View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19193_low_71 (Length: 284)
Name: NF19193_low_71
Description: NF19193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19193_low_71 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 266
Target Start/End: Complemental strand, 16212448 - 16212183
Alignment:
| Q |
1 |
caaatacttcatttatgagaacaacgattattaatcttctttacgacttatgccatgatcaacctagacattattaagaaaaactcaaatctcacattga |
100 |
Q |
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||||||||||||||||||||| ||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16212448 |
caaatacttcatttatgagaataacaattattaatcttctataggacttatgccatgatcaacctagacattattaagaaaaactcaaatctcacattga |
16212349 |
T |
|
| Q |
101 |
aaagaggtaagatctaaaacgatttataaatagttactcatctgatcctacgaagccggttttacaacaatgagactaaattcaaaacctaattaacaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16212348 |
aaagaggtaagatctaaaacgatttataaatagttacgcatctcatcctacgaagccggttttacaacaatgagactaaattcaaaacctaattaacaag |
16212249 |
T |
|
| Q |
201 |
aaaacatccaaattcttacataaagtatatgctcctttgtcggactacaagcacatatttacaatg |
266 |
Q |
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||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |
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| T |
16212248 |
aaaacatccaaattcttacataatgtataagctcctttgtcggactacaagcacatatttacaatg |
16212183 |
T |
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