View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19193_low_89 (Length: 242)
Name: NF19193_low_89
Description: NF19193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19193_low_89 |
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Alignment Details
Target: chr1 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 46736473 - 46736248
Alignment:
| Q |
1 |
attctgagcaagaatgaaagaaaagttgattataataaataggaaatttagaatgatgtatgaaacttaataaagtatttcaagagaaaatgtctatgga |
100 |
Q |
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| T |
46736473 |
attctgagcaagaatgaaagaaaagttgaatataataaataggaaatgtagaatgatgtatgaaacttaataaagtatttcaagagaaaacatctatgga |
46736374 |
T |
|
| Q |
101 |
tgaaaataatattaaaagatgacggcgttacagggagcactcttatgaatactttgatacttaataagagtaaatttagttaaaaatacttaatatttat |
200 |
Q |
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| T |
46736373 |
tgaaaataatattaaaagatgacggcgttacagggagcactcttatgaatactttgatacttaataagagtaaatttagttaaaaatacttaatatttat |
46736274 |
T |
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| Q |
201 |
ggtcatatgatgacagcctaaagagt |
226 |
Q |
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||||||||||||| |||||||||||| |
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| T |
46736273 |
ggtcatatgatgaaagcctaaagagt |
46736248 |
T |
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