View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19193_low_76 (Length: 269)
Name: NF19193_low_76
Description: NF19193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19193_low_76 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 27154893 - 27155151
Alignment:
| Q |
1 |
catcctcgaaggattcgccacataaagcaatgcatgcaaaatcagggagttctcattcctctggccacacgcccggtgaaatagctgcttatgccattgc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27154893 |
catcctcgaaggattcgccacataaagcaatgcatgcaaaatcagggagttctcattcctctggccacacgcccggtgaaatagctgcttatgccattgc |
27154992 |
T |
|
| Q |
101 |
agcagttttggttgtcgccatagttgtggcagctg-nnnnnnngcgtttaggaagaagaaaacgaaaggggatgcatatgttggaccctatataccaccc |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27154993 |
cgcagttttggttgtcgccatagttgtggcagctgttttttttgcgtttaggaagaagaaaacgaaaggggatgcatatgttggaccctatataccaccc |
27155092 |
T |
|
| Q |
200 |
cctggtagcttccacattaaatcaggtaatgattttgtctcaattttatagttattcat |
258 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
27155093 |
cctggtagcttccacattaaatcaagtaatgattttgtctcaattttatagttattcat |
27155151 |
T |
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