||||||||||| ||  ||||||  ||||| | | |  |||||||||||||||    
T  30054422 acactgctaaagtgtgtgttctaatatatgtaggaccccactctctattttttcaattcgcatcatactaactcaaagtcttactacttagtgtttaatc 30054323  T
Q  339 tttcaa 344  Q
    ||||||    
T  30054322 tttcaa 30054317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 29985078 - 29985007
Alignment:
Q  239 aacactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatacta 308  Q
    |||||||||||| ||| || ||||||||| || ||||  ||||||| |||||||||||||||||||| ||||    
T  29985078 aacactactaatttgtttgctctattttacgtgggacatccacactctattttttcaattcacacaacacta 29985007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 382
Target Start/End: Original strand, 6138342 - 6138400
Alignment:
Q  324 acttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||| |||||||||||||||| ||| |||||| |||||  |||||||||| |||||||    
T  6138342 acttaatgtttaatctttcaacattcaaatttccttccaatttcacaccaacgttccaa 6138400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 39216342 - 39216235
Alignment:
Q  91 aaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattat 190  Q
    |||||||||||||||| ||| ||| ||||| | || ||| ||||| |||||||  |||| ||||| ||| ||||||  | ||||||| |||||| ||||     
T  39216342 aaggaaagatagaaaactcaattgaattcttattcttatcacaaccaacataagataaatttatgcgaagtgatatacacgaataaa-aataataattac 39216244  T
Q  191 tattatttt 199  Q
    |||||||||    
T  39216243 tattatttt 39216235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 243; Significance: 1e-134; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 11 - 382
Target Start/End: Original strand, 12689742 - 12690112
Alignment:
Q  11 cacagataagctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattc 109  Q
    |||||||||||||||||| |||||||||| |||||||| ||||  |||||||||||||||||||||||       |||||||||||||||||| || |||    
T  12689742 cacagataagctcaagtatcaaactaatcagataagttaaaaaagaaacaaatccacaagattagctgaaacaaactaatgaaggaaagataggaatttc 12689841  T
Q  110 agttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtc 209  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||   ||||||||||||||||||||| ||    
T  12689842 agttggattctcaatcatatcacaacaaacataacctaaaattatgggaagtgatatccataaataaagaata---attattattattttcatcaatatc 12689938  T
Q  210 agttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac-ccacactttattttttcaattcacacaatacta 308  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||    
T  12689939 agttatttaaaattaaataccgctatttaaacactactaatgtgtgtgttctattttatgtgggactccacactctattttttcaattcacacaacacta 12690038  T
Q  309 gatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||||| |||||||| || ||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  12690039 gatcaaagtttaataatttggtgtttaattttccaaccttccaatttctttccatcttcacaccaatgttccaa 12690112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 21 - 382
Target Start/End: Original strand, 19674553 - 19674916
Alignment:
Q  21 ctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggattc 119  Q
    ||||||| |||||||| ||||||||||||||||  ||||||| | ||||||||||||        |||||||||||||||||| ||||||||||||||||    
T  19674553 ctcaagttacaaactattcggataagttcaaaaagaaacaaacctacaagattagcttaaacaaactaatgaaggaaagataggaaattcagttggattc 19674652  T
Q  120 tcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaa 219  Q
    |||||| ||| | ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||  ||||||||||||||| | | || |||||||    
T  19674653 tcaatcttatcaaaacaaacataacctaaaattatgggaagtgatatccatgaataaagaataataatatttattattttcatcattattaggtatttaa 19674752  T
Q  220 aattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttatttttt-caattcacacaatactagatcaaaatt 318  Q
    ||||||||| |  ||||| ||||||||| |||||||||||||||||||||| |||||| |||  |||||||| |||||||||||| ||||||||||| ||    
T  19674753 aattaaatatcattatttaaacactactgatgtgtgtgttctattttatgtcggacccccacactattttttccaattcacacaacactagatcaaagtt 19674852  T
Q  319 taataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    |||| | || ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  19674853 taattatttggtgtttaatctttcaaccttccaatttatttccatcttcacaccattgttccaa 19674916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 85 - 382
Target Start/End: Original strand, 22610354 - 22610653
Alignment:
Q  85 ctaatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatct--atgaataaagaata 182  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||| ||||||||||||| | |||||| |  |||| |||  ||||    
T  22610354 ctaatgaaggaaagatagaaaattcagttagattctcaatcttattgcaaccaacataaactaaaattatgggtagtgatatattcatgagtaataaata 22610453  T
Q  183 attattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccaca 280  Q
    || ||||  |||||||| |||| | |||  ||||||||||||||||||   |||| ||||||||||||||||||||| |||||||||| | ||  |||||    
T  22610454 ataattacaattatttttatcattatcaagtatttaaaattaaataccaaaatttaaacactactaatgtgtgtgttttattttatgtggaactgccaca 22610553  T
Q  281 ctttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttcc 380  Q
     | ||||||||||||  |||||| | ||||||||| | |||| |||| || |||||||||  |||||||||||||| |||   |||||||||||||||||    
T  22610554 atctattttttcaat--acacaacaatagatcaaagtctaattacttggtatttaatcttctaaccttccaatttccttctgacttcacaccaatgttcc 22610651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 213 - 382
Target Start/End: Complemental strand, 12797909 - 12797734
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgt----tctattttatgtaggacccacac--tttattttttcaattcacacaatac 306  Q
    |||||||||||||||||| |||||| |||||||||| |||||||||    |||||||||||| ||||||||||  | |||||||||||||||||||| ||    
T  12797909 tatttaaaattaaataccactatttaaacactactagtgtgtgtgtgttttctattttatgtgggacccacacactctattttttcaattcacacaacac 12797810  T
Q  307 tagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||||||| | |||| |||| |||||||||||| ||||||| ||||||| ||||| |||||||||||| ||||||    
T  12797809 tagatcaaagtctaattacttggtgtttaatcttccaacctttcaatttccttccaacttcacaccaatattccaa 12797734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 139 - 344
Target Start/End: Complemental strand, 6407055 - 6406850
Alignment:
Q  139 cataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctatttt 238  Q
    ||||| ||||| |||||| |||||||||    |||||||  ||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | ||||     
T  6407055 cataagctaaatttatggaaaatgatattctcgaataaa--ataataattactattatttttatcattatcaagtatttaaaattaaataccacaattta 6406958  T
Q  239 aacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaa 336  Q
    ||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||    
T  6406957 aacactactaatgtgtgtgttctattttatgcaggacccccacactctattttttcaattcacacaacaatagatcaaagtataattacttggtgtttaa 6406858  T
Q  337 tctttcaa 344  Q
    ||||||||    
T  6406857 tctttcaa 6406850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 11533858 - 11533696
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-ccc 277  Q
    |||||| ||||  |||||||| |||| | |||  |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||| |||    
T  11533858 aataataattacaattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgtgttctattttatgtgggacccc 11533759  T
Q  278 acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  11533758 acactttattttttcaattcacacaacattagatcaaactataattacttggtgtttaatctt 11533696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 11559368 - 11559206
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-ccc 277  Q
    |||||| ||||  |||||||| |||| | |||  |||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||| ||| |||    
T  11559368 aataataattacaattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgtgttctattttatgtgggacccc 11559269  T
Q  278 acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  11559268 acactgtattttttcaattcacacaacattagatcaaactataattacttggtgtttaatctt 11559206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 11569848 - 11569686
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-ccc 277  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||| | ||||||||||||||||||||||| ||| |||    
T  11569848 aataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacacttccaatgtgtgtgttctattttatgtgggacccc 11569749  T
Q  278 acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  11569748 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctt 11569686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 131 - 340
Target Start/End: Complemental strand, 20747501 - 20747291
Alignment:
Q  131 acaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaatacc 230  Q
    ||||||| ||||  ||||| ||||||||| ||||||  | ||||||| |||||| |||| |||| |||| |||  | |||  ||||||||||||||||||    
T  20747501 acaacaaccatatgctaaatttatgggaagtgatattcacgaataaa-aataataattactattgtttttatcgttatcaagtatttaaaattaaatacc 20747403  T
Q  231 gctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataactta 328  Q
    || |||| ||||||||||||||||  ||||||||||||||||||  |||||||| |||||||||||||||||||| | || |||||| | |||| ||||     
T  20747402 gcaatttaaacactactaatgtgtaagttctattttatgtaggacccccacactctattttttcaattcacacaacattaaatcaaagtataattacttg 20747303  T
Q  329 gtgtttaatctt 340  Q
     |||||||||||    
T  20747302 atgtttaatctt 20747291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 16835319 - 16835151
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||    
T  16835319 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 16835220  T
Q  277 cacacttta-ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| || |||||| ||||||||||| | ||||||||| | || | |||| ||||||||||||||||    
T  16835219 cacactctattttttttaattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaa 16835151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 186 - 340
Target Start/End: Complemental strand, 17963708 - 17963552
Alignment:
Q  186 attattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactt 283  Q
    |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||||||||     
T  17963708 attactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactc 17963609  T
Q  284 tattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||||||  | ||||||||| | || | |||| ||||||||||||    
T  17963608 tattttttcaattcacacatcattagatcaaagtatagttacttggtgtttaatctt 17963552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 87 - 340
Target Start/End: Original strand, 17600220 - 17600479
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctca--atcatatt----acaacaaacataacctaaaattatgggaaatgatatctatga-ataaaga 179  Q
    |||||||||||||||||||||||||||| ||||| |  || | |||    ||||| | ||||| ||||| ||||||||| ||||||  |||  | ||| |    
T  17600220 aatgaaggaaagatagaaaattcagttgaattcttatcataagattcacaacaaccaccataagctaaatttatgggaagtgatattcatgctaaaaaaa 17600319  T
Q  180 ataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc-- 277  Q
    |||| || || | ||||||| |||| | ||| ||||||||||||||||||| | |||| |||||||   |||| ||||||||||||||||| ||||||      
T  17600320 ataactactactgttatttttatcattatcaattatttaaaattaaataccacaatttaaacacta---atgtttgtgttctattttatgtgggaccctc 17600416  T
Q  278 acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| |||||||||||||||||||| | ||||||||| | | || |||| ||||||||||||    
T  17600417 acactctattttttcaattcacacaacattagatcaaagtatgattacttggtgtttaatctt 17600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 87 - 340
Target Start/End: Complemental strand, 12405608 - 12405354
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||| |||||||||  ||||||| ||| ||||| | || ||| ||||  | ||||| ||||| ||||||||| ||||||  | ||||||| |||||| |    
T  12405608 aatgatggaaagataagaaattcaattgaattcttattcttatcacaatcaccataagctaaatttatgggaagtgatattcacgaataaa-aataataa 12405510  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacacttt 284  Q
    ||| ||||||||| |||| | |||  ||||||||||||| |||| | |||| | |||||||||||||||||||||||||||| |  ||   ||||||| |    
T  12405509 ttactattatttttatcattatcaagtatttaaaattaagtacctcaatttaatcactactaatgtgtgtgttctattttatttgtgatctccacactct 12405410  T
Q  285 attttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||| |||| |||||| | ||||||||||| |||| | ||  |||||||||||    
T  12405409 atttttttaattaacacaacattagatcaaaatataattagttgatgtttaatctt 12405354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 87 - 276
Target Start/End: Original strand, 17914440 - 17914628
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||||||||||||  ||||| | ||| ||||| | || ||| ||||| | ||||||||||| ||||||||| ||||||  |  |||||| |||||| |    
T  17914440 aatgaaggaaagatatgaaattgaattgaattcttattcttatcacaaccaccataacctaaatttatgggaagtgatattcacaaataaa-aataataa 17914538  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc 276  Q
    ||  ||||||||| ||||   |||| |||||||||||||||||||  |||  ||||||| |||||||||||||| |||||||||||||||    
T  17914539 ttgctattatttttatcatcatcaggtatttaaaattaaataccgtaattaaaacactattaatgtgtgtgttccattttatgtaggacc 17914628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 27 - 191
Target Start/End: Complemental strand, 12799276 - 12799111
Alignment:
Q  27 taacaaactaatcggataagttcaaaataaa-caaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggattctcaatc 125  Q
    ||||||| |||||||||||||| |||| ||| |||| |||||| ||||| ||       |||||||| ||||||||| |||||  |||||||||| ||||    
T  12799276 taacaaaataatcggataagtttaaaagaaaacaaacccacaaaattagatgaaacaaactaatgaatgaaagataggaaattatgttggattctaaatc 12799177  T
Q  126 atattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattatt 191  Q
     ||||||||| || |||| ||||||||||||||| ||||||| |||| |||| |||||| ||||||    
T  12799176 ttattacaaccaagataagctaaaattatgggaagtgatatccatgagtaaaaaataataattatt 12799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 19994541 - 19994379
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| ||||   |||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| || |||  ||    
T  19994541 aataataattactattatttttatcataatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttacgtgggacccc 19994442  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||| |||||||| || | | ||| ||| | |||| || ||||||||||||||    
T  19994441 cacactctatttttt-aattcacataacattcgattaaagtataattacctagtgtttaatctt 19994379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 87 - 296
Target Start/End: Complemental strand, 11613151 - 11612941
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||| ||||||||  ||||||| ||| ||||| | || ||| ||||||  ||||| ||||| |||||| |||||||||  | ||||||| | ||||||    
T  11613151 aatgaatgaaagataagaaattcaattgaattcttattcttatcacaacac-cataagctaaatttatggaaaatgatattcacgaataaa-attaatta 11613054  T
Q  187 tt-attattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacactt 283  Q
     | | ||||||||| |||| | |||  |||||||||||||||||||  |||| ||||||||||||||||||||| |||||||||| ||||  | |||||     
T  11613053 atcactattatttttatcattatcaagtatttaaaattaaataccgaaatttaaacactactaatgtgtgtgttttattttatgtgggacctcaacactc 11612954  T
Q  284 tattttttcaatt 296  Q
    |||||||||||||    
T  11612953 tattttttcaatt 11612941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 186 - 277
Target Start/End: Original strand, 5856931 - 5857022
Alignment:
Q  186 attattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc 277  Q
    |||| ||||||||| |||| | ||| ||||||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||| ||||||    
T  5856931 attactattatttttatcattatcaattatttaaaattaaataccgcaatttaaacactactaatgtgtatgttctagtttatgtgggaccc 5857022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 25313629 - 25313509
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc-- 276  Q
    |||||||| ||||||| |||| |||| | |||  |||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||  ||||      
T  25313629 aataattactattattttttt-atcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatatgtgttctattttatgtgtgacccg 25313531  T
Q  277 cacactttattttttcaattca 298  Q
    |||||| |||||||||||||||    
T  25313530 cacactctattttttcaattca 25313509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 26201123 - 26201003
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc-- 276  Q
    |||||||| ||||||| |||| |||| | |||  |||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||  ||||      
T  26201123 aataattactattattttttt-atcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatatgtgttctattttatgtgtgacccg 26201025  T
Q  277 cacactttattttttcaattca 298  Q
    |||||| |||||||||||||||    
T  26201024 cacactctattttttcaattca 26201003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 127 - 340
Target Start/End: Complemental strand, 2699323 - 2699108
Alignment:
Q  127 tattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaa 226  Q
    ||||||||| |  |||| ||||| ||||||||| ||||||    ||||||| |||||| |||| ||||||||| || | | ||   ||||||||||||||    
T  2699323 tattacaactattataagctaaatttatgggaagtgatattctcgaataaa-aataataattactattatttttattattatctagtatttaaaattaaa 2699225  T
Q  227 taccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttat-tttttcaattcacacaatactagatcaaaatttaata 323  Q
    |||||| |||| |||||||||||||||||  ||||||||||||| |||  |||||||| ||| |||| | |||||||||| | ||||| ||| | ||||     
T  2699224 taccgcaatttaaacactactaatgtgtgaattctattttatgtgggacccccacactctatattttaccattcacacaacattagattaaagtataatt 2699125  T
Q  324 acttagtgtttaatctt 340  Q
    ||||  |||||||||||    
T  2699124 acttgatgtttaatctt 2699108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 215 - 340
Target Start/End: Complemental strand, 22694504 - 22694379
Alignment:
Q  215 tttaaaattaaataccgctattttaacactacta-atgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaatactagatca 313  Q
    |||| |||||||||| || |||| |||||| ||| |||||||||||||||||||||| |||||  ||   |||||||||||||||||||| | |||||||    
T  22694504 tttataattaaatacggcaatttaaacact-ctagatgtgtgtgttctattttatgtgggacctccaaactattttttcaattcacacaacattagatca 22694406  T
Q  314 aaatttaataacttagtgtttaatctt 340  Q
    || | |||| |||| ||||||||||||    
T  22694405 aagtataattacttggtgtttaatctt 22694379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 340
Target Start/End: Complemental strand, 33686833 - 33686638
Alignment:
Q  145 ctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacact 244  Q
    ||||| |||||| || ||||||   |||||||| |||||| |||| ||||||||| |||| |  ||  ||||||||| |||||||| |  ||| ||||||    
T  33686833 ctaaatttatggaaagtgatattattgaataaa-aataataattactattatttttatcattaccaagtatttaaaactaaataccacagtttaaacact 33686735  T
Q  245 actaatgtgtgtgttctattttatgtaggaccc-acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||  ||| |||||||||| | |||| ||||| |||||||||||||||||||| | ||||||||| | |||| | ||  |||||||||||    
T  33686734 actaatttgtaagttttattttatgtggaaccccacactctattttttcaattcacacaaaattagatcaaagtataattatttgatgtttaatctt 33686638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 340
Target Start/End: Original strand, 11428933 - 11429059
Alignment:
Q  215 tttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatc 312  Q
    |||||||||||| |||||  ||| || ||||| |||||||||| ||||||| |||| ||||||  ||||| |||||||||||||||| ||| | ||||||    
T  11428933 tttaaaattaaa-accgcagtttaaatactacaaatgtgtgtgctctatttaatgtgggacccccacactctattttttcaattcacgcaacattagatc 11429031  T
Q  313 aaaatttaataacttagtgtttaatctt 340  Q
    ||| | |||| |  | ||||||||||||    
T  11429032 aaagtataattatctggtgtttaatctt 11429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 211; Significance: 1e-115; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 19 - 382
Target Start/End: Complemental strand, 26286475 - 26286108
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    ||||||||||| |||||||||||||||||||||||  ||||||||||| |||||||| ||       |||||||||||||||||||||||||| ||||||    
T  26286475 agctcaagtaagaaactaatcggataagttcaaaaagaaacaaatccataagattagatgaaacaaactaatgaaggaaagatagaaaattcacttggat 26286376  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| |||||| |||||||||||||||||||||| || |||| |||||||||||||||| || |||||||||||||||| | ||||||||||    
T  26286375 tctcaatcttatcacaacacacataacctaaaattatgggaagtg-tatccatgaataaagaataataataattattattttcatcattatcagttattt 26286277  T
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacac----tttattttttcaattcacacaatactagatca 313  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||| |||    ||| ||||||||||| | |||| |||||||||    
T  26286276 aaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactattttttttttcaatttatacaacactagatca 26286177  T
Q  314 aaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    || |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26286176 aagtttaattacttggtgtttaatcttccaaccttccaatttctttccatcttcacaccaatgttccaa 26286108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 85 - 384
Target Start/End: Complemental strand, 13313566 - 13313264
Alignment:
Q  85 ctaatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataat 184  Q
    |||||||||||||||||  |||||| ||||||||||| ||| ||| ||||| ||||||| ||||||||||| ||| ||||||| ||||||||| || ||     
T  13313566 ctaatgaaggaaagatatgaaattctgttggattctcgatcttatcacaaccaacataaactaaaattatgtgaagtgatatccatgaataaaaaaaaaa 13313467  T
Q  185 ta-ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacac 281  Q
    || || ||||||||||||||| | |||  |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||  ||||||    
T  13313466 taattgttattattttcatcattatcaagtatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacatccacac 13313367  T
Q  282 tttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttcca 381  Q
    | ||||||||||||||||||||||||| |||||| |||| ||||||| |||||||||||  ||||||||| |||||||||||||||||| ||||||||||    
T  13313366 tctattttttcaattcacacaatactaaatcaaagtttagtaacttaatgtttaatcttcaaaccttccagtttctttccatcttcacatcaatgttcca 13313267  T
Q  382 ata 384  Q
    |||    
T  13313266 ata 13313264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 30258859 - 30259065
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    |||| |||||||||||||||| |||||| ||||||  ||||||| |||||||||||||||       |||| ||||||||||||||||||||||||  ||    
T  30258859 agctaaagtaacaaactaatcagataagctcaaaaagaaacaaacccacaagattagctgaaacaaactaacgaaggaaagatagaaaattcagttcaat 30258958  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| ||||||||||||| ||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| | |||| |||||    
T  30258959 tctcaatcttatcacaacaaacataatctaaaattatgggaagtgatatccatgaataaacaataattattattattattttcatcattatcaggtattt 30259058  T
Q  218 aaaatta 224  Q
    |||||||    
T  30259059 aaaatta 30259065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 85 - 329
Target Start/End: Original strand, 4580304 - 4580556
Alignment:
Q  85 ctaatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataat 184  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| |||||||  |||| ||| ||||||||||| ||||||| ||||||||| ||||||    
T  4580304 ctaatgaaggaaagataggaaattcagttggattctcaatcttatcacaacaagtataagctacaattatgggaagtgatatcaatgaataaataataat 4580403  T
Q  185 tattattattat------tttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc- 277  Q
     || || || ||      |||||||| | |||| |||||| ||||||||||| |||| | |||||||||||||||||||||||||||||| | ||||||     
T  4580404 aataataataataataattttcatcattatcaggtatttagaattaaataccactatataaacactactaatgtgtgtgttctattttatatgggacccc 4580503  T
Q  278 -acactttattttttcaattcacacaatactagatcaaaatttaataacttag 329  Q
     ||||| |||||||| ||||||||||| |||| |||||| |||||| ||||||    
T  4580504 tacactctatttttttaattcacacaacactaaatcaaagtttaattacttag 4580556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 87 - 344
Target Start/End: Original strand, 3046422 - 3046679
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||||||||||||  | ||||| ||| ||||| | || ||| ||||| | |||||  |||| |||| |||| ||||||  | ||||||| ||| ||      
T  3046422 aatgaaggaaagataagacattcaattgaattcttattcttatcacaaccaccataagttaaatttataggaagtgatattcacgaataaa-aattatag 3046520  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-cccacacttta 285  Q
    | ||||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||| ||||||||| |    
T  3046521 taattattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccacacttaa 3046620  T
Q  286 ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    ||||||||||||||||||   || |||||| | |||| |||| ||||||||||||||||    
T  3046621 ttttttcaattcacacaactttatatcaaattataattacttggtgtttaatctttcaa 3046679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 216 - 382
Target Start/End: Original strand, 30259238 - 30259406
Alignment:
Q  216 ttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga---cccacactttattttttcaattcacacaatactagatc 312  Q
    ||||||||||||| | |||||| |||||||||||||| |||| |||||||||||| |||   |||||||| ||||||||||||| ||| || ||||||||    
T  30259238 ttaaaattaaatatcactatttaaacactactaatgtatgtgatctattttatgt-ggatctcccacactctattttttcaatttacaaaacactagatc 30259336  T
Q  313 aaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||| |||||| |||| || ||||||||| ||||||| |||||| ||||||||| ||||||||||||||||    
T  30259337 aaagtttaattacttggtatttaatcttccaacctttcaatttatttccatctccacaccaatgttccaa 30259406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 4931162 - 4931329
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||  |||  ||    
T  4931162 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccc 4931261  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | || |||||| | |||| |||| ||||||||||||||||    
T  4931262 cacactctattttttcaattcacacaacattatatcaaagtataattacttggtgtttaatctttcaa 4931329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 340
Target Start/End: Original strand, 12256870 - 12257123
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||||||| |||  ||||||| ||| ||||  | || ||| ||||| | ||||| ||||| ||||||||| ||||||  | ||||||| |||||| |    
T  12256870 aatgaaggaaaaataagaaattcaattgaattcctattcttatcacaaccaccataagctaaatttatgggaagtgatattcacgaataaa-aataataa 12256968  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-cccacacttta 285  Q
    ||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||||||||| |||||||||||||||||| ||| |||||||| ||    
T  12256969 ttactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgcgtgtgttctattttatgtgggaccccacactcta 12257068  T
Q  286 ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||||||| |||||| | || |||||| | |||| | || ||| ||||||||    
T  12257069 ttttttcaatttacacaacattaaatcaaagtataattatttggtgattaatctt 12257123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 148 - 340
Target Start/End: Original strand, 21672114 - 21672306
Alignment:
Q  148 aaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactact 247  Q
    |||||||||||| ||||||  | ||||||| |||||| |||| ||||||||| |||| | |||  ||| |||||||||||||||| |||| |||| ||||    
T  21672114 aaattatgggaagtgatattcacgaataaa-aataataattactattatttttatcattatcaagtatataaaattaaataccgcaatttaaacagtact 21672212  T
Q  248 aatgtgtgtgttctattttatgtagga-cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||| |||||||||||| ||| |||||| | ||||||||||||||||||||   ||||||||| | |||| |||| ||||||| ||||    
T  21672213 aatgtgtgtgctctattttatgtgggatcccacattctattttttcaattcacacaacgttagatcaaagtataattacttggtgtttattctt 21672306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 87 - 342
Target Start/End: Complemental strand, 10392338 - 10392079
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||||||||||||  ||||||| ||| ||||| | || ||| ||||  | ||||||||||| ||||||||| ||||||  ||||||||| |||||| |    
T  10392338 aatgaaggaaagataagaaattcaattgaattcttattcttatcacaatcaccataacctaaatttatgggaagtgatattcatgaataaa-aataataa 10392240  T
Q  187 ttat-tattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactt 283  Q
    |||  | || |||| || | | |||  |||||||||||||||||||| |||| ||||||  |||  ||||||||||||||||||| || |||  |||||     
T  10392239 ttacattttttttttattattatcaagtatttaaaattaaataccgcaatttaaacactgataacatgtgtgttctattttatgtggggccctcacactc 10392140  T
Q  284 tatttttt--caattcacacaatactagatcaaaatttaataacttagtgtttaatctttc 342  Q
    ||||||||  |||||||||||| ||||||||||| | |||| |||| ||||||||||||||    
T  10392139 tattttttttcaattcacacaacactagatcaaagtataattacttggtgtttaatctttc 10392079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 179 - 305
Target Start/End: Original strand, 26342146 - 26342272
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccca 278  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||| | | |||| |||||||||||||||||||||||||||||||| ||||||     
T  26342146 aataataattactattatttttatcattatcaagtatttaaaattaaatatcacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 26342245  T
Q  279 cactttattttttcaattcacacaata 305  Q
    |||  ||||||||||||||||| ||||    
T  26342246 cacactattttttcaattcacataata 26342272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 131 - 340
Target Start/End: Original strand, 3880860 - 3881073
Alignment:
Q  131 acaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaatacc 230  Q
    ||||||| ||||| ||||| ||||||||| ||||||  |  |||||| |||||| |||| ||||||||| |||| | |||  |||||||||||||||| |    
T  3880860 acaacaatcataagctaaatttatgggaagtgatattcacaaataaa-aataataattactattatttttatcattatcaagtatttaaaattaaatatc 3880958  T
Q  231 gctattttaacactactaatg---tgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatcaaaatttaataac 325  Q
     | |||| | |||||||||||   |||||||||||||||||||  |||||  ||||| |||||||||||||||| ||||| ||||||||| | |||| ||    
T  3880959 acaatttaagcactactaatgatgtgtgtgttctattttatgtgagacccccacactctattttttcaattcacgcaatattagatcaaagtataattac 3881058  T
Q  326 ttagtgtttaatctt 340  Q
    || || |||||||||    
T  3881059 ttggtatttaatctt 3881073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 42625740 - 42625572
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaatac-----cgctattttaacactactaatgtgtgtgttctattttatgtagg 273  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||     ||| |||| ||||||||||||||||| |||||||||||||| ||    
T  42625740 aataataattactattatttttatcattatcaagtatttaaaattaaatactgcaccgcaatttaaacactactaatgtgtgagttctattttatgtggg 42625641  T
Q  274 accc--acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||  ||||| ||||||||||||||||| || | ||||||||| | |||| |||| ||||||||||||    
T  42625640 acccccacactctattttttcaattcacataacattagatcaaagtataattacttggtgtttaatctt 42625572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 12181905 - 12181811
Alignment:
Q  183 attattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc 277  Q
    ||||||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||    
T  12181905 attattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccc 12181811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 213 - 339
Target Start/End: Complemental strand, 23247681 - 23247554
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc-cacactttattttttcaattcacacaatactagat 311  Q
    |||||||||||||||||||  |||| |||||||||||||| ||| |||||||||| || |||||  ||||| ||||||||||||||||| || | |||||    
T  23247681 tatttaaaattaaataccgtaatttaaacactactaatgtttgttttctattttaggtgggaccatacactctattttttcaattcacataacattagat 23247582  T
Q  312 caaaatttaataacttagtgtttaatct 339  Q
    |||| | |||| |||| |||||||||||    
T  23247581 caaagtataattacttggtgtttaatct 23247554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 87 - 334
Target Start/End: Original strand, 15973571 - 15973819
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||| |||||||| || |||| ||| ||| ||| || ||| ||||| ||||||| ||||||||||||||| | ||||  |  ||||||||| ||||     
T  15973571 aatgaagaaaagataggaagttcaattgtattttcagtcttatcacaaccaacataaactaaaattatgggaagttatatgcacaaataaagaa-aatt- 15973668  T
Q  187 ttattattattttcatcaatgtcagttatttaaaatt--aaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc--cacact 282  Q
     || ||||||||| |||| | || | ||||||||| |  |||||||   || | || |||||||||||||||||||||||||||||  ||||  ||||||    
T  15973669 -tactattatttttatcattatccggtatttaaaaattaaaataccataatataaatactactaatgtgtgtgttctattttatgtgcgacctccacact 15973767  T
Q  283 ttattttttcaattcacacaatactagatcaaaatttaataacttagtgttt 334  Q
    |||||||||| |||||||||| ||||| ||||| ||| || |||| ||||||    
T  15973768 ttattttttcgattcacacaacactagctcaaagtttcatgacttggtgttt 15973819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 234 - 340
Target Start/End: Complemental strand, 44508398 - 44508290
Alignment:
Q  234 attttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtg 331  Q
    |||| |||||||||||| ||||||||||||||||| | |||  |||||||| |||||||||||||||||||||| ||||||||| | |||| ||||  |     
T  44508398 atttaaacactactaatatgtgtgttctattttatatgggattcccacactctattttttcaattcacacaatattagatcaaagtataattacttgata 44508299  T
Q  332 tttaatctt 340  Q
    |||||||||    
T  44508298 tttaatctt 44508290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 270
Target Start/End: Complemental strand, 9815080 - 9814941
Alignment:
Q  131 acaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaa-ttaaatac 229  Q
    ||||| ||| ||| ||||| ||||| ||| ||||||  ||||||||| |||||| |||| |||||||||||| | | |||  ||||||||| ||||||||    
T  9815080 acaaccaacgtaagctaaatttatgagaagtgatattgatgaataaa-aataataattactattattttcattattatcaagtatttaaaaattaaatac 9814982  T
Q  230 cgctattttaacactactaatgtgtgtgttctattttatgt 270  Q
    ||| |||| || ||||||||||| |||||||||||||||||    
T  9814981 cgcaatttaaaaactactaatgtatgtgttctattttatgt 9814941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 131 - 270
Target Start/End: Complemental strand, 10717005 - 10716866
Alignment:
Q  131 acaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaa-ttaaatac 229  Q
    ||||| ||| ||| ||||| ||||| ||| ||||||  ||||||||| |||||| |||| |||||||||||| | | |||  ||||||||| ||||||||    
T  10717005 acaaccaacgtaagctaaatttatgagaagtgatattgatgaataaa-aataataattactattattttcattattatcaagtatttaaaaattaaatac 10716907  T
Q  230 cgctattttaacactactaatgtgtgtgttctattttatgt 270  Q
    ||| |||| || ||||||||||| |||||||||||||||||    
T  10716906 cgcaatttaaaaactactaatgtatgtgttctattttatgt 10716866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 244 - 340
Target Start/End: Original strand, 2595774 - 2595872
Alignment:
Q  244 tactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||| | ||||| ||| | |||| | || ||||||||||||    
T  2595774 tactaatgtgtgtgttctattttatgtgggatacccacactctattttttcaattcacacaacattagattaaagtgtaattatttggtgtttaatctt 2595872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 220 - 337
Target Start/End: Complemental strand, 23151804 - 23151683
Alignment:
Q  220 aattaaataccgctattttaacactactaat--gtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatactagatcaaa 315  Q
    ||||||||| | | |||| ||||||||||||  |||||||||||||||||||  ||||  |||||||||||||||||||||||||||| | |||||||||    
T  23151804 aattaaatatctcaatttaaacactactaatatgtgtgtgttctattttatgcgggactcccacactttattttttcaattcacacaacattagatcaaa 23151705  T
Q  316 atttaataacttagtgtttaat 337  Q
     | |||| ||||  ||||||||    
T  23151704 gtataattacttgatgtttaat 23151683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 87 - 250
Target Start/End: Complemental strand, 6590261 - 6590099
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||| ||||||||||||||||||||  ||| | | || ||| |||||||| |||| ||||| ||||||||||||||||| | ||||||| |||||| |    
T  6590261 aatgaaagaaagatagaaaattcagttaaatttttattcttatcacaacaaatataaactaaatttatgggaaatgatatccacgaataaa-aataataa 6590163  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaat 250  Q
    | | ||||||||| | |  | |||  ||||||||||||||||   | |||| ||||||||||||    
T  6590162 tgactattatttttagctttatcaagtatttaaaattaaataatacaatttaaacactactaat 6590099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 252 - 340
Target Start/End: Original strand, 12802295 - 12802384
Alignment:
Q  252 tgtgtgttctattttatgtaggaccc-acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||| |||||||||||||| |||||| ||||| |||||||||||||||||||| | ||||| ||| | |||| |||| ||||||||||||    
T  12802295 tgtgagttctattttatgtgggaccccacactctattttttcaattcacacaacattagattaaagtataattacttggtgtttaatctt 12802384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 255
Target Start/End: Original strand, 12800278 - 12800405
Alignment:
Q  127 tattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaa 226  Q
    ||||||||| |  |||||||||| |||||| || | |||| |  ||||||| |||||| |||| ||||||||| |||| | |||  ||||||||||||||    
T  12800278 tattacaaccactataacctaaatttatggaaagttatattttcgaataaa-aataataattactattatttttatcattatcaagtatttaaaattaaa 12800376  T
Q  227 taccgctattttaacactactaatgtgtg 255  Q
    ||| || |||| |||||||||||||||||    
T  12800377 tactgcaatttaaacactactaatgtgtg 12800405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 10674447 - 10674593
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatc---tatgaataaagaataa 183  Q
    ||||||||||||| || |||||||  | ||||||||||| |||  |||| ||||||| || |||||||||||| |||||||   ||  || ||| |||||    
T  10674447 aatgaaggaaagagaggaaattcaactagattctcaatcttatcgcaaccaacataaactcaaattatgggaagtgatatcccttagtaaaaaataataa 10674546  T
Q  184 ttattattattattttcatcaatgtcagttatttaaaattaaatacc 230  Q
    ||| |||| || |||| || | | ||| |||||||||||||||||||    
T  10674547 ttaatatttttttttttattattatcaattatttaaaattaaatacc 10674593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 256
Target Start/End: Original strand, 16373245 - 16373364
Alignment:
Q  136 aaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctat 235  Q
    |||||||| ||||| |||||| || ||||||  | ||||||| |||||| || | ||||||||| |||  | |||| ||||||||||||| ||| || ||    
T  16373245 aaacataagctaaatttatggaaagtgatatacacgaataaa-aataataatgactattatttttatcgttatcaggtatttaaaattaactactgcaat 16373343  T
Q  236 tttaacactactaatgtgtgt 256  Q
    || ||||||||||||||||||    
T  16373344 ttaaacactactaatgtgtgt 16373364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 192
Target Start/End: Original strand, 15643144 - 15643246
Alignment:
Q  90 gaaggaaagatagaaaattcagttggattctc-aatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattatt 188  Q
    |||||||||||| |||||| |||||||||||| || | ||| ||||| | |||||  |||||||||||||  ||||||| ||||||||| |||||| |||    
T  15643144 gaaggaaagataaaaaatttagttggattctcgaaccttatcacaactagcataagttaaaattatgggatgtgatatc-atgaataaaaaataataatt 15643242  T
Q  189 atta 192  Q
    ||||    
T  15643243 atta 15643246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 4582304 - 4582364
Alignment:
Q  325 cttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaataca 386  Q
    |||| ||||||||||  |||||||||||||| |||||||||||| | |||||||||||||||    
T  4582304 cttaatgtttaatctaccaaccttccaattt-tttccatcttcagatcaatgttccaataca 4582364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 4580244 - 4580287
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttc-aaaataaacaaa 61  Q
    ||||||||||||||||||||||||||||||| |||| |||||||    
T  4580244 agctcaagtaacaaactaatcggataagttcaaaaagaaacaaa 4580287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 268
Target Start/End: Complemental strand, 10387599 - 10387417
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||| |||||||  ||||||| ||| ||||| | || ||| ||||||| ||||| ||||| ||||||||| ||||||  | ||| ||| |||||| |    
T  10387599 aatgaagaaaagataagaaattcaattgaattcttattcttatcacaacaaccataagctaaatttatgggaagtgatattcacgaaaaaaaaataataa 10387500  T
Q  187 ttattattatt-ttcatcaatgtcagttatttaaaattaaataccgctattttaacac-tactaatgtgtgtgttctattttat 268  Q
      | |||| || || |||| | |||  |||||||||||||||||| | |||| ||||| | ||||| |||||||||||||||||    
T  10387499 a-actatttttctttatcattatcaaatatttaaaattaaataccacaatttaaacacctgctaatatgtgtgttctattttat 10387417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 270
Target Start/End: Complemental strand, 27246749 - 27246614
Alignment:
Q  132 caacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccg 231  Q
    |||| ||||||| ||||| ||||| ||| ||||||| | ||||||| |||||| || ||||||| ||| |||| | |||  ||||||  | |||||| ||    
T  27246749 caaccaacataagctaaatttatgagaagtgatatccacgaataaa-aataataatgattattagttttatcattatcaagtatttatgaataaatagcg 27246651  T
Q  232 ctattttaacactactaatgtgtgtgttctattttatgt 270  Q
    | |||| ||||||| ||||||||||  ||||||||||||    
T  27246650 caatttaaacactattaatgtgtgt--tctattttatgt 27246614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 11 - 382
Target Start/End: Original strand, 16036376 - 16036750
Alignment:
Q  11 cacagataagctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattc 109  Q
    ||||||| |||||||| ||||||||||||||||||||||||||  ||||||| ||||||||||| |||       |||||||||||||||||  ||||||    
T  16036376 cacagatcagctcaagaaacaaactaatcggataagttcaaaaagaaacaaacccacaagattaactgaaagaaactaatgaaggaaagataagaaattc 16036475  T
Q  110 agttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtc 209  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| || ||||||  |||||||||||||||| || |||||||||||||||| | ||    
T  16036476 agttggattctcaatcttatcacaacaaacataacctaaaattatggaaagtgatattcatgaataaagaataataataattattattttcatcattatc 16036575  T
Q  210 agttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatact 307  Q
    || |||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||||||||||| |||    
T  16036576 aggtatttaaatttaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacctccacactctattttttcaattcacacaacact 16036675  T
Q  308 agatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    |||||||| |||| | |||| |||||||||||| |||||||  ||||||||||||||||||||||||||||||||    
T  16036676 agatcaaagtttagttacttggtgtttaatcttccaaccttgtaatttctttccatcttcacaccaatgttccaa 16036750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 382
Target Start/End: Complemental strand, 23192165 - 23191791
Alignment:
Q  11 cacagataagctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattc 109  Q
    ||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||       |||||||||||||||||| |||||     
T  23192165 cacagatcagctcaagtaacaaactaatcggataagttcaaaaagaaacaaatccacaagattagatgaaacaaactaatgaaggaaagataggaaatta 23192066  T
Q  110 agttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattat---tattattttcatcaat 206  Q
    || ||||||||||||| ||| |||||||||||||||| |||||| ||||| ||||||| |||||||||||||||| || ||   ||||||||| |||| |    
T  23192065 agctggattctcaatcttatcacaacaaacataacctcaaatta-gggaagtgatatccatgaataaagaataataataataattattatttttatcatt 23191967  T
Q  207 gtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaatac 306  Q
     |||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||    |||||||| |||||||||||||||||||| ||    
T  23191966 atcaggtatttaaaattaaataccactacttaaacactactaatgtgtgtgttctattttatgtgacccccacactctattttttcaattcacacaacac 23191867  T
Q  307 tagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||||||| ||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  23191866 tagatcaaagtttaataacttggtgtttaatcttccaacgttccaatttctttccatcttcacaccaatgttccaa 23191791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 11 - 370
Target Start/End: Original strand, 40166720 - 40167072
Alignment:
Q  11 cacagataagctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattc 109  Q
    ||||||| ||||||||||||||| ||||||||| |||||||||  |||||||||||||||||||| ||       ||||||||| |||||||| | ||||    
T  40166720 cacagatcagctcaagtaacaaattaatcggatcagttcaaaaagaaacaaatccacaagattagatgaaacagactaatgaagcaaagataggatattc 40166819  T
Q  110 agttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtc 209  Q
    |||||||||||||| | ||| ||||||||||||||||||||||| ||||| ||||||| ||||||||| |||         ||||||||| |||| | ||    
T  40166820 agttggattctcaagcttatcacaacaaacataacctaaaatta-gggaagtgatatccatgaataaataat---------tattatttttatcattatc 40166909  T
Q  210 agttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatact 307  Q
    || |||||||||||||||||| || ||| ||||||||| |||||||| ||||||||||| | ||||||  ||| | ||||||||||||||||||||||||    
T  40166910 aggtatttaaaattaaataccactgtttaaacactactgatgtgtgtcttctattttatttgggacccctacattctattttttcaattcacacaatact 40167009  T
Q  308 agatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcaca 370  Q
    |||||||| ||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  40167010 agatcaaagtttaataacttggtgtttaatcttccaaccttccaatttcttttcatcttcaca 40167072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 382
Target Start/End: Original strand, 12260754 - 12261119
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    ||||||||||||||| ||||||||||| |||||||  ||||||| |||||| ||||   |       |||||||| |||| ||||||| |||||||||||    
T  12260754 agctcaagtaacaaattaatcggataaattcaaaaagaaacaaacccacaaaattataagaaacaaactaatgaaagaaacatagaaatttcagttggat 12260853  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| ||||| ||||||| ||||||||||| ||| ||||||| ||||||||| |||||| |||| ||||||||| |||| | |||  |||||    
T  12260854 tctcaatcttatcacaaccaacataagctaaaattatgagaagtgatatccatgaataaaaaataataattactattatttttatcattatcaagtattt 12260953  T
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-cccacactttattttttcaattcacacaatactagatcaaa- 315  Q
    ||||||||||||| |||||| ||||||||||||| |||||||||||||||||| ||| |||||||| ||||||||  ||| ||||||||||||||||||     
T  12260954 aaaattaaataccactatttaaacactactaatgagtgtgttctattttatgtgggaccccacactctatttttt-tattaacacaatactagatcaaag 12261052  T
Q  316 atttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
     |||||| |  | || |||||| |  |||||||||||||| ||| || |||||||||| ||||||||    
T  12261053 ttttaattaactggtatttaatttcccaaccttccaatttattttcaacttcacaccattgttccaa 12261119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 115 - 382
Target Start/End: Complemental strand, 39586299 - 39586034
Alignment:
Q  115 gattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagtta 214  Q
    ||||||||||| ||| |||||||||||||| ||||||| |||||| ||||||  |||||||||||||||| |||||||||||||| |||| | |||| ||    
T  39586299 gattctcaatcttatcacaacaaacataacttaaaattgtgggaagtgatattcatgaataaagaataataattattattatttttatcattatcaggta 39586200  T
Q  215 tttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatactagatc 312  Q
    |||||||||||||| | |||||| |||| || |||  ||| ||||||||||||||| ||||  ||||||| ||||||||||||| ||||||||||| |||    
T  39586199 tttaaaattaaatatcactatttaaaca-tattaa--tgtttgttctattttatgtgggacctccacactctattttttcaatt-acacaatactatatc 39586104  T
Q  313 aaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||| |||||||||||  | |||||||||||||| || ||||||| |||||||||||||||||||||||||    
T  39586103 aaagtttaataacttgatctttaatctttcaacatttcaatttccttccatcttcacaccaatgttccaa 39586034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 10136264 - 10136427
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||    
T  10136264 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 10136363  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  10136364 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctt 10136427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 25844695 - 25844862
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||  |||  ||    
T  25844695 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccc 25844794  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  25844795 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 25844862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 139 - 333
Target Start/End: Complemental strand, 51040716 - 51040522
Alignment:
Q  139 cataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctatttt 238  Q
    ||||| ||||| |||||| |||||||||    |||||||  ||||| |||| ||||||||| |||| | |||  |||||||||||||||| | | ||||     
T  51040716 cataagctaaatttatggaaaatgatattctcgaataaa--ataataattactattatttttatcattatcaagtatttaaaattaaataacacaattta 51040619  T
Q  239 aacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtt 333  Q
    ||||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||||||||||| | ||||||||| | |||| |||| |||||    
T  51040618 aacactactaatgtgtgtgttctatttcatgtgggactcccacactttattttttcaattcacacaacattagatcaaagtataattacttggtgtt 51040522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 16648787 - 16648648
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc- 277  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||     
T  16648787 aataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 16648688  T
Q  278 --acactttattttttcaattcacacaatactagatcaaa 315  Q
      ||||| ||||||||||||| |||||| | |||||||||    
T  16648687 ctacactctattttttcaatttacacaacattagatcaaa 16648648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 19798152 - 19798012
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga---c 275  Q
    ||||||||||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||| || | |||||||||||||| |||   |    
T  19798152 aataattattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatgcgagttctattttatgtgggacccc 19798053  T
Q  276 ccacacttta-ttttttcaattcacacaatactagatcaaa 315  Q
    |||||||||| |||||||||||||||||| | |||||||||    
T  19798052 ccacactttatttttttcaattcacacaacattagatcaaa 19798012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 233 - 382
Target Start/End: Original strand, 46697308 - 46697458
Alignment:
Q  233 tattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgt 332  Q
    ||||| |||| ||||||||| |||||| |||||||||| ||||||| ||| |||||||||||||||||||| |||| |||||| | |||| || |  |||    
T  46697308 tatttaaacattactaatgtatgtgttatattttatgtgggacccatactctattttttcaattcacacaacactaaatcaaagtctaattacattctgt 46697407  T
Q  333 ttaatctttcaaccttccaatttctttcc-atcttcacaccaatgttccaa 382  Q
    |||||  | |||| ||||||||| ||||| | ||||||| |||||||||||    
T  46697408 ttaataatccaacattccaatttttttcctaacttcacatcaatgttccaa 46697458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 139 - 303
Target Start/End: Original strand, 11807119 - 11807284
Alignment:
Q  139 cataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctatttt 238  Q
    ||||| ||||| ||||||||||||||||    ||||||| |||||| |||| |||| |||| |||| | |||  |||||||| ||||||||| | ||||     
T  11807119 cataagctaaatttatgggaaatgatattccggaataaa-aataataattaatattgtttttatcattatcaagtatttaaatttaaataccacaattta 11807217  T
Q  239 aacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaa 303  Q
    |||||| ||||||||||||||||||||||||| | |   || |||| ||||||||||||||||||||    
T  11807218 aacactgctaatgtgtgtgttctattttatgtggaatctccgcactctattttttcaattcacacaa 11807284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 340
Target Start/End: Original strand, 38622135 - 38622291
Alignment:
Q  186 attattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactt 283  Q
    |||| ||||||||| |||| | |||  |||| ||||| |||||| ||  ||| |||||||||||| |||| |||||||||||||| |||  ||||||||     
T  38622135 attactattatttttatcattatcaagtattcaaaatcaaatactgcattttaaacactactaatatgtgagttctattttatgtgggactcccacactc 38622234  T
Q  284 tattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||||||| | ||||||||| | |||| ||||  | |||||||||    
T  38622235 tattttttcaattcacacaacattagatcaaagtataattacttgatttttaatctt 38622291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 324 - 384
Target Start/End: Original strand, 16038859 - 16038919
Alignment:
Q  324 acttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaata 384  Q
    |||||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||||    
T  16038859 acttagtgtttaatcttcaaacctttcaatttctttccatcttcacgccaatgttccaata 16038919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 39587689 - 39587589
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttc-aaaataaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||| |||||||||| ||       ||||||||| ||| ||||||||||||||| |||    
T  39587689 agctcaagtaacaaactaatcggataaattcaaaaagaaacaaatcaacaagattagatgaaactaactaatgaagaaaatatagaaaattcagttagat 39587590  T
Q  118 t 118  Q
    |    
T  39587589 t 39587589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 87 - 204
Target Start/End: Original strand, 46697180 - 46697299
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttgg---attctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataa 183  Q
    ||||||||||||||||  || ||||||||   |||||||||| ||| ||||||||||||| ||||||| ||||||| ||||||  |||| |||| |||||    
T  46697180 aatgaaggaaagatagggaactcagttggaatattctcaatcttatcacaacaaacataa-ctaaaataatgggaagtgatattcatgagtaaaaaataa 46697278  T
Q  184 ttattattattattttcatca 204  Q
    | |||| ||||||||| ||||    
T  46697279 taattactattatttttatca 46697299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 26926877 - 26926784
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaa-ttaaataccgctattttaa-cactactaatgtgtgtgttctattttatgt 270  Q
    |||||| |||| ||||||||| |||| | |||  ||||||||| ||||||||| | |||| || ||||||||||||||||||||||||||||||    
T  26926877 aataataattactattatttttatcattatcaagtatttaaaaattaaataccacaatttaaaacactactaatgtgtgtgttctattttatgt 26926784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 328
Target Start/End: Original strand, 8138602 - 8138682
Alignment:
Q  249 atgtgtgtgttctattttatgtaggaccc-acactttattttttcaattcacacaatactagatcaaaatttaataactta 328  Q
    ||||||||||||||||||||||  ||||| | ||| |||||||||||||||||||||| || |||||| | |||| |||||    
T  8138602 atgtgtgtgttctattttatgtgtgacccgatactctattttttcaattcacacaatattatatcaaagtataattactta 8138682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 39199863 - 39199805
Alignment:
Q  240 acactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaatt 296  Q
    |||||| |||||||||||||||||||||||| ||||  ||||||| |||||||||||||    
T  39199863 acactattaatgtgtgtgttctattttatgtgggacctccacactctattttttcaatt 39199805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 19 - 382
Target Start/End: Original strand, 28603864 - 28604229
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||       |||||||||||||||||| ||||||||||||||    
T  28603864 agctcaagtaacaaactaatcggataagttcaaaaagaaacaaacccacaagattagctgaaacaaactaatgaaggaaagataggaaattcagttggat 28603963  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| | ||| ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| | |||  |||||    
T  28603964 tctcaatcttatcataacgaacataacctaaaattatgggaagtgatatccatgaataaaaaataattattattattattttcatcattatcatgtattt 28604063  T
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc-cacactttattttttcaattcacacaatactagatcaaaa 316  Q
    ||||||||||| | |||||| ||||||  |||| |||||  |||||||||||| ||||| || ||| |||||||||||||||||||| ||||||||||||    
T  28604064 aaaattaaatatcactatttaaacactgataatctgtgtaatctattttatgtgggaccgcatactctattttttcaattcacacaacactagatcaaaa 28604163  T
Q  317 tttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    |||||| |||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  28604164 tttaattacttggtgtttaatcttccaaccttccaatttcttttcatcttcacaccaatgttccaa 28604229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 19 - 382
Target Start/End: Complemental strand, 42925988 - 42925628
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    ||||||||||| |||||||||| ||||||||||||  ||||||| |||||||||||||||       ||||||||||| ||| ||  |||||||||||||    
T  42925988 agctcaagtaagaaactaatcgaataagttcaaaaagaaacaaacccacaagattagctgaaacaaactaatgaaggacagacagggaattcagttggat 42925889  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| ||||||    ||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||||||| | |||| |||||    
T  42925888 tctcaatcttatcacaaca----taacctaaaattatgggaagtgatatccatgaataaataataataattattattattttcatcattatcaggtattt 42925793  T
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc--cacactttattttttcaattcacacaatactagatcaaa 315  Q
    ||||||||||| | |||||| ||||||||||||||||||  ||||||||| || |||||  |||||| |||||||||||||||||||| |||||||||||    
T  42925792 aaaattaaatatcactatttaaacactactaatgtgtgt--tctattttacgtgggacctccacactctattttttcaattcacacaacactagatcaaa 42925695  T
Q  316 atttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
     |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42925694 gtttaattacttggtgtttaatcttccaaccttccaatttctttccatcttcacaccaatgttccaa 42925628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 85 - 387
Target Start/End: Original strand, 31328907 - 31329211
Alignment:
Q  85 ctaatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataat 184  Q
    |||||||| ||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||| || ||| ||||||| ||||||||||||||||    
T  31328907 ctaatgaaagaaagataagaaattcagttggattctcaatcttatcacaacaaacataacctaaaattgtgagaagtgatatccatgaataaagaataat 31329006  T
Q  185 tattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacact 282  Q
     || || || |||||||||| | |||  |||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| || ||||  |||||||    
T  31329007 aataataataattttcatcattatcatgtatttaaaattaaataccactatttaaacactactaacgtgtttgttctattttacgtgggacctccacact 31329106  T
Q  283 ttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
     |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31329107 ctattttttcaattcacacaacactagatcaaagtttaataacttggtgtttaatcttccaaccttccaatttctttccatcttcacaccaatgttccaa 31329206  T
Q  383 tacat 387  Q
     ||||    
T  31329207 cacat 31329211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 85 - 387
Target Start/End: Original strand, 31335628 - 31335932
Alignment:
Q  85 ctaatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataat 184  Q
    |||||||| ||||||||  |||||||||||||||||||||| ||| |||||||||||||||||||||| || ||| ||||||| ||||||||||||||||    
T  31335628 ctaatgaaagaaagataagaaattcagttggattctcaatcttatcacaacaaacataacctaaaattgtgagaagtgatatccatgaataaagaataat 31335727  T
Q  185 tattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacact 282  Q
     || || || |||||||||| | |||  |||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| || ||||  |||||||    
T  31335728 aataataataattttcatcattatcatgtatttaaaattaaataccactatttaaacactactaacgtgtttgttctattttacgtgggacctccacact 31335827  T
Q  283 ttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
     |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31335828 ctattttttcaattcacacaacactagatcaaagtttaataacttggtgtttaatcttccaaccttccaatttctttccatcttcacaccaatgttccaa 31335927  T
Q  383 tacat 387  Q
     ||||    
T  31335928 cacat 31335932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 333
Target Start/End: Complemental strand, 44630775 - 44630448
Alignment:
Q  13 cagataagctcaagtaacaaactaatcggataagttcaaaataaa----caaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaatt 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||    |||| |||||||||||| ||       ||||||||||||||||||||||||    
T  44630775 cagataagctcaagtaacaaactaatcggataagttcaaaaaaaaacaacaaacccacaagattagatgaaacaaactaatgaaggaaagatagaaaatt 44630676  T
Q  109 cagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgt 208  Q
    |||||||||| |||||| ||| ||||||||||||||||||||||||| ||| ||||||| |||||||| ||||||| || || |||||| | |||| | |    
T  44630675 cagttggattttcaatcttatcacaacaaacataacctaaaattatgagaagtgatatccatgaataaggaataataataataattattattatcattat 44630576  T
Q  209 cagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacacttt---attttttcaattcacacaata 305  Q
    ||| |||||||||||||| ||| |||||| |||| ||||||||||||||||||||||||||| |||||  ||  ||    |||||||||||||||||| |    
T  44630575 caggtatttaaaattaaacaccactatttaaacaatactaatgtgtgtgttctattttatgtgggacctccaagttctatttttttcaattcacacaaca 44630476  T
Q  306 ctagatcaaaatttaataacttagtgtt 333  Q
    ||||||||||||||||||| || |||||    
T  44630475 ctagatcaaaatttaataaattggtgtt 44630448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 87 - 382
Target Start/End: Complemental strand, 15446532 - 15446235
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||||||| ||||  ||| |||||| ||||||||||| ||| || ||  |||||| ||||||||||| ||| ||||||| ||||||||| |||||| |    
T  15446532 aatgaaggaacgataagaaactcagttcgattctcaatcttatcacgacctacataagctaaaattatgtgaagtgatatccatgaataaaaaataataa 15446433  T
Q  187 ttattattattttcatcaatgtcagttattt-aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc-acacttt 284  Q
    |||||| || ||| | || | |||  ||||| ||||||||||||| | |||| |||||||||||||| ||||||||||||||||| |||||| ||||| |    
T  15446432 ttattactacttttaccattatcaagtatttaaaaattaaataccacaatttaaacactactaatgtatgtgttctattttatgtgggacccaacactct 15446333  T
Q  285 attttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||||||||||||||  | ||||  ||||| | | || |||| ||| ||||| |||||||||||| ||||| ||||| ||||| | |||||||||||    
T  15446332 attttttcaattcacattacactacctcaaagtcttattactttgtgcttaatttttcaaccttcctatttcgttccaacttcaaatcaatgttccaa 15446235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 145 - 340
Target Start/End: Original strand, 29678584 - 29678780
Alignment:
Q  145 ctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacact 244  Q
    ||||| ||||||||| |||||| |  ||||||| |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| ||||||    
T  29678584 ctaaatttatgggaagtgatattttcgaataaa-aataataattactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacact 29678682  T
Q  245 actaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||||||||||||| |||  || ||||| |||||||||||||||||||| | ||||||||||| ||||  |||||| |||||||||    
T  29678683 actaatgtgtgtgttctattttatgtgggatccctacactctattttttcaattcacacaacattagatcaaaatataattccttagtatttaatctt 29678780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 25496541 - 25496378
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--c 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||  |    
T  25496541 aataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctc 25496442  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||||| ||||||||| | |||| | || ||||||||||||    
T  25496441 cacactctattttttcaattcacacaatattagatcaaagtataattatttggtgtttaatctt 25496378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 30651853 - 30652020
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||  |||  ||    
T  30651853 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccc 30651952  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  30651953 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 30652020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 12797868 - 12798032
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga---c 275  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||   |    
T  12797868 aataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctc 12797967  T
Q  276 ccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||| |||||||||||||||||||| | ||||||||| | |||| | || ||||||||||||    
T  12797968 ccacactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttaatctt 12798032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 18345389 - 18345518
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactaga 310  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  |||||||| |||||||| ||||||||||| | ||||    
T  18345389 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctatttttttaattcacacaacattaga 18345488  T
Q  311 tcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| | |||| |||| ||||||||||||    
T  18345489 tcaaagtataattacttggtgtttaatctt 18345518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 213 - 340
Target Start/End: Complemental strand, 17974473 - 17974345
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac-ccacactttattttttcaattcacacaatactagat 311  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| | |||||    
T  17974473 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacaccacactctattttttcaattcacacaacattagat 17974374  T
Q  312 caaaatttaataacttagtgtttaatctt 340  Q
    |||| | |||| | ||  |||||||||||    
T  17974373 caaagtataattatttgatgtttaatctt 17974345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 340
Target Start/End: Complemental strand, 17968086 - 17967958
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-cccacactttattttttcaattcacacaatactagat 311  Q
    |||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||| ||| |||||||| |||||||| ||||||||||| | |||||    
T  17968086 tatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgtgggaccccacactctatttttttaattcacacaacattagat 17967987  T
Q  312 caaaatttaataacttagtgtttaatctt 340  Q
    |||| | |||| ||||  |||||||||||    
T  17967986 caaagtataattacttgatgtttaatctt 17967958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 25477446 - 25477283
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--c 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||  |    
T  25477446 aataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtaagaccac 25477347  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||| ||||| ||||| | || |||||| | |||| | ||  |||||||||||    
T  25477346 cacactctatttttttaattcgcacaacattaaatcaaagtataattatttgatgtttaatctt 25477283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 9179884 - 9179720
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||    
T  9179884 aataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 9179786  T
Q  277 cacacttta--ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| ||  |||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  9179785 cacactctattttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctt 9179720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 9184575 - 9184411
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||| ||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||    
T  9184575 aataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 9184477  T
Q  277 cacacttta--ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| ||  |||||||||||||||||| | ||||||||| |||||| | || ||||||||||||    
T  9184476 cacactctattttttttcaattcacacaacattagatcaaagtttaattatttggtgtttaatctt 9184411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 186 - 340
Target Start/End: Original strand, 12361195 - 12361347
Alignment:
Q  186 attattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacacttta 285  Q
    |||| ||||||||| |||| | ||| ||||||||||||||||||| | |||| |||||||||||||||| |  |||||||||||| | ||||||| | ||    
T  12361195 attactattatttttatcattatcaattatttaaaattaaataccacaatttaaacactactaatgtgtct--tctattttatgtggaacccacattcta 12361292  T
Q  286 ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||||| | ||||||||| | |||| | || ||||||||||||    
T  12361293 ttttttcaattcacacaacattagatcaaagtataattatttggtgtttaatctt 12361347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 152 - 303
Target Start/End: Complemental strand, 24537206 - 24537054
Alignment:
Q  152 tatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatg 251  Q
    |||||||||||||||  | ||||||| |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||   ||| |||||||||||||    
T  24537206 tatgggaaatgatattcacgaataaa-aataataattactattatttttatcattatcaagtatttaaaattaaataccgtagtttaaacactactaatg 24537108  T
Q  252 tgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaa 303  Q
    | |||||| |||||||||| |||  |||||||| ||||||||||||||||||||    
T  24537107 tatgtgttatattttatgtgggacccccacactctattttttcaattcacacaa 24537054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 87 - 294
Target Start/End: Complemental strand, 40846830 - 40846622
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||||||||||||  ||||||| ||| ||||| | || ||| ||||| | ||||| ||||| |||| |||| ||||||  |  |||||| |||||  |    
T  40846830 aatgaaggaaagataagaaattcaattgaattcttattcttatcacaaccatcataaactaaatttataggaagtgatattcacaaataaa-aataaaaa 40846732  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacacttt 284  Q
    ||| ||||||||| || | | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  |||||||| |    
T  40846731 ttactattatttttattattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggatccccacactct 40846632  T
Q  285 attttttcaa 294  Q
    ||||||||||    
T  40846631 attttttcaa 40846622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 19891662 - 19891501
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||| |||  ||||||||||||||||||| |||  ||    
T  19891662 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactaataa--tgtgtgttctattttatgtgggactcc 19891565  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||| | |||||||||||||||||||| | ||||||||| | |||| || | ||||||||||||    
T  19891564 cacattctattttttcaattcacacaagattagatcaaagtataattacatggtgtttaatctt 19891501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 19896923 - 19897050
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactaga 310  Q
    |||||||||||||||||||| |||| |||||||||||  ||||||||||||||||||| |||  ||||| || |||||||||||||||||||| | || |    
T  19896923 tatttaaaattaaataccgcaatttaaacactactaa--tgtgtgttctattttatgtgggacccccacgctctattttttcaattcacacaacattata 19897020  T
Q  311 tcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||| |||| ||||  | |||||||||    
T  19897021 tcaaaatataattacttgatatttaatctt 19897050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 217 - 340
Target Start/End: Complemental strand, 20101769 - 20101644
Alignment:
Q  217 taaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatcaa 314  Q
    ||||||||||||| |  |||| || ||||||||||||| ||||||||||||||| | ||||  ||||| |||||||||||||||||||| | ||||||||    
T  20101769 taaaattaaatacagtaatttaaatactactaatgtgtatgttctattttatgtggaaccccgacactctattttttcaattcacacaacattagatcaa 20101670  T
Q  315 aatttaataacttagtgtttaatctt 340  Q
    | | |||| |||| ||||||||||||    
T  20101669 agtataattacttggtgtttaatctt 20101644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 87 - 270
Target Start/End: Complemental strand, 12002153 - 12001965
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||||||||||||||||||| |||| ||||| | || ||| ||||  |||||||  |||| ||||||||| ||||||| | ||||||| |||||| |    
T  12002153 aatgaaggaaagatagaaaattcggttgaattcttattcttatcacaatcaacataagttaaatttatgggaagtgatatccacgaataaa-aataataa 12002055  T
Q  187 ttattattattttcatcaatgtcagt------tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgt 270  Q
    ||| ||||||||| |||| | ||| |      |||| ||||||||||| ||| |||  |||||||||||||||||| || ||||||||||    
T  12002054 ttactattatttttatcattatcaattacaaatattaaaaattaaatatcgcaattcaaacactactaatgtgtgtattttattttatgt 12001965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 344
Target Start/End: Complemental strand, 1934092 - 1933999
Alignment:
Q  253 gtgtgttctattttatgtaggacc--cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||||||||||||||| |||||  | |||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  1934092 gtgtgttctattttatgtgggacctccccactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 1933999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 90 - 298
Target Start/End: Complemental strand, 25638009 - 25637801
Alignment:
Q  90 gaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatc-tatgaataaagaataattatt 188  Q
    |||||||||||||| || | ||||| ||| | | || ||| ||||| ||| ||| ||||| ||||| ||| ||||||| || ||||||| |||||| |||    
T  25638009 gaaggaaagatagagaacttagttgaatttttattcttatcacaactaac-taaactaaatttatgagaagtgatatcctaagaataaa-aataataatt 25637912  T
Q  189 attattattttcatcaatgtcagttatttaaaa-ttaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccaca--cttta 285  Q
    | ||||||||| |||| | |||  ||||||||| |||||||||||  ||| ||||||||||||||  |||||||||||||||| |||||||||  || ||    
T  25637911 actattatttttatcattatcaagtatttaaaaattaaataccgcagtttaaacactactaatgt--gtgttctattttatgtgggacccacaatctcta 25637814  T
Q  286 ttttttcaattca 298  Q
     ||||||||||||    
T  25637813 atttttcaattca 25637801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 113 - 356
Target Start/End: Original strand, 32080250 - 32080496
Alignment:
Q  113 tggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagt 212  Q
    ||||||||||||| ||| ||||| ||| ||| | |||||||||| || || |||   |||||||| || ||| |||| ||||||||| |||| | ||||     
T  32080250 tggattctcaatcttatcacaaccaacgtaagcaaaaattatggaaagtggtatgcttgaataaaaaa-aataattactattatttttatcattatcagg 32080348  T
Q  213 tatttaaaa-ttaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc--cacactttatttt-ttcaattcacacaatacta 308  Q
    || |||||| ||||||| |   || | || |||| |||| ||||||||||||||||||| |||||  || ||| |||||| |||||||||||||||| |     
T  32080349 tacttaaaaattaaatatcataatataaatactattaatatgtgtgttctattttatgtgggacctccaaactctatttttttcaattcacacaatattg 32080448  T
Q  309 gatcaaaatttaataacttagtgtttaatctttcaaccttccaatttc 356  Q
    | ||||| | | || |||| |||||| ||||| |||||||||||||||    
T  32080449 gttcaaagtctcatgacttggtgtttgatcttccaaccttccaatttc 32080496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 19577852 - 19577741
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||||||| |||||||| ||| |||||||||||||| ||| | ||  ||| | | ||||||||||| ||| |||||| |||||||||| |||||| |    
T  19577852 aatgaaggaaatatagaaaactca-ttggattctcaatcttatcaaaatcaacgtgaactaaaattatgcgaagtgatatttatgaataaaaaataataa 19577754  T
Q  187 ttattattatttt 199  Q
    ||| |||||||||    
T  19577753 ttagtattatttt 19577741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 31327515 - 31327549
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaa 53  Q
    |||||||||||||||||||||||||||||||||||    
T  31327515 agctcaagtaacaaactaatcggataagttcaaaa 31327549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 31334236 - 31334270
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaa 53  Q
    |||||||||||||||||||||||||||||||||||    
T  31334236 agctcaagtaacaaactaatcggataagttcaaaa 31334270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 7736706 - 7736652
Alignment:
Q  329 gtgtttaatctttcaaccttccaa-tttctttccatcttcacaccaatgttccaa 382  Q
    |||||||||||| ||||||||||| ||| |||| | |||||||||||||||||||    
T  7736706 gtgtttaatcttccaaccttccaattttttttctaacttcacaccaatgttccaa 7736652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 177
Target Start/End: Complemental strand, 23853663 - 23853573
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaa 177  Q
    ||||||| ||| |||| ||| ||| ||||||| |||||| ||| | ||  ||||||| ||||||||||| ||| |||||||||| ||||||    
T  23853663 aatgaagaaaatataggaaactcaattggattttcaatcttatcataaacaacataaactaaaattatgagaagtgatatctataaataaa 23853573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 27414361 - 27414293
Alignment:
Q  104 aaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatga 172  Q
    ||||||||||||||||||| || ||| ||||  ||||||  |||||||| |||||| ||||||| ||||    
T  27414361 aaattcagttggattctcattcttatcacaattaacatatgctaaaattgtgggaagtgatatccatga 27414293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 34495251 - 34495183
Alignment:
Q  191 tattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgtt 259  Q
    ||||||||| |||| | |||  ||||||||||||||||| || |||| ||||||| |||| ||||||||    
T  34495251 tattatttttatcattatcaagtatttaaaattaaatactgcaatttaaacactaataatatgtgtgtt 34495183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 21 - 382
Target Start/End: Complemental strand, 35679214 - 35678850
Alignment:
Q  21 ctcaagtaacaaactaatcggataagttcaaaataaa-caaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggattc 119  Q
    ||||||||||||||||||| |||||||||||||  || |||||||||||||||||||        |||||||||||||||||  ||||||||||||||||    
T  35679214 ctcaagtaacaaactaatcagataagttcaaaaagaagcaaatccacaagattagcttaaacaaactaatgaaggaaagatatgaaattcagttggattc 35679115  T
Q  120 tcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaa 219  Q
    | |||| ||| ||||||||||||||||||||||||||||| | ||||| ||||||||| |||||| || |||||||||| ||||| | |||| |||||||    
T  35679114 ttaatcttatcacaacaaacataacctaaaattatgggaagtaatatccatgaataaaaaataataataattattatttgcatcattatcaggtatttaa 35679015  T
Q  220 aattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatcaaaat 317  Q
    ||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||| |  ||||| |||||||||||||||||||| ||||||||||| |    
T  35679014 aataaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggactcttacactctattttttcaattcacacaacactagatcaaagt 35678915  T
Q  318 ttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||| ||||  ||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  35678914 ttaattacttgatgtttaatcttccaaccttccaatttctttccatctgcacaccaatgttccaa 35678850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 19 - 382
Target Start/End: Complemental strand, 9726084 - 9725725
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    ||||||| |||||||||||||||||||||| ||||  ||||||| |||||||||||| ||       |||||||||||||||||||||||||||||||||    
T  9726084 agctcaaataacaaactaatcggataagtttaaaaagaaacaaacccacaagattagatgaaacaaactaatgaaggaaagatagaaaattcagttggat 9725985  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| |||| ||||||||||||||||||||  || ||||||| ||||||||| ||| |||||||||||||| ||||||| | || | |||||    
T  9725984 tctcaatcttatcacaataaacataacctaaaattatgaaaagtgatatc-atgaataaaaaattattattattattatcttcatcattatccggtattt 9725886  T
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacacttta-ttttttcaattcacacaatactagatcaa 314  Q
    ||||||||||||| |||||| ||||||       ||||||||||||||||||| ||||  ||||||| || |||||||||||||||||| |||| |||||    
T  9725885 aaaattaaataccactatttaaacact-------tgtgtgttctattttatgtgggacatccacactctatttttttcaattcacacaacactatatcaa 9725793  T
Q  315 aatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    | ||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  9725792 agtttaataacttggtgtttaatcttccaaccttccaatttctttccatcttgacaccaatgttccaa 9725725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 19 - 381
Target Start/End: Original strand, 4872665 - 4873025
Alignment:
Q  19 agctcaagtaacaaactaatcggataagttcaaaataaacaaatc-cacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggat 117  Q
    ||||||||||||||||| |||||||||||| |||| ||| |||   |||||||||| |||       |||||||| |||| |||| ||||||||||||||    
T  4872665 agctcaagtaacaaactgatcggataagttaaaaaaaaaaaaaaaacacaagattaactgaaacaaactaatgaatgaaatataggaaattcagttggat 4872764  T
Q  118 tctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt 217  Q
    |||||||| ||| ||||||||||||||||||| ||||||| | ||||||| |||||||||||||||| ||||||||||||||||||| ||     |||||    
T  4872765 tctcaatcttatcacaacaaacataacctaaagttatggggagtgatatccatgaataaagaataataattattattattttcatcattg-----tattt 4872859  T
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaa 315  Q
    ||||||||||| | |||||| |||||||||| ||||||||||||||||||| | | |  |||||||| |||||||||||||||||||| |||| ||||||    
T  4872860 aaaattaaatatcactatttaaacactactattgtgtgtgttctattttatatggaacccccacactctattttttcaattcacacaacactaaatcaaa 4872959  T
Q  316 atttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttcca 381  Q
     |||||||| || |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||    
T  4872960 gtttaataatttggtgtttaatcttccaacctttcaatttctttccatcttcacaccaaagttcca 4873025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 87 - 382
Target Start/End: Original strand, 17162704 - 17163001
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||| |||||||| ||| ||||||||| |||||||| ||| ||||||||| |||  ||| | ||||| || |||||||  |||||||| || ||| |    
T  17162704 aatgaagaaaagataggaaactcagttggactctcaatcttatcacaacaaacgtaagttaagactatggaaagtgatatccttgaataaaaaa-aatca 17162802  T
Q  187 ttattattattttcatcaatgtcagttatttaaaa-ttaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactt 283  Q
    ||| ||||||||| |||| | |||| ||||||||| ||||||||| | |||| ||||| |||||||||||||||||||||||||| |||  |||||| |     
T  17162803 ttactattatttttatcattatcaggtatttaaaaattaaatacctcaatttaaacaccactaatgtgtgtgttctattttatgtgggactcccacattc 17162902  T
Q  284 tattttttcaattcacacaatactagatcaaaatttaa-taacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||||||||||||| |||| | ||||||| ||| ||| |||||| ||||||| |||| |||||||| |||||| ||  | |||||| ||||||||||||    
T  17162903 tattttttcaattcatacaacattagatcataatctaattaacttggtgtttagtcttccaaccttcaaatttcctt-taacttcactccaatgttccaa 17163001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 37247956 - 37247789
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||  |||  ||    
T  37247956 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccc 37247857  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  37247856 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 37247789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 6154589 - 6154429
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||    
T  6154589 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 6154490  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaat 337  Q
    |||||| |||||||||||||||||||| | ||||||||||| |||| ||||  ||||||||    
T  6154489 cacactctattttttcaattcacacaacattagatcaaaatataattacttgatgtttaat 6154429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 26668217 - 26668380
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||    
T  26668217 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 26668316  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| | || ||||||||||||    
T  26668317 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttaatctt 26668380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 26939814 - 26939977
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||    
T  26939814 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 26939913  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| | || ||||||||||||    
T  26939914 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttaatctt 26939977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 29167130 - 29166967
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc-- 276  Q
    |||||| |||| |||| |||| |||| | |||  |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||      
T  29167130 aataataattactattgtttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtaggaccct 29167031  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||| | || |||||| | |||| |||| ||||||||||||    
T  29167030 cacactctattttttcaattcacacaacattaaatcaaagtataattacttggtgtttaatctt 29166967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 87 - 313
Target Start/End: Original strand, 17159223 - 17159452
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||| |||||||| ||| | ||||||| | |||||| ||| ||||||||| ||| | || | ||||| || |||||||  |||||||| |||||| |    
T  17159223 aatgaagaaaagataggaaacttagttggagtttcaatcttatcacaacaaacgtaagccaagactatggaaattgatatccttgaataaaaaataatca 17159322  T
Q  187 ttattattattttcatcaatgtcagttatttaaaa-ttaaataccgctattttaacactactaatgtgtgtgttctattttatgtagg--acccacactt 283  Q
    ||| ||||||||| |||| | |||| ||||||||| ||||||||| | |||  |||||||||||||||||| ||||||||||||| ||  ||||||| |     
T  17159323 ttactattatttttatcattatcaggtatttaaaaattaaatacctcaattaaaacactactaatgtgtgtcttctattttatgtgggacacccacattc 17159422  T
Q  284 tattttttcaattcacacaatactagatca 313  Q
    ||||||||||||||| |||| |||||||||    
T  17159423 tattttttcaattcatacaacactagatca 17159452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 87 - 356
Target Start/End: Original strand, 23688916 - 23689189
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaag--aataat 184  Q
    ||||||||||| |||||||| |  |||||||||| |||| |||  |||| ||||||  ||||  || |||||||||||||| || || |||   ||| ||    
T  23688916 aatgaaggaaatatagaaaactacgttggattctaaatcttatcgcaaccaacataggctaatgttttgggaaatgatatccatcaaaaaaacaaattat 23689015  T
Q  185 tattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacact 282  Q
     |||| ||||||||| | || | | || |||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| |||  ||||||||    
T  23689016 aattactattatttttaccattataaggtatttaaaattaaataccacaattttaacactacgaatgtgtgtgttctattttatgtgggatccccacact 23689115  T
Q  283 ttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttc 356  Q
      ||||||||||| |||| |  ||||||||||| | ||||   || |||||||||||| ||||||| |||||||    
T  23689116 caattttttcaatccacaaatcactagatcaaagtctaattgtttggtgtttaatcttccaacctttcaatttc 23689189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 7452728 - 7452857
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactaga 310  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||| | ||||    
T  7452728 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattcacacaacattaga 7452827  T
Q  311 tcaaaatttaataacttagtgtttaatctt 340  Q
    ||| | | |||| |||| ||||||||||||    
T  7452828 tcagagtataattactttgtgtttaatctt 7452857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 10759518 - 10759356
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc- 277  Q
    |||||| |||| ||||||||| |||| | |||  ||||||||||||||||| || |||| |||||||||||||||| ||||||||||||||| ||||||     
T  10759518 aataataattactattatttttatcattatcaagtatttaaaattaaatactgcaatttaaacactactaatgtgtctgttctattttatgtgggacccc 10759419  T
Q  278 -acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
     ||||| |||||||| ||||||||||| | || |||||||| |||| |||| ||||||||||||    
T  10759418 tacactctatttttttaattcacacaacattaaatcaaaatataattactt-gtgtttaatctt 10759356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 37537095 - 37536931
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactacta--atgtgtgtgttctattttatgtagga-c 275  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||||||  |||||||||||||||||||||| ||| |    
T  37537095 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgtgttctattttatgtgggacc 37536996  T
Q  276 ccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||| |||||||||||||||||||| | || |||||| | |||| ||||  |||||||||||    
T  37536995 ccacactctattttttcaattcacacaacattatatcaaagtataattacttgatgtttaatctt 37536931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 213 - 322
Target Start/End: Complemental strand, 6511726 - 6511615
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactaga 310  Q
    ||||||||||||||||| || |||| ||||||||||||||||| |||||||||||||| |||  ||||||||| ||||||||||||||||||| | ||||    
T  6511726 tatttaaaattaaatactgcaatttaaacactactaatgtgtgagttctattttatgtgggactcccacacttaattttttcaattcacacaacattaga 6511627  T
Q  311 tcaaaatttaat 322  Q
    ||||||| ||||    
T  6511626 tcaaaatataat 6511615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 90 - 340
Target Start/End: Complemental strand, 20180395 - 20180149
Alignment:
Q  90 gaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattatta 189  Q
    |||||||| |||  ||||||| ||  ||||| | || ||| ||||| | ||||| ||||| |||| |||| ||||||    ||||||| |||||| ||||    
T  20180395 gaaggaaatataagaaattcaattaaattcttattcttatcacaaccaccataagctaaatttataggaagtgatattctcgaataaa-aataataatta 20180297  T
Q  190 ttattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttatttt 289  Q
     ||||||||| |||| | |||   ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||| || ||||||   ||||||    
T  20180296 ctattatttttatcattatca---atttaaaattaaataccgtaatttaaacactactaatgtgtgtgttctattttatgtgggtcccacatcctatttt 20180200  T
Q  290 ttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
     ||||||||||||| | ||||| ||| | |||| |||| ||||||||||||    
T  20180199 ctcaattcacacaacattagattaaagtataattacttggtgtttaatctt 20180149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 37646214 - 37646049
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaat--gtgtgtgttctattttatgtaggacc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||| ||||  |||||||||||||||||||| |||||    
T  37646214 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactaataatatgtgtgtgttctattttatgtgggacc 37646115  T
Q  277 c--acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |  ||||| |||||||||||||||||||| | ||||||||| | |||| ||||  |||||||||||    
T  37646114 cccacactctattttttcaattcacacaacattagatcaaagtataattacttgatgtttaatctt 37646049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 36424611 - 36424740
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactaga 310  Q
    |||||||||||||||||| | |||| | ||||||||||||||||||||||||||||||  ||  |||||||| |||||||||||||||||||| | ||||    
T  36424611 tatttaaaattaaataccacaatttaagcactactaatgtgtgtgttctattttatgtgagacccccacactctattttttcaattcacacaacattaga 36424710  T
Q  311 tcaaaatttaataacttagtgtttaatctt 340  Q
    ||| | | |||| |||| ||||||||||||    
T  36424711 tcatagtataattacttggtgtttaatctt 36424740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 213 - 294
Target Start/End: Original strand, 40148816 - 40148897
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttttcaa 294  Q
    |||||||||||||||||||| |||| |||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||    
T  40148816 tatttaaaattaaataccgcaatttaaacactactaatgtgtttgttctattttatgtgggacccacactctattttttcaa 40148897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 213 - 322
Target Start/End: Original strand, 36430491 - 36430602
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactaga 310  Q
    ||||||||||||||||||   |||| |||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||| | ||||    
T  36430491 tatttaaaattaaataccataatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttcaattcacacaacattaga 36430590  T
Q  311 tcaaaatttaat 322  Q
    | ||||| ||||    
T  36430591 ttaaaatataat 36430602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 254 - 387
Target Start/End: Complemental strand, 22832587 - 22832453
Alignment:
Q  254 tgtgttctattttatgtaggacc--cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttcca 351  Q
    ||||||||||||||||| ||||   |||||| |||||||||||||||||||| |||| |||| ||| ||||  ||| |||||||||||| ||||||| ||    
T  22832587 tgtgttctattttatgt-ggactttcacactctattttttcaattcacacaacactaaatcataatctaattccttggtgtttaatcttccaaccttaca 22832489  T
Q  352 atttctttccatcttcacaccaatgttccaatacat 387  Q
    ||||| || || ||||||||||||||||||| ||||    
T  22832488 atttcctttcaacttcacaccaatgttccaacacat 22832453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 112 - 303
Target Start/End: Original strand, 15149537 - 15149727
Alignment:
Q  112 ttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcag 211  Q
    |||||| ||||||| |||  ||| |||| ||  ||||||||||  ||||||||||  ||||||||| |||||| |||| ||||||||| |||| | ||||    
T  15149537 ttggatactcaatcttatcgcaataaacgtaggctaaaattataagaaatgatatgcatgaataaaaaataataattactattatttttatcattatcag 15149636  T
Q  212 ttatttaaaa-ttaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaa 303  Q
     ||| ||||| ||||||| |   |||| ||||||| |||||||  ||||||||||||| ||||||||||||||| |||||| |||||| ||||    
T  15149637 atatctaaaaattaaatatcttaatttaaacactattaatgtg--tgttctattttatataggacccacacttttttttttaaattcatacaa 15149727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 282
Target Start/End: Original strand, 12104005 - 12104096
Alignment:
Q  191 tattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacact 282  Q
    ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||| |||||| ||||    
T  12104005 tattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttccattttatgtgggacccccact 12104096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 247 - 344
Target Start/End: Original strand, 39519392 - 39519491
Alignment:
Q  247 taatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||||||||||||||||||||  ||||||  ||||| |||||||||||||||||||| | ||||||||| | || | |||| ||||||||||||||||    
T  39519392 taatgtgtgtgttctattttatgcgggacccccacactctattttttcaattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaa 39519491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 23757261 - 23757158
Alignment:
Q  239 aacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaa 336  Q
    ||||||| |||||||||||||||||||| ||| ||||||  ||||| |||||||||||||||||||| | || ||| || | |||| |||| ||||||||    
T  23757261 aacactaataatgtgtgtgttctattttgtgtgggacccccacactctattttttcaattcacacaacattaaatctaagtataattacttggtgtttaa 23757162  T
Q  337 tctt 340  Q
    ||||    
T  23757161 tctt 23757158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 340
Target Start/End: Complemental strand, 23822717 - 23822614
Alignment:
Q  239 aacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaa 336  Q
    ||||||| |||||||||||||||||||| ||| ||||||  ||||| |||||||||||||||||||| | || ||| || | |||| |||| ||||||||    
T  23822717 aacactaataatgtgtgtgttctattttgtgtgggacccccacactctattttttcaattcacacaacattaaatctaagtataattacttggtgtttaa 23822618  T
Q  337 tctt 340  Q
    ||||    
T  23822617 tctt 23822614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 247 - 344
Target Start/End: Original strand, 39524031 - 39524130
Alignment:
Q  247 taatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||||||||||||||||||||  ||||||  ||||| |||||||||||||||||||| | ||||||||| | || | | || ||||||||||||||||    
T  39524031 taatgtgtgtgttctattttatgctggacccccacactctattttttcaattcacacaacattagatcaaagtatatttatttggtgtttaatctttcaa 39524130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 40567752 - 40567670
Alignment:
Q  186 attattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttat 268  Q
    |||| ||||||||| |||| | | || |||||||||||||||||| | |||| | ||||||||| ||||||||| ||||||||    
T  40567752 attactattatttttatcattataagatatttaaaattaaataccacaatttaatcactactaacgtgtgtgttttattttat 40567670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 22832767 - 22832656
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||||||||||||  | ||||| |||||||| || || ||| ||||  ||||||| |||||| ||||| || ||||| | ||||||||| |||||| |    
T  22832767 aatgaaggaaagataagatattcaattggattcacattcttatcacaaacaacataaactaaaactatggaaagtgata-ccatgaataaaaaataataa 22832669  T
Q  187 ttattattatttt 199  Q
    ||| |||||||||    
T  22832668 ttactattatttt 22832656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 15413940 - 15413853
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaat 174  Q
    |||||||||||||||| ||||||| ||| ||||| | || ||| ||||| ||| |||  |||| ||||||||| ||||||| ||||||    
T  15413940 aatgaaggaaagataggaaattcacttgaattcttattcttatcacaaccaacgtaagttaaatttatgggaagtgatatccatgaat 15413853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 346 - 388
Target Start/End: Complemental strand, 16115198 - 16115156
Alignment:
Q  346 cttccaatttctttccatcttcacaccaatgttccaatacata 388  Q
    ||||||||||||||||| |||||||| |||||||||| |||||    
T  16115198 cttccaatttctttccaacttcacacgaatgttccaacacata 16115156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 286 - 340
Target Start/End: Original strand, 40150243 - 40150297
Alignment:
Q  286 ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  40150243 ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctt 40150297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 16115352 - 16115295
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgt 270  Q
    |||||||||||||| ||||  |||| |||| ||||||||||||||||  |||||||||    
T  16115352 tatttaaaattaaacaccgtaatttaaacattactaatgtgtgtgtttcattttatgt 16115295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 22 - 382
Target Start/End: Original strand, 29351008 - 29351372
Alignment:
Q  22 tcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggattct 120  Q
    |||||||||||| |||||||||||||||||||  ||||||| |||||||||||| |        |||||||||||||||||| ||||||||||| ||| |    
T  29351008 tcaagtaacaaattaatcggataagttcaaaaagaaacaaacccacaagattagataaaacaaactaatgaaggaaagataggaaattcagttgaatttt 29351107  T
Q  121 caatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaa 220  Q
    ||||| ||| ||||||||||||| ||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||||| | |||| ||||||||    
T  29351108 caatcttatcacaacaaacataatctaaaattatgagaagtgatatccatgaataaagaataataattattattattttcatcattatcagatatttaaa 29351207  T
Q  221 attaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacacttta-ttttttcaattcacacaatactagatcaaaat 317  Q
    |||||||||| |||||| ||||||| ||||||||||||| |||||||||| ||||  |||| ||||| |||||||||||||||||| ||| ||||||| |    
T  29351208 attaaataccactatttaaacactaataatgtgtgtgttttattttatgtgggacctccacgctttatttttttcaattcacacaacactggatcaaagt 29351307  T
Q  318 ttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  29351308 ttaataaattggtgtttaatcttccaaccttccaatttctttccatcttcacaccaatgttccaa 29351372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 11 - 382
Target Start/End: Complemental strand, 3656585 - 3656209
Alignment:
Q  11 cacagataagctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattc 109  Q
    ||||||| ||||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||       ||||||||  |||||||| ||||||    
T  3656585 cacagatcagctcaagtaacaaactaatcggataaattcaaaaagaaacaaacccacaagattagctgaaacaaactaatgaaaaaaagataggaaattc 3656486  T
Q  110 agttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattat---tattattttcatcaat 206  Q
    ||||| ||| |||||| ||| |||||||||||||| |||||||||| ||| ||||||| |||||||||||||||| || ||   |||||||||||||| |    
T  3656485 agttg-attatcaatcttatcacaacaaacataacataaaattatgagaagtgatatccatgaataaagaataataataataattattattttcatcatt 3656387  T
Q  207 gtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaat 304  Q
     |||| |||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||| ||||||  ||| | ||||||||||||||||||||     
T  3656386 atcaggtatttaaaattaaataccactatttaaacactactaatgtccgtgttctattttatgtgggacccctacattctattttttcaattcacacaac 3656287  T
Q  305 actagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    |||| |||||| |||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  3656286 actaaatcaaagtttaattacttggtgtttaatcttccaaccttccattttctttccatcttcacaccaatgttccaa 3656209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 85 - 382
Target Start/End: Complemental strand, 2207073 - 2206784
Alignment:
Q  85 ctaatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataat 184  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |||||||    |||||||||||||||||| ||||||| ||||||||||||||||    
T  2207073 ctaatgaaggaaagatagaaaattcagttgaattctcaatcatatcacaacaa----aacctaaaattatgggaagtgatatccatgaataaagaataat 2206978  T
Q  185 tattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagg--acccacact 282  Q
     || ||| |||||||||||| | |||| ||| ||||||||||||| ||||||| ||||||||| |    ||||||||||||||||| ||   ||||||||    
T  2206977 aataatt-ttattttcatcattatcagatatgtaaaattaaatactgctatttaaacactactga----tgtgttctattttatgtgggtcccccacact 2206883  T
Q  283 tta-ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttcca 381  Q
     || ||||||||||| |||||| |||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  2206882 ctatttttttcaatttacacaacacta-atcaaaatttaataacttggtgtttaa-cttccaaccttccaatttctttccattttcacaccaatgttcca 2206785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 18472945 - 18473108
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  ||    
T  18472945 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccc 18473044  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  18473045 cacactctattttttcaattcacacaacattagatcaaagtataattactttgtgtttaatctt 18473108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 139 - 340
Target Start/End: Original strand, 20520861 - 20521063
Alignment:
Q  139 cataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctatttt 238  Q
    ||||| ||||| ||||||||| ||||||    ||||||| |||||| |||| ||||||||| |||| | |||  |||||||| ||||||||||| ||||     
T  20520861 cataagctaaatttatgggaagtgatattctcgaataaa-aataataattactattatttttatcattatcaagtatttaaagttaaataccgcaattta 20520959  T
Q  239 aacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaa 336  Q
    |||||||||||||||||| ||||||||||||| |||  |||||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||    
T  20520960 aacactactaatgtgtgtattctattttatgtgggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaa 20521059  T
Q  337 tctt 340  Q
    ||||    
T  20521060 tctt 20521063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 7570372 - 7570205
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||  |||  ||    
T  7570372 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgcgggacccc 7570273  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  7570272 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 7570205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 23660646 - 23660479
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||||||||||||||||| |||||||||| |||   |    
T  23660646 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttttattttatgtgggagctc 23660547  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  23660546 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 23660479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 23665278 - 23665111
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||| | |||   |    
T  23665278 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatatgggagctc 23665179  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||||    
T  23665178 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaa 23665111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 87 - 340
Target Start/End: Original strand, 46964861 - 46965114
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||||||| |||  ||||||| ||  ||||| | || ||| ||||| | ||||| ||||| ||||| ||| ||||||    ||||||| ||||||||    
T  46964861 aatgaaggaaatataagaaattcaattaaattcttattcttatcacaaccaccataagctaaatttatgtgaagtgatattctcgaataaa-aataatta 46964959  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc--cacacttt 284  Q
    ||||||||||||| |||| | |||  ||||||||||||||||||||  ||| ||||||| ||||||||| |||||||||||||| || ||  |||||| |    
T  46964960 ttattattatttttatcattatcaagtatttaaaattaaataccgcagtttaaacacta-taatgtgtgagttctattttatgtggggccctcacactct 46965058  T
Q  285 attttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||||||||||||||| | ||||||||| | |||| | || ||||||||||||    
T  46965059 attttttcaattcacacaacattagatcaaagtataattatttggtgtttaatctt 46965114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 191 - 340
Target Start/End: Original strand, 55326728 - 55326878
Alignment:
Q  191 tattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattt 288  Q
    ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||  |||||||| |||||    
T  55326728 tattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactatattt 55326827  T
Q  289 tttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||||||||||| | |||||| |||| |||| |||| ||||||||||||    
T  55326828 tttcaattcacacaacattagatc-aaatataattacttggtgtttaatctt 55326878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 260 - 382
Target Start/End: Original strand, 38891137 - 38891260
Alignment:
Q  260 ctattttatgtaggacc-cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaaccttccaatttctt 358  Q
    ||||||||||| ||||| |||||| ||||||||||||||||| || | ||||||||| |||||| |||  |||||||||||| |||||||||||||||||    
T  38891137 ctattttatgtgggacctcacactatattttttcaattcacaaaacattagatcaaagtttaattactcggtgtttaatcttccaaccttccaatttctt 38891236  T
Q  359 tccatcttcacaccaatgttccaa 382  Q
    |||| |||||||||||||||||||    
T  38891237 tccaccttcacaccaatgttccaa 38891260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 14437847 - 14437687
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--c 276  Q
    |||||| |||||||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||  |||  |    
T  14437847 aataataattattattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagacctc 14437748  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| ||||||||||||||||||||    |||||||| | |||| |||| ||||||||||||    
T  14437747 cacactctattttttcaattcacacaa---cagatcaaagtataattacttggtgtttaatctt 14437687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 757520 - 757358
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||  ||  ||    
T  757520 aataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagacccc 757422  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||| |||||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  757421 cacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctt 757358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 340
Target Start/End: Original strand, 18468151 - 18468314
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtag-gaccc 277  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||   |||    
T  18468151 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatattatgtagaccccc 18468250  T
Q  278 acacttta-ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| || |||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  18468251 acactctatttttttcaattcacacaacattagatcaaactataattacttggtgtttaatctt 18468314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 139 - 340
Target Start/End: Complemental strand, 12971006 - 12970802
Alignment:
Q  139 cataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttc-atcaatgtc-agttatttaaaattaaataccgctatt 236  Q
    ||||| ||||| ||||||||| ||||||  | ||||||| |||||| |||| |||||||||  |||| | || |||  |||||||||||||||||| |||    
T  12971006 cataagctaaatttatgggaagtgatattcacgaataaa-aataataattactattattttttatcattatccagtattttaaaattaaataccgcaatt 12970908  T
Q  237 ttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgttt 334  Q
    | ||||||||||| |||||||||||||||||||| |||   |||||||||||||||||||||||||||| | || |||||  | |||| |||| ||||||    
T  12970907 taaacactactaaagtgtgtgttctattttatgtgggatcaccacactttattttttcaattcacacaacattaaatcaacgtataattacttggtgttt 12970808  T
Q  335 aatctt 340  Q
    ||||||    
T  12970807 aatctt 12970802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 146 - 345
Target Start/End: Original strand, 55432134 - 55432331
Alignment:
Q  146 taaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacacta 245  Q
    |||| ||||||||||||||||    ||||||| |||||| |||| ||| ||||| |||| | |||  ||||||||||||||||| || |||| |||||||    
T  55432134 taaatttatgggaaatgatattctcgaataaa-aataataattaatataatttttatcattatcaaatatttaaaattaaatactgcaatttaaacacta 55432232  T
Q  246 ctaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttca 343  Q
    ||||  ||||||||||||||| ||| |||  ||||||||||||||||||||||||||||  | |||||| |||| |||| |||| |||||||||||| ||    
T  55432233 ctaa--tgtgtgttctattttgtgtgggacccccacactttattttttcaattcacacagcattagatc-aaatataattacttggtgtttaatcttcca 55432329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 215 - 344
Target Start/End: Original strand, 20175368 - 20175496
Alignment:
Q  215 tttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc-acactttattttttcaattcacacaatactagatca 313  Q
    ||||||||||||||| || |||| || |||||||||||||||  |||||||||||| | |||| ||||| ||||||||||||| |||||| | |||||||    
T  20175368 tttaaaattaaatactgcaatttaaatactactaatgtgtgt--tctattttatgtggaaccccacactctattttttcaattaacacaacattagatca 20175465  T
Q  314 aaatttaataacttagtgtttaatctttcaa 344  Q
    || | |||| |||| ||||||||||||||||    
T  20175466 aagtataattacttggtgtttaatctttcaa 20175496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 179 - 303
Target Start/End: Original strand, 27709870 - 27709993
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-ccc 277  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||   || ||||||||||||||| ||| |||    
T  27709870 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaa--cgtatgttctattttatgtgggacccc 27709967  T
Q  278 acactttattttttcaattcacacaa 303  Q
    ||||| ||||||||||||||||||||    
T  27709968 acactctattttttcaattcacacaa 27709993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 139 - 338
Target Start/End: Complemental strand, 12965079 - 12964879
Alignment:
Q  139 cataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttattt-aaaattaaataccgctattt 237  Q
    ||||| ||||| ||||||||| |||||| |||| |||||  ||||| |||| ||||||||| |||| | |||  ||||| ||||||||||||||| ||||    
T  12965079 cataagctaaatttatgggaagtgatatttatgtataaa--ataataattactattatttttatcattatcaaatattttaaaattaaataccgcaattt 12964982  T
Q  238 taacactactaatgtgtgtgttctattttatgtaggac--ccacacttta-ttttttcaattcacacaatactagatcaaaatttaataacttagtgttt 334  Q
     ||||||||||| || |||||| |||||||||| ||||  ||||||| || |||||||||||||  ||| | || |||||| | |||| |||| ||||||    
T  12964981 aaacactactaaagtttgtgtt-tattttatgtgggaccaccacactctatttttttcaattcatgcaacattaaatcaaagtataattacttggtgttt 12964883  T
Q  335 aatc 338  Q
    ||||    
T  12964882 aatc 12964879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 39774982 - 39774891
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgt 270  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||| |||||||||||||||||||    
T  39774982 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgt 39774891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 12111771 - 12111623
Alignment:
Q  149 aattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactacta 248  Q
    ||||||||||| ||||||  | ||||||| |||||| |||| ||||||||| |||| | |||   ||||||||||||||||||  |||| |||| |||      
T  12111771 aattatgggaagtgatattcacgaataaa-aataataattactattatttttatcattatcaagcatttaaaattaaataccgaaatttaaacattacg- 12111674  T
Q  249 atgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaa 303  Q
        ||||||||||||||||||  ||||||||||||| |||||||||||||||||    
T  12111673 ----gtgtgttctattttatgtgagacccacactttactttttcaattcacacaa 12111623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 218 - 328
Target Start/End: Original strand, 7860686 - 7860798
Alignment:
Q  218 aaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatactagatcaaa 315  Q
    |||||||||||||   |||| ||||||| |||||||||||||||||||||||| ||||  ||||||| ||||||||||||||   ||| |||||||||||    
T  7860686 aaaattaaataccataatttaaacactattaatgtgtgtgttctattttatgtgggacctccacactctattttttcaattcgtccaaaactagatcaaa 7860785  T
Q  316 atttaataactta 328  Q
     | |||| |||||    
T  7860786 gtctaattactta 7860798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 214 - 341
Target Start/End: Original strand, 3426047 - 3426173
Alignment:
Q  214 atttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttattttttcaattcacacaatactagatca 313  Q
    |||||||||| ||||||||  ||| ||||||||||||||||| |||||||||||||| | |||| ||| || | |||| ||||||||||| |  |||| |    
T  3426047 atttaaaattgaataccgcagtttaaacactactaatgtgtgagttctattttatgtggtacccccacattctatttt-aattcacacaacataagatta 3426145  T
Q  314 aaatttaataacttagtgtttaatcttt 341  Q
    || | |||| |||| |||||||||||||    
T  3426146 aagtataattacttggtgtttaatcttt 3426173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 2207135 - 2207087
Alignment:
Q  14 agataagctcaagtaacaaactaatcggataagttc-aaaataaacaaa 61  Q
    |||| |||||||||||||||||||| |||||||||| |||| |||||||    
T  2207135 agatcagctcaagtaacaaactaattggataagttcaaaaagaaacaaa 2207087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 190; Significance: 1e-103; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 24 - 382
Target Start/End: Original strand, 26224 - 26585
Alignment:
Q  24 aagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggattctca 122  Q
    ||||||||||||||||||||||||||||||  |||||||  ||||||||||| ||       ||||||||||||||||||||||||||||||||||||||    
T  26224 aagtaacaaactaatcggataagttcaaaaagaaacaaacacacaagattagatgaaatagactaatgaaggaaagatagaaaattcagttggattctca 26323  T
Q  123 atcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaat 222  Q
    ||| ||| |||||||||||||||||||||||||| || ||||||| ||||||||| | |||| || || ||||||||||| | | |||| ||||||||||    
T  26324 atcttatcacaacaaacataacctaaaattatggaaagtgatatccatgaataaatattaataataataattattttcattattatcaggtatttaaaat 26423  T
Q  223 taaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatactagatcaaaattta 320  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||| ||||  || |||| ||||||||||||||||||||  |||||| ||| ||||    
T  26424 taaatacctctatttaaacactactaatgtgtgtgttctattttatgtgggacctccgcactctattttttcaattcacacaactctagatgaaagttta 26523  T
Q  321 ataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    || | || |||||||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  26524 attatttggtgtttaatcttccaaccttccaatttctttcaattttcacaccaatgttccaa 26585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 90 - 340
Target Start/End: Original strand, 30028 - 30279
Alignment:
Q  90 gaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattatta 189  Q
    |||||||| |||  ||||||| ||  ||||| | || ||| ||||| | ||||| ||||| ||||||||| ||||||    ||||||| |||||| ||||    
T  30028 gaaggaaatataagaaattcaattaaattcttattcttatcacaaccaccataaactaaatttatgggaagtgatattctcgaataaa-aataataatta 30126  T
Q  190 ttattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttatt 287  Q
     ||||||||| |||| | |||  || ||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||  || ||||| ||||    
T  30127 ctattatttttatcattatcatgtagttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggatccctacactctatt 30226  T
Q  288 ttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||| | ||||||||||| |||| |||| ||||||||||||    
T  30227 ttttcaattcacacaacattagatcaaaatataattacttggtgtttaatctt 30279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 105; Significance: 3e-52; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 217 - 382
Target Start/End: Complemental strand, 65013 - 64847
Alignment:
Q  217 taaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acactttattttttcaattcacacaatactagatcaa 314  Q
    |||| ||||||||| |||||| || ||||||||||||||||||||||||||||| ||||||  ||||| |||||||| ||||||||||| ||||||||||    
T  65013 taaatttaaataccactatttaaagactactaatgtgtgtgttctattttatgtgggacccctacactctatttttttaattcacacaacactagatcaa 64914  T
Q  315 aatttaataacttagtgtttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    | |||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  64913 agtttaattactt-gtgtttaatcttccaaccttccaatttctttccatcttcacaccaatgttccaa 64847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 85 - 321
Target Start/End: Complemental strand, 17953392 - 17953160
Alignment:
Q  85 ctaatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataat 184  Q
    |||||||||||||||||| |||||||||||||||||||||  |||  ||||||||||||  |||||||||||  | ||||||| ||||||||| || ||     
T  17953392 ctaatgaaggaaagataggaaattcagttggattctcaatattatcgcaacaaacataagataaaattatggagagtgatatccatgaataaaaaaaaaa 17953293  T
Q  185 tattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc-acactt 283  Q
        ||||||||||| ||||   ||||  ||||||||| ||||||| |||||  ||||||||| |||||||||||||||||| ||| | |||| |||||     
T  17953292 ----attattatttttatcataatcaggcatttaaaataaaataccactatta-aacactactgatgtgtgtgttctattttttgtggtaccccacactc 17953198  T
Q  284 tattttttcaattcacacaatactagatcaaaatttaa 321  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  17953197 tattttttcaattcacacaacactagatcaaagtttaa 17953160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 87 - 340
Target Start/End: Original strand, 1808299 - 1808552
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||||||| ||| |||||| | ||  ||||| | || ||| ||||| | ||||| ||||| |||| | ||||||||| |   |||||| |||||| |    
T  1808299 aatgaaggaaatataaaaaatttaattaaattcttattcttatcacaaccaccataagctaaatttatagaaaatgatattttcaaataaa-aataataa 1808397  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-cccacacttta 285  Q
    ||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||| | ||| |||||||| ||    
T  1808398 ttactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacacttctaatgtgtgtgttctattttatatgggaccccacactata 1808497  T
Q  286 ttttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    |||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||    
T  1808498 ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctt 1808552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 87 - 344
Target Start/End: Original strand, 7002494 - 7002751
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||| |||||||||||| | ||||||||||  |||| ||  ||||| |||| || |||||||||||| || |||| |||||||||| |    | | |    
T  7002494 aatgaagaaaagatagaaaactgagttggattcaaaatcttaacacaaccaacacaaactaaaattatggaaagtgatgtctatgaataca----attca 7002589  T
Q  187 ttattattattttcatcaatgtcagttattta--aaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacact 282  Q
    | ||||||||||| |||  | || | ||||||  |||||||||||| | |||| |||||||||||||| ||| |||||||||||||  ||  ||||||||    
T  7002590 taattattatttttatctttatcgggtatttagaaaattaaataccacaatttaaacactactaatgtatgtattctattttatgtgagatccccacact 7002689  T
Q  283 ttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
     |||||||||||||||||||||||||||||||| | |||| |||| ||||||||||||||||    
T  7002690 ctattttttcaattcacacaatactagatcaaagtctaattacttggtgtttaatctttcaa 7002751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 179 - 337
Target Start/End: Complemental strand, 38181439 - 38181279
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||  |     
T  38181439 aataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggactct 38181340  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaat 337  Q
    ||||||||||||||||||||||||||| | ||||||||| | |||| ||||  ||||||||    
T  38181339 cacactttattttttcaattcacacaacattagatcaaagtataattacttgatgtttaat 38181279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 344
Target Start/End: Complemental strand, 40125051 - 40124884
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| |||||||||||||||||||||||||||||||  |||  ||    
T  40125051 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggacccc 40124952  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | || | |||| ||||||||||||||||    
T  40124951 cacactctattttttcaattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaa 40124884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 87 - 340
Target Start/End: Complemental strand, 18875633 - 18875379
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    ||||||||||| |||  ||||| | ||  ||||| | |||||| ||||| | |||||  |||| |||||| |||||||||    ||||||| || ||| |    
T  18875633 aatgaaggaaatataagaaatttaatttaattcttattcatatcacaaccatcataagttaaatttatggaaaatgatattctcgaataaa-aacaataa 18875535  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc--acacttt 284  Q
    ||| ||||||||  |||| | |||  |||||||||||||||||||| |||| |||||||||||| ||||||||||||| ||||| ||||||  ||||  |    
T  18875534 ttactattatttgtatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatgtgtgttctattgtatgtgggacccctacacact 18875435  T
Q  285 attttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||||||||||||||| | |||||||||||||||| ||| ||| |||||||||    
T  18875434 attttttcaattcacacaacattagatcaaaatttaattactcagtatttaatctt 18875379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 146 - 340
Target Start/End: Complemental strand, 44925110 - 44924915
Alignment:
Q  146 taaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacacta 245  Q
    |||| ||||||||||||||||    ||||||| |||||| |||| | ||||||| |||| | |||  |||||||||||||||||||| |||| |||||||    
T  44925110 taaatttatgggaaatgatattctcgaataaa-aataataattactgttatttttatcattatcaagtatttaaaattaaataccgcaatttaaacacta 44925012  T
Q  246 ctaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||||||||| ||||||||||||| ||||  ||| ||| || ||||||||||||||||| | ||||||||| | ||||   |||||||||||||||    
T  44925011 ctaatgtgtgttttctattttatgtgggacctccaaactctaatttttcaattcacacaagattagatcaaagtataattgattagtgtttaatctt 44924915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 15950729 - 15950591
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--c 276  Q
    |||||||| ||||||| || |||||| | |||  |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| | ||  |    
T  15950729 aataattactattatttttatcatcattatcaagtatttaaaattaaataccgcaatttaaacactattaatgtgtgtgttctattttatgtggcacctc 15950630  T
Q  277 cacactttattttttcaattcacacaatactagatcaaa 315  Q
    |||||| |||||||||||||||||||| | |||||||||    
T  15950629 cacactctattttttcaattcacacaacattagatcaaa 15950591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 307
Target Start/End: Original strand, 33417469 - 33417599
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggaccc- 277  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||  |||||     
T  33417469 aataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagaccca 33417568  T
Q  278 -acactttattttttcaattcacacaatact 307  Q
     ||||| ||||||||||||||||||||||||    
T  33417569 tacactctattttttcaattcacacaatact 33417599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 92 - 341
Target Start/End: Original strand, 26779957 - 26780206
Alignment:
Q  92 aggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattattatt 191  Q
    ||||||||||  ||||||| ||| ||||| | || ||| ||||| | |||||  |||| ||||| |||  |||||  | ||||||| |||||| |||| |    
T  26779957 aggaaagataagaaattcaattgaattcttattcttatcacaaccatcataagttaaatttatgagaagagatattcacgaataaa-aataataattact 26780055  T
Q  192 attattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagg--acccacactttatttt 289  Q
    ||| |||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||  ||||||||| ||  ||    
T  26780056 attgtttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacacccacactcta-gtt 26780154  T
Q  290 ttcaattcacacaatactagatcaaaatttaataacttagtgtttaatcttt 341  Q
    |||||||||||||| | || || | | | |||| ||||||||||||||||||    
T  26780155 ttcaattcacacaacattaaattagagtataattacttagtgtttaatcttt 26780206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 213 - 340
Target Start/End: Complemental strand, 1910070 - 1909941
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacactttattttttcaattcacacaatactaga 310  Q
    |||||||||||||||||| || ||| ||||||||||||||||| | ||||||| |||| ||||  ||||||| |||||||||||||||||||| | ||||    
T  1910070 tatttaaaattaaataccactgtttaaacactactaatgtgtgagctctatttcatgtgggacatccacactctattttttcaattcacacaacattaga 1909971  T
Q  311 tcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| | |||| |||| ||||||||||||    
T  1909970 tcaaagtataattacttggtgtttaatctt 1909941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 170 - 292
Target Start/End: Complemental strand, 28559281 - 28559158
Alignment:
Q  170 tgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatg 269  Q
    |||||||| |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  28559281 tgaataaa-aataataattactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatg 28559183  T
Q  270 taggac--ccacactttattttttc 292  Q
    | ||||  ||||||| |||||||||    
T  28559182 tgggacctccacactctattttttc 28559158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 2966558 - 2966687
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacc--cacactttattttttcaattcacacaatactaga 310  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||||  |||||| |||||||||||||| || || | ||||    
T  2966558 tatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatatgggaccctcacactctattttttcaattcccataacattaga 2966657  T
Q  311 tcaaaatttaataacttagtgtttaatctt 340  Q
    | ||||| |||| | ||  |||||||||||    
T  2966658 taaaaatataattatttgatgtttaatctt 2966687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 170 - 340
Target Start/End: Complemental strand, 28564460 - 28564292
Alignment:
Q  170 tgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatg 269  Q
    |||||||| |||||| |||| ||||||||| |||| | |||  |||||||||||||||||||  |||| |||||||||||||||||||||||||||||||    
T  28564460 tgaataaa-aataataattactattatttttatcattatcaaatatttaaaattaaataccgtaatttaaacactactaatgtgtgtgttctattttatg 28564362  T
Q  270 taggacccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    | | |||  |||  ||||||||||||  |||||| | ||||||||| | |||| | || ||||||||||||    
T  28564361 tggaacctccacactattttttcaatgtacacaacattagatcaaagtataat-atttggtgtttaatctt 28564292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 17021243 - 17021332
Alignment:
Q  227 taccgctattttaacactactaatgtgtgtgttctattttatgtagga-cccacactttattttttcaattcacacaatactagatcaaa 315  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| | |||||||||    
T  17021243 taccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccacactctattttttcaattcacacaacattagatcaaa 17021332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 227 - 315
Target Start/End: Original strand, 17551680 - 17551769
Alignment:
Q  227 taccgctattttaacactactaatgtgtgtgttctattttatgtagga-cccacactttattttttcaattcacacaatactagatcaaa 315  Q
    |||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||| | |||||||||    
T  17551680 taccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccacactctattttttcaattcacacaacattagatcaaa 17551769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 87 - 291
Target Start/End: Complemental strand, 24672567 - 24672364
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||| ||||||||||||| ||||||| ||||| | || ||| ||||| ||||||| ||| | |||| |||| ||||||| | ||||||| |||||| |    
T  24672567 aatgaatgaaagatagaaaactcagttgaattcttattcttatgacaaccaacataaactacatttataggaagtgatatccacgaataaa-aataatca 24672469  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggacccacactttat 286  Q
    | ||||||||||  |||| | | |  |||||| ||||||||| | | |||| ||||||| | || || ||| |||||||||| | |||||| |||| |||    
T  24672468 taattattatttctatcattattaagtatttacaattaaatatcacaatttaaacactattgatctgcgtgctctattttatttgggacccccactctat 24672369  T
Q  287 ttttt 291  Q
    |||||    
T  24672368 ttttt 24672364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 25 - 189
Target Start/End: Original strand, 28864080 - 28864245
Alignment:
Q  25 agtaacaaactaatcggataagttcaaaa-taaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattcagttggattctcaa 123  Q
    ||||||||||||||  ||||||||||||| |||||||| |||||| ||||| |        |||||||||||||||||  ||||||| ||| ||||||||    
T  28864080 agtaacaaactaattagataagttcaaaaataaacaaacccacaaaattagataaaacaaactaatgaaggaaagatatgaaattcaattgaattctcaa 28864179  T
Q  124 tcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataattatta 189  Q
    |  ||| ||||| || ||||  |||||||||  ||  |||||| |||||||||| |||||| ||||    
T  28864180 tattatcacaaccaatataaattaaaattataagacgtgatatatatgaataaaaaataataatta 28864245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 332 - 382
Target Start/End: Original strand, 4097304 - 4097354
Alignment:
Q  332 tttaatctttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    ||||||||| ||||||||||||||||||| ||||||||| |||||||||||    
T  4097304 tttaatcttccaaccttccaatttctttctatcttcacatcaatgttccaa 4097354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 17798085 - 17798126
Alignment:
Q  276 ccacactttattttttcaattcacacaatactagatcaaaat 317  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  17798085 ccacactatattttttcaattcacacaacactagatcaaaat 17798126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 15875034 - 15874991
Alignment:
Q  339 tttcaaccttccaatttctttccatcttcacaccaatgttccaa 382  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||    
T  15875034 tttcaaccttccaattgctttccatctttacaccaaagttccaa 15874991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 367
Target Start/End: Original strand, 28864664 - 28864701
Alignment:
Q  330 tgtttaatctttcaaccttccaatttctttccatcttc 367  Q
    ||||||||||||||||||| ||||||||||||| ||||    
T  28864664 tgtttaatctttcaaccttacaatttctttccaacttc 28864701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 31440201 - 31440254
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctatttt 266  Q
    |||||||||||||||| | | |||| |||||||||||||  |||||||||||||    
T  31440201 tatttaaaattaaatatcacaatttaaacactactaatgattgtgttctatttt 31440254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 23547782 - 23547703
Alignment:
Q  157 gaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattt 237  Q
    ||||||||||  ||||||||| || ||| |||| ||||||||| |||| | |||  |||||||||||||||||||| ||||    
T  23547782 gaaatgatattcatgaataaa-aacaataattactattatttttatcattatcaagtatttaaaattaaataccgcaattt 23547703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 179 - 344
Target Start/End: Original strand, 5003 - 5170
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cc 276  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||||||||||||| |||||||||||||||  |||  ||    
T  5003 aataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgagtgttctattttatgcgggacccc 5102  T
Q  277 cacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttcaa 344  Q
    |||||| |||||||||||||||||||| | ||||||||| | || |||||| ||||||||||||||||    
T  5103 cacactctattttttcaattcacacaacattagatcaaagtatattaacttggtgtttaatctttcaa 5170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 179 - 340
Target Start/End: Complemental strand, 443096 - 442934
Alignment:
Q  179 aataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga-ccc 277  Q
    |||||| |||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||| | |||||||||||||||||||||||||| ||| |||    
T  443096 aataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacccaactaatgtgtgtgttctattttatgtgggacccc 442997  T
Q  278 acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| |||||||||||||||||||| | ||||||||| | |||| | ||| |||||||||||    
T  442996 acactctattttttcaattcacacaacattagatcaaagtataattatttaatgtttaatctt 442934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 145 - 344
Target Start/End: Original strand, 36028 - 36227
Alignment:
Q  145 ctaaaattatgggaaatgatatctatgaataaagaataattattattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacact 244  Q
    ||||| ||||||||| ||||||  |  |||||| |||||| |||| ||||||||| |||| | |||  ||||||||||||||||||||  ||| ||||||    
T  36028 ctaaatttatgggaagtgatattcacaaataaa-aataataattactattatttttatcattatcaaatatttaaaattaaataccgcagtttaaacact 36126  T
Q  245 actaatgtgtgtgttctattttatgt-aggacccacactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaatctttca 343  Q
    ||||||| ||| ||||||||||||||  || |||||||| ||||||||||||||| |||| | ||||||||||| |||| | || |||||||||||||||    
T  36127 actaatgcgtgagttctattttatgtggggccccacactctattttttcaattcatacaacattagatcaaaatataattatttggtgtttaatctttca 36226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 8082 - 8211
Alignment:
Q  213 tatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtagga--cccacactttattttttcaattcacacaatactaga 310  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||| |||||| |||  |||||||| |||||||||||||||||||| | || |    
T  8082 tatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatcttatgtgggacccccacactctattttttcaattcacacaacattaaa 8181  T
Q  311 tcaaaatttaataacttagtgtttaatctt 340  Q
    ||||| | |||| |||| ||||||||||||    
T  8182 tcaaagtataattacttggtgtttaatctt 8211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 87 - 337
Target Start/End: Original strand, 6080 - 6331
Alignment:
Q  87 aatgaaggaaagatagaaaattcagttggattctcaatcatattacaacaaacataacctaaaattatgggaaatgatatctatgaataaagaataatta 186  Q
    |||||||||||||||  ||||| || || ||||| | || ||| |||||   ||||| ||||| ||||||||| ||||||  | ||||||| |||||| |    
T  6080 aatgaaggaaagataagaaatttaggtgaattcttattcttatcacaacctccataagctaaatttatgggaagtgatattcacgaataaa-aataataa 6178  T
Q  187 ttattattattttcatcaatgtcagttatttaaaattaaataccgctattttaacactactaatgtgtgtgttctattttatgtaggac--ccacacttt 284  Q
    ||| ||||||||| |||| | |||  |||||||||||||||||| | |||| ||||| |||||||||||| |||||| |||||| ||||  | ||||| |    
T  6179 ttactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacaccactaatgtgtgtattctatcttatgtgggacctcaacactct 6278  T
Q  285 attttttcaattcacacaatactagatcaaaatttaataacttagtgtttaat 337  Q
    |||||||||||||||| || | |||||| || | |||| |||| |||||||||    
T  6279 attttttcaattcacataacattagatcgaagtataattacttggtgtttaat 6331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 147730 - 147587
Alignment:
Q  11 cacagataagctcaagtaacaaactaatcggataagttcaaaat-aaacaaatccacaagattagctgnnnnnnnctaatgaaggaaagatagaaaattc 109  Q
    |||||||||||||||||||||||||||| ||| ||||||||||  |||||||  ||||||||||| ||       ||||||||||||| |||| ||||||    
T  147730 cacagataagctcaagtaacaaactaattggacaagttcaaaaagaaacaaacgcacaagattagatgaaacaaactaatgaaggaaaaataggaaattc 147631  T
Q  110 agttggattctcaatcatattacaacaaacataacctaaaatta 153  Q
    |||||||||||||||| ||| |||| || ||||| |||||||||    
T  147630 agttggattctcaatcttatcacaataagcataagctaaaatta 147587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 140 - 344
Target Start/End: Original strand, 4872 - 5075
Alignment:
Q  140 ataacctaaaattatgggaaatgatatctatgaataaagaataattattattattattttc-atcaatgtcagttatttaaaattaaataccgctatttt 238  Q
    |||| ||||| ||||||||| ||||||  | ||||||| |||||| |||| |||||||||  |||| | |||  |||||||||||||||||||| | ||     
T  4872 ataaactaaatttatgggaagtgatattcacgaataaa-aataataattactattattttttatcattatcaagtatttaaaattaaataccgcaactta 4970  T
Q  239 aacactactaatgtgtgtgttctattttatgtaggaccc-acactttattttttcaattcacacaatactagatcaaaatttaataacttagtgtttaat 337  Q
    ||||| |||||| |||||  | |||||||||| | |||| ||||| |||||||||||||||||||| | ||||||||| | |||| || | |||||||||    
T  4971 aacacaactaatatgtgt--tatattttatgtggtaccccacactatattttttcaattcacacaacattagatcaaagtataattacgtggtgtttaat 5068  T
Q  338 ctttcaa 344  Q
    |||||||    
T  5069 ctttcaa 5075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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