View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19195_high_16 (Length: 264)

Name: NF19195_high_16
Description: NF19195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19195_high_16
NF19195_high_16
[»] chr5 (61 HSPs)
chr5 (14-183)||(40276207-40276379)
chr5 (9-145)||(31080480-31080617)
chr5 (9-152)||(37897891-37898035)
chr5 (14-149)||(27904661-27904798)
chr5 (14-151)||(36798167-36798306)
chr5 (14-148)||(3333879-3334015)
chr5 (14-151)||(35166294-35166431)
chr5 (153-242)||(27481080-27481169)
chr5 (167-264)||(40276514-40276617)
chr5 (153-241)||(11855914-11856002)
chr5 (14-149)||(25910720-25910859)
chr5 (153-240)||(6091440-6091527)
chr5 (153-240)||(12970789-12970876)
chr5 (153-240)||(18411934-18412021)
chr5 (149-240)||(28429453-28429544)
chr5 (149-240)||(29543270-29543361)
chr5 (14-81)||(2974702-2974769)
chr5 (14-150)||(12406218-12406356)
chr5 (149-239)||(19065760-19065850)
chr5 (14-83)||(19131678-19131747)
chr5 (153-240)||(555965-556052)
chr5 (149-240)||(1664456-1664547)
chr5 (153-240)||(4765819-4765906)
chr5 (153-240)||(8406619-8406706)
chr5 (153-240)||(22936171-22936258)
chr5 (149-240)||(26637276-26637367)
chr5 (14-148)||(32391897-32392033)
chr5 (9-145)||(24405493-24405630)
chr5 (153-240)||(28602281-28602368)
chr5 (153-240)||(36703507-36703594)
chr5 (20-83)||(9852853-9852916)
chr5 (36-150)||(36798376-36798492)
chr5 (57-149)||(12406040-12406134)
chr5 (34-149)||(35166491-35166608)
chr5 (37-145)||(8284158-8284266)
chr5 (153-240)||(14207080-14207167)
chr5 (14-152)||(18402982-18403122)
chr5 (14-82)||(26702504-26702571)
chr5 (14-82)||(26972237-26972304)
chr5 (149-240)||(27480736-27480827)
chr5 (153-240)||(32535662-32535749)
chr5 (14-69)||(3999276-3999331)
chr5 (153-239)||(8646649-8646735)
chr5 (92-150)||(19340762-19340821)
chr5 (18-146)||(20629926-20630057)
chr5 (16-63)||(26563075-26563122)
chr5 (20-82)||(16132812-16132874)
chr5 (14-147)||(39574240-39574371)
chr5 (91-148)||(25363825-25363882)
chr5 (14-82)||(20512264-20512332)
chr5 (24-147)||(32391720-32391845)
chr5 (149-189)||(43347149-43347189)
chr5 (98-148)||(40132904-40132955)
chr5 (210-240)||(17251539-17251569)
chr5 (15-69)||(19340943-19340997)
chr5 (16-82)||(28446072-28446138)
chr5 (14-72)||(34320125-34320183)
chr5 (91-151)||(3999083-3999144)
chr5 (92-149)||(15204287-15204344)
chr5 (24-83)||(6130321-6130381)
chr5 (92-147)||(43098281-43098337)
[»] chr1 (65 HSPs)
chr1 (14-151)||(3377498-3377637)
chr1 (14-147)||(16874681-16874816)
chr1 (9-149)||(45738935-45739076)
chr1 (14-151)||(17760679-17760820)
chr1 (149-240)||(46960354-46960445)
chr1 (153-240)||(52630499-52630586)
chr1 (14-148)||(32295131-32295267)
chr1 (9-83)||(39642381-39642455)
chr1 (153-240)||(9115563-9115650)
chr1 (153-240)||(25789489-25789576)
chr1 (153-240)||(47031585-47031672)
chr1 (149-240)||(48916277-48916368)
chr1 (14-150)||(7579661-7579800)
chr1 (153-240)||(1597601-1597688)
chr1 (153-240)||(5806535-5806622)
chr1 (153-240)||(46666434-46666521)
chr1 (149-224)||(52699720-52699795)
chr1 (154-240)||(6911211-6911297)
chr1 (154-240)||(32824647-32824733)
chr1 (14-125)||(50401395-50401506)
chr1 (153-239)||(51445338-51445424)
chr1 (19-152)||(8301528-8301662)
chr1 (14-79)||(41997819-41997884)
chr1 (149-240)||(1228134-1228225)
chr1 (161-240)||(20260353-20260432)
chr1 (153-240)||(25473981-25474068)
chr1 (149-240)||(29091398-29091489)
chr1 (161-240)||(32202580-32202659)
chr1 (153-240)||(36361509-36361596)
chr1 (153-240)||(38964938-38965025)
chr1 (153-240)||(50191023-50191110)
chr1 (154-240)||(39930183-39930269)
chr1 (149-240)||(45771818-45771909)
chr1 (14-125)||(44672339-44672448)
chr1 (95-152)||(51250481-51250539)
chr1 (14-146)||(1096469-1096603)
chr1 (153-237)||(5518762-5518846)
chr1 (149-236)||(13653581-13653669)
chr1 (153-240)||(2430223-2430310)
chr1 (92-147)||(5287831-5287887)
chr1 (153-240)||(8331740-8331827)
chr1 (153-240)||(12190436-12190523)
chr1 (91-150)||(50226390-50226450)
chr1 (154-240)||(9832130-9832216)
chr1 (24-157)||(3377699-3377834)
chr1 (24-149)||(12960845-12960972)
chr1 (22-148)||(14978797-14978924)
chr1 (149-241)||(13932127-13932219)
chr1 (18-83)||(15659173-15659238)
chr1 (14-83)||(23220633-23220702)
chr1 (14-83)||(50226569-50226638)
chr1 (14-66)||(14190720-14190772)
chr1 (153-240)||(14788449-14788536)
chr1 (149-240)||(24116589-24116680)
chr1 (14-145)||(12961023-12961155)
chr1 (24-83)||(32295019-32295078)
chr1 (149-239)||(38519315-38519405)
chr1 (162-240)||(52186265-52186343)
chr1 (163-240)||(2632579-2632656)
chr1 (9-83)||(30849403-30849477)
chr1 (14-83)||(46572893-46572960)
chr1 (209-239)||(49627301-49627331)
chr1 (149-240)||(19923718-19923809)
chr1 (97-152)||(43600397-43600453)
chr1 (149-189)||(47677421-47677461)
[»] chr4 (89 HSPs)
chr4 (14-149)||(44356576-44356711)
chr4 (14-149)||(53312285-53312423)
chr4 (14-152)||(12719623-12719764)
chr4 (14-159)||(25909476-25909623)
chr4 (14-150)||(2016789-2016927)
chr4 (9-149)||(14060876-14061018)
chr4 (15-125)||(20112329-20112439)
chr4 (14-149)||(2836898-2837035)
chr4 (14-148)||(10059875-10060013)
chr4 (16-148)||(14449464-14449599)
chr4 (14-83)||(6207352-6207421)
chr4 (153-240)||(41744480-41744567)
chr4 (149-240)||(45748050-45748141)
chr4 (14-151)||(51362533-51362675)
chr4 (149-240)||(55968255-55968346)
chr4 (15-149)||(1420723-1420859)
chr4 (14-145)||(27978695-27978827)
chr4 (149-240)||(30790277-30790367)
chr4 (14-149)||(8965694-8965825)
chr4 (149-238)||(38413907-38413996)
chr4 (149-240)||(10401035-10401126)
chr4 (153-240)||(13230248-13230335)
chr4 (34-146)||(21871585-21871696)
chr4 (34-146)||(21927446-21927557)
chr4 (153-240)||(39730552-39730639)
chr4 (153-240)||(39835566-39835653)
chr4 (153-240)||(40435629-40435716)
chr4 (153-240)||(41859305-41859392)
chr4 (153-240)||(43722993-43723080)
chr4 (153-240)||(47670091-47670178)
chr4 (36-144)||(14060760-14060868)
chr4 (14-72)||(43074766-43074824)
chr4 (14-83)||(2654147-2654216)
chr4 (14-83)||(14016792-14016861)
chr4 (14-83)||(21597580-21597649)
chr4 (153-240)||(8321974-8322061)
chr4 (153-240)||(23686516-23686603)
chr4 (18-150)||(23759756-23759889)
chr4 (153-240)||(25932170-25932257)
chr4 (153-240)||(27555156-27555243)
chr4 (153-240)||(45595997-45596084)
chr4 (153-236)||(48519150-48519233)
chr4 (149-240)||(51968508-51968599)
chr4 (14-145)||(6637241-6637373)
chr4 (14-145)||(47999533-47999665)
chr4 (153-235)||(50673163-50673245)
chr4 (153-238)||(42773679-42773764)
chr4 (57-146)||(1420537-1420627)
chr4 (96-152)||(19909169-19909226)
chr4 (14-83)||(31553420-31553489)
chr4 (160-240)||(48873750-48873830)
chr4 (160-240)||(48879054-48879134)
chr4 (92-151)||(21957536-21957596)
chr4 (153-240)||(27763158-27763245)
chr4 (153-240)||(31938128-31938215)
chr4 (102-145)||(2180780-2180823)
chr4 (149-240)||(38394636-38394727)
chr4 (17-145)||(50769366-50769496)
chr4 (24-154)||(23759555-23759686)
chr4 (154-235)||(34238214-34238295)
chr4 (14-125)||(53924929-53925040)
chr4 (14-71)||(11824267-11824323)
chr4 (149-240)||(18405132-18405222)
chr4 (14-150)||(21451457-21451593)
chr4 (92-147)||(35615315-35615371)
chr4 (91-154)||(53312541-53312605)
chr4 (154-240)||(6280181-6280267)
chr4 (155-240)||(7258693-7258778)
chr4 (14-69)||(21322889-21322944)
chr4 (101-147)||(21957733-21957780)
chr4 (149-199)||(34049852-34049903)
chr4 (20-82)||(1186872-1186934)
chr4 (101-149)||(2017054-2017103)
chr4 (150-235)||(12276166-12276250)
chr4 (14-83)||(16292335-16292404)
chr4 (22-83)||(20118089-20118150)
chr4 (41-82)||(29697590-29697631)
chr4 (153-237)||(32953255-32953339)
chr4 (15-68)||(34567795-34567848)
chr4 (96-148)||(43074827-43074880)
chr4 (9-82)||(55732636-55732709)
chr4 (92-151)||(1186655-1186715)
chr4 (177-240)||(18405516-18405579)
chr4 (149-240)||(36860012-36860102)
chr4 (91-150)||(37832953-37833013)
chr4 (14-54)||(49185665-49185705)
chr4 (101-148)||(52463053-52463101)
chr4 (15-83)||(52865447-52865515)
chr4 (98-149)||(54855303-54855355)
[»] chr3 (75 HSPs)
chr3 (14-149)||(51315662-51315799)
chr3 (14-149)||(14340912-14341047)
chr3 (15-152)||(38957841-38957981)
chr3 (14-145)||(44585964-44586097)
chr3 (14-83)||(44436576-44436645)
chr3 (149-240)||(6832177-6832268)
chr3 (14-149)||(44433242-44433381)
chr3 (153-241)||(43719184-43719272)
chr3 (14-148)||(54719175-54719309)
chr3 (153-240)||(10822976-10823063)
chr3 (153-240)||(11239379-11239466)
chr3 (153-240)||(26848747-26848834)
chr3 (149-240)||(28770464-28770555)
chr3 (153-240)||(33218172-33218259)
chr3 (153-240)||(48340016-48340103)
chr3 (35-146)||(22494555-22494667)
chr3 (153-240)||(8476567-8476654)
chr3 (149-240)||(31436177-31436268)
chr3 (16-148)||(38177178-38177310)
chr3 (153-240)||(40907991-40908078)
chr3 (153-240)||(43132415-43132502)
chr3 (35-147)||(50802660-50802773)
chr3 (35-147)||(50873104-50873217)
chr3 (149-239)||(6927817-6927907)
chr3 (154-240)||(24574292-24574378)
chr3 (153-239)||(47115116-47115202)
chr3 (14-83)||(27178325-27178394)
chr3 (14-83)||(33329795-33329864)
chr3 (153-240)||(1098924-1099011)
chr3 (153-240)||(20414724-20414811)
chr3 (149-240)||(24783934-24784025)
chr3 (161-240)||(29512325-29512404)
chr3 (153-240)||(44952033-44952120)
chr3 (36-150)||(25902553-25902669)
chr3 (149-239)||(31611240-31611330)
chr3 (154-240)||(46359677-46359763)
chr3 (14-148)||(3192774-3192909)
chr3 (14-147)||(54464163-54464298)
chr3 (153-237)||(28124695-28124779)
chr3 (14-83)||(43747458-43747527)
chr3 (14-150)||(3916429-3916565)
chr3 (149-240)||(27822996-27823087)
chr3 (14-115)||(28712489-28712590)
chr3 (149-236)||(38140623-38140710)
chr3 (153-240)||(53165983-53166070)
chr3 (154-240)||(6231761-6231847)
chr3 (21-72)||(25843443-25843494)
chr3 (149-240)||(26849400-26849491)
chr3 (9-71)||(578586-578648)
chr3 (14-148)||(20432362-20432497)
chr3 (36-149)||(25154381-25154496)
chr3 (155-236)||(32070999-32071080)
chr3 (16-70)||(36677691-36677745)
chr3 (14-147)||(1814735-1814866)
chr3 (36-149)||(3192982-3193096)
chr3 (149-240)||(12228509-12228600)
chr3 (149-189)||(49216076-49216116)
chr3 (92-149)||(14349365-14349423)
chr3 (92-149)||(28204479-28204537)
chr3 (91-148)||(33329611-33329669)
chr3 (16-70)||(36687771-36687825)
chr3 (14-83)||(44624690-44624759)
chr3 (16-82)||(46226765-46226831)
chr3 (14-83)||(1938383-1938452)
chr3 (20-69)||(7218335-7218384)
chr3 (14-71)||(8024960-8025017)
chr3 (164-240)||(9320719-9320795)
chr3 (57-150)||(28712683-28712777)
chr3 (14-83)||(48348437-48348505)
chr3 (14-79)||(49787321-49787386)
chr3 (18-70)||(86653-86705)
chr3 (207-239)||(2566492-2566524)
chr3 (153-240)||(20297518-20297605)
chr3 (24-72)||(28944106-28944154)
chr3 (102-145)||(36677783-36677827)
[»] chr6 (36 HSPs)
chr6 (20-149)||(10727378-10727509)
chr6 (14-149)||(33399785-33399920)
chr6 (14-150)||(30349347-30349484)
chr6 (20-152)||(6036844-6036976)
chr6 (149-237)||(6706007-6706095)
chr6 (153-241)||(14170739-14170827)
chr6 (14-83)||(26311582-26311651)
chr6 (19-149)||(2853598-2853731)
chr6 (24-150)||(12766403-12766530)
chr6 (148-233)||(12328075-12328158)
chr6 (153-240)||(1316744-1316831)
chr6 (153-240)||(10246375-10246462)
chr6 (149-240)||(14781865-14781955)
chr6 (153-240)||(16968650-16968737)
chr6 (16-144)||(20474885-20475014)
chr6 (153-240)||(2657425-2657512)
chr6 (153-240)||(18897646-18897733)
chr6 (14-82)||(26601528-26601596)
chr6 (14-82)||(32143326-32143394)
chr6 (24-82)||(6036712-6036770)
chr6 (9-82)||(1377275-1377348)
chr6 (9-82)||(1385023-1385096)
chr6 (92-152)||(2203407-2203468)
chr6 (161-240)||(8029028-8029107)
chr6 (154-240)||(7053838-7053924)
chr6 (91-149)||(30349612-30349671)
chr6 (14-83)||(17532318-17532387)
chr6 (149-237)||(21008234-21008322)
chr6 (100-145)||(32143261-32143306)
chr6 (33-149)||(3579594-3579711)
chr6 (91-148)||(17248636-17248694)
chr6 (92-152)||(8223987-8224048)
chr6 (152-240)||(9762298-9762386)
chr6 (14-70)||(3812820-3812875)
chr6 (18-82)||(4037106-4037170)
chr6 (20-52)||(24119706-24119738)
[»] chr2 (82 HSPs)
chr2 (14-152)||(14943723-14943861)
chr2 (14-151)||(43028791-43028929)
chr2 (9-149)||(5470510-5470650)
chr2 (153-240)||(37192247-37192334)
chr2 (14-148)||(39918434-39918570)
chr2 (153-246)||(37233149-37233242)
chr2 (14-150)||(34679095-34679233)
chr2 (149-240)||(13760692-13760783)
chr2 (153-240)||(17965708-17965795)
chr2 (14-82)||(44617917-44617985)
chr2 (14-145)||(2609267-2609399)
chr2 (14-149)||(25333498-25333634)
chr2 (155-240)||(5003096-5003181)
chr2 (14-149)||(6592723-6592862)
chr2 (149-241)||(3902181-3902273)
chr2 (14-83)||(37431610-37431679)
chr2 (153-240)||(346604-346691)
chr2 (153-240)||(4559284-4559371)
chr2 (153-240)||(6171516-6171603)
chr2 (153-240)||(28311955-28312042)
chr2 (149-240)||(40569743-40569834)
chr2 (31-150)||(21361879-21361999)
chr2 (153-238)||(9734105-9734190)
chr2 (31-149)||(14489407-14489525)
chr2 (17-83)||(16043203-16043269)
chr2 (21-83)||(34760914-34760976)
chr2 (14-151)||(14489211-14489349)
chr2 (14-83)||(32969624-32969693)
chr2 (153-237)||(40951118-40951202)
chr2 (153-240)||(2050591-2050678)
chr2 (153-240)||(11071330-11071417)
chr2 (153-240)||(14777757-14777844)
chr2 (149-240)||(18713911-18714002)
chr2 (149-240)||(20426737-20426828)
chr2 (153-240)||(37533678-37533765)
chr2 (149-240)||(39819415-39819506)
chr2 (153-240)||(41729389-41729476)
chr2 (149-239)||(1623078-1623167)
chr2 (149-239)||(3254347-3254437)
chr2 (154-240)||(5770370-5770456)
chr2 (15-82)||(8857114-8857181)
chr2 (149-231)||(11763655-11763737)
chr2 (14-68)||(5008466-5008520)
chr2 (36-149)||(31827524-31827639)
chr2 (149-241)||(14832535-14832627)
chr2 (9-82)||(25411609-25411682)
chr2 (24-153)||(31827721-31827850)
chr2 (155-239)||(45693915-45693999)
chr2 (149-240)||(7007310-7007401)
chr2 (36-151)||(16043086-16043203)
chr2 (149-240)||(23943888-23943979)
chr2 (153-240)||(42674920-42675007)
chr2 (154-240)||(638319-638405)
chr2 (149-235)||(13539399-13539485)
chr2 (91-149)||(25375129-25375188)
chr2 (16-83)||(27489499-27489566)
chr2 (24-150)||(43028981-43029109)
chr2 (153-235)||(45408981-45409063)
chr2 (154-239)||(21737668-21737753)
chr2 (14-72)||(24472625-24472683)
chr2 (101-149)||(19399441-19399490)
chr2 (14-83)||(35718712-35718781)
chr2 (100-149)||(41196491-41196540)
chr2 (31-83)||(25452-25504)
chr2 (36-148)||(15023039-15023152)
chr2 (91-150)||(21358361-21358421)
chr2 (92-148)||(24498106-24498162)
chr2 (24-83)||(39918629-39918689)
chr2 (24-83)||(5470394-5470453)
chr2 (23-114)||(6510186-6510278)
chr2 (161-239)||(26309993-26310071)
chr2 (153-235)||(27358221-27358303)
chr2 (24-149)||(19206141-19206267)
chr2 (149-237)||(13790018-13790106)
chr2 (101-149)||(36715560-36715609)
chr2 (14-83)||(37803190-37803258)
chr2 (149-189)||(4875552-4875592)
chr2 (23-83)||(4925506-4925566)
chr2 (166-237)||(14253254-14253325)
chr2 (91-146)||(18969354-18969410)
chr2 (15-47)||(20650693-20650725)
chr2 (19-83)||(36177045-36177109)
[»] chr8 (63 HSPs)
chr8 (33-149)||(20853377-20853493)
chr8 (14-83)||(37813269-37813338)
chr8 (9-149)||(30539164-30539305)
chr8 (14-148)||(45177201-45177337)
chr8 (153-240)||(7930964-7931051)
chr8 (153-240)||(35818683-35818770)
chr8 (149-240)||(37982042-37982133)
chr8 (14-145)||(37939917-37940046)
chr8 (153-238)||(10896475-10896560)
chr8 (22-146)||(26823828-26823954)
chr8 (14-149)||(32071193-32071326)
chr8 (16-152)||(39889953-39890091)
chr8 (153-240)||(16313766-16313853)
chr8 (153-240)||(18297837-18297924)
chr8 (153-240)||(25837636-25837723)
chr8 (153-240)||(26061869-26061956)
chr8 (153-240)||(37392805-37392892)
chr8 (153-240)||(38132997-38133084)
chr8 (149-240)||(43872220-43872311)
chr8 (14-148)||(6807347-6807480)
chr8 (14-152)||(29044725-29044863)
chr8 (91-148)||(36688253-36688311)
chr8 (161-240)||(12710370-12710449)
chr8 (149-236)||(15226695-15226782)
chr8 (153-240)||(18726879-18726966)
chr8 (153-240)||(26602196-26602283)
chr8 (153-240)||(38363806-38363893)
chr8 (154-240)||(32661194-32661280)
chr8 (9-71)||(14880414-14880476)
chr8 (92-145)||(25896993-25897047)
chr8 (14-83)||(3676306-3676375)
chr8 (153-241)||(5020750-5020838)
chr8 (9-150)||(23702308-23702450)
chr8 (14-83)||(41487388-41487457)
chr8 (149-240)||(3049734-3049825)
chr8 (57-149)||(6807172-6807264)
chr8 (24-83)||(25144130-25144190)
chr8 (149-240)||(25899384-25899475)
chr8 (149-240)||(31117781-31117872)
chr8 (15-83)||(41602549-41602617)
chr8 (153-240)||(42755592-42755679)
chr8 (20-83)||(16982795-16982857)
chr8 (154-200)||(35394155-35394202)
chr8 (92-149)||(45515932-45515990)
chr8 (149-240)||(19160996-19161087)
chr8 (14-83)||(21486721-21486790)
chr8 (24-114)||(27545544-27545634)
chr8 (36-146)||(29657702-29657817)
chr8 (92-152)||(35213027-35213088)
chr8 (149-240)||(16219196-16219287)
chr8 (36-152)||(17070903-17071020)
chr8 (36-152)||(17577252-17577369)
chr8 (91-150)||(44269373-44269433)
chr8 (91-149)||(28349563-28349622)
chr8 (91-147)||(15181640-15181697)
chr8 (92-149)||(27545343-27545401)
chr8 (151-240)||(33533649-33533738)
chr8 (207-240)||(12649860-12649893)
chr8 (92-149)||(34608635-34608692)
chr8 (18-67)||(44269301-44269350)
chr8 (16-68)||(25144024-25144076)
chr8 (149-189)||(33444877-33444917)
chr8 (91-150)||(37263356-37263416)
[»] chr7 (69 HSPs)
chr7 (14-149)||(41243643-41243778)
chr7 (14-151)||(36580453-36580591)
chr7 (14-152)||(28472386-28472523)
chr7 (14-146)||(47909696-47909829)
chr7 (14-149)||(15107170-15107304)
chr7 (18-148)||(15029058-15029193)
chr7 (149-240)||(9947246-9947337)
chr7 (153-240)||(11329718-11329805)
chr7 (14-145)||(18504246-18504379)
chr7 (153-239)||(37534361-37534447)
chr7 (14-145)||(18186629-18186763)
chr7 (18-151)||(28350113-28350248)
chr7 (153-240)||(28904445-28904532)
chr7 (153-240)||(35488448-35488535)
chr7 (16-83)||(3381929-3381995)
chr7 (14-150)||(15347952-15348086)
chr7 (154-240)||(27214115-27214201)
chr7 (153-239)||(27248019-27248105)
chr7 (154-240)||(33378559-33378645)
chr7 (154-240)||(34930727-34930813)
chr7 (14-149)||(35250118-35250254)
chr7 (14-149)||(20184915-20185053)
chr7 (14-149)||(28785933-28786072)
chr7 (153-238)||(44819981-44820066)
chr7 (153-237)||(18823890-18823974)
chr7 (149-240)||(6656725-6656817)
chr7 (149-240)||(17276414-17276505)
chr7 (153-240)||(25924896-25924983)
chr7 (149-240)||(27419479-27419570)
chr7 (153-240)||(43948970-43949057)
chr7 (153-240)||(45265307-45265394)
chr7 (153-240)||(48313847-48313934)
chr7 (153-239)||(30686250-30686336)
chr7 (154-240)||(48160833-48160919)
chr7 (18-149)||(14247487-14247615)
chr7 (14-67)||(8073957-8074010)
chr7 (14-71)||(36903341-36903398)
chr7 (91-149)||(42256581-42256641)
chr7 (24-151)||(4049909-4050038)
chr7 (153-240)||(44565770-44565857)
chr7 (9-125)||(17876197-17876310)
chr7 (14-144)||(21505796-21505927)
chr7 (149-239)||(31598449-31598539)
chr7 (153-239)||(45045352-45045438)
chr7 (154-240)||(48341089-48341174)
chr7 (57-145)||(6792017-6792107)
chr7 (24-150)||(15348145-15348274)
chr7 (91-151)||(19644800-19644858)
chr7 (153-237)||(39553910-39553994)
chr7 (24-125)||(5172711-5172815)
chr7 (19-83)||(6726438-6726501)
chr7 (15-83)||(9500080-9500148)
chr7 (35-151)||(14247291-14247408)
chr7 (24-151)||(20185104-20185232)
chr7 (149-236)||(22156433-22156520)
chr7 (149-236)||(22212348-22212435)
chr7 (92-152)||(35250374-35250434)
chr7 (101-148)||(36903533-36903581)
chr7 (165-240)||(45448667-45448742)
chr7 (101-148)||(12905792-12905839)
chr7 (91-145)||(20505101-20505156)
chr7 (14-114)||(28350323-28350421)
chr7 (15-82)||(29834330-29834397)
chr7 (161-238)||(38543920-38543998)
chr7 (92-149)||(3318317-3318375)
chr7 (14-83)||(11374146-11374214)
chr7 (153-237)||(25097796-25097881)
chr7 (14-82)||(1450320-1450388)
chr7 (153-189)||(40212665-40212701)
[»] scaffold0248 (1 HSPs)
scaffold0248 (14-145)||(405-539)
[»] scaffold0328 (1 HSPs)
scaffold0328 (14-145)||(9415-9547)
[»] scaffold0011 (1 HSPs)
scaffold0011 (14-125)||(145377-145489)
[»] scaffold0025 (2 HSPs)
scaffold0025 (14-83)||(19207-19276)
scaffold0025 (94-145)||(19600-19652)
[»] scaffold0015 (1 HSPs)
scaffold0015 (14-83)||(76929-76997)
[»] scaffold0006 (2 HSPs)
scaffold0006 (153-240)||(201651-201738)
scaffold0006 (149-236)||(143342-143430)
[»] scaffold0578 (1 HSPs)
scaffold0578 (14-68)||(3157-3211)
[»] scaffold0515 (1 HSPs)
scaffold0515 (91-149)||(3638-3697)
[»] scaffold0306 (1 HSPs)
scaffold0306 (91-149)||(3638-3697)
[»] scaffold0137 (1 HSPs)
scaffold0137 (18-152)||(19910-20045)
[»] scaffold0702 (1 HSPs)
scaffold0702 (153-240)||(3824-3911)
[»] scaffold0662 (1 HSPs)
scaffold0662 (153-240)||(4191-4278)
[»] scaffold0372 (1 HSPs)
scaffold0372 (14-150)||(122-258)
[»] scaffold0062 (1 HSPs)
scaffold0062 (14-82)||(46253-46321)
[»] scaffold1458 (1 HSPs)
scaffold1458 (91-149)||(1470-1529)
[»] scaffold0016 (1 HSPs)
scaffold0016 (19-71)||(203359-203411)


Alignment Details
Target: chr5 (Bit Score: 89; Significance: 6e-43; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 40276207 - 40276379
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn--cttagggggtcaaaatcgcaa 111  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||||||||||         |||||||||| ||||||||||    
T  40276207 agaccgggtcaaaattagccttgggggtcaaaattgccacatatgcaaaacttaggggacggttttgtagtttttttttcttagggggttaaaatcgcaa 40276306  T
Q  112 ctttgaaaaagttatgggg-taaaactgctattaagccttttctaaataccttggaataaatttctcatcttt 183  Q
     ||||  ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40276307 atttgggaaagttagggggataaaactgctattaagccttttctaaataacttggaataaatttctcatcttt 40276379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 31080617 - 31080480
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcg 108  Q
    |||| ||||||||| |||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||        ||||| |||||||||||    
T  31080617 agcatagaccgagttaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggtggttttgtagttttttttttaggaggtcaaaatcg 31080518  T
Q  109 caactttgaaaaagtta-tggggtaaaactgctattaa 145  Q
    |||||||| ||||||||  ||| |||||||| ||||||    
T  31080517 caactttggaaaagttagagggctaaaactgatattaa 31080480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 37897891 - 37898035
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatc 107  Q
    |||| |||||||||||||||| | ||||| |||||||| ||||||| ||||||||||||||||  ||||||||||        ||||||||| |||||||    
T  37897891 agcatagaccgagtcaaaattggtcttggaggccaaaactgccacatatgcaaaacttaggggc-ggttttgtagttttttttcttagggggccaaaatc 37897989  T
Q  108 gcaactttgaaaaagttatgggg-taaaactgctattaagcctttt 152  Q
    |||||||||||||||||| |||| |||||||||||||||| |||||    
T  37897990 gcaactttgaaaaagttagggggctaaaactgctattaaggctttt 37898035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 27904661 - 27904798
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| | |||||||| ||||| |||||||  |||||||||||||||| ||||||||||        |||| |||| ||||||||||||    
T  27904661 agaccgagtcaaaattggtcttgggggacaaaactgccacaagtgcaaaacttagggggcggttttgtagttttttttcttacggggccaaaatcgcaac 27904760  T
Q  113 tttgaaaaagtta-tggggtaaaactgctattaagcct 149  Q
    |||||||||||||  ||| |||||||||||||||||||    
T  27904761 tttgaaaaagttagagggctaaaactgctattaagcct 27904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 36798306 - 36798167
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaa 111  Q
    ||||||||||||| || | |||||||||||||| ||||||| ||||||||||||||||||||||||||||         ||||||||| |||||| ||||    
T  36798306 agaccgagtcaaa-ttggtcttgggggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaattgcaa 36798208  T
Q  112 ctttgaaaaagttatggg-gtaaaactgctattaagccttt 151  Q
    ||||| |||||||| |||  |||||||||||||||||||||    
T  36798207 ctttggaaaagttaagggtctaaaactgctattaagccttt 36798167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 3333879 - 3334015
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||||||||||||||  ||||||||||||||| ||||||| |||||||||||| || | ||||||||||        ||||||||| ||||||||||||    
T  3333879 agaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttatggagcggttttgtagtttttcttcttagggggccaaaatcgcaac 3333978  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    |||| |||||||| |||| ||||||| ||||||||||    
T  3333979 tttggaaaagttagggggctaaaactactattaagcc 3334015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 35166431 - 35166294
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||  | |||  ||||||||  ||||||  |||||||||||||||| | ||||||||       ||||||||||||||||||||| |    
T  35166431 agaccgagtcaaaattgacattgaaggccaaaaccgccacatgtgcaaaacttagggggcgattttgtagtttttttcttagggggtcaaaatcgcaatt 35166332  T
Q  114 ttgaaaaagttatggggtaaaactgctattaagccttt 151  Q
    ||| ||||||||  || |||||||||||||||||||||    
T  35166331 ttggaaaagttaaaggctaaaactgctattaagccttt 35166294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 27481169 - 27481080
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacacag 242  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||||    
T  27481169 ctaaattccttggaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacacag 27481080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 167 - 264
Target Start/End: Original strand, 40276514 - 40276617
Alignment:
Q  167 ataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac-------agtgatatttatagtagta 259  Q
    |||||||| |||||||||||||||||||||| |||||||||  ||||||||| ||||| |||||||||||||||       |||||||||||||||||||    
T  40276514 ataaatttatcatctttatattcaaggaatg-ttattaccaagaataaatttagtaaacttgaaacaaacacaccgagggtagtgatatttatagtagta 40276612  T
Q  260 gaatt 264  Q
    |||||    
T  40276613 gaatt 40276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 11855914 - 11856002
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 241  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| ||||||||||||||||    
T  11855914 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacaca 11856002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 25910859 - 25910720
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag----nnnnnnncttagggggtcaaaatcgc 109  Q
    ||||||||||||||||  ||||||||||||||| |||||||  ||||||| |||| ||||||||||||||           ||||||||| ||||||| |    
T  25910859 agaccgagtcaaaattgaccttgggggccaaaactgccacaggtgcaaaatttagagggtggttttgtagtttttgtttttcttagggggccaaaatcac 25910760  T
Q  110 aactttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    |||||| | ||||||| |||||||||||| ||||||||||    
T  25910759 aactttaagaaagttagggggtaaaactgttattaagcct 25910720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 6091527 - 6091440
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  6091527 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 6091440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 12970789 - 12970876
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  12970789 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctagaaataaatttgataaacttgaaacaaacacac 12970876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 18412021 - 18411934
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  18412021 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 18411934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 28429544 - 28429453
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||| ||||||| |||||||||| ||| |||||||||||| ||||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  28429544 ttttttaaatactttggaataaaattcacatctttatatttcaaggaatgtt-atttctagaaataaatttggtaaacttgaaacaaacacac 28429453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 29543270 - 29543361
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  29543270 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 29543361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 81
Target Start/End: Complemental strand, 2974769 - 2974702
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgt 81  Q
    |||||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  2974769 agaccgagtcaaaattggcattgggggccaaaactgccacagatgcaaaacttagggggcggttttgt 2974702  T

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Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 150
Target Start/End: Original strand, 12406218 - 12406356
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaa 111  Q
    |||| ||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||| |||||||| |         |||| |||| ||||||| |||    
T  12406218 agactgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttagggggcggttttgttgtttttttttctta-ggggccaaaatctcaa 12406316  T
Q  112 ctttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    |||||||||||||| |||| ||||| ||||||||||||||    
T  12406317 ctttgaaaaagttagggggctaaaattgctattaagcctt 12406356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 19065760 - 19065850
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| ||||||||||||||    
T  19065760 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacaca 19065850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 19131678 - 19131747
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| ||||| |||||||||| || |||| ||||||||||||||||| ||||||||||    
T  19131678 agaccgagtcaaaattggccttcggggccaaaactgtcacagatgcaaaacttagggggcggttttgtag 19131747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 555965 - 556052
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  555965 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 556052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 1664547 - 1664456
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||||||| |||||| |||||||||||||| |||||| |||  |||||  ||| ||||||||||||||| |||||||||||||||    
T  1664547 ttttctaaataccttgaaataaaattctcatctttatatttcaagaaat-attattctcaggaataaatttggtaaacttgaaacaaacacac 1664456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 4765819 - 4765906
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||| ||||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  4765819 ctaaattccttagaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 4765906  T

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Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 8406706 - 8406619
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | ||||||||||||| |||| |||||||||||||||    
T  8406706 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttgataaacttgaaacaaacacac 8406619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 22936171 - 22936258
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  22936171 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 22936258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 26637276 - 26637367
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||| ||||||||    
T  26637276 ttttctaaataccttggaataaaattcccatctttatattccaaggaatg-ttattcctaaaaataaatttgataaacttgaaataaacacac 26637367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 32391897 - 32392033
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| | |||||  | ||||| || ||||||||||||||||| |||| ||||||||||        |||||||||  |||||||||||    
T  32391897 agaccgagtcaaaattggtcttggatgtcaaaactgtcacacatgcaaaacttaaggggcggttttgtagttttttttcttagggggctaaaatcgcaac 32391996  T
Q  113 tttgaaaaagttatgg-ggtaaaactgctattaagcc 148  Q
    ||||||||||||| || | |||||| |||||||||||    
T  32391997 tttgaaaaagttagggagttaaaacagctattaagcc 32392033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 24405630 - 24405493
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatc 107  Q
    |||| |||||||||||||||| ||| ||||| |||||| ||||| | |||||||||||||  || ||||||||||        || |||| |||||||||    
T  24405630 agcatagaccgagtcaaaattggccatgggg-ccaaaactgccaaagatgcaaaacttagttggcggttttgtagttttttttctcagggagtcaaaatc 24405532  T
Q  108 gcaactttgaaaaagttatggg-gtaaaactgctattaa 145  Q
    |||||||||||||||||| |||  |||||||||||||||    
T  24405531 gcaactttgaaaaagttaggggactaaaactgctattaa 24405493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 28602368 - 28602281
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||  |||||||||||| |||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  28602368 ctaaattccttggaataaaattcctatctttatattccaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 28602281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 36703594 - 36703507
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| ||||| |||||| |||||||||||| |||| |||||||||| ||| | |  |||||||||||||||||||||||||||||||    
T  36703594 ctaaattccttgaaataaaattctcatctttaaattccaaggaatgtt-attcctatgaataaatttggtaaatttgaaacaaacacac 36703507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 9852916 - 9852853
Alignment:
Q  20 agtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||| |||||||| ||||||| ||||||| ||||||||||||||||| | ||||||||    
T  9852916 agtcaaaattggccttgggagccaaaactgccacagatgcaaaacttagggggcgattttgtag 9852853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 36798376 - 36798492
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taa 133  Q
    ||||||||||| ||| |||  |||||||||||||||| ||||||| ||        ||||||||  ||||||||||||||||| ||||||| |||| |||    
T  36798376 gggggccaaaactgctacagttgcaaaacttagggggcggttttgcagttttttttcttaggggaccaaaatcgcaactttgagaaagttagggggctaa 36798475  T
Q  134 aactgctattaagcctt 150  Q
    |||||||||||||||||    
T  36798476 aactgctattaagcctt 36798492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 12406134 - 12406040
Alignment:
Q  57 tgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    |||||||||||||||| ||||||||||        ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||    
T  12406134 tgcaaaacttagggggcggttttgtagttttctttcttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 12406040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 149
Target Start/End: Original strand, 35166491 - 35166608
Alignment:
Q  34 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg--t 131  Q
    ||||||||||||| ||| |||  |||||||||||||||||| ||||||||       ||||||||  |||||||||||||| |  ||||||| ||||       
T  35166491 ttgggggccaaaactgctacagctgcaaaacttagggggtgattttgtagtttttttcttaggggaccaaaatcgcaacttcgtgaaagttaggggggcg 35166590  T
Q  132 aaaactgctattaagcct 149  Q
    ||||||||||||||||||    
T  35166591 aaaactgctattaagcct 35166608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 8284266 - 8284158
Alignment:
Q  37 ggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaa 135  Q
    |||| ||||| ||||||| |||||||||||||| |||||| ||||||        ||||| || |||||||||||||||| ||||||||||||| |||||    
T  8284266 gggggcaaaactgccacagatgcaaaacttaggaggtggtattgtagttttttt-ttaggaggccaaaatcgcaactttggaaaagttatggggttaaaa 8284168  T
Q  136 ctgctattaa 145  Q
     |||||||||    
T  8284167 ttgctattaa 8284158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 14207080 - 14207167
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| ||||| |||||| |||||||||||||||| ||| ||||| ||||| | || ||||||||| ||||| |||||||||||||||    
T  14207080 ctaaattccttgaaataaaattctcatctttatattccaatgaatg-ttattcctaggaataaattttgtaaacttgaaacaaacacac 14207167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 18403122 - 18402982
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaa 111  Q
    |||| ||||||||||| | |||||||| ||||| ||||| | ||||||||||||||| ||| ||||||||         ||||| ||| ||||||  |||    
T  18403122 agactgagtcaaaattggtcttgggggtcaaaactgccagagatgcaaaacttagggagtgattttgtagtttttttttcttagagggccaaaattacaa 18403023  T
Q  112 ctttgaaaaagttatggggtaaaactgctattaagcctttt 152  Q
    |||||||||| ||| ||| ||||||| ||||||| ||||||    
T  18403022 ctttgaaaaaattaggggttaaaactactattaaacctttt 18402982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 26702571 - 26702504
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    ||||||| |||||||| | |||||||||||||| ||||||| ||||||||||| ||||| |||||||||    
T  26702571 agaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcggttttgta 26702504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 26972304 - 26972237
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    ||||||| |||||||| | |||||||||||||| ||||||| ||||||||||| ||||| |||||||||    
T  26972304 agaccgaatcaaaattggtcttgggggccaaaactgccacaaatgcaaaactt-gggggcggttttgta 26972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 27480827 - 27480736
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||||||| |||||| |||||||||||||| |||||| |||  ||||| | | |||||||||||||||| || ||| ||||||||    
T  27480827 ttttctaaataccttgaaataaaattctcatctttatatttcaagaaat-attattcctaaaaataaatttggtaaacttaaaataaacacac 27480736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 32535749 - 32535662
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| ||||||| |||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  32535749 ctaaattccttggattaaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 32535662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 3999276 - 3999331
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagg 69  Q
    ||||| |||||||||| |||||||||||||||| ||||||| ||| ||||||||||    
T  3999276 agaccaagtcaaaattggccttgggggccaaaactgccacatatgtaaaacttagg 3999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 8646649 - 8646735
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||| |||||||||||| |||  |||||||||||| |||||||||| ||| | || ||||||||| ||||| ||||||||||||||    
T  8646649 ctaaattccttggaataaaattcctatctttatattccaaggaatgtt-attcctaggaataaatttagtaaacttgaaacaaacaca 8646735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 19340821 - 19340762
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    |||||||||||||||||||| |||| |||||||| |||| ||||||||||||||| ||||    
T  19340821 ttagggggtcaaaatcgcaattttggaaaagttagggggctaaaactgctattaaacctt 19340762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 20629926 - 20630057
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttg 116  Q
    |||||||||||| | | ||| |||||||| | ||||| ||||||||||||||||| ||||||||||        |||| |||| ||||||| ||||||||    
T  20629926 cgagtcaaaattggtcctggaggccaaaacttccacaaatgcaaaacttagggggcggttttgtagttttttttcttaaggggccaaaatcacaactttg 20630025  T
Q  117 aaaaagttatg--gggtaaaactgctattaag 146  Q
     |||||||| |  || ||||||||||||||||    
T  20630026 gaaaagttagggaggctaaaactgctattaag 20630057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 26563122 - 26563075
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaa 63  Q
    ||||||||||||||  ||||||||||||||||||||||| ||||||||    
T  26563122 accgagtcaaaattgaccttgggggccaaaattgccacagatgcaaaa 26563075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 16132874 - 16132812
Alignment:
Q  20 agtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||||||| ||||||||| |||||| ||||| |  |||||||||||||||| |||||||||    
T  16132874 agtcaaaattggccttggggaccaaaactgccataggtgcaaaacttagggggcggttttgta 16132812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 39574371 - 39574240
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||| || | |||||||||||||| |||||||  |||||||||||||||||| |||| |||       ||||||| | |||||||||||||    
T  39574371 agaccgagtcaaa-ttggtcttgggggccaaaactgccaca--tgcaaaacttagggggtgattttatagtttttttcttagggagccaaaatcgcaact 39574275  T
Q  114 ttgaaaaagtta-tggggtaaaactgctattaagc 147  Q
    | |  |||||||  |||  ||||||||||||||||    
T  39574274 tcgtgaaagttagagggcgaaaactgctattaagc 39574240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 25363882 - 25363825
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcc 148  Q
    |||||| || ||||||| ||||||| ||||||||| ||| ||||||||||||||||||    
T  25363882 cttaggaggccaaaatcacaactttaaaaaagttaggggctaaaactgctattaagcc 25363825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 20512332 - 20512264
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||||||||||||| | |||||||| ||||| | |||||  ||||||||||||||||  ||||||||    
T  20512332 agaccgagtcaaaattggtcttgggggtcaaaactaccacaggtgcaaaacttagggggcagttttgta 20512264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 147
Target Start/End: Complemental strand, 32391845 - 32391720
Alignment:
Q  24 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 122  Q
    |||||| |||||||||| |||||| ||| |||  |||||||||||||||||| ||||||||       |||| |||| ||||||| |||||| |  ||||    
T  32391845 aaaattggccttggggggccaaaactgctacagttgcaaaacttagggggtgattttgtagtttttttcttaaggggccaaaatcacaacttcgtgaaag 32391746  T
Q  123 ttatgggg-taaaactgctattaagc 147  Q
    ||| ||||  ||||||||||||||||    
T  32391745 ttaaggggcgaaaactgctattaagc 32391720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 43347149 - 43347189
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc 189  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  43347149 ttttctaaataccttagaataaacttctcatctttatattc 43347189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 40132955 - 40132904
Alignment:
Q  98 ggtcaaaatcgcaactttgaaaaagtta-tggggtaaaactgctattaagcc 148  Q
    ||||||||||||||||||||||||||||  ||  ||||||||||||||||||    
T  40132955 ggtcaaaatcgcaactttgaaaaagttagaggactaaaactgctattaagcc 40132904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 240
Target Start/End: Complemental strand, 17251569 - 17251539
Alignment:
Q  210 aataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||||||||||||||||||||||    
T  17251569 aataaatttggtaaatttgaaacaaacacac 17251539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 69
Target Start/End: Original strand, 19340943 - 19340997
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagg 69  Q
    ||||||||||||||| || |||||| | |||| ||||||| ||||||||||||||    
T  19340943 gaccgagtcaaaattggctttggggactaaaactgccacagatgcaaaacttagg 19340997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 28446138 - 28446072
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||||||||||| ||||| |||||||||  || |||| |||||||||||| ||| | ||||||||    
T  28446138 accgagtcaaaattggccttaggggccaaagctgtcacaaatgcaaaacttaagggatagttttgta 28446072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 34320125 - 34320183
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 72  Q
    ||||| ||||||||||  | ||||||||||||| ||||||| ||| |||||||||||||    
T  34320125 agaccaagtcaaaattgactttgggggccaaaactgccacaaatgtaaaacttaggggg 34320183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 3999144 - 3999083
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagccttt 151  Q
    |||||||||||||||||||||||| |  ||||||| ||||  |||||||||||||| |||||    
T  3999144 cttagggggtcaaaatcgcaacttcgtgaaagttagggggcgaaaactgctattaaaccttt 3999083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 15204287 - 15204344
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    |||||||||||||||||||||||| | ||||||| |||  |||| ||| |||||||||    
T  15204287 ttagggggtcaaaatcgcaacttttagaaagttaggggtcaaaagtgcaattaagcct 15204344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 6130381 - 6130321
Alignment:
Q  24 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||| |||||||||| |||||| ||| |||  ||||||||||||||| |||||||||||    
T  6130381 aaaattggccttggggggccaaaactgctacagttgcaaaacttaggggatggttttgtag 6130321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 43098281 - 43098337
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatggg-gtaaaactgctattaagc 147  Q
    ||||||||  ||||||| |||||||||||||||| |||  |||||||||||||||||    
T  43098281 ttagggggcaaaaatcgtaactttgaaaaagttaggggactaaaactgctattaagc 43098337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 3377637 - 3377498
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||        ||||||||| ||||||||||||    
T  3377637 agaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaac 3377538  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagccttt 151  Q
    |||| |||||||| |||| |||||||||||||||||||||    
T  3377537 tttggaaaagttagggggctaaaactgctattaagccttt 3377498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 16874681 - 16874816
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggt-caaaatcgcaac 112  Q
    |||||||||||||||| |||||||| ||||||| ||||||| |||||||||||| |||| ||||||||||       ||||| |||| |||||| |||||    
T  16874681 agaccgagtcaaaattggccttgggagccaaaactgccacagatgcaaaacttatggggcggttttgtagtttttttcttagagggtccaaaattgcaac 16874780  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagc 147  Q
    ||||| ||||||| |||| |||||||||||||||||    
T  16874781 tttgagaaagttagggggttaaaactgctattaagc 16874816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 45739076 - 45738935
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcg 108  Q
    |||| ||||||||||||||||  | ||||||||||||| ||||| | |||||||||||| |||| ||||||||||       |||||||||||||||||     
T  45739076 agcatagaccgagtcaaaattgactttgggggccaaaactgccatagatgcaaaacttaaggggcggttttgtagttttttccttagggggtcaaaatca 45738977  T
Q  109 caactttgaaaaagttatgg-ggtaaaactgctattaagcct 149  Q
    ||||||||| ||||||| || | ||||| |||||||||||||    
T  45738976 caactttgagaaagttagggagttaaaattgctattaagcct 45738935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 17760820 - 17760679
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag---nnnnnnncttagggggtcaaaatcgca 110  Q
    ||||||||||||||||   ||||| |||||||| ||||||| ||||||||||||||||||||||||||||          ||||||||| ||||||||||    
T  17760820 agaccgagtcaaaattgatcttggtggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttttttcttagggggccaaaatcgca 17760721  T
Q  111 actttgaaaaagttatgggg-taaaactgctattaagccttt 151  Q
    |||||||  |||||| |||| |||| ||||||||||||||||    
T  17760720 actttgaggaagttagggggctaaagctgctattaagccttt 17760679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 46960445 - 46960354
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||| | || |||||||||| ||||||||||||||||||||    
T  46960445 ttttctaaatatcttggaataaatttctcatctttatattccaaagaatg-ttattcctaggaataaatttgataaatttgaaacaaacacac 46960354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 52630586 - 52630499
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  52630586 ctaaattccttggaataaaattctcatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 52630499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 32295131 - 32295267
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaac 112  Q
    ||||||||| |||||| || ||||||||||||| || |||| ||| |||||||||| ||||||||||||         ||||||||||||||||||||||    
T  32295131 agaccgagttaaaattggctttgggggccaaaactgtcacaaatgtaaaacttaggtggtggttttgtaattttttttcttagggggtcaaaatcgcaac 32295230  T
Q  113 tttgaaaaag-ttatggggtaaaactgctattaagcc 148  Q
    |||||||||| ||| ||| ||||||| ||||||||||    
T  32295231 tttgaaaaagtttaggggctaaaactcctattaagcc 32295267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 39642381 - 39642455
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||| |||||||||||||||| || ||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  39642381 agcatagaccgagtcaaaattggctttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtag 39642455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 9115650 - 9115563
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  9115650 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 9115563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 25789576 - 25789489
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  25789576 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctagaaataaatttgataaacttgaaacaaacacac 25789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 47031672 - 47031585
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  47031672 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 47031585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 48916277 - 48916368
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| | |  |||||||||| |||| |||||||||||||||    
T  48916277 ttttctaaataccttggaataaaattctcatctttatattctaaggaatg-ttattcctaagaataaatttgataaacttgaaacaaacacac 48916368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 7579800 - 7579661
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnnctta-gggggtcaaaatcgcaa 111  Q
    ||||||||||||||||||| |||||||| ||||||||||||  |||||||||||| ||| ||||||||||        |||| ||||| |||||||||||    
T  7579800 agaccgagtcaaaattagctttgggggcaaaaattgccacaagtgcaaaacttagcgggcggttttgtagttttttttcttaggggggccaaaatcgcaa 7579701  T
Q  112 ctttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    ||||   ||||||| |||| ||||||||||||||| ||||    
T  7579700 cttttggaaagttaaggggttaaaactgctattaaacctt 7579661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 1597601 - 1597688
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  1597601 ctaaattccttggaataaaattcccatctttatatttcaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 1597688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 5806535 - 5806622
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  5806535 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 5806622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 46666521 - 46666434
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||| ||||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  46666521 ctaaattccttagaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 46666434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 52699720 - 52699795
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaa 224  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| | || |||||||||||||||    
T  52699720 ttttctaaataccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaa 52699795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 6911297 - 6911211
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  6911297 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 6911211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 32824733 - 32824647
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||| |||||||||||||||||||||    
T  32824733 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttcgtaaatttgaaacaaacacac 32824647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 50401506 - 50401395
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| ||||||||| |||||| || |||| ||||||||||||||||| ||||||||||        ||||||||  |||||||||||     
T  50401506 agaccgagtcaaaattggccttgggg-ccaaaactgtcacaaatgcaaaacttagggggcggttttgtagttatatttcttaggggaccaaaatcgcaat 50401408  T
Q  113 tttgaaaaagtta 125  Q
    |||||||||||||    
T  50401407 tttgaaaaagtta 50401395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 51445338 - 51445424
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||| |||||||||||| ||||||||| ||||||| |||||||||| ||| | || ||||||||||||||| ||||||||||||||    
T  51445338 ctaaattccttggaataaaattctcatctatatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacaca 51445424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 8301528 - 8301662
Alignment:
Q  19 gagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttga 117  Q
    ||||||||||| | |||||||| ||||| ||||||| |||||||| |||||||  ||||||||||        ||||| |||||||||| | |||||||     
T  8301528 gagtcaaaattggtcttgggggtcaaaactgccacagatgcaaaatttaggggacggttttgtagtttttattcttagagggtcaaaattgaaactttgg 8301627  T
Q  118 aaaagttatggggtaaaactgctattaagcctttt 152  Q
    |||| ||| ||| ||||||||||||||| ||||||    
T  8301628 aaaaattaggggctaaaactgctattaaacctttt 8301662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 41997819 - 41997884
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggtttt 79  Q
    |||||||||||||||| ||||||| |||||||| ||||||| ||||||| |||||||| |||||||    
T  41997819 agaccgagtcaaaattggccttggaggccaaaactgccacagatgcaaagcttaggggttggtttt 41997884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 1228134 - 1228225
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| | |||||||||| |||||||||||||||| ||||||| | |||||   |||||||||||||||||| || ||||||||||||    
T  1228134 ttttctaaattctttggaataaaattctcatctttatattccaaggaa-ggttattcatagaaataaatttggtaaacttaaaacaaacacac 1228225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 20260353 - 20260432
Alignment:
Q  161 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  20260353 cttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 20260432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 25474068 - 25473981
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| | |||||||||| |||||||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  25474068 ctaaattctttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 25473981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 29091489 - 29091398
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||| |||||||||||||||||| ||| |||||||||| || |||||||| ||||| | |  ||||||||||||||| |||||||||||||||    
T  29091489 ttttataaataccttggaataaaattcccatctttatattttaaggaatg-ttattcctaagaataaatttggtaaacttgaaacaaacacac 29091398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Original strand, 32202580 - 32202659
Alignment:
Q  161 cttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||||||||||||    
T  32202580 cttggaataaaattctcatctttatattccaaggaatg-ttattcctaaaaataaatttgataaacttgaaacaaacacac 32202659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 36361596 - 36361509
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||| ||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  36361596 ctaaattccttggaataaaattcccatttttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 36361509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 38964938 - 38965025
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| || ||||||||||||    
T  38964938 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttaaaacaaacacac 38965025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 50191023 - 50191110
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| ||| | |||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  50191023 ctaaattcctcgaaataaaattctcatctttatattctaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 50191110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 39930269 - 39930183
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| ||||||||||||| || ||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  39930269 taaattccttggaataaaattcccatctttatattccaaagaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 39930183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 45771909 - 45771818
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||||| |||||| |||||| ||| | ||| | |||||    | ||||||||||||||| |||||||||||||||    
T  45771909 ttttctaaataccttggaataaaattctcacctttatgttccaagaaaggttattcatgggaataaatttggtaaacttgaaacaaacacac 45771818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 44672448 - 44672339
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||| ||||||||   |||||| ||||||| ||||||| ||||||||||||||||| |||||||||         |||||||||||||||| |||||    
T  44672448 agaccgaatcaaaattgatcttgggcgccaaaactgccacatatgcaaaacttagggggcggttttgta--atttttgttagggggtcaaaatcacaact 44672351  T
Q  114 ttgaaaaagtta 125  Q
    |||| |||||||    
T  44672350 ttgagaaagtta 44672339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 51250539 - 51250481
Alignment:
Q  95 gggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctttt 152  Q
    ||||| ||||||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  51250539 gggggccaaaatcgcaactttgaaaaagttagggggctaaaactgttattaagcctttt 51250481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 1096603 - 1096469
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttg-tagnnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||||||||||||||  || | |||||||||| ||||||| |||| |||||||| ||| ||||||| |||        |||||||  ||||||||||||    
T  1096603 agaccgagtcaaaattgaccctaggggccaaaactgccacagatgcgaaacttagagggcggttttgttagttttttttttaggggaccaaaatcgcaac 1096504  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaag 146  Q
    |||| |||||||| |||| |||||||| |||||||    
T  1096503 tttggaaaagttaaggggctaaaactgttattaag 1096469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 5518762 - 5518846
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||| ||||| | |  ||||||||||||||| || |||||||||    
T  5518762 ctaaataccttggaataaaattcccatctttatattccaaggaatg-ttattccaatgaataaatttggtaaacttcaaacaaaca 5518846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 13653669 - 13653581
Alignment:
Q  149 ttttctaaataccttggaataaat-ttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 236  Q
    ||||| |||||||||| ||||||  ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||    
T  13653669 ttttccaaataccttgaaataaaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaac 13653581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 2430310 - 2430223
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||| | ||||| | || ||||||||| ||||| |||||||||||||||    
T  2430310 ctaaattccttggaataaaattcccatctttatattccaaggaacg-ttattcctaggaataaatttagtaaacttgaaacaaacacac 2430223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 5287831 - 5287887
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagc 147  Q
    |||||||| ||||||||||||||||| ||||||| |||| |||||||||||||||||    
T  5287831 ttagggggccaaaatcgcaactttgagaaagttaaggggttaaaactgctattaagc 5287887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 8331827 - 8331740
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| | |||||||||| ||| ||||||||||||| |||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  8331827 ctaaattctttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 8331740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 12190436 - 12190523
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| |||||   || |||||||||| |||| |||||||||||||||    
T  12190436 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcttaggaataaatttgataaacttgaaacaaacacac 12190523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 50226450 - 50226390
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    ||||||||| ||||||||||||||||||||||||| |||| ||||||||  ||||||||||    
T  50226450 cttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgtaattaagcctt 50226390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 9832130 - 9832216
Alignment:
Q  154 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| |||||||||||| | ||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  9832130 taaattccttggaataaaattcccatctttatattccgaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 9832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 157
Target Start/End: Original strand, 3377699 - 3377834
Alignment:
Q  24 aaaattagccttgg-gggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 122  Q
    |||||| ||||||| ||||||||| ||| | |  |||||||||||||||  ||||||||||       | ||||||| ||||||| ||||||||  ||||    
T  3377699 aaaattggccttggagggccaaaactgctaaagttgcaaaacttaggggacggttttgtagtttttttcctagggggccaaaatcacaactttgggaaag 3377798  T
Q  123 ttatgggg-taaaactgctattaagccttttctaaa 157  Q
    ||| |||| |||||||||||||||||| || |||||    
T  3377799 ttagggggctaaaactgctattaagccattcctaaa 3377834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 12960972 - 12960845
Alignment:
Q  24 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 122  Q
    ||||||||||||||||| |||||| ||| | |  ||||||||||||| || ||||||||||        || || || ||||||||||||||||||||||    
T  12960972 aaaattagccttggggggccaaaactgctatagttgcaaaacttaggaggcggttttgtagttttttttttgggaggccaaaatcgcaactttgaaaaag 12960873  T
Q  123 tta-tggggtaaaactgctattaagcct 149  Q
    |||  ||| |||||||| ||||||||||    
T  12960872 ttagcgggctaaaactgttattaagcct 12960845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 14978924 - 14978797
Alignment:
Q  22 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaa 121  Q
    |||||||| ||||| |||||||||| | |||||  ||||||||||||||||  |||||||||        | | ||   |||||||||||||||| ||||    
T  14978924 tcaaaattggcctttggggccaaaactaccacaggtgcaaaacttagggggcagttttgtagtttttttttgaaggacccaaaatcgcaactttggaaaa 14978825  T
Q  122 gttatgggg-taaaactgctattaagcc 148  Q
    |||| |||| ||||||||||||||||||    
T  14978824 gttagggggctaaaactgctattaagcc 14978797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 13932127 - 13932219
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 241  Q
    |||||| ||||||||| |||||| ||  |||||||||||| ||| ||||||| ||| |  |||||||||||| |||| ||||||||||||||||    
T  13932127 ttttctgaataccttgaaataaagtttccatctttatatttcaatgaatgtt-attccttgaaataaatttgataaacttgaaacaaacacaca 13932219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 15659173 - 15659238
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||| | |||| |||||||||| |||||| ||||||||||| ||||| | ||||||||    
T  15659173 cgagtcaaaattggtcttgagggccaaaatcgccacatatgcaaaactttgggggcgattttgtag 15659238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 23220702 - 23220633
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||| |||||||| | ||||||||||||||  ||||||  ||||||||||| |||| ||||||||||    
T  23220702 agaccgaatcaaaattggtcttgggggccaaaaccgccacatgtgcaaaacttaaggggcggttttgtag 23220633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 50226569 - 50226638
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||| ||||||||| |||||||||| ||| |||  |||||||||||| ||| ||||| ||||    
T  50226569 agaccgagtcaatattagccttcggggccaaaactgctacaggtgcaaaacttagagggcggtttagtag 50226638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 14190720 - 14190772
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaactt 66  Q
    |||||||||||||||| || |||| |||||||| ||||||| |||||||||||    
T  14190720 agaccgagtcaaaattggcattggaggccaaaactgccacagatgcaaaactt 14190772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 14788536 - 14788449
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| ||||| |||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| || ||||||||||||    
T  14788536 ctaaattccttgaaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttaaaacaaacacac 14788449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 24116589 - 24116680
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||| |||||||| |||||| ||||||||||||||||| |||||||| |||||   |  |||||||||| |||| || ||||||||||||    
T  24116589 ttttctatataccttgaaataaaattctcatctttatattctaaggaatg-ttattcttaagaataaatttgttaaacttaaaacaaacacac 24116680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 12961023 - 12961155
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| ||||| || ||||||| |||||||  ||||||| |||||||    ||||||||       ||||||    |||||||||||||    
T  12961023 agaccgagtcaaaattggcctttggagccaaaactgccacagttgcaaaatttaggggacaattttgtagtttttttcttaggaaaccaaaatcgcaact 12961122  T
Q  114 ttgaaaaagttatg-gggtaaaactgctattaa 145  Q
    |||||||| ||| | || |||||||||||||||    
T  12961123 ttgaaaaaattaggaggctaaaactgctattaa 12961155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 32295078 - 32295019
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||| |||||| ||||||||| ||| |||  ||||||||||||| |||||||||||||    
T  32295078 aaaattggccttgtgggccaaaactgctacaattgcaaaacttaggaggtggttttgtag 32295019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 38519315 - 38519405
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||||||||| |||||||||| || |||| ||||| ||| ||  |||||| ||| | |  ||||||||||||||||||||||||||||||    
T  38519315 ttttctaaatacattggaataaaattttcatttttatgttccaaaaaatgtt-attcctacgaataaatttggtaaatttgaaacaaacaca 38519405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 52186265 - 52186343
Alignment:
Q  162 ttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| |||||||||||||||| ||||||||| ||||| |   |||||||||||||||| || ||||||| ||||    
T  52186265 ttggaataaaattctcatctttatattccaaggaatg-ttattccttaaaataaatttggtaaacttaaaacaaatacac 52186343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 2632656 - 2632579
Alignment:
Q  163 tggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||| ||| ||| ||||||||| |||||||||| ||| | |||||||||||| ||||| |||||||||| ||||    
T  2632656 tggaataaaattcccatatttatattctaaggaatgtt-attcctagaaataaatttagtaaacttgaaacaaatacac 2632579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 30849403 - 30849477
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||| ||||| ||| |||||| |||||| ||||||||| |  |||| ||||||||||||||||  ||||||||||    
T  30849403 agcatagaccaagttaaaattggccttgtgggccaaaactatcacagatgcaaaacttaggggacggttttgtag 30849477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 46572960 - 46572893
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||| |||||||||| ||||||||| |  ||| ||||||| ||||||||||||||||  ||||||||||    
T  46572960 agaccaagtcaaaattggccttggggcc--aaactgccacaaatgcaaaacttaggggacggttttgtag 46572893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 239
Target Start/End: Complemental strand, 49627331 - 49627301
Alignment:
Q  209 aaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||||||||||||||||||||||||||||    
T  49627331 aaataaatttggtaaatttgaaacaaacaca 49627301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 19923718 - 19923809
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||| ||| ||||||| ||||||||||||| ||| ||| |||| ||||| | | ||||||||||| | || || ||||||||||||    
T  19923718 ttttctaaatatcttagaataaaattctcatctttatgttctaagaaatg-ttatttctaaaaataaatttgatgaacttaaaacaaacacac 19923809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 152
Target Start/End: Original strand, 43600397 - 43600453
Alignment:
Q  97 gggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctttt 152  Q
    |||||||||||||||| || ||| ||||| || | ||||||||||||||||||||||    
T  43600397 gggtcaaaatcgcaaccttaaaatagttagggtgctaaaactgctattaagcctttt 43600453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 47677461 - 47677421
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc 189  Q
    |||| |||||| ||||||||||| |||||||||||||||||    
T  47677461 ttttttaaatatcttggaataaaattctcatctttatattc 47677421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 7e-30; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 44356576 - 44356711
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||| |||||||||| | |||||||||||||| ||||||| ||||||||||||||||| |||||||||        |||||| || |||||||||||||    
T  44356576 agaccaagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtaatttttttcttaggcggccaaaatcgcaact 44356675  T
Q  114 ttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    |||| ||||||| ||| |||||||||||||||||||    
T  44356676 ttgagaaagttaggggctaaaactgctattaagcct 44356711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 53312423 - 53312285
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaa 111  Q
    |||| ||||| ||||| |||||||||||||||| |||||||  ||||||| |||||||||||||||||||         ||||||||| |||||||||||    
T  53312423 agactgagtccaaattggccttgggggccaaaactgccacatgtgcaaaatttagggggtggttttgtagtttgtttttcttagggggccaaaatcgcaa 53312324  T
Q  112 ctttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    |||||||||||||| |||| ||||| |||||||||||||    
T  53312323 ctttgaaaaagttagggggctaaaaatgctattaagcct 53312285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 12719623 - 12719764
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaa 111  Q
    |||||||||||||||| | ||||| |||||||| ||||||| ||||||||||||||||||||||||||||         ||||||||| ||||||  |||    
T  12719623 agaccgagtcaaaattggtcttggaggccaaaactgccacagatgcaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatatcaa 12719722  T
Q  112 ctttgaaaaagttatgggg-taaaactgctattaagcctttt 152  Q
    |||||  ||||||| |||| ||||||||||||||||||||||    
T  12719723 ctttgggaaagttagggggttaaaactgctattaagcctttt 12719764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 25909623 - 25909476
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| ||||||||||||||||   |||||  |||||||||||||||| |||||| |||        ||||||||| ||||||| ||||    
T  25909623 agaccgagtcaaaattggccttgggggccaaaacctccacaagtgcaaaacttagggggcggttttatagttttttttcttagggggccaaaatcacaac 25909524  T
Q  113 tttgaaaaagttatggggt-aaaactgctattaagccttttctaaata 159  Q
    |||| |||||||| ||||| |||||||||||||||||| || ||||||    
T  25909523 tttggaaaagttagggggttaaaactgctattaagcctgttataaata 25909476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 2016927 - 2016789
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| |||||||||||||||| |||||||  ||||||||||||||||  |||||||||        ||| | ||| ||||||||||||    
T  2016927 agaccgagtcaaaattggccttgggggccaaaactgccacatgtgcaaaacttagggggcagttttgtagtcttttttctttgagggccaaaatcgcaac 2016828  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    |||| |||||||| |||| |||||||||||| |||||||    
T  2016827 tttggaaaagttagggggctaaaactgctatcaagcctt 2016789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 14060876 - 14061018
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatc 107  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||   |||||||||        ||||||| | |||||||    
T  14060876 agcatagaccgagtcaaaattagccttgggggccaaaactgccacagatgtaaaacttaggggacagttttgtagttttttttcttagggagccaaaatc 14060975  T
Q  108 gcaactttgaaaaagttatgg-ggtaaaactgctattaagcct 149  Q
    |||||||||||||| ||| || | |||| ||||||||||||||    
T  14060976 gcaactttgaaaaaattagggagttaaagctgctattaagcct 14061018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 20112329 - 20112439
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactt 114  Q
    ||||||||||||||| || ||||||||||||| ||||||| ||||||||||| ||||| ||||||||||       ||| ||||| ||||||||||||||    
T  20112329 gaccgagtcaaaattggctttgggggccaaaactgccacatatgcaaaactttgggggcggttttgtagtatttttctttgggggccaaaatcgcaactt 20112428  T
Q  115 tgaaaaagtta 125  Q
    || ||||||||    
T  20112429 tggaaaagtta 20112439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 2837035 - 2836898
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||| ||||||||||| |||||||||||||||| |  |||||||||||||||||||||| ||||||||||        ||| ||||| |||||||||| |    
T  2837035 agactgagtcaaaattggccttgggggccaaaactctcacacatgcaaaacttagggggcggttttgtagttttttttctttgggggccaaaatcgcagc 2836936  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    |||| |||||||| |||| |||||||| ||||||||||    
T  2836935 tttggaaaagttagggggttaaaactgttattaagcct 2836898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 10059875 - 10060013
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag---nnnnnnncttagggggtcaaaatcgca 110  Q
    |||||||||||||||| |||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||          |||| ||||  |||||||||    
T  10059875 agaccgagtcaaaattggccttgagggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttttttttcttaaggggcaaaaatcgca 10059974  T
Q  111 actttgaaaaagttatggg-gtaaaactgctattaagcc 148  Q
    ||||||||||| ||| |||  ||||||||||||||||||    
T  10059975 actttgaaaaaattaggggtctaaaactgctattaagcc 10060013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 14449464 - 14449599
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||||||||||||| | ||||||||||         |||| | || |||||||||||||    
T  14449464 accgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggagcggttttgtagttttttttccttaagaggccaaaatcgcaact 14449563  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    ||| |||||||| |||| ||||||| ||||||||||    
T  14449564 ttggaaaagttagggggctaaaactactattaagcc 14449599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 6207352 - 6207421
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||| ||||||||||  ||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  6207352 agaccaagtcaaaattgaccttgggggccaaaattgccacaaatgcaaaacttagggggcggttttgtag 6207421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 41744480 - 41744567
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||||||||||||||||| || ||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  41744480 ctaaattccttggaataaaattctcatctttatattccaatgaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 41744567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 45748050 - 45748141
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  45748050 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 45748141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 51362675 - 51362533
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag----nnnnnnncttagggggtcaaaatcgc 109  Q
    |||| ||||||||||| | |||||||||||||| ||||||| ||||||||||||||||| ||||||||||           ||||||||| |||||||||    
T  51362675 agactgagtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagttttttttcttcttagggggccaaaatcgc 51362576  T
Q  110 aactttgaaaaagttatgggg-taaaactgctattaagccttt 151  Q
    ||||||  |||||||| |||| ||||||| ||||||| |||||    
T  51362575 aactttagaaaagttagggggctaaaactactattaaaccttt 51362533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 55968255 - 55968346
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  55968255 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 55968346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 1420723 - 1420859
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||| |||||||||| || || ||||||| |||||||||||| |||| ||||||||||        ||||||||  |||||||| ||||    
T  1420723 gaccgagtcaaaattggccttgggggtcataactgccacaaatgcaaaacttatggggcggttttgtagttctttttcttaggggaccaaaatcgtaact 1420822  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    |||  ||||||| |||| |||||||||||||||||||    
T  1420823 ttgggaaagttaaggggctaaaactgctattaagcct 1420859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 27978827 - 27978695
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| |||||||||| ||||| ||||||| ||||||||||||   ||  ||||||||        |||||||||||||||||||||||    
T  27978827 agaccgagtcaaaattggccttgggggtcaaaactgccacaaatgcaaaacttatatggcagttttgtaatttttttcttagggggtcaaaatcgcaact 27978728  T
Q  114 ttgaaaaagtta-tggggtaaaactgctattaa 145  Q
    |||| |||||||  ||| | |||||||||||||    
T  27978727 ttgagaaagttagagggcttaaactgctattaa 27978695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 30790367 - 30790277
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||| ||||||| |||||||||||||||||||||||||||| | ||||| ||| | | ||||||||||||| |||| |||||||||||||||    
T  30790367 ttttttaaatactttggaataaatttctcatctttatattccaagaatg-ttactcctagaaataaatttgctaaacttgaaacaaacacac 30790277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 8965694 - 8965825
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||  | |||||| |||||| ||||||| ||||||||||||||||| |||||| |||       ||||  ||| |||||||||||||    
T  8965694 agaccgagtcaaaattgacattggggaccaaaactgccacagatgcaaaacttagggggcggttttatag--tttttctta--gggccaaaatcgcaact 8965789  T
Q  114 ttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    |||||||| ||| ||| ||||| |||||||||||||    
T  8965790 ttgaaaaaattaggggttaaaattgctattaagcct 8965825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 38413996 - 38413907
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 238  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||| ||||| | | || ||||||||||||| |||||||||||||    
T  38413996 ttttctaaataccttggaattaaattctcatctttatattccaaggaatg-ttatttctaaaattaaatttggtaaacttgaaacaaacac 38413907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 10401035 - 10401126
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||| ||| ||||||||||| ||||||| |||||| ||||| ||||||| ||| |||||||||||||||||||| || ||||||||||||    
T  10401035 ttttctatatatcttggaataaaattctcatttttatacttcaaagaatgtt-atttccagaaataaatttggtaaacttaaaacaaacacac 10401126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 13230248 - 13230335
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  13230248 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 13230335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 21871585 - 21871696
Alignment:
Q  34 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-ta 132  Q
    ||||||||||||| | ||| | |||||||||||||| || ||||||||||        |||||||||||||||||||||||||||||||||| |||| ||    
T  21871585 ttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt--ttagggggtcaaaatcgcaactttgaaaaagttagggggcta 21871682  T
Q  133 aaactgctattaag 146  Q
    ||| ||||||||||    
T  21871683 aaattgctattaag 21871696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 21927446 - 21927557
Alignment:
Q  34 ttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-ta 132  Q
    ||||||||||||| | ||| | |||||||||||||| || ||||||||||        |||||||||||||||||||||||||||||||||| |||| ||    
T  21927446 ttgggggccaaaactaccaaagatgcaaaacttaggaggcggttttgtagtttttt--ttagggggtcaaaatcgcaactttgaaaaagttagggggcta 21927543  T
Q  133 aaactgctattaag 146  Q
    ||| ||||||||||    
T  21927544 aaattgctattaag 21927557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 39730552 - 39730639
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  39730552 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 39730639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 39835566 - 39835653
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| |||   |||||||||||||||||| |||||||||||||||    
T  39835566 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcatagaaataaatttggtaaacttgaaacaaacacac 39835653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 40435716 - 40435629
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  40435716 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 40435629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 41859305 - 41859392
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| ||||| |||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  41859305 ctaaattccttgaaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 41859392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 43723080 - 43722993
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| | |||||||||| ||| ||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  43723080 ctaaattctttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 43722993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 47670178 - 47670091
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  47670178 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 47670091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 14060868 - 14060760
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaa 134  Q
    ||||||||||| ||| | |  |||||| ||||||||| ||||||||||       ||||||||||||||||||||||||||||||||||| |||| ||||    
T  14060868 gggggccaaaactgctatagttgcaaagcttagggggcggttttgtagtttttt-cttagggggtcaaaatcgcaactttgaaaaagttagggggttaaa 14060770  T
Q  135 actgctatta 144  Q
    ||||||||||    
T  14060769 actgctatta 14060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 43074766 - 43074824
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 72  Q
    |||| ||||||||||| |||||||||||||||| ||||||| |||||||||||||||||    
T  43074766 agactgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttaggggg 43074824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 2654147 - 2654216
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||| |||||||||| |||||||||| ||||| ||||||| |||||||||||||||||  |||||||||    
T  2654147 agaccaagtcaaaattggccttgggggtcaaaactgccacatatgcaaaacttagggggcagttttgtag 2654216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 14016861 - 14016792
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||| |||||||||||||||||| |||||||| ||||||| || ||||||||| |||| ||||||||||    
T  14016861 agaccaagtcaaaattagccttggaggccaaaactgccacaaatacaaaacttaaggggcggttttgtag 14016792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 21597580 - 21597649
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||||||  ||||||||||||| ||||||| |||||||| |||||||  ||||||||||    
T  21597580 agaccgagtcaaaattagttttgggggccaaaactgccacatatgcaaaatttaggggacggttttgtag 21597649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 8322061 - 8321974
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| ||||| |||||| ||||||||||||||||| || ||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  8322061 ctaaattccttgtaataaaattctcatctttatattccaaagaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 8321974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 23686603 - 23686516
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  23686603 ctaaattccttggaataaaattcccatctttatatttcaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 23686516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 23759756 - 23759889
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttga 117  Q
    |||||||||||| ||||||| |||||||| || |||| || |||||||||||||  ||||||||||       ||||||||  |||||||||||||||      
T  23759756 cgagtcaaaattggccttggaggccaaaactgtcacagatacaaaacttaggggacggttttgtagtttttttcttaggggaccaaaatcgcaactttat 23759855  T
Q  118 aaaagttatgggg-taaaactgctattaagcctt 150  Q
     ||||||| |||| ||||| || |||||||||||    
T  23759856 gaaagttaaggggttaaaattgttattaagcctt 23759889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 25932257 - 25932170
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||| ||||||||||| ||||| | || ||||||||||| ||| |||||||||||||||    
T  25932257 ctaaattccttggaataaaattcccatctttatatttcaaggaatg-ttattcctaggaataaatttgggaaacttgaaacaaacacac 25932170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 27555243 - 27555156
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||| ||||| |||||||||||||||    
T  27555243 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttagtaaacttgaaacaaacacac 27555156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 45596084 - 45595997
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  45596084 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 45595997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 48519150 - 48519233
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 236  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||    
T  48519150 ctaaattccttggaataaaattcacatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaac 48519233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 51968599 - 51968508
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||| ||||||||||||||| ||||||||||||  | | |||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  51968599 ttttctatataccttggaataaaattctcatctttacgtacgaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 51968508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 6637241 - 6637373
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| || ||| ||||||||| ||||| | |||||||||||| |||| | ||||||||       |||||||||  ||||||| ||||    
T  6637241 agaccgagtcaaaattggcattgtgggccaaaactgccagaaatgcaaaacttaaggggcgattttgtagtttttttcttagggggctaaaatcgaaact 6637340  T
Q  114 ttgaaaaagtt-atggggtaaaactgctattaa 145  Q
    |||||||| || | ||| ||||| |||||||||    
T  6637341 ttgaaaaaattaaagggctaaaagtgctattaa 6637373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 47999665 - 47999533
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaac 112  Q
    ||||||| |||||||| ||||| |||| ||||| ||||||| ||| |||||||| || | ||||||||||        |||||||||  |||||||||||    
T  47999665 agaccgaatcaaaattggccttaggggtcaaaactgccacagatgtaaaacttatggagcggttttgtagttttttttcttagggggcaaaaatcgcaac 47999566  T
Q  113 tttgaaaaagttatggggtaaaactgctattaa 145  Q
    ||||||||| ||| | | |||||||||||||||    
T  47999565 tttgaaaaaattaggagttaaaactgctattaa 47999533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 50673163 - 50673245
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 235  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||| ||||| | || |||||||||| |||| ||||||||||    
T  50673163 ctaaattccttggaataaaattctcatctttatatttcaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaa 50673245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 42773764 - 42773679
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 238  Q
    |||||| |||||||||||| ||| |||||||||| || |||||||||| ||| | || ||||||||||||||| |||||||||||||    
T  42773764 ctaaattccttggaataaaattcccatctttatactccaaggaatgtt-atttctaggaataaatttggtaaacttgaaacaaacac 42773679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 1420627 - 1420537
Alignment:
Q  57 tgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaag 146  Q
    |||||||||||||||| ||||||||||        ||||| || |||||||||||||||| |||||||| |||| ||||||||||||||||    
T  1420627 tgcaaaacttagggggcggttttgtagttttttttttaggaggccaaaatcgcaactttggaaaagttagggggctaaaactgctattaag 1420537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 19909226 - 19909169
Alignment:
Q  96 ggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctttt 152  Q
    |||| ||||||||||||||||| ||||||| |||| ||||||||||||||||||||||    
T  19909226 ggggccaaaatcgcaactttgagaaagttagggggttaaaactgctattaagcctttt 19909169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 31553420 - 31553489
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| |||||||||||||||| ||||| | ||| |||| |||||||| | ||||||||    
T  31553420 agaccgagtcaaaattggccttgggggccaaaactgccatagatgtaaaatttagggggcgattttgtag 31553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 48873830 - 48873750
Alignment:
Q  160 ccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||  ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  48873830 ccttggaataatattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 48873750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 48879134 - 48879054
Alignment:
Q  160 ccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||  ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  48879134 ccttggaataatattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 48879054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 21957596 - 21957536
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgg-ggtaaaactgctattaagccttt 151  Q
    |||||||||||||||||||||||||| ||||||| || | |||||||| ||||||||||||    
T  21957596 ttagggggtcaaaatcgcaactttgagaaagttagggagctaaaactgatattaagccttt 21957536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 27763158 - 27763245
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||  |||||||||||| |||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  27763158 ctaaattccttggaataaaattcctatctttatattccaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 27763245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 31938128 - 31938215
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||| || ||||||||| ||| ||||||||| ||||| | |  |||||||||| |||| |||||||||||||||    
T  31938128 ctaaataccttggaataaaattttcatctttaaattccaaggaatg-ttattcctatgaataaatttgataaacttgaaacaaacacac 31938215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Complemental strand, 2180823 - 2180780
Alignment:
Q  102 aaaatcgcaactttgaaaaagttatggggtaaaactgctattaa 145  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  2180823 aaaatcgcaactttgaaaaagttaagggttaaaactgctattaa 2180780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 38394727 - 38394636
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||||||| |||||| ||||||| ||||| ||| | |||   ||| |   |||||||||||||||||| |||||||||||||||    
T  38394727 ttttctaaataccttgaaataaaattctcatatttatgttctaagaaatattagtcttagaaataaatttggtaaacttgaaacaaacacac 38394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 50769496 - 50769366
Alignment:
Q  17 ccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn--cttagggggtcaaaatcgcaactt 114  Q
    |||||||||||||  |||| ||||| |||| ||||| | ||||||||||||||||  ||||||||||         ||||||||| ||||||||||||||    
T  50769496 ccgagtcaaaattgaccttaggggctaaaactgccatagatgcaaaacttaggggc-ggttttgtagtttttttttcttaggggggcaaaatcgcaactt 50769398  T
Q  115 tgaaaaagttatgggg-taaaactgctattaa 145  Q
    ||  ||||||| |||| |||||||||||||||    
T  50769397 tgggaaagttagggggataaaactgctattaa 50769366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 154
Target Start/End: Complemental strand, 23759686 - 23759555
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagt 123  Q
    |||||| |||||||||||||||| | | |||  ||||||| |||||||  ||||||||||       |||| |||| |||||||||||||||   |||||    
T  23759686 aaaattggccttgggggccaaaactactacagttgcaaaatttaggggacggttttgtagtttttttcttaaggggccaaaatcgcaactttatgaaagt 23759587  T
Q  124 tatgggg-taaaactgctattaagccttttct 154  Q
    || ||||  |||||| ||||||||||||||||    
T  23759586 tagggggcgaaaactactattaagccttttct 23759555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 34238214 - 34238295
Alignment:
Q  154 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 235  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | |  |||||||||| |||| ||||||||||    
T  34238214 taaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctatgaataaatttgataaacttgaaacaaa 34238295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 125
Target Start/End: Original strand, 53924929 - 53925040
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||  ||||| ||| ||||| || |||| ||||||||||||||||| | |||| |||       ||||||||  |||||||||||||    
T  53924929 agaccgagtcaaaattgaccttgagggtcaaaactgtcacaaatgcaaaacttagggggagattttatagtttttttcttaggggaccaaaatcgcaact 53925028  T
Q  114 ttgaaaaagtta 125  Q
    ||  ||||||||    
T  53925029 ttagaaaagtta 53925040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 11824323 - 11824267
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 71  Q
    |||| ||||||||||| ||||||||  |||||| ||||||||||||||||||||||||    
T  11824323 agactgagtcaaaattggccttggga-ccaaaactgccacacatgcaaaacttagggg 11824267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 18405222 - 18405132
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||| | ||| |||||||||| ||||||||||| ||||| | |  ||||||||||| ||| || ||||||||||||    
T  18405222 ttttctaaataccttggaataca-ttcccatctttatatttcaaggaatg-ttattcctaagaataaatttggcaaacttaaaacaaacacac 18405132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 21451593 - 21451457
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| |||||| || |||||| |||||||  ||||||| ||||| |  | ||||||||       || |||| |  ||||||||||||    
T  21451593 agaccgagtcaaaattcgccttgtgg-ccaaaactgccacaagtgcaaaatttaggagacgtttttgtagtttttatctcagggagcaaaaatcgcaact 21451495  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    |||| ||||||| | || ||||||||||||||||||||    
T  21451494 ttgagaaagttaggaggctaaaactgctattaagcctt 21451457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 147
Target Start/End: Complemental strand, 35615371 - 35615315
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagc 147  Q
    |||||||| |||||||||||||||  |||||||| |||| |||||||||||||||||    
T  35615371 ttagggggccaaaatcgcaactttagaaaagttagggggctaaaactgctattaagc 35615315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 154
Target Start/End: Original strand, 53312541 - 53312605
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatggggt-aaaactgctattaagccttttct 154  Q
    ||||| |||||||||||||||||| |  ||||||| ||||| ||||||| |||||||||||||||    
T  53312541 cttagtgggtcaaaatcgcaacttcgtgaaagttagggggtgaaaactgttattaagccttttct 53312605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 6280181 - 6280267
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| |||  || ||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  6280181 taaattccttggaataaaattcctatttttatattccaaggaatgtt-attcctatgaataaatttggtaaacttgaaacaaacacac 6280267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 240
Target Start/End: Complemental strand, 7258778 - 7258693
Alignment:
Q  155 aaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccaga-aataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||| ||| ||| ||||||||| |||||||||| ||| || || |||||||||| |||| |||||||||||||||    
T  7258778 aaataccttggaataaaattcccatatttatattccaaggaatgtt-att-cctgagaataaatttgataaacttgaaacaaacacac 7258693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 69
Target Start/End: Original strand, 21322889 - 21322944
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagg 69  Q
    |||||||||||||||| || ||||||| ||||| || |||| ||||||||||||||    
T  21322889 agaccgagtcaaaattggcattgggggtcaaaactgtcacatatgcaaaacttagg 21322944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 147
Target Start/End: Original strand, 21957733 - 21957780
Alignment:
Q  101 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagc 147  Q
    |||||||||||||||| |||||||| |||| |||||||||||||||||    
T  21957733 caaaatcgcaactttggaaaagttagggggctaaaactgctattaagc 21957780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 199
Target Start/End: Original strand, 34049852 - 34049903
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtt 199  Q
    |||||||||| |||||||||||| ||| |||||||||||| |||||||||||    
T  34049852 ttttctaaattccttggaataaaattcccatctttatattccaaggaatgtt 34049903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 1186872 - 1186934
Alignment:
Q  20 agtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||||| | |||||||||||||||||||||| | || ||| || |||||||| ||||||||    
T  1186872 agtcaaaagtggccttgggggccaaaattgccaaagatccaatacatagggggttgttttgta 1186934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 2017054 - 2017103
Alignment:
Q  101 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    |||||||||||||||   |||||||||||| |||||||||||||||||||    
T  2017054 caaaatcgcaactttaggaaagttatggggctaaaactgctattaagcct 2017103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 12276166 - 12276250
Alignment:
Q  150 tttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 235  Q
    ||||||||||  ||| |||||| ||| |||||||||||||||  |||| ||||| | | |||||||||| ||||| ||||||||||    
T  12276166 tttctaaatattttgaaataaaattcacatctttatattcaaaaaatg-ttattcctataaataaatttagtaaacttgaaacaaa 12276250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 16292404 - 16292335
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||||    |||||||||||| |||||||  |||||||||||| ||| | ||||||||    
T  16292404 agaccgagtcaaaattacatatgggggccaaaactgccacatgtgcaaaacttagagggcgattttgtag 16292335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 20118089 - 20118150
Alignment:
Q  22 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||| | |||||||||||||| || |||| |||||||||||  ||||| |||||||||    
T  20118089 tcaaaattggtcttgggggccaaaactggcacatatgcaaaacttcaggggttgttttgtag 20118150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 29697631 - 29697590
Alignment:
Q  41 ccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||| ||||||| ||||||||||||||||| |||||||||    
T  29697631 ccaaaactgccacagatgcaaaacttagggggcggttttgta 29697590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 32953339 - 32953255
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    |||||| |||||||||||| ||| |||||||||||| ||| ||||  ||||| | ||||||||||| | |||| ||||||||||||    
T  32953339 ctaaattccttggaataaaattcccatctttatattccaatgaat-attatttctagaaataaattagataaacttgaaacaaaca 32953255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 34567795 - 34567848
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttag 68  Q
    ||||||||| |||||  | ||||||||||||| ||||||| |||||||||||||    
T  34567795 gaccgagtcgaaattgacattgggggccaaaactgccacatatgcaaaacttag 34567848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 148
Target Start/End: Original strand, 43074827 - 43074880
Alignment:
Q  96 ggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    |||||||||||||||||||||  ||||||| |||| ||||| ||||||||||||    
T  43074827 ggggtcaaaatcgcaactttgggaaagttagggggctaaaattgctattaagcc 43074880  T

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Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 55732709 - 55732636
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||| ||||| |||||||||| |||||||||||||||| ||||| | || ||| || |||||||  ||||||||    
T  55732709 agcaaagaccaagtcaaaattggccttgggggccaaaactgccaaatatccaatacatagggggctgttttgta 55732636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 1186715 - 1186655
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagccttt 151  Q
    |||||||| ||||||||||||||| ||||||||| ||||  |||| ||| |||||||||||    
T  1186715 ttagggggccaaaatcgcaacttttaaaaagttagggggccaaaagtgcaattaagccttt 1186655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 18405516 - 18405579
Alignment:
Q  177 catctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  18405516 catctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 18405579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 36860012 - 36860102
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||| |||||||| |  ||||||| ||| ||||| ||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  36860012 ttttctatataccttgaataaaatttc-catttttatgttccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 36860102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 37832953 - 37833013
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaagcctt 150  Q
    |||||||| ||||||||||||||||   ||||||| | || ||||||||||||||||||||    
T  37832953 cttaggggttcaaaatcgcaactttaggaaagttaggaggctaaaactgctattaagcctt 37833013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 49185705 - 49185665
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccaca 54  Q
    ||||| |||||||||| |||||||||||||||| |||||||    
T  49185705 agaccaagtcaaaattggccttgggggccaaaactgccaca 49185665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 52463053 - 52463101
Alignment:
Q  101 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    ||||||||||||||||||||| ||| |||| |||||||| |||||||||    
T  52463053 caaaatcgcaactttgaaaaaattagggggctaaaactgttattaagcc 52463101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 52865515 - 52865447
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||| ||||  |||||||||| || ||||   ||||||||||||||| |||| |||||    
T  52865515 gaccgagtcaaaattggcctacggggccaaaactggcacatgggcaaaacttagggggcggttctgtag 52865447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 54855355 - 54855303
Alignment:
Q  98 ggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaagcct 149  Q
    ||||||||||||| |||||| ||||||| | || |||||||||||||||||||    
T  54855355 ggtcaaaatcgcagctttgagaaagttaggtggttaaaactgctattaagcct 54855303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 51315662 - 51315799
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| |||||||||||||||| |||||||  |||||||||||||||| ||||||||||        ||||||||| ||||||||||||    
T  51315662 agaccgagtcaaaattggccttgggggccaaaactgccacaggtgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaac 51315761  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||  ||||||| |||| |||||||||||||||||||    
T  51315762 tttgggaaagttagggggctaaaactgctattaagcct 51315799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 14340912 - 14341047
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||    ||||||||        ||||  ||||||||||||||||    
T  14340912 agaccgagtcaaaattagcgttgggggccaaaactgccacaaatgcaaaacttaggggactattttgtagttttttttttagatggtcaaaatcgcaact 14341011  T
Q  114 ttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    ||||||||||||   ||||||||| |||||||||||    
T  14341012 ttgaaaaagttagaaggtaaaactactattaagcct 14341047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 15 - 152
Target Start/End: Complemental strand, 38957981 - 38957841
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||         ||||  ||| ||||||||||||    
T  38957981 gaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagtttttttttcttaaagggccaaaatcgcaac 38957882  T
Q  113 tttgaaaaagttatg-gggtaaaactgctattaagcctttt 152  Q
    ||| ||||| ||| | || ||||||||||||||||||||||    
T  38957881 tttaaaaaaattaggaggctaaaactgctattaagcctttt 38957841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 44585964 - 44586097
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| ||| |||||||||||| ||||||| | ||||||||||||||| ||||||||||        ||||||||| ||||||||||||    
T  44585964 agaccgagtcaaaattggccgtgggggccaaaactgccacagaagcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaac 44586063  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaa 145  Q
    ||||  ||||||| |||| |||||||||||||||    
T  44586064 tttgggaaagttagggggctaaaactgctattaa 44586097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 44436576 - 44436645
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  44436576 agaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 44436645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 6832177 - 6832268
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||||| |||||||||||||||| |||| |||| |||||   || |||||||||||||||||||||||||||||||    
T  6832177 ttttctaaataccttggaataaaattctcatctttatattccaagtaatg-ttattcttaggaataaatttggtaaatttgaaacaaacacac 6832268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 44433242 - 44433381
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttaggg-ggtcaaaatcgca 110  Q
    |||||| ||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||         ||||||| || | ||||||||    
T  44433242 agaccgggtcaaaattggccttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtagtttttttttcttagggaggccgaaatcgca 44433341  T
Q  111 actttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||| || |||||||| |||| |||||||||||||||||||    
T  44433342 actgtggaaaagttagggggctaaaactgctattaagcct 44433381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 43719184 - 43719272
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 241  Q
    |||||| |||||||||||| |||||| |||||||||| |||||||||| ||| | |||||||||||||||||| ||||||||||||||||    
T  43719184 ctaaattccttggaataaaattctcaactttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacaca 43719272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 54719175 - 54719309
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| || ||||||||||||  ||  ||| ||||||||||||||||| ||||||||||       |||||| || |||||||||||||    
T  54719175 agaccgagtcaaaattggcattgggggccaaacctggtacatatgcaaaacttagggggcggttttgtag-ttttttcttaggaggccaaaatcgcaact 54719273  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    ||||| |||||| |||| ||||||||| ||||||||    
T  54719274 ttgaataagttagggggttaaaactgccattaagcc 54719309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 10822976 - 10823063
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  10822976 ctaaataccttggaataaaattctcatctttatattgtaaggaatg-ttattcctagaaataaatttgctaaacttgaaacaaacacac 10823063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 11239379 - 11239466
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  11239379 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 11239466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 26848834 - 26848747
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  26848834 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 26848747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 28770464 - 28770555
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||| ||||||||||||||| |||||||| |||| ||| |||||||||| ||| | || |||||||||||||||||||||||||||||||    
T  28770464 ttttctatataccttggaataaaattctcatcattatgttccaaggaatgtt-attcctaggaataaatttggtaaatttgaaacaaacacac 28770555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 33218172 - 33218259
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  33218172 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 33218259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 48340016 - 48340103
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  48340016 ctaaattccttggaataaaattctcatctttatattctaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 48340103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 22494667 - 22494555
Alignment:
Q  35 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taa 133  Q
    |||||||||||||||||||| |||||||| |||| ||| ||||||||||       |||||||||||||||||| ||||||| |||| ||| |||| |||    
T  22494667 tgggggccaaaattgccacaaatgcaaaatttagagggcggttttgtagtttttttcttagggggtcaaaatcgtaactttggaaaatttagggggttaa 22494568  T
Q  134 aactgctattaag 146  Q
    || ||||||||||    
T  22494567 aattgctattaag 22494555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 8476567 - 8476654
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||  ||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  8476567 ctaaattccttggaataaaatttccatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 8476654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 31436177 - 31436268
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||| ||||||||||||||| |||  |||||||||||| || ||||||| ||| |||| ||||||||||||||| |||||||||||||||    
T  31436177 ttttctatataccttggaataaaattcctatctttatattctaaagaatgtt-atttccaggaataaatttggtaaacttgaaacaaacacac 31436268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 38177310 - 38177178
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaacttt 115  Q
    |||||||||||||| |||||||||||||||| || |||| ||||||||||||   ||||||||||||        ||||||||| |||||||||||||||    
T  38177310 accgagtcaaaattggccttgggggccaaaaatgtcacatatgcaaaacttaaaaggtggttttgta-attttttcttagggggccaaaatcgcaacttt 38177212  T
Q  116 gaaaaagttatgggg-taaaactgctattaagcc 148  Q
    |  ||||||| |||| ||||| ||| ||||||||    
T  38177211 gggaaagttaaggggctaaaattgccattaagcc 38177178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 40908078 - 40907991
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  40908078 ctaaattccttggaataaaattcccatctttatatttcaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 40907991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 43132415 - 43132502
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||| ||||| | |  ||||||||| ||||| |||||||||||||||    
T  43132415 ctaaataccttggaataaaattctcatctttatattccaaggaatg-ttattcctaagaataaatttagtaaacttgaaacaaacacac 43132502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 50802773 - 50802660
Alignment:
Q  35 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaa 133  Q
    |||||| ||||| |||||||  ||||||||||||||||| |||||||||       ||||||||| ||||||| |||||||| |||||||| | || |||    
T  50802773 tgggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagaggttaa 50802674  T
Q  134 aactgctattaagc 147  Q
    ||||||||||||||    
T  50802673 aactgctattaagc 50802660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 147
Target Start/End: Original strand, 50873104 - 50873217
Alignment:
Q  35 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaa 133  Q
    |||||| ||||| |||||||  ||||||||||||||||| |||||||||       ||||||||| ||||||| |||||||| |||||||| | || |||    
T  50873104 tgggggtcaaaactgccacatgtgcaaaacttagggggtagttttgtagtttttttcttagggggccaaaatcacaactttggaaaagttaagaggttaa 50873203  T
Q  134 aactgctattaagc 147  Q
    ||||||||||||||    
T  50873204 aactgctattaagc 50873217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 6927907 - 6927817
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    ||||||||||||||| ||||||| |||||||||||||||| ||||||||| ||||| | || |||||||||| |||| || |||||||||||    
T  6927907 ttttctaaataccttagaataaaattctcatctttatattccaaggaatg-ttattcctagtaataaatttgataaacttaaaacaaacaca 6927817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 24574378 - 24574292
Alignment:
Q  154 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| |||||||||||||||| ||||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  24574378 taaattccttggaataaaattctcatctttatatttcaaggaatgtt-attcctatgaataaatttggtaaacttgaaacaaacacac 24574292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 47115116 - 47115202
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| ||||||||||||||    
T  47115116 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacaca 47115202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 27178325 - 27178394
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||| |||||||||| || ||||||| ||||| | ||||| ||||||||||||||||||||||||||||    
T  27178325 agaccaagtcaaaattggcattgggggtcaaaactaccacagatgcaaaacttagggggtggttttgtag 27178394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 33329795 - 33329864
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| | |||||||||||||| ||||||| |||||| |||||||||  ||||||||||    
T  33329795 agaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaatacttaggggacggttttgtag 33329864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 1099011 - 1098924
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  1099011 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 1098924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 20414724 - 20414811
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| | |||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  20414724 ctaaattctttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 20414811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 24784025 - 24783934
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||| |||||||||| ||||||| |||||||||||||||| ||||||||| |||||   |  ||||||||||||||| |||||||||||||||    
T  24784025 ttttttaaataccttagaataaaattctcatctttatattccaaggaatg-ttattcttatgaataaatttggtaaacttgaaacaaacacac 24783934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 29512404 - 29512325
Alignment:
Q  161 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||| |||||| ||| ||||||||||||| |||||||||| ||| | || |||||||||||||||||||||||||||||||    
T  29512404 cttgaaataaaattcccatctttatattctaaggaatgtt-attcctaggaataaatttggtaaatttgaaacaaacacac 29512325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 44952120 - 44952033
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  44952120 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 44952033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 150
Target Start/End: Original strand, 25902553 - 25902669
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taa 133  Q
    ||||||||||| ||||||| |||||||||||| | || ||||||||||        ||||||| | ||||||||||||||||| ||||||| |||| |||    
T  25902553 gggggccaaaactgccacaaatgcaaaacttatgaggcggttttgtagttttttttcttagggagccaaaatcgcaactttgagaaagttagggggctaa 25902652  T
Q  134 aactgctattaagcctt 150  Q
    ||||| |||||||||||    
T  25902653 aactgatattaagcctt 25902669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 31611240 - 31611330
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| |||||   |  ||||||||||||||| ||||||||||||||    
T  31611240 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcataagaataaatttggtaaacttgaaacaaacaca 31611330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 46359763 - 46359677
Alignment:
Q  154 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  46359763 taaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 46359677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 3192909 - 3192774
Alignment:
Q  14 agaccgagtcaaaattagccttg-ggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||||||||||||||  ||||| |||||| ||| | | |||  || ||||||||||||  ||||||||||       |||||||| | |||| ||||||    
T  3192909 agaccgagtcaaaattgaccttgaggggcctaaactactacagttgaaaaacttaggggtcggttttgtagttttttccttaggggatgaaaagcgcaac 3192810  T
Q  113 tttgaaaaagttatggggtaaaactgctattaagcc 148  Q
    ||||||||||||| ||| ||||||| ||||||||||    
T  3192809 tttgaaaaagttaggggctaaaacttctattaagcc 3192774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 54464298 - 54464163
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||||||||||||||  ||||||||| ||||| ||||||| ||||||||||||||||   |||||||||        |||| ||| ||||||||| |||    
T  54464298 agaccgagtcaaaattgaccttgggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttctttttcttaagggatcaaaatcgtaac 54464199  T
Q  113 tttgaaaaagttatggg-gtaaaactgctattaagc 147  Q
    |||  |||||||| |||  |||||||||||||||||    
T  54464198 tttagaaaagttaggggactaaaactgctattaagc 54464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 28124695 - 28124779
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    |||||| |||||||||||| ||||||| |||||||| ||||||||| ||| | | | |||||||||||||||| ||||||||||||    
T  28124695 ctaaattccttggaataaaattctcatatttatattccaaggaatg-ttaatcctaaaaataaatttggtaaacttgaaacaaaca 28124779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 43747458 - 43747527
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||||   | |||||||||||| ||||| | ||||||||||||||||| ||||||||||    
T  43747458 agaccgagtcaaaattgatcgtgggggccaaaactgccataaatgcaaaacttagggggcggttttgtag 43747527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 3916565 - 3916429
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||||||||||||||  | ||||||||||||| ||||||| ||||||||||||| | | | ||||||||        |||| |||| ||||||| ||||    
T  3916565 agaccgagtcaaaattgactttgggggccaaaactgccacagatgcaaaacttagtgagcgattttgtagttttttttctta-ggggccaaaatcacaac 3916467  T
Q  113 tttgaaaaagttatggggtaaaactgctattaagcctt 150  Q
    ||  ||||| ||| ||| ||||||||||||||||||||    
T  3916466 ttaaaaaaatttaggggttaaaactgctattaagcctt 3916429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 27823087 - 27822996
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||||||  |||||| ||||||| ||||| ||| || ||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  27823087 ttttctaaataccttaaaataaaattctcatatttatgttcgaaagaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 27822996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 28712590 - 28712489
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||| || |||||||| || |||| ||| ||| ||||||||||||||||| | ||||||||       ||||||||| ||||||| |||||    
T  28712590 agaccgagtcaaagttggccttgggtgctaaaactgctacagatgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaact 28712491  T
Q  114 tt 115  Q
    ||    
T  28712490 tt 28712489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 38140623 - 38140710
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 236  Q
    ||||||| ||||||||||||||| ||| || ||||||||| ||||||||| ||||| | ||||||||||||  |||| |||||||||||    
T  38140623 ttttctatataccttggaataaaattcacacctttatattccaaggaatg-ttattcctagaaataaattttataaaattgaaacaaac 38140710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 53165983 - 53166070
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||| | | |||||||||| ||||||||||| |||||   ||||||||||| | |||| |||||||||||||||    
T  53165983 ctaaataccttggaataaaatacccatctttatatttcaaggaatg-ttattcttagaaataaattggataaacttgaaacaaacacac 53166070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 6231761 - 6231847
Alignment:
Q  154 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| |||  ||||||||||| ||||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  6231761 taaattccttggaataaaattcctatctttatatttcaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 6231847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 72
Target Start/End: Complemental strand, 25843494 - 25843443
Alignment:
Q  21 gtcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 72  Q
    ||||||||| ||||||||| |||||| ||||||| |||||||||||||||||    
T  25843494 gtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaggggg 25843443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 26849400 - 26849491
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||||||| |||||| ||  ||||||||||||| | |||   ||||| | | |||||||||||||||| || ||||||||||||    
T  26849400 ttttctaaataccttgaaataaaatttccatctttatattccaagaaatattattcctaaaaataaatttggtaaacttaaaacaaacacac 26849491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 578586 - 578648
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 71  Q
    |||| |||||||||||||||| |||||||||||||||| | |||||  || ||||||||||||    
T  578586 agcatagaccgagtcaaaattggccttgggggccaaaactaccacaggtgaaaaacttagggg 578648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 20432362 - 20432497
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaa-cttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||| ||||||||||  ||||||||| ||||| ||||||| ||| |||| ||||||||||| ||||||||       ||||||||  ||||||| ||||    
T  20432362 agaccaagtcaaaattgtccttgggggtcaaaactgccacagatgtaaaaacttagggggtgattttgtag-ttttttcttaggggaccaaaatcacaac 20432460  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    |||  |||||||| |||| ||||| ||||||||||||    
T  20432461 ttttgaaaagttagggggttaaaaatgctattaagcc 20432497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 25154381 - 25154496
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatggggt-aa 133  Q
    ||||||||||| ||| |||  ||||||||||| |||| ||||||||||        |||||| |||||||||| ||||||||  ||||||| ||||| ||    
T  25154381 gggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttcttaggaggtcaaaatcacaactttggtaaagttagggggttaa 25154480  T
Q  134 aactgctattaagcct 149  Q
    ||||||||||||||||    
T  25154481 aactgctattaagcct 25154496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 32071080 - 32070999
Alignment:
Q  155 aaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 236  Q
    ||||||||||||||||| |||||||||||||||| |||| |||| |||||   || |||||||||| ||||||| ||||||||    
T  32071080 aaataccttggaataaaattctcatctttatattccaagaaatg-ttattcataggaataaatttgataaatttaaaacaaac 32070999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 36677691 - 36677745
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggg 70  Q
    ||||||||||||||  |||||| |||||||||||||||| ||||||| |||||||    
T  36677691 accgagtcaaaattgaccttggaggccaaaattgccacaaatgcaaatcttaggg 36677745  T

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Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 1814735 - 1814866
Alignment:
Q  14 agaccgagtcaaaattagcctt-gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||||||||||||||   ||| ||||||||||| |||||    |||||||||||||||  ||||||||||       ||||||||  |||||||| |||    
T  1814735 agaccgagtcaaaattgatcttagggggccaaaactgcca----tgcaaaacttaggggacggttttgtagtttttttcttaggggtccaaaatcgaaac 1814830  T
Q  113 tttgaaaaagttatg-gggtaaaactgctattaagc 147  Q
    |||| |||||||| | || |||||||||||||||||    
T  1814831 tttggaaaagttaggaggctaaaactgctattaagc 1814866  T

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Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 3192982 - 3193096
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggt-aaa 134  Q
    ||||||||||| ||  |||  |||||||||||||||  ||||||| ||       ||||||||||||||||||||||||    ||||||| ||||| |||    
T  3192982 gggggccaaaactgttacagttgcaaaacttaggggtcggttttgaagtttttttcttagggggtcaaaatcgcaacttcttgaaagttagggggtgaaa 3193081  T
Q  135 actgctattaagcct 149  Q
    |||||||||||||||    
T  3193082 actgctattaagcct 3193096  T

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Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 12228509 - 12228600
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||| |||||||||| ||||||| |||||||||||||| |||||  |||| ||||| |||  |||||||||| |||| ||| |||||||||||    
T  12228509 ttttttaaataccttagaataaaattctcatctttatatttcaaataatg-ttattcccaagaataaatttgataaacttgtaacaaacacac 12228600  T

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Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 49216116 - 49216076
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc 189  Q
    ||||||||||||||||||||||| ||| |||||||||||||    
T  49216116 ttttctaaataccttggaataaaattcccatctttatattc 49216076  T

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Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 14349365 - 14349423
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||||| ||||||||||||| | |||||||| ||||  ||||||||||||||||||    
T  14349365 ttagggggttaaaatcgcaacttcgtaaaagttagggggcgaaaactgctattaagcct 14349423  T

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Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 28204537 - 28204479
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||||||||||||||||||| |  ||||||| ||||  ||||||||||||||||||    
T  28204537 ttagggggtcaaaatcgcaacttcgtgaaagttaaggggcgaaaactgctattaagcct 28204479  T

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Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 33329669 - 33329611
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagtta-tggggtaaaactgctattaagcc 148  Q
    |||||||||||||||||||||||| | ||||||||  |||  |||||||||||||||||    
T  33329669 cttagggggtcaaaatcgcaacttcgtaaaagttagagggcgaaaactgctattaagcc 33329611  T

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Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 36687771 - 36687825
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggg 70  Q
    ||||||||||||||  | |||| |||||||||||||||| ||||||| |||||||    
T  36687771 accgagtcaaaattgacattggaggccaaaattgccacaaatgcaaatcttaggg 36687825  T

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Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 44624759 - 44624690
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggt-ggttttgtag 83  Q
    |||||||||||||||| ||||| ||| |||||| ||||||| ||||||||| |||||| | ||||||||||    
T  44624759 agaccgagtcaaaattggcctt-gggaccaaaactgccacagatgcaaaacataggggatcggttttgtag 44624690  T

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Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 46226831 - 46226765
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    ||||||| |||||| || | ||||||||||| |||||||  |||||||| ||||||||||| |||||    
T  46226831 accgagttaaaattggcatcgggggccaaaactgccacaggtgcaaaacatagggggtggtattgta 46226765  T

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Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 1938452 - 1938383
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||||  | ||| ||||||||| | |||||  ||||||||||| |||| ||||||||||    
T  1938452 agaccgagtcaaaattgactttgtgggccaaaactaccacaggtgcaaaacttaaggggcggttttgtag 1938383  T

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Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 7218335 - 7218384
Alignment:
Q  20 agtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagg 69  Q
    ||||||||||  ||||||||||||||| ||||||| ||| ||||||||||    
T  7218335 agtcaaaattgaccttgggggccaaaactgccacagatgtaaaacttagg 7218384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 8024960 - 8025017
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 71  Q
    ||||||||| |||||| | ||||| |||||||| | ||||| ||||||||||||||||    
T  8024960 agaccgagttaaaattggtcttggaggccaaaactaccacatatgcaaaacttagggg 8025017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 9320719 - 9320795
Alignment:
Q  164 ggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||| |||||||||||||||| ||||||||| ||||| | |  |||||||||  |||| |||||||||||||||    
T  9320719 ggaataaaattctcatctttatattccaaggaatg-ttattcctatgaataaatttcataaacttgaaacaaacacac 9320795  T

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Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 28712683 - 28712777
Alignment:
Q  57 tgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    |||||||||||||||| | ||||||||       ||||||||| ||||||| ||||||   |||||||| ||||  |||||||||||||||||||    
T  28712683 tgcaaaacttagggggcgattttgtagtttttttcttagggggccaaaatcacaacttcataaaagttagggggcgaaaactgctattaagcctt 28712777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 48348437 - 48348505
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| | ||||||| | |||| ||||||| |||||||||||| |||| | ||||||||    
T  48348437 agaccgagtcaaaattgggcttggggtc-aaaactgccacatatgcaaaacttaaggggcgattttgtag 48348505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 49787386 - 49787321
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggtttt 79  Q
    ||||||||||||||||  | |||| |||||||| ||||||| |||||||||||  ||| |||||||    
T  49787386 agaccgagtcaaaattgactttggaggccaaaactgccacagatgcaaaacttgagggatggtttt 49787321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 86705 - 86653
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggg 70  Q
    |||||||||||| | |||||||||||||| ||| |||  ||||||||||||||    
T  86705 cgagtcaaaattggtcttgggggccaaaactgctacaagtgcaaaacttaggg 86653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 2566492 - 2566524
Alignment:
Q  207 agaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||||||||||||||| ||||||||||||||    
T  2566492 agaaataaatttggtaaacttgaaacaaacaca 2566524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 20297605 - 20297518
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| ||||| |||||| ||| ||||||||||||| || ||||||| ||| | |  ||||||||||||||| || ||||||||||||    
T  20297605 ctaaattccttgaaataaaattcccatctttatattccaaagaatgtt-attcctaagaataaatttggtaaacttaaaacaaacacac 20297518  T

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Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 72
Target Start/End: Complemental strand, 28944154 - 28944106
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 72  Q
    |||||| |||||||||||||||| ||| |||  ||||||||||||||||    
T  28944154 aaaattggccttgggggccaaaactgctacatgtgcaaaacttaggggg 28944106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 36677783 - 36677827
Alignment:
Q  102 aaaatcgcaactttg-aaaaagttatggggtaaaactgctattaa 145  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||    
T  36677783 aaaatcgcaactttggaaaaatttagggggtaaaactgctattaa 36677827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 4e-25; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 149
Target Start/End: Original strand, 10727378 - 10727509
Alignment:
Q  20 agtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaa 118  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||        ||||||||| ||||||| |||||||| |    
T  10727378 agtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcacaactttgga 10727477  T
Q  119 aaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||| |||| |||||||||||||| ||||    
T  10727478 aaagttagggggctaaaactgctattatgcct 10727509  T

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Target: chr6; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 33399920 - 33399785
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||  |||| |||||||||| ||||||| ||| |||||||||||   ||||||||||       ||||| ||| |||||||||||||    
T  33399920 agaccgagtcaaaattgaccttaggggccaaaactgccacaaatgtaaaacttagggtccggttttgtagtttttttcttagagggccaaaatcgcaact 33399821  T
Q  114 ttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    ||| |||||||| ||| |||||||||||||||||||    
T  33399820 ttggaaaagttaggggctaaaactgctattaagcct 33399785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 30349484 - 30349347
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||| |||| |||||||||| ||||| | ||||| |||||||||||| |||| ||||||||||       |||||||| ||||||||||||||    
T  30349484 agaccgagtcataattggccttgggggtcaaaactaccacagatgcaaaacttaaggggcggttttgtagtttttttcttaggggctcaaaatcgcaact 30349385  T
Q  114 ttgaaaaagtta-tggggtaaaactgctattaagcctt 150  Q
    |||  |||||||  ||| ||||||||||||||||||||    
T  30349384 ttgggaaagttagagggctaaaactgctattaagcctt 30349347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 6036844 - 6036976
Alignment:
Q  20 agtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaa 119  Q
    |||||||||| || ||||||| ||||| ||||||| ||||||||||||||||   |||||||||       |||||| || |||||||||||||||  ||    
T  6036844 agtcaaaattggctttgggggtcaaaactgccacatatgcaaaacttaggggacagttttgtagttttcttcttaggaggccaaaatcgcaactttagaa 6036943  T
Q  120 aagttatggggtaaaactgctattaagcctttt 152  Q
    |||||| ||| ||||||||||||||||| ||||    
T  6036944 aagttaggggctaaaactgctattaagcttttt 6036976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 6706007 - 6706095
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||| ||||| | ||||||||| |||||||| ||||||||||||    
T  6706007 ttttctaaataccttagaataaaattctcatctttatatttcaaggaatg-ttattcctagaaataaaattggtaaacttgaaacaaaca 6706095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 14170827 - 14170739
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 241  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |||||||||||||||||| ||||||||||||||||    
T  14170827 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacaca 14170739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 26311582 - 26311651
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||||  ||||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  26311582 agaccgagtcaaaattgaccttgggggccaaaactgccacatatgcaaaacttaaggggtggttttgtag 26311651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 2853598 - 2853731
Alignment:
Q  19 gagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnnctta-gggggtcaaaatcgcaactttg 116  Q
    ||||||||||| |||||||||||||||| ||||||| ||| ||||||||||||| ||||||||||        |||| ||||| |||||| |||||||||    
T  2853598 gagtcaaaattggccttgggggccaaaactgccacatatgaaaaacttagggggcggttttgtagttttttttcttaggggggccaaaattgcaactttg 2853697  T
Q  117 aaaaagttatg-gggtaaaactgctattaagcct 149  Q
    | ||||||| | || |||||||||||||||||||    
T  2853698 agaaagttaggaggttaaaactgctattaagcct 2853731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 12766403 - 12766530
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagt 123  Q
    |||||| |||||||||||||||| ||| |||  ||||||||||| |||| ||||||||||        |||||||| |||||||||||||| |  |||||    
T  12766403 aaaattggccttgggggccaaaactgctacagttgcaaaacttaaggggcggttttgtagttttttttttagggggccaaaatcgcaacttcgtgaaagt 12766502  T
Q  124 tatggggt-aaaactgctattaagcctt 150  Q
    || ||||| |||||||||||||||||||    
T  12766503 tagggggtgaaaactgctattaagcctt 12766530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 12328158 - 12328075
Alignment:
Q  148 cttttctaaataccttggaataaatttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaaca 233  Q
    ||||||||||||| ||| ||| || ||| ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||    
T  12328158 cttttctaaatacattg-aatgaaattcacatctttatattcaaagaatgtt-attactagaaataaatttggtaaatttgaaaca 12328075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 1316831 - 1316744
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||| ||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  1316831 ctaaattccttggaataaaattctcatctttatattccaaagaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 1316744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 10246375 - 10246462
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  10246375 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 10246462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 14781865 - 14781955
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||||| ||||||||||||| || ||| ||||| ||||| |||| |||||||||||||||  ||||||||||||||    
T  14781865 ttttctaaataccttggaataaaattctcatctttatgttccaatgaatg-ttattcccaggaataaatttggtaaa-atgaaacaaacacac 14781955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 16968737 - 16968650
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||| ||||| ||||| | ||||||||||||| |||| |||||||||||||||    
T  16968737 ctaaattccttggaataaaattctcatctttatattccaaagaatg-ttattcctagaaataaatttgataaacttgaaacaaacacac 16968650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 144
Target Start/End: Original strand, 20474885 - 20475014
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactt 114  Q
    |||||||||| |||  | ||||||||||||| ||||||| |||||||||||||||||  |||||||||        |||| ||| |||||||||||||||    
T  20474885 accgagtcaacattgacattgggggccaaaactgccacagatgcaaaacttaggggg-cgttttgtagttttttttcttaagggatcaaaatcgcaactt 20474983  T
Q  115 tgaaaaagttatgggg-taaaactgctatta 144  Q
    ||||||||||| |||| ||||| ||||||||    
T  20474984 tgaaaaagttagggggctaaaattgctatta 20475014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 2657512 - 2657425
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  2657512 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 2657425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 18897733 - 18897646
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  18897733 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 18897646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 26601596 - 26601528
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||||||||||||| | ||||||| |||||  || |||| |||||||||||||||||||||||||||    
T  26601596 agaccgagtcaaaattggtcttggggaccaaagctgtcacagatgcaaaacttagggggtggttttgta 26601528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 32143394 - 32143326
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||||||||||||| | |||||||||||||| |||||||  ||||||||||| |||| |||||||||    
T  32143394 agaccgagtcaaaattggtcttgggggccaaaactgccacaggtgcaaaacttaaggggcggttttgta 32143326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 82
Target Start/End: Complemental strand, 6036770 - 6036712
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||| |||||||||||||||| ||||||| |||||||||||||||| | ||||||||    
T  6036770 aaaattggccttgggggccaaaactgccacatatgcaaaacttaggggatagttttgta 6036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 1377348 - 1377275
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||| ||||||||||||||| ||||||| |||||||||  |||||| |||||||| |||||||| | |||||||    
T  1377348 agcatagaccgagtcaaaataagccttgagggccaaaacagccacaaatgcaaaatttagggggcgattttgta 1377275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 1385096 - 1385023
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||| ||||||||||||||| ||||||| |||||||||  |||||| |||||||| |||||||| | |||||||    
T  1385096 agcatagaccgagtcaaaataagccttgagggccaaaacagccacaaatgcaaaatttagggggcgattttgta 1385023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 2203407 - 2203468
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgg-ggtaaaactgctattaagcctttt 152  Q
    |||||| |||||| |||||||||||||||||||| || | ||||||||||||||||||||||    
T  2203407 ttagggcgtcaaagtcgcaactttgaaaaagttaaggagttaaaactgctattaagcctttt 2203468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 8029107 - 8029028
Alignment:
Q  161 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||| ||  ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  8029107 cttggaataaaatttccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 8029028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 7053838 - 7053924
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| ||| ||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  7053838 taaattccttggaataaaattcccatatttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 7053924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 30349612 - 30349671
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatggg-gtaaaactgctattaagcct 149  Q
    ||||||||| ||||||||||||||||||||||||| |||   ||||||||||||||||||    
T  30349612 cttagggggccaaaatcgcaactttgaaaaagttaggggacaaaaactgctattaagcct 30349671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 17532387 - 17532318
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||| | || || |||||||||| |||||||  ||||||||||| |||| ||||||||||    
T  17532387 agaccgagtcaaaactggctttaggggccaaaactgccacaggtgcaaaacttaaggggcggttttgtag 17532318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 21008234 - 21008322
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    |||||||||| |||||||||||| ||||||||||||||||| ||| |||||| |||   | ||||||||||  |||| ||||||||||||    
T  21008234 ttttctaaatgccttggaataaaattctcatctttatattccaagaaatgtt-attcataaaaataaatttaataaacttgaaacaaaca 21008322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 145
Target Start/End: Complemental strand, 32143306 - 32143261
Alignment:
Q  100 tcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaa 145  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||||    
T  32143306 tcaaaatcgcaactttgaaaaagttaggggctaaatctgctattaa 32143261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 3579711 - 3579594
Alignment:
Q  33 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggg-gt 131  Q
    |||||||||||||| ||| |||  |||||||||||||||| ||||||||||        ||| |||| |||||||||||||| |  ||||||| |||       
T  3579711 cttgggggccaaaagtgctacagttgcaaaacttagggggcggttttgtagttttttttttacggggccaaaatcgcaacttcgtgaaagttaagggacg 3579612  T
Q  132 aaaactgctattaagcct 149  Q
    ||||||||||||||||||    
T  3579611 aaaactgctattaagcct 3579594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 17248694 - 17248636
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaagcc 148  Q
    ||||| || |||||||||||||||| ||||||||| | || ||||||||||||||||||    
T  17248694 cttagaggatcaaaatcgcaactttaaaaaagttaggaggctaaaactgctattaagcc 17248636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 8223987 - 8224048
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagtt-atggggtaaaactgctattaagcctttt 152  Q
    ||||||| ||||||||||||||||  ||||||| || ||  |||||||||||||||||||||    
T  8223987 ttaggggatcaaaatcgcaactttagaaaagttaataggtcaaaactgctattaagcctttt 8224048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 9762298 - 9762386
Alignment:
Q  152 tctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||| ||||||| ||| ||| |||||| || |||||||||| ||| | |  |||||| |||||||| |||||||||||||||    
T  9762298 tctaaatacctttgaataaaattcacatatttataatccaaggaatgtt-attcctaataataaacttggtaaacttgaaacaaacacac 9762386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 70
Target Start/End: Complemental strand, 3812875 - 3812820
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggg 70  Q
    |||||| ||||||||| | ||||||| |||||| ||||||| |||||||||||||||    
T  3812875 agaccgggtcaaaattggtcttgggg-ccaaaactgccacatatgcaaaacttaggg 3812820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4037170 - 4037106
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||||||||| | |||||||||||||| ||||| | || ||| || |||||||| ||||||||    
T  4037170 cgagtcaaaattggtcttgggggccaaaactgccaaagatccaatacatagggggttgttttgta 4037106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 24119706 - 24119738
Alignment:
Q  20 agtcaaaattagccttgggggccaaaattgcca 52  Q
    |||||||| ||||||||||||||||||||||||    
T  24119706 agtcaaaagtagccttgggggccaaaattgcca 24119738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 4e-25; HSPs: 82)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 14943723 - 14943861
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||| ||||||||||       |||| | |  ||||||| |||||    
T  14943723 agaccgagtcaaaattagccttgggggccaaaaatgccacaggtgcaaaacttagagggcggttttgtagtttttttctta-gagaccaaaatcacaact 14943821  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcctttt 152  Q
    ||| |||||||| |||| ||||||||||||||||||||||    
T  14943822 ttggaaaagttaaggggctaaaactgctattaagcctttt 14943861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 43028929 - 43028791
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| ||| | | |||||||| ||||||| ||||||||||||||||| ||||||||||        ||||||||| ||||||||||||    
T  43028929 agaccgagtcaaaattggccctagaggccaaaactgccacagatgcaaaacttaggggg-ggttttgtagttttttttcttagggggccaaaatcgcaac 43028831  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagccttt 151  Q
    |||| | |||||| |||| |||||||||||||||||||||    
T  43028830 tttggagaagttagggggctaaaactgctattaagccttt 43028791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 5470510 - 5470650
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcg 108  Q
    |||| |||||||||||||||| |||||||||||||||| ||||||| ||| |||||||| |||| ||||||||||        |||||||| ||||||||    
T  5470510 agcatagaccgagtcaaaattggccttgggggccaaaactgccacagatgtaaaacttaaggggcggttttgtagttttttt-ttagggggccaaaatcg 5470608  T
Q  109 caactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    |||||||   ||||||| |||| |||||||||||| ||||||    
T  5470609 caactttaggaaagttagggggctaaaactgctataaagcct 5470650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 37192334 - 37192247
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  37192334 ctaaattccttggaataaaattctcatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 37192247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 39918570 - 39918434
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| ||||||||||||||||  |||||| ||||||||||||| ||| | ||||| ||        ||||||||| ||||||||||||    
T  39918570 agaccgagtcaaaattggccttgggggccaaaacagccacatatgcaaaacttagcgggcgattttgcagttttttttcttagggggccaaaatcgcaac 39918471  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    ||||| ||||||| |||| ||||||| ||||||||||    
T  39918470 tttgagaaagttagggggctaaaactactattaagcc 39918434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 37233242 - 37233149
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacacagtgat 246  Q
    ||||||||||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| ||||||||||||||| |||||    
T  37233242 ctaaataccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacacggtgat 37233149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 34679233 - 34679095
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggt-ggttttgtagnnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||| ||||||||| | ||||| |||||||| |||||||  ||||||||||||||||  |||||||||        |||||| || ||||||||||||    
T  34679233 agaccgggtcaaaatttgtcttggaggccaaaactgccacatgtgcaaaacttaggggggcggttttgtaatttttttcttaggtggccaaaatcgcaac 34679134  T
Q  113 tttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    |||| |||||||| |||| ||||||||||||||||||||    
T  34679133 tttggaaaagttagggggctaaaactgctattaagcctt 34679095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 13760783 - 13760692
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | |||||||||||||| ||| |||||||||||||||    
T  13760783 ttttctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctagaaataaatttggcaaacttgaaacaaacacac 13760692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 17965795 - 17965708
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  17965795 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 17965708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 44617917 - 44617985
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||| |||||||||    
T  44617917 agaccgagtcaaaattggtcttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgta 44617985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 2609267 - 2609399
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||   |||||||| ||||| ||||||| ||| |||||||| |||| | ||||||||       ||||||||  |||||||||||||    
T  2609267 agaccgagtcaaaattgatcttgggggtcaaaactgccacatatgtaaaacttatggggcgattttgtagtttttttcttaggggaccaaaatcgcaact 2609366  T
Q  114 ttgaaaaagtta-tggggtaaaactgctattaa 145  Q
    |||||||||||| || | |||||||||||||||    
T  2609367 ttgaaaaagttattgagttaaaactgctattaa 2609399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 25333634 - 25333498
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||| |||||||||| ||||||| | |||||| |||||||  ||||||||||||||||||||||| |||       |||| |||  |||||||||||||    
T  25333634 agaccaagtcaaaattggccttggagaccaaaactgccacaggtgcaaaacttagggggtggttttatagtttttttcttaagggaccaaaatcgcaact 25333535  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||| |||||||| |||| ||||| || ||||||||||    
T  25333534 ttggaaaagttaaggggttaaaattgttattaagcct 25333498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 5003096 - 5003181
Alignment:
Q  155 aaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||| ||| | | ||||||||||||||||||| ||||||||||||    
T  5003096 aaataccttggaataaaattcgcatctttatattccaaggaatgtt-attcctataaataaatttggtaaattttaaacaaacacac 5003181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 6592862 - 6592723
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn----cttagggggtcaaaatcgc 109  Q
    |||| |||||||||||||| ||| ||||||||| ||||||| ||||||||||||||||  | |||||||            |||||||||||||||||||    
T  6592862 agactgagtcaaaattagcattgagggccaaaactgccacatatgcaaaacttaggggcag-ttttgtaaaaaaaaatcttcttagggggtcaaaatcgc 6592764  T
Q  110 aactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||| |||||||| |||| |||||||||||||||||||    
T  6592763 aactttggaaaagttagggggctaaaactgctattaagcct 6592723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 3902273 - 3902181
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 241  Q
    ||||||||||| ||||||||||| ||| |||||||||| ||||||||||| ||||| | | |||||||| ||||||| ||||||||||||||||    
T  3902273 ttttctaaatatcttggaataaaattcccatctttatatttcaaggaatg-ttattcctaaaaataaatatggtaaacttgaaacaaacacaca 3902181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 37431679 - 37431610
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||| ||| | ||||||||    
T  37431679 agaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttagtgggcgattttgtag 37431610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 346604 - 346691
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  346604 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 346691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 4559371 - 4559284
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| |||   |||||||||||||||||| |||||||||||||||    
T  4559371 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcttagaaataaatttggtaaacttgaaacaaacacac 4559284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 6171603 - 6171516
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  6171603 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 6171516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 28311955 - 28312042
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||| ||||| | |  ||||||||||||||| |||||||||||||||    
T  28311955 ctaaataccttggaataaaattcccatctttatattccaaggaatg-ttattcctatgaataaatttggtaaacttgaaacaaacacac 28312042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 40569834 - 40569743
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||||| ||  ||| | ||||||| |||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  40569834 ttttctaaataccttggaataaaatttacatatatatattccaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 40569743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 31 - 150
Target Start/End: Complemental strand, 21361999 - 21361879
Alignment:
Q  31 gccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggg 129  Q
    |||||||| ||||||| |||||||  |||||||||||||||||| ||||||||        |||| |||| ||||||||||||||||| ||||||| |||    
T  21361999 gccttgggagccaaaactgccacatgtgcaaaacttagggggtgtttttgtagttttttttcttaaggggccaaaatcgcaactttgataaagttagggg 21361900  T
Q  130 gtaaaactgctattaagcctt 150  Q
      |||| ||||||||||||||    
T  21361899 caaaaattgctattaagcctt 21361879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 9734105 - 9734190
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 238  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | |||||||||||||||||| || ||||||||||    
T  9734105 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctagaaataaatttggtaaacttaaaacaaacac 9734190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 14489407 - 14489525
Alignment:
Q  31 gccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg 130  Q
    |||||||||||||||| |||||||  |||||||||||||||||| ||||||||       |||| |||| |||||||||||||| |  ||||||| ||||    
T  14489407 gccttgggggccaaaactgccacagttgcaaaacttagggggtgattttgtagtttttttctta-ggggccaaaatcgcaacttcgtgaaagttaggggg 14489505  T
Q  131 -taaaactgctattaagcct 149  Q
      ||||||||||||||||||    
T  14489506 cgaaaactgctattaagcct 14489525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Original strand, 16043203 - 16043269
Alignment:
Q  17 ccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||| |||| |||||    
T  16043203 ccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacatagggggcggttctgtag 16043269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 34760976 - 34760914
Alignment:
Q  21 gtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||| | |||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  34760976 gtcaaaattggtcttgggggccaaaactgccacatatgcaaaacttagggggcggttttgtag 34760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 151
Target Start/End: Complemental strand, 14489349 - 14489211
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| | ||||| || ||||| |||||||  |||||||||||||||| |||||||||        |||| |||| ||||||| |||||    
T  14489349 agaccgagtcaaaattggtcttggaggtcaaaactgccacaggtgcaaaacttagggggcggttttgtaatttttttcttaaggggccaaaatcacaact 14489250  T
Q  114 ttgaaaaagtta-tggggtaaaactgctattaagccttt 151  Q
    ||   |||||||  ||| |||||||||||||||||||||    
T  14489249 tttggaaagttagagggctaaaactgctattaagccttt 14489211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 32969693 - 32969624
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| |||||||| ||||||| ||||||| ||| ||||||||||||| | ||||||||    
T  32969693 agaccgagtcaaaattggccttgggagccaaaactgccacaaatgaaaaacttagggggcgattttgtag 32969624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 40951118 - 40951202
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    |||||| | |||||||||| || |||||||||||||| |||||||||| ||| | || ||||||||||||||||||||||||||||    
T  40951118 ctaaattctttggaataaaattttcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaatttgaaacaaaca 40951202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 2050678 - 2050591
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||||||||||||    
T  2050678 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaaaaataaatttgataaacttgaaacaaacacac 2050591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 11071417 - 11071330
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  11071417 ctaaattccttggaataaaattcccatctttatatttcaaggaatgtt-attcctatgaataaatttggtaaacttgaaacaaacacac 11071330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 14777757 - 14777844
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  14777757 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 14777844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 18713911 - 18714002
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||| ||||||||||  |||||||||||||||| ||||||||| ||||| | | |||||||||||||||  ||||| |||||||||    
T  18713911 ttttctaaatatcttggaataatattctcatctttatattccaaggaatg-ttattcctataaataaatttggtaagcttgaatcaaacacac 18714002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 20426737 - 20426828
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||| ||| |||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| || ||||||||||||    
T  20426737 ttttctaaatacattgaaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaactttaaacaaacacac 20426828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 37533765 - 37533678
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||| ||||| |||||||||| ||| | |||||||||||| ||||| |||||||||||||||    
T  37533765 ctaaattccttggaataaaattcccatctttttattccaaggaatgtt-attcctagaaataaatttagtaaacttgaaacaaacacac 37533678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 39819506 - 39819415
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||||| |||||||| ||  ||||||||||||| || ||||||| ||| | |  |||||||||||||||||||||||||||||||    
T  39819506 ttttctaaatacctgggaataaaatttccatctttatattccaaagaatgtt-attcctatgaataaatttggtaaatttgaaacaaacacac 39819415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 41729389 - 41729476
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | |  ||||||||||||||| |||||||||||||||    
T  41729389 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacacac 41729476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 1623167 - 1623078
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||||||||| ||| |||||| ||||||||||||||||| ||| |||||| ||||| || ||||||||| ||||| ||||||||||||||    
T  1623167 ttttctaaatac-ttgaaataaaattctcatctttatattccaagaaatgtt-attactaggaataaatttagtaaaattgaaacaaacaca 1623078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 3254347 - 3254437
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    ||||||||||||||| ||||||| ||||||| |||||||| ||| ||||| ||||| | | |||||||||||||||| || |||||||||||    
T  3254347 ttttctaaataccttagaataaaattctcatttttatattccaaagaatg-ttattcctaaaaataaatttggtaaacttaaaacaaacaca 3254437  T

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Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 5770370 - 5770456
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| |||  |||||||||||| |||||||||| ||| | ||||||||||||| |||| |||||||||||||||    
T  5770370 taaattccttggaataaaattcctatctttatattccaaggaatgtt-attcctagaaataaatttgataaacttgaaacaaacacac 5770456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 8857181 - 8857114
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||| |||||||||| || ||||||||||||| ||||||| |||||||||||||| || |||||||||    
T  8857181 gaccaagtcaaaattggcattgggggccaaaactgccacaaatgcaaaacttaggaggcggttttgta 8857114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 11763655 - 11763737
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaa 231  Q
    ||||||| ||||||||||||||| |||||||||||||||| ||||||||| ||||| | |  ||||||||||||||| ||||||    
T  11763655 ttttctagataccttggaataaaattctcatctttatattccaaggaatg-ttattcctaagaataaatttggtaaacttgaaa 11763737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 5008466 - 5008520
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttag 68  Q
    ||||||||||||||||  ||||| ||||||||||||||||| |||||||||||||    
T  5008466 agaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttag 5008520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 149
Target Start/End: Complemental strand, 31827639 - 31827524
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatggggt-aa 133  Q
    ||||||||||| || |||| ||||||| ||||||||||| ||||||||        ||||||||| ||||||| |||||||| |||||||| || || ||    
T  31827639 gggggccaaaactggcacagatgcaaagcttagggggtgattttgtagtcttttttcttaggggggcaaaatcacaactttggaaaagttagggagttaa 31827540  T
Q  134 aactgctattaagcct 149  Q
    ||||||||||||||||    
T  31827539 aactgctattaagcct 31827524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 14832627 - 14832535
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 241  Q
    ||||||||||| || |||||||| || |||||||||||||  |||||||||| |||    ||||||||||||||||| ||||||||||||||||    
T  14832627 ttttctaaatatctaggaataaaattatcatctttatattttaaggaatgtt-attcttggaaataaatttggtaaacttgaaacaaacacaca 14832535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 25411682 - 25411609
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||| |||||||||||||||| |  |||||||  |||| ||||||| ||||||||||||||||| |||||||||    
T  25411682 agcatagaccgagtcaaaattggtattgggggtgaaaactgccacagatgcaaaacttagggggcggttttgta 25411609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 153
Target Start/End: Original strand, 31827721 - 31827850
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagt 123  Q
    |||||| |||||||||||||||| ||| |||  |||||||||||||||||| |||||||        |||||| ||||| ||||||||||| | ||||||    
T  31827721 aaaattggccttgggggccaaaactgctacagttgcaaaacttagggggtgattttgta-tttttttcttaggaggtcataatcgcaacttcgtaaaagt 31827819  T
Q  124 tatgggg-taaaactgctattaagccttttc 153  Q
    || ||||  |||| |||||||||||| ||||    
T  31827820 tagggggcgaaaattgctattaagccatttc 31827850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 239
Target Start/End: Complemental strand, 45693999 - 45693915
Alignment:
Q  155 aaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||| |||||||||||| ||||||||||||| ||| |||||||||| ||| | |  ||||||||||||||| ||||||||||||||    
T  45693999 aaatgccttggaataaaattctcatctttatgttccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacaca 45693915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 7007401 - 7007310
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||| || ||||||| |||||||||||||| |||||| |||| ||||| | |  ||||||||||||||| || ||||||||||||    
T  7007401 ttttctaaatactttagaataaaattctcatctttatatttcaagaaatg-ttattcctaataataaatttggtaaacttaaaacaaacacac 7007310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 36 - 151
Target Start/End: Complemental strand, 16043203 - 16043086
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttg-aaaaagttatggggtaa 133  Q
    |||||||||||||| |||| ||||||||  ||||||  ||||||||||        ||||||||| ||||| |||||||||| ||||||||| ||| |||    
T  16043203 gggggccaaaattgtcacaaatgcaaaagataggggacggttttgtagttttttttcttagggggccaaaaccgcaactttggaaaaagttaggggataa 16043104  T
Q  134 aactgctattaagccttt 151  Q
    ||||| ||||||||||||    
T  16043103 aactgttattaagccttt 16043086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 23943979 - 23943888
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| | ||  |||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  23943979 ttttctaaattctttacaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 23943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 42674920 - 42675007
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||  |||||||||||| ||| |||||| ||| | || ||||||||||||||| |||||||||||||||    
T  42674920 ctaaattccttggaataaaattcctatctttatattccaagaaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 42675007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 638405 - 638319
Alignment:
Q  154 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| || || |||||||||    
T  638405 taaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttaaatcaaacacac 638319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 235
Target Start/End: Complemental strand, 13539485 - 13539399
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 235  Q
    |||||||||||  || ||||||| ||||||||||||| ||| ||| |||||| || |||| |||||||||||||||| ||||||||||    
T  13539485 ttttctaaatattttagaataaaattctcatctttatgttccaagaaatgtt-atcaccaaaaataaatttggtaaacttgaaacaaa 13539399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 25375129 - 25375188
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||||| |||||||||||| |||||||| ||| |||| |||||||||||||||||||    
T  25375129 cttagggggccaaaatcgcaacattgaaaaaattagggggctaaaactgctattaagcct 25375188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 27489566 - 27489499
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||  |||||| |||||||| ||||||| |||||||| |||||||||  ||||||||    
T  27489566 accgagtcaaaattgcccttggaggccaaaactgccacagatgcaaaagttagggggtaattttgtag 27489499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 43028981 - 43029109
Alignment:
Q  24 aaaattagccttg-ggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaa 121  Q
    |||||| |||||| |||||||||| ||| |||  || ||||||||||||| ||||||||||        ||||||||| ||||||||||||||||  |||    
T  43028981 aaaattggccttgtggggccaaaactgctacaattgtaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgcaactttgtgaaa 43029080  T
Q  122 gttatggggtaaaactgctattaagcctt 150  Q
    |||| |||  |||||||||||||| ||||    
T  43029081 gttaagggcaaaaactgctattaaacctt 43029109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 45409063 - 45408981
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 235  Q
    ||||||||||||||||||| |||||||||||||||| |||  |||| ||||| | || ||||||||||||||| || |||||||    
T  45409063 ctaaataccttggaataaaattctcatctttatattccaataaatg-ttattcctaggaataaatttggtaaacttaaaacaaa 45408981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 21737668 - 21737753
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    ||||| |||||||||||| ||| ||| ||||||||| |||||||||| ||| | |  ||||||||||||||| ||||||||||||||    
T  21737668 taaattccttggaataaaattcccatatttatattccaaggaatgtt-attcctaagaataaatttggtaaacttgaaacaaacaca 21737753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 24472625 - 24472683
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttaggggg 72  Q
    |||| ||||||||||| || |||| |||||||| ||||||| |||||||||||||||||    
T  24472625 agacggagtcaaaattggcattggcggccaaaactgccacagatgcaaaacttaggggg 24472683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 19399441 - 19399490
Alignment:
Q  101 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||| ||||||||||||||||| |||| |||||||||||||||||||    
T  19399441 caaaatcacaactttgaaaaagttagggggctaaaactgctattaagcct 19399490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 35718781 - 35718712
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||| ||||||||||| ||||||| |||||||| ||||||| ||||||||  ||||||  ||||||||||    
T  35718781 agactgagtcaaaattggccttggaggccaaaactgccacagatgcaaaatgtaggggacggttttgtag 35718712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 41196491 - 41196540
Alignment:
Q  100 tcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    |||||||| ||||||||||||||||| ||| |||||||||||| ||||||    
T  41196491 tcaaaatcacaactttgaaaaagttaagggttaaaactgctataaagcct 41196540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Complemental strand, 25504 - 25452
Alignment:
Q  31 gccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||| ||||| |||||||  |||||||||||||||| ||||||||||    
T  25504 gccttgggggtcaaaactgccacaggtgcaaaacttagggggcggttttgtag 25452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 148
Target Start/End: Original strand, 15023039 - 15023152
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaa 134  Q
    ||||||||||||||| |||  | |||||||||||||  ||||||||||       ||||||||||||||||| ||||||    ||||||| ||||  |||    
T  15023039 gggggccaaaattgctacagttacaaaacttaggggacggttttgtagtttttttcttagggggtcaaaatcacaacttcttgaaagttagggggccaaa 15023138  T
Q  135 actgctattaagcc 148  Q
    ||||||||||||||    
T  15023139 actgctattaagcc 15023152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 21358361 - 21358421
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaa-ctgctattaagcctt 150  Q
    ||||||||| ||||||| ||||||||| ||||||| |||| |||| |||||||||||||||    
T  21358361 cttagggggccaaaatcacaactttgagaaagttagggggcaaaaactgctattaagcctt 21358421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 24498162 - 24498106
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcc 148  Q
    ||||||||  |||||| ||||||||||||| ||| ||| ||||||||||||||||||    
T  24498162 ttagggggctaaaatcacaactttgaaaaaattaggggctaaaactgctattaagcc 24498106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 39918629 - 39918689
Alignment:
Q  24 aaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||| ||||||||| ||||||||||| |||  |||||||||||||||| ||||||||||    
T  39918629 aaaattggccttggggggccaaaattgctacagttgcaaaacttagggggcggttttgtag 39918689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Complemental strand, 5470453 - 5470394
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||| |||||||||||||||| ||| |||  ||||||||||||||||  |||||||||    
T  5470453 aaaattggccttgggggccaaaactgctacaattgcaaaacttagggggcagttttgtag 5470394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 6510186 - 6510278
Alignment:
Q  23 caaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactt 114  Q
    ||||||||| ||||||| ||||||| ||| |||  |||||||||||||||| ||||||||||       ||||||| | ||||||||||||||    
T  6510186 caaaattagtcttggggggccaaaactgctacagttgcaaaacttagggggcggttttgtagcttttttcttagggtgccaaaatcgcaactt 6510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 239
Target Start/End: Complemental strand, 26310071 - 26309993
Alignment:
Q  161 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||| |||||| ||| ||||||||||||| |||||||| | ||| | || ||||||||||||||| ||||||||||||||    
T  26310071 cttgtaataaaattcccatctttatattccaaggaatgct-attcctaggaataaatttggtaaacttgaaacaaacaca 26309993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 27358221 - 27358303
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaa 235  Q
    |||||||||||| |||||| |||||||||||||||| |||  |||| ||||| | || ||||||||||||||| || |||||||    
T  27358221 ctaaataccttgaaataaaattctcatctttatattccaataaatg-ttattcctaggaataaatttggtaaacttaaaacaaa 27358303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 149
Target Start/End: Complemental strand, 19206267 - 19206141
Alignment:
Q  24 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 122  Q
    |||||| |||||||||| |||||| ||| |||  || ||||||||||||||||||||||||        |||||||| ||||||||||||||||  |||     
T  19206267 aaaattggccttggggggccaaaactgctacagttgtaaaacttagggggtggttttgtagttttttt-ttagggggccaaaatcgcaactttgtgaaaa 19206169  T
Q  123 ttatgggg-taaaactgctattaagcct 149  Q
    ||| ||||  |||| |||||||||||||    
T  19206168 ttagggggcgaaaattgctattaagcct 19206141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 13790106 - 13790018
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    |||| |||||||||| ||||||| ||  ||||| |||||| ||||||||||| ||| | | ||||||||||| |||| ||||||||||||    
T  13790106 ttttttaaataccttagaataaaatttacatctatatatttcaaggaatgtt-attcctacaaataaatttgataaacttgaaacaaaca 13790018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 101 - 149
Target Start/End: Original strand, 36715560 - 36715609
Alignment:
Q  101 caaaatcgcaactttgaaaaagttatgg-ggtaaaactgctattaagcct 149  Q
    ||||||||||||||| ||||||||| || | |||||||||||||||||||    
T  36715560 caaaatcgcaactttaaaaaagttagggagctaaaactgctattaagcct 36715609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 37803258 - 37803190
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||||  | |||||| | |||| ||||||| |||||||||||||| || ||||||||||    
T  37803258 agaccgagtcaaaattgacattggggtc-aaaactgccacaaatgcaaaacttaggaggcggttttgtag 37803190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 4875592 - 4875552
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc 189  Q
    |||||||||||| |||||||||| ||| |||||||||||||    
T  4875592 ttttctaaatacattggaataaaattcacatctttatattc 4875552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 83
Target Start/End: Complemental strand, 4925566 - 4925506
Alignment:
Q  23 caaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||| | ||| |||| ||||| ||||||| ||||||||||||||||  ||||||||||    
T  4925566 caaaattggtcttaggggtcaaaactgccacatatgcaaaacttaggggacggttttgtag 4925506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 14253325 - 14253254
Alignment:
Q  166 aataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    |||||| |||||||| |||||||| || ||||||| ||| | | ||||||||||||||||||| |||||||||    
T  14253325 aataaaattctcatccttatattccaaagaatgtt-attcctaaaaataaatttggtaaatttaaaacaaaca 14253254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 18969354 - 18969410
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaaaactgctattaag 146  Q
    ||||| ||||||||||||||||||||| ||||||| |  ||||||||| ||||||||    
T  18969354 cttagagggtcaaaatcgcaactttgagaaagttaagaaggtaaaactactattaag 18969410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 20650693 - 20650725
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaat 47  Q
    |||||||||||||||||||| ||||||||||||    
T  20650693 gaccgagtcaaaattagcctagggggccaaaat 20650725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 36177109 - 36177045
Alignment:
Q  19 gagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||  ||| || |||||||| ||||| |   ||||||||||||||||||||||||||    
T  36177109 gagtcaaaattgacctaggaggccaaaactgccataggggcaaaacttagggggtggttttgtag 36177045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 7e-24; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 20853493 - 20853377
Alignment:
Q  33 cttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-t 131  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||||||  | ||||||| |||| |    
T  20853493 cttgggggccaaaactgccacatatgcaaaacttagggggtggttttgtagttttttt-ttagggggtcaaaatcgcaacttcaagaaagttagggggct 20853395  T
Q  132 aaaactgctattaagcct 149  Q
    ||||||||||||||||||    
T  20853394 aaaactgctattaagcct 20853377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 37813269 - 37813338
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||    
T  37813269 agaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaacttagggggcggttttgtag 37813338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 30539164 - 30539305
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatc 107  Q
    |||| ||||||| ||||||||  | ||||||||||||| ||||||| ||||||||||||||||  ||||||||||        ||||||||  |||||||    
T  30539164 agcatagaccgaatcaaaattgacattgggggccaaaactgccacagatgcaaaacttaggggacggttttgtagttttttttcttaggggaccaaaatc 30539263  T
Q  108 gcaactttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    |||||||||  ||||||| ||| |||||||||||||||||||    
T  30539264 gcaactttgggaaagttaagggctaaaactgctattaagcct 30539305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 45177337 - 45177201
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    ||||||||||||||||||||||| ||||||||| || |||| ||||||||||||||||  | ||||||||        |||||||| |||||||||||||    
T  45177337 agaccgagtcaaaattagccttgagggccaaaactgtcacagatgcaaaacttaggggacgattttgtagttttttttcttaggggatcaaaatcgcaac 45177238  T
Q  113 tttgaaaaagttatg-gggtaaaactgctattaagcc 148  Q
    ||||| ||||||| | || |||| |||||||||||||    
T  45177237 tttgagaaagttaggaggctaaatctgctattaagcc 45177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 7931051 - 7930964
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||||||||||||||||| || ||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  7931051 ctaaattccttggaataaaattctcatctttatattccaaagaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 7930964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 35818683 - 35818770
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  35818683 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 35818770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 37982042 - 37982133
Alignment:
Q  149 ttttctaaataccttggaataaat-ttctcatctttatattcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||| ||||||||||||||||||  ||||||||||||| ||||||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  37982042 ttttttaaataccttggaataaaaattctcatctttatgttcaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 37982133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 37940046 - 37939917
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| | ||||| | |||||| ||||||| ||||||||||||||||||||||||||||        ||| |||| |||||||||||||    
T  37940046 agaccgagtcaaaattggtcttggtg-ccaaaactgccacatatgcaaaacttagggggtggttttgtagtttttt--ttaaggggccaaaatcgcaact 37939950  T
Q  114 ttgaaaaagttatg-gggtaaaactgctattaa 145  Q
    |||||||| ||| | || |||||||||||||||    
T  37939949 ttgaaaaaattaagaggctaaaactgctattaa 37939917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 10896475 - 10896560
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 238  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||    
T  10896475 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacac 10896560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 146
Target Start/End: Complemental strand, 26823954 - 26823828
Alignment:
Q  22 tcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttgaaaa 120  Q
    |||||||| || |||||| |||||| ||||||| ||||||||||||||||||| ||||||||        |||| ||||||||||||| |||||||| ||    
T  26823954 tcaaaattggcattggggcccaaaactgccacaaatgcaaaacttagggggtgattttgtagttttttttcttaaggggtcaaaatcgtaactttgagaa 26823855  T
Q  121 agtta-tggggtaaaactgctattaag 146  Q
    |||||  ||| ||||||||||||||||    
T  26823854 agttagagggttaaaactgctattaag 26823828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 32071193 - 32071326
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||   ||||| | |||||| || || | ||||||||||||||||| ||||||||||       |||||||| ||||||||||||||    
T  32071193 agaccgagtcaaaattgttcttggagaccaaaactgtcatatatgcaaaacttagggggcggttttgtagtttttt-cttagggg-tcaaaatcgcaact 32071290  T
Q  114 ttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    ||  |||||||| ||| |||||||||||||||||||    
T  32071291 ttagaaaagttaggggctaaaactgctattaagcct 32071326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 39889953 - 39890091
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactt 114  Q
    ||||||||||||||  | |||| |||||||||||||||| ||||||||||||| ||| || |||||||        ||||| |||| |||||||||||||    
T  39889953 accgagtcaaaattgacattggaggccaaaattgccacagatgcaaaacttagagggcggatttgtagttttttttcttagagggtaaaaatcgcaactt 39890052  T
Q  115 tgaaaaagttatgg-ggtaaaactgctattaagcctttt 152  Q
    | |||| |||| || | ||||||||||||||||||||||    
T  39890053 taaaaaggttaaggagctaaaactgctattaagcctttt 39890091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 16313766 - 16313853
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | | ||||||||||| |||| |||||||||||||||    
T  16313766 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaaaaataaatttgataaacttgaaacaaacacac 16313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 18297924 - 18297837
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | ||||||||||||| |||| |||||||||||||||    
T  18297924 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctagaaataaatttgataaacttgaaacaaacacac 18297837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 25837723 - 25837636
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | | |||||||||||||||| |||||||||||||||    
T  25837723 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 25837636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 26061956 - 26061869
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| || ||||||||||||    
T  26061956 ctaaattccttggaataaaattctcatctttatattacaaggaatg-ttattcctaggaataaatttggtaaacttaaaacaaacacac 26061869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 37392805 - 37392892
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  37392805 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 37392892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 38132997 - 38133084
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | |  ||||||||||||||| |||||||||||||||    
T  38132997 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaagaataaatttggtaaacttgaaacaaacacac 38133084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 43872220 - 43872311
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||||| ||  ||||| |||||| ||||||||||| ||| | |||||||||||||| ||| |||||||||||||||    
T  43872220 ttttctaaataccttggaataaaatttacatctatatatttcaaggaatgtt-attcctagaaataaatttggcaaacttgaaacaaacacac 43872311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 148
Target Start/End: Original strand, 6807347 - 6807480
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||| |||||||||||  ||||| ||| ||||| ||||||| ||||||||||||||||||||||||||||        |||| |||||||||| ||||||    
T  6807347 agacagagtcaaaattgaccttgagggacaaaactgccacaaatgcaaaacttagggggtggttttgtagtttttt--ttagagggtcaaaattgcaact 6807444  T
Q  114 ttgaaaaagttatggg-gtaaaactgctattaagcc 148  Q
    |||  ||||||| |||  ||||| ||||||||||||    
T  6807445 ttgggaaagttaggggactaaaattgctattaagcc 6807480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 29044725 - 29044863
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||||||||| |||   |||||||||       |||| |||  |||||||| ||||    
T  29044725 agaccgagtcaaaattggccttgggggccaaaactgccacaaatgcaaaacttatgggacagttttgtaggttttttctta-gggaccaaaatcgtaact 29044823  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcctttt 152  Q
    ||    |||||| |||| ||||||||||||||||||||||    
T  29044824 ttagggaagttagggggctaaaactgctattaagcctttt 29044863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 36688253 - 36688311
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||    
T  36688253 cttagggggtcaaaatcacaactttgaaaaagttagggggttaaaactgctattaagcc 36688311  T

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Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 240
Target Start/End: Complemental strand, 12710449 - 12710370
Alignment:
Q  161 cttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  12710449 cttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 12710370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 15226782 - 15226695
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 236  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||| | ||||| | |  ||||||||||||||| |||||||||||    
T  15226782 ttttctaaataccttgaaataaaattctcatctttatattccaaggaaag-ttattcctaataataaatttggtaaaattgaaacaaac 15226695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 18726879 - 18726966
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| || |||||||||||||| ||  |||||| ||| | |||||||||||||||||| |||||||||||||||    
T  18726879 ctaaattccttggaataaaattttcatctttatattccaattaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 18726966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 26602196 - 26602283
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||| || ||||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  26602196 ctaaattccttggaataaaattcccatctttatgtttcaaggaatgtt-atttctagcaataaatttggtaaacttgaaacaaacacac 26602283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 38363893 - 38363806
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  38363893 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 38363806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 32661194 - 32661280
Alignment:
Q  154 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||| ||||| |||||||||||||||    
T  32661194 taaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttagtaaacttgaaacaaacacac 32661280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 14880476 - 14880414
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 71  Q
    |||| |||||||||||||||  |||||||||||||||| ||||||| |||||||| |||||||    
T  14880476 agcatagaccgagtcaaaatcggccttgggggccaaaactgccacagatgcaaaatttagggg 14880414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 145
Target Start/End: Complemental strand, 25897047 - 25896993
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaa 145  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||    
T  25897047 ttagggggccaaaatcgcaactttgaaaaagttagggggctaaaactgctattaa 25896993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 3676306 - 3676375
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| |  |||||| |||||| ||||||| ||||||||||||| ||| ||||||||||    
T  3676306 agaccgagtcaaaattggttttggggaccaaaactgccacagatgcaaaacttagtgggcggttttgtag 3676375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 5020750 - 5020838
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacaca 241  Q
    ||||||||||| ||||||| || ||||||||||||| ||| ||||| ||||| | | ||||||||||| |||| ||||||||||||||||    
T  5020750 ctaaataccttagaataaaattatcatctttatattccaaagaatg-ttattcctaaaaataaatttgataaacttgaaacaaacacaca 5020838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 23702308 - 23702450
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcg 108  Q
    |||| |||| |||||||||||  |||||| |||||||| || |||| ||||||||||||||||    |||||||        |||||||||  |||||||    
T  23702308 agcatagactgagtcaaaattgaccttggaggccaaaactgtcacaaatgcaaaacttaggggacaattttgtaatttttttcttagggggctaaaatcg 23702407  T
Q  109 caactttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    |||||||   ||||||| |||| ||||||||||||||||||||    
T  23702408 caacttttggaaagttagggggctaaaactgctattaagcctt 23702450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 41487388 - 41487457
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| | ||||||||||||||  || |||  |||||||||||||||| ||||||||||    
T  41487388 agaccgagtcaaaattggtcttgggggccaaaacagctacagttgcaaaacttagggggcggttttgtag 41487457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 3049825 - 3049734
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| |||| ||||||| ||| |||||||||| ||||||||||| ||||| | |  |||||||||| |||| |||||||||||||||    
T  3049825 ttttctaaattccttcgaataaaattcccatctttatatttcaaggaatg-ttattcctatgaataaatttgataaacttgaaacaaacacac 3049734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 6807264 - 6807172
Alignment:
Q  57 tgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    |||||||||||||||||||||| ||||       ||||||||| |||||||||||||| || ||||||||||||  |||||| |||||||||||    
T  6807264 tgcaaaacttagggggtggttt-gtagtttttttcttagggggccaaaatcgcaacttcgagaaagttatggggcaaaaactactattaagcct 6807172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 25144130 - 25144190
Alignment:
Q  24 aaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||| ||||||||| ||||||||||| |||  |||||||||||||||||||||||||||    
T  25144130 aaaattggccttggggggccaaaattgcaacaattgcaaaacttagggggtggttttgtag 25144190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 25899475 - 25899384
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||| ||||||| |||  ||||||||||| ||||||||| ||||| | | ||||||||||| || | |||||||||||||||    
T  25899475 ttttctaaataccttagaataaaattcctatctttatattccaaggaatg-ttattcctaaaaataaatttgttacacttgaaacaaacacac 25899384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 31117781 - 31117872
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||| ||| |||||| |||||||||||||||| ||| ||||| ||||| | | | ||||||||| |||| |||||||||||||||    
T  31117781 ttttctaaatactttgaaataaaattctcatctttatattccaatgaatg-ttattcctaaatataaatttgataaacttgaaacaaacacac 31117872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 83
Target Start/End: Complemental strand, 41602617 - 41602549
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||| || | ||||||||||| |||||||   ||||||||||| ||||||||||||||    
T  41602617 gaccgagtcaaaattggcttagggggccaaaactgccacatgggcaaaacttagcgggtggttttgtag 41602549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 42755679 - 42755592
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||| |||||| |||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  42755679 ctaaattccttggaataaaattcccatcttcatattccaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 42755592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Original strand, 16982795 - 16982857
Alignment:
Q  20 agtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||| ||||||||||| |||| || |||| ||||||||||||||||| ||||||||||    
T  16982795 agtcaaaattggccttgggggc-aaaactggcacagatgcaaaacttagggggcggttttgtag 16982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 200
Target Start/End: Complemental strand, 35394202 - 35394155
Alignment:
Q  154 taaataccttggaataaatttctcatctttata-ttcaaggaatgttt 200  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||    
T  35394202 taaataccttggaataaaattctcatctttatatttcaaggaatgttt 35394155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 45515990 - 45515932
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||| |||||||||||||||||||||| ||| |||| ||||||||| |||||||||    
T  45515990 ttaggggttcaaaatcgcaactttgaaaaaattaaggggctaaaactgcaattaagcct 45515932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 19160996 - 19161087
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccaga-aataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||| || ||||||||||||||||||||||| ||| ||||| ||||| |  || |||||||||| |||| |||||||||||||||    
T  19160996 ttttctaaataccctgaaataaatttctcatctttatattccaaagaatg-ttatt-cttgagaataaatttgataaacttgaaacaaacacac 19161087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 21486790 - 21486721
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||| ||||||||||   ||||| |||||||| |||||||  |||||||||||||||| ||||||||||    
T  21486790 agaccaagtcaaaattgatcttggaggccaaaaatgccacaggtgcaaaacttagggggcggttttgtag 21486721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 114
Target Start/End: Original strand, 27545544 - 27545634
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactt 114  Q
    |||||| |||||||||||||||| ||| |||  || |||||||||||| | |||||||||       ||||||||| ||||||||||||||    
T  27545544 aaaattggccttgggggccaaaactgctacaattgtaaaacttaggggatagttttgtagtttttttcttagggggccaaaatcgcaactt 27545634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 146
Target Start/End: Complemental strand, 29657817 - 29657702
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtag----nnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatgg-gg 130  Q
    ||||||||||| ||||||| |||||||| |||||||| ||||||||||           ||||| ||| ||||||||||||||||| ||||||| || ||    
T  29657817 gggggccaaaactgccacatatgcaaaatttagggggcggttttgtagttttttttcttcttagagggccaaaatcgcaactttgataaagttagggagg 29657718  T
Q  131 taaaactgctattaag 146  Q
    ||||||| ||||||||    
T  29657717 taaaactcctattaag 29657702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 92 - 152
Target Start/End: Complemental strand, 35213088 - 35213027
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagtta-tggggtaaaactgctattaagcctttt 152  Q
    |||||||||||||||||||||||||  ||||||| ||||  ||||| |||||||||||||||    
T  35213088 ttagggggtcaaaatcgcaactttgtcaaagttagtgggcgaaaaccgctattaagcctttt 35213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 16219196 - 16219287
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||||||| ||||||||||||  || ||||||| | ||||| | || |||||||| | |||| || ||||||||||||    
T  16219196 ttttctaaataccttggaataaaattctcatctttaagttccaaggaacg-ttattcctaggaataaattggataaacttaaaacaaacacac 16219287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Complemental strand, 17071020 - 17070903
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggt-aaa 134  Q
    ||||||||||| ||| |||  ||||||||||||||  ||||||||| |        |||||||| |||||||||||||| |  ||||||| ||||  |||    
T  17071020 gggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaa 17070921  T
Q  135 actgctattaagcctttt 152  Q
    ||||||||||||||||||    
T  17070920 actgctattaagcctttt 17070903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 152
Target Start/End: Original strand, 17577252 - 17577369
Alignment:
Q  36 gggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatggggt-aaa 134  Q
    ||||||||||| ||| |||  ||||||||||||||  ||||||||| |        |||||||| |||||||||||||| |  ||||||| ||||  |||    
T  17577252 gggggccaaaactgctacagttgcaaaacttagggaatggttttgttgttttttttttagggggccaaaatcgcaacttcgtgaaagttaaggggcgaaa 17577351  T
Q  135 actgctattaagcctttt 152  Q
    ||||||||||||||||||    
T  17577352 actgctattaagcctttt 17577369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 150
Target Start/End: Original strand, 44269373 - 44269433
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    ||||||||||||||||||||||||||| ||| ||| |||| ||||| | ||||||||||||    
T  44269373 cttagggggtcaaaatcgcaactttgagaaaattagggggttaaaattactattaagcctt 44269433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 28349563 - 28349622
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||||| ||||||||||||||||  ||||||| |||| ||||||| |||||||||||    
T  28349563 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactactattaagcct 28349622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 15181697 - 15181640
Alignment:
Q  91 cttagggggtcaaaatcgcaactttga-aaaagttatgggg-taaaactgctattaagc 147  Q
    ||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  15181697 cttaggggg-caaaatcacaactttgagaaaagttatggggctaaaactgctattaagc 15181640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 27545401 - 27545343
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagtta-tggggtaaaactgctattaagcct 149  Q
    |||||||||| |||||||||||||| ||||||||   || |||||||||||||||||||    
T  27545401 ttagggggtcgaaatcgcaactttggaaaagttagacggctaaaactgctattaagcct 27545343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 33533649 - 33533738
Alignment:
Q  151 ttctaaataccttggaataaatttctcatctttatattcaa-ggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| |||||||||| ||| ||||||||||||||| |||||  | ||| | || ||||||||||  ||| |||||||||||||||    
T  33533649 ttctaaatacattggaataaaattcacatctttatattcaaaggaataat-attcctaggaataaatttgacaaacttgaaacaaacacac 33533738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 12649893 - 12649860
Alignment:
Q  207 agaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||||||||||| |||||||||||||||    
T  12649893 agaaataaatttggtaaacttgaaacaaacacac 12649860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 92 - 149
Target Start/End: Original strand, 34608635 - 34608692
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcct 149  Q
    |||||||| ||||||||||||||| |||||| ||||||  |||| ||| |||||||||    
T  34608635 ttagggggccaaaatcgcaacttttaaaaagatatgggtcaaaagtgcaattaagcct 34608692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 67
Target Start/End: Original strand, 44269301 - 44269350
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaactta 67  Q
    |||||||||||| || ||||||||||||| | ||||| ||||||||||||    
T  44269301 cgagtcaaaattggcattgggggccaaaactaccacaaatgcaaaactta 44269350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 25144076 - 25144024
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttag 68  Q
    |||||||||||||| || ||||  ||||||| ||||||| |||||||||||||    
T  25144076 accgagtcaaaattggctttggatgccaaaactgccacagatgcaaaacttag 25144024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Original strand, 33444877 - 33444917
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc 189  Q
    |||||||||||||||| |||||| || ||||||||||||||    
T  33444877 ttttctaaataccttgaaataaaattttcatctttatattc 33444917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 37263416 - 37263356
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    ||||||| |||||||||||||||| | |||||||| ||||  |||||||||||||| ||||    
T  37263416 cttagggagtcaaaatcgcaacttcgtaaaagttaaggggcgaaaactgctattaaacctt 37263356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 3e-23; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 41243778 - 41243643
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| ||||||||| | |||| ||||||| |||||||||||| |||| ||||||||||       |||||||||  ||||| ||||||    
T  41243778 agaccgagtcaaaattggccttggggacaaaaactgccacaaatgcaaaactta-ggggcggttttgtagtttttttcttagggggctaaaattgcaact 41243680  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||| |||||||| |||| |||||||||||||||||||    
T  41243679 ttggaaaagttagggggctaaaactgctattaagcct 41243643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 36580453 - 36580591
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||  | ||||||||||||| ||||||| ||||||||||||||||| ||||||||||       |||   || ||||||||||||||    
T  36580453 agaccgagtcaaaattgactttgggggccaaaactgccacaaatgcaaaacttagggggcggttttgtagcttttttcttgaaggatcaaaatcgcaact 36580552  T
Q  114 ttgaaaaagtt-atggggtaaaactgctattaagccttt 151  Q
    ||||||||||| | ||| ||||||| ||||||| |||||    
T  36580553 ttgaaaaagttaaagggttaaaactactattaaaccttt 36580591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 28472523 - 28472386
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||| |||||||| | ||||||||| |||| ||||||| | ||||||||||  ||| | ||||||||       |||||||||||||||||||||||    
T  28472523 agaccgaatcaaaattggtcttgggggcgaaaactgccacataagcaaaacttatagggcgattttgtagtttttt-cttagggggtcaaaatcgcaact 28472425  T
Q  114 ttgaaaaagttatggggtaaaactgctattaagcctttt 152  Q
    ||| |||||||| ||| ||||||||||||||||| ||||    
T  28472424 ttggaaaagttaggggctaaaactgctattaagcttttt 28472386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 47909829 - 47909696
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||  |||||   ||||||||||||||| ||||||||||||||||| | ||||||||       |||||||||  ||||||||||||    
T  47909829 agaccgagtcaaaattgaccttgaaagccaaaattgccacagatgcaaaacttagggggcgattttgtagtttttttcttagggggctaaaatcgcaact 47909730  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaag 146  Q
    |||  ||||||| |||| ||||||||||||||||    
T  47909729 ttgggaaagttagggggctaaaactgctattaag 47909696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 15107170 - 15107304
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| || |||| |||||||| ||||||| ||||||||||||||| | ||||||||||        |||||||| |||||||| ||||    
T  15107170 agaccgagtcaaaattggcattggaggccaaaactgccacaaatgcaaaacttagggagcggttttgtagtttttt--ttagggggccaaaatcgtaact 15107267  T
Q  114 ttgaaaaagtta-tggggtaaaactgctattaagcct 149  Q
    ||| |||| |||  |||||||||||||||||||||||    
T  15107268 ttggaaaaattaggggggtaaaactgctattaagcct 15107304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 15029193 - 15029058
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttg 116  Q
    ||||||||||||  ||||||||||||||| |||||||  |||||||||||||||| ||||||||||         |||||||||||||||||||||||||    
T  15029193 cgagtcaaaattgaccttgggggccaaaactgccacatgtgcaaaacttagggggcggttttgtagttttttttattagggggtcaaaatcgcaactttg 15029094  T
Q  117 aaaaagtta----tggggtaaaactgctattaagcc 148  Q
     ||||||||    | || ||||||||||||||||||    
T  15029093 gaaaagttaggggttggttaaaactgctattaagcc 15029058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 9947246 - 9947337
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||| || |||||||||||| ||| |||||||||||| ||||||||||| ||| | |||||||||||||||||| |||||||||||||||    
T  9947246 ttttctacattccttggaataaaattcccatctttatattacaaggaatgtt-attcctagaaataaatttggtaaacttgaaacaaacacac 9947337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 11329805 - 11329718
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||||||||    
T  11329805 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaacacac 11329718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 18504379 - 18504246
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnnctta-gggggtcaaaatcgcaa 111  Q
    |||| ||||||||||| ||||| | |||||||| ||||||| ||||||||||||||||| ||||||||||        |||| ||||| ||||||| |||    
T  18504379 agactgagtcaaaattggccttagaggccaaaactgccacatatgcaaaacttagggggcggttttgtagtattttttcttaggggggccaaaatcacaa 18504280  T
Q  112 ctttgaaaaagttatggggtaaaactgctattaa 145  Q
    |||| ||||||||| ||| |||||||||||||||    
T  18504279 ctttaaaaaagttaggggttaaaactgctattaa 18504246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 37534361 - 37534447
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||||||||| |||||| |||||||||||||||| ||||||||| ||||| | ||||||||||||| |||| ||||||||||||||    
T  37534361 ctaaataccttgaaataaaattctcatctttatattccaaggaatg-ttatttctagaaataaatttgataaacttgaaacaaacaca 37534447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 14 - 145
Target Start/End: Original strand, 18186629 - 18186763
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn--cttagggggtcaaaatcgcaa 111  Q
    |||| ||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||  |||||| |||         |||||||||||||||||| ||    
T  18186629 agactgagtcaaaattggccttggggaccaaaactgccacagatgcaaaacttaagggacggttttatagtttttttttcttagggggtcaaaatcgtaa 18186728  T
Q  112 ctttgaaaaagttatgggg-taaaactgctattaa 145  Q
    ||||| |||||||| |||| |||||||||||||||    
T  18186729 ctttggaaaagttagggggctaaaactgctattaa 18186763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 28350248 - 28350113
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttg 116  Q
    |||||||||||| | |||||||||||||| |||||||   ||||||||||||||| ||||||||||        ||||||||| |||||||| ||||| |    
T  28350248 cgagtcaaaattggtcttgggggccaaaactgccacaggggcaaaacttagggggcggttttgtagttttttttcttagggggccaaaatcgtaacttcg 28350149  T
Q  117 aaaaagttatgggg-taaaactgctattaagccttt 151  Q
      ||||||| |||| |||||||||||||||||||||    
T  28350148 tgaaagttagggggctaaaactgctattaagccttt 28350113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 28904445 - 28904532
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||| ||||||| ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  28904445 ctaaattccttagaataaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 28904532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 35488448 - 35488535
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  35488448 ctaaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 35488535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 83
Target Start/End: Complemental strand, 3381995 - 3381929
Alignment:
Q  16 accgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    ||||||||||||||| |||||||| |||||| ||||||| ||||||||||||||||| ||||||||||    
T  3381995 accgagtcaaaattaaccttgggg-ccaaaactgccacatatgcaaaacttagggggcggttttgtag 3381929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 15348086 - 15347952
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    ||||||||||||||||  |||||||||||| || | ||||| |||||||||||| |||||||||||||||       |||| ||||||||||||||||||    
T  15348086 agaccgagtcaaaattgaccttgggggccataacttccacagatgcaaaactta-ggggtggttttgtag-ttttttctta-ggggtcaaaatcgcaact 15347990  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    ||   ||||||| |||| |||||| |||||||||||||    
T  15347989 ttaggaaagttagggggctaaaacggctattaagcctt 15347952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 27214115 - 27214201
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  27214115 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 27214201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 27248105 - 27248019
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| ||||||||||||||    
T  27248105 ctaaattccttggaataaaattcccatctttatattctaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacaca 27248019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 33378645 - 33378559
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  33378645 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 33378559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 34930727 - 34930813
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  34930727 taaattccttggaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 34930813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 35250254 - 35250118
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| ||||||||| |||||| || || | ||||||||||||| ||| |||||| |||       |||| |||  |||||||||||||    
T  35250254 agaccgagtcaaaattggccttggggtccaaaactgtcaaagatgcaaaacttagagggcggttttatagtttttttcttaagggaccaaaatcgcaact 35250155  T
Q  114 ttgaaaaagtta-tggggtaaaactgctattaagcct 149  Q
    ||| ||||||||  ||| ||||||| |||||||||||    
T  35250154 ttggaaaagttagagggctaaaactactattaagcct 35250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 20185053 - 20184915
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaa 111  Q
    ||||||||||||||||  ||||||||||||||| || |||| |||||||||||| | || ||||||||||         |||||||||  ||||||||||    
T  20185053 agaccgagtcaaaattgaccttgggggccaaaactggcacatatgcaaaacttaagaggcggttttgtagtttttttttcttagggggctaaaatcgcaa 20184954  T
Q  112 ctttgaaaaagttatgg-ggtaaaactgctattaagcct 149  Q
    ||||| |||||||| || | |||||||| ||||||||||    
T  20184953 ctttggaaaagttagggagctaaaactgttattaagcct 20184915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 28785933 - 28786072
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag----nnnnnnncttagggggtcaaaatcgc 109  Q
    ||||||||||||||||||||||||||| ||||| ||||| | |||||||||||| ||||  |||||||||           ||||  ||| ||||||| |    
T  28785933 agaccgagtcaaaattagccttgggggtcaaaactgccataaatgcaaaacttatggggcagttttgtagttttttttcttctta-agggccaaaatcac 28786031  T
Q  110 aactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  28786032 aactttggaaaagttatggggttaaaactgctattaagcct 28786072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 238
Target Start/End: Complemental strand, 44820066 - 44819981
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttata-ttcaaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacac 238  Q
    |||||| |||||||||||| |||||||||||||| || |||||||| ||||| | | |||||||||||||||| |||||||||||||    
T  44820066 ctaaattccttggaataaaattctcatctttatattttaaggaatg-ttattcctaaaaataaatttggtaaacttgaaacaaacac 44819981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 18823974 - 18823890
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    ||||||||||| ||||||| |||||||||||||||| ||| ||||| ||||| | || ||||||||||||||| ||||||||||||    
T  18823974 ctaaataccttagaataaaattctcatctttatattccaaagaatg-ttattcctaggaataaatttggtaaacttgaaacaaaca 18823890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 6656725 - 6656817
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| ||||||||||||||||| ||||||| ||| |||| ||||||||||||||| | |  ||||||||| ||||| |||||| ||||||||    
T  6656725 ttttccaaataccttggaataaaattctcatatttctattccaaggaatgtttattcctaagaataaatttagtaaacttgaaagaaacacac 6656817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 17276414 - 17276505
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||| ||||||||||| ||  ||||| ||||||| |||||||||| ||| | |||||||||||| ||||| |||||||||||||||    
T  17276414 ttttctaaatatcttggaataaaatttacatctatatattccaaggaatgtt-attcctagaaataaattttgtaaaattgaaacaaacacac 17276505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 25924896 - 25924983
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||| |||||   || |||||||||||||||  ||||||||||||||    
T  25924896 ctaaattccttggaataaaattctcatctttatattccaaggaatg-ttattcttaggaataaatttggtaaacatgaaacaaacacac 25924983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Original strand, 27419479 - 27419570
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||||||| | |||||||||| ||| ||||||||||||| ||| |||||| ||| | | |||||||||||||||| |||||||||||||||    
T  27419479 ttttctaaattctttggaataaaattcccatctttatattccaagaaatgtt-attcctaaaaataaatttggtaaacttgaaacaaacacac 27419570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 43949057 - 43948970
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||||||||| |||||||||| ||||    
T  43949057 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttggtaaacttgaaacaaatacac 43948970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 45265307 - 45265394
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || |||||||||| |||| |||||||||||||||    
T  45265307 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttgataaacttgaaacaaacacac 45265394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 48313934 - 48313847
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||| ||||||| ||||||||||||||||| ||| |||||| ||| | ||||||||||||| |||| |||||||||||||||    
T  48313934 ctaaattccttagaataaaattctcatctttatattccaagaaatgtt-attcctagaaataaatttgataaacttgaaacaaacacac 48313847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 30686250 - 30686336
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||||||||| |||||| || ||||||||||||| ||||||||| ||||| | ||||||||||||| |||| || |||||||||||    
T  30686250 ctaaataccttgcaataaaattttcatctttatattccaaggaatg-ttattcctagaaataaatttgataaacttaaaacaaacaca 30686336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 48160833 - 48160919
Alignment:
Q  154 taaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| ||||| | || ||||||||| ||||| |||||||||||||||    
T  48160833 taaattccttggaataaaattcccatctttatattccaaggaatg-ttattcctaggaataaatttagtaaacttgaaacaaacacac 48160919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 14247487 - 14247615
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttga 117  Q
    ||||| |||||| || ||||  ||||||| |||||||  |||||||||||| ||  ||||||||||        ||| |||||| ||||||||||||||     
T  14247487 cgagttaaaattggctttggatgccaaaactgccacatgtgcaaaacttagcggacggttttgtagttttt---ttaaggggtcgaaatcgcaactttgg 14247583  T
Q  118 aaaagttatggggtaaaactgctattaagcct 149  Q
    |||||||| ||| |||||||||||||||||||    
T  14247584 aaaagttaggggataaaactgctattaagcct 14247615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 8074010 - 8073957
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaactta 67  Q
    ||||||| |||||||| |||||||||||||||| ||||||| ||||||||||||    
T  8074010 agaccgaatcaaaattggccttgggggccaaaactgccacatatgcaaaactta 8073957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 71
Target Start/End: Complemental strand, 36903398 - 36903341
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 71  Q
    |||||||||||||||| |||||| ||||||||| ||||||| ||| ||||||||||||    
T  36903398 agaccgagtcaaaattggccttgagggccaaaactgccacagatggaaaacttagggg 36903341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 42256641 - 42256581
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg--taaaactgctattaagcct 149  Q
    |||||||||  |||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  42256641 cttagggggctaaaatcgcaactttgaaaaagttaggggggttaaaactgctattaagcct 42256581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 4049909 - 4050038
Alignment:
Q  24 aaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 122  Q
    |||||| ||||||||| ||||||| ||| |||  |||||| ||||||||| ||||||||||       ||||||||| ||||||| |||||| |  ||||    
T  4049909 aaaattggccttggggggccaaaactgctacagttgcaaaccttagggggcggttttgtagtttttttcttagggggccaaaatcacaacttcgtgaaag 4050008  T
Q  123 ttatgggg-taaaactgctattaagccttt 151  Q
    ||| ||||  ||||||||||||||||||||    
T  4050009 ttaaggggcgaaaactgctattaagccttt 4050038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 44565857 - 44565770
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||||||||||| ||  ||||||||||||| |||||||||| ||| | || |||||||||| |||| |||||||||||||||    
T  44565857 ctaaattccttggaataaaatttccatctttatattccaaggaatgtt-attcctaggaataaatttgataaacttgaaacaaacacac 44565770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 125
Target Start/End: Complemental strand, 17876310 - 17876197
Alignment:
Q  9 agcacagaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcg 108  Q
    |||| ||| |||||||||||| ||||||| ||||||||  |||||| |||||||| ||||||||  ||||||||         ||||||| |||||||||    
T  17876310 agcatagatcgagtcaaaattggccttggaggccaaaaccgccacagatgcaaaatttagggggcagttttgta---atttttttaggggatcaaaatcg 17876214  T
Q  109 caactttgaaaaagtta 125  Q
    |||||||| ||||||||    
T  17876213 caactttggaaaagtta 17876197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 144
Target Start/End: Original strand, 21505796 - 21505927
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaac 112  Q
    |||| ||||||||||  |||||||| ||||||| ||||| | ||||||| | |||||||  |||||||||        ||||||||| ||||||||||||    
T  21505796 agactgagtcaaaatg-gccttgggagccaaaactgccatatatgcaaagcatagggggcagttttgtagttttttttcttagggggccaaaatcgcaac 21505894  T
Q  113 tttgaaaaagttatggg-gtaaaactgctatta 144  Q
    ||||||||||||| |||  ||||||||||||||    
T  21505895 tttgaaaaagttaggggactaaaactgctatta 21505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 239
Target Start/End: Complemental strand, 31598539 - 31598449
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||| ||||||||||| |||||| |||  |||||||||||| ||| |||||| ||| ||| |||||||||||||||| || |||||||||||    
T  31598539 ttttttaaataccttgaaataaaattcctatctttatattccaagaaatgtt-attcccaaaaataaatttggtaaacttaaaacaaacaca 31598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 45045438 - 45045352
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacaca 239  Q
    |||||| |||||||||||| ||| ||||||||||||| ||||||| || ||| | |  ||||||||||||||| ||||||||||||||    
T  45045438 ctaaattccttggaataaaattcccatctttatattccaaggaatatt-attcctaagaataaatttggtaaacttgaaacaaacaca 45045352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 240
Target Start/End: Complemental strand, 48341174 - 48341089
Alignment:
Q  154 taaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||| |||||||||||| ||| | ||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  48341174 taaattccttggaataaaattccc-tctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 48341089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 6792017 - 6792107
Alignment:
Q  57 tgcaaaacttagggggtggttttgtagnnnnnnn-cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaa 145  Q
    |||||||||||||||| ||||||||||        ||||||||  |||||||||||||||| |||||||| |||| |||||||||||||||    
T  6792017 tgcaaaacttagggggcggttttgtagttttttttcttaggggaccaaaatcgcaactttggaaaagttagggggctaaaactgctattaa 6792107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 150
Target Start/End: Original strand, 15348145 - 15348274
Alignment:
Q  24 aaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaaaa 121  Q
    |||||| |||||||||||||||| ||| ||   |||||||||||||||| ||||||||||         ||||| || ||||||||||||||| |  |||    
T  15348145 aaaattggccttgggggccaaaactgctacggttgcaaaacttagggggcggttttgtagtttttttttcttagaggatcaaaatcgcaacttcgtgaaa 15348244  T
Q  122 gttatggggt-aaaactgctattaagcctt 150  Q
    |||| ||||| || ||||||||||||||||    
T  15348245 gttagggggtgaatactgctattaagcctt 15348274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 19644858 - 19644800
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagccttt 151  Q
    ||||||||||||||||||||||||||||||  | |  || |||||||||||||||||||||    
T  19644858 cttagggggtcaaaatcgcaactttgaaaagttga--ggctaaaactgctattaagccttt 19644800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 39553994 - 39553910
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    |||||| |||||||||||| ||| |||||||||||| ||||||||| ||||||| |  |||||||||| |||| || |||||||||    
T  39553994 ctaaattccttggaataaaattcccatctttatattccaaggaatg-ttattactaagaataaatttgataaacttcaaacaaaca 39553910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 5172711 - 5172815
Alignment:
Q  24 aaaattagccttggggg-ccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaactttgaaaa 120  Q
    |||||| |||||||||| |||||| ||| |||  |||||||||||||||| ||||||||||         |||||||||||||||||||||||| | |||    
T  5172711 aaaattggccttgggggaccaaaactgctacagttgcaaaacttagggggcggttttgtagttttttttccttagggggtcaaaatcgcaacttcgtaaa 5172810  T
Q  121 agtta 125  Q
    |||||    
T  5172811 agtta 5172815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 6726438 - 6726501
Alignment:
Q  19 gagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||  |||||||||| |||| |||||||  |||||||||||||||||| ||||||||    
T  6726438 gagtcaaaattgtccttgggggc-aaaactgccacatgtgcaaaacttagggggtgattttgtag 6726501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 83
Target Start/End: Original strand, 9500080 - 9500148
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||| |||||||||| |||||||||||||||| | |||||    |||||||||||||| ||||||||||    
T  9500080 gaccaagtcaaaattggccttgggggccaaaactaccacaaggtcaaaacttagggggcggttttgtag 9500148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 14247408 - 14247291
Alignment:
Q  35 tgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaagttatg-gggtaa 133  Q
    |||||||||||| |||||||  ||||||||||| |||| ||||||||||       |||||| || ||||||| |||||| |  ||||||| | ||  ||    
T  14247408 tgggggccaaaactgccacaattgcaaaacttatggggcggttttgtagtttttttcttaggcggccaaaatcacaacttcgtgaaagttaggtggcgaa 14247309  T
Q  134 aactgctattaagccttt 151  Q
    ||||||||||||||||||    
T  14247308 aactgctattaagccttt 14247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 20185104 - 20185232
Alignment:
Q  24 aaaattagccttgggg-gccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaactttgaaaaag 122  Q
    |||||||||||||||| ||||||| ||| |||  ||||||||||||| || ||||||||||        ||||||||||||||||||||||| |  ||||    
T  20185104 aaaattagccttggggggccaaaactgctacagttgcaaaacttaggaggcggttttgtagttttttt-ttagggggtcaaaatcgcaacttcgtgaaag 20185202  T
Q  123 ttatgggg-taaaactgctattaagccttt 151  Q
    ||| ||||  |||||| ||||||| |||||    
T  20185203 ttagggggcgaaaactactattaatccttt 20185232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 22156433 - 22156520
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 236  Q
    ||||||| ||||||| ||||||| |||| |||||||||||| ||  |||||| ||| | | ||||||||||| ||||||||||||||||    
T  22156433 ttttctatataccttagaataaaattcttatctttatattccaaaaaatgtt-attcctaaaaataaatttgataaatttgaaacaaac 22156520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 22212348 - 22212435
Alignment:
Q  149 ttttctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 236  Q
    ||||||| ||||||| ||||||| |||| |||||||||||| ||  |||||| ||| | | ||||||||||| ||||||||||||||||    
T  22212348 ttttctatataccttagaataaaattcttatctttatattccaaaaaatgtt-attcctaaaaataaatttgataaatttgaaacaaac 22212435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 152
Target Start/End: Original strand, 35250374 - 35250434
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcctttt 152  Q
    |||||||||||||||||||||||||  ||||||| |||  ||||| |||||||| ||||||    
T  35250374 ttagggggtcaaaatcgcaactttgtcaaagttaggggcaaaaaccgctattaaacctttt 35250434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 36903533 - 36903581
Alignment:
Q  101 caaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcc 148  Q
    |||||||||||| |||||||||||| |||| ||||||||||||||||||    
T  36903533 caaaatcgcaacattgaaaaagttagggggttaaaactgctattaagcc 36903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 45448742 - 45448667
Alignment:
Q  165 gaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||| ||| ||||||||||||| |||||||||| |||   || ||||||||||||||| |||||||||||||||    
T  45448742 gaataaaattcccatctttatattccaaggaatgtt-attcataggaataaatttggtaaacttgaaacaaacacac 45448667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 148
Target Start/End: Original strand, 12905792 - 12905839
Alignment:
Q  101 caaaatcgcaactttgaaaaagttatggggtaaaactgctattaagcc 148  Q
    ||||||||||||||||||||||||| |||  |||||| ||||||||||    
T  12905792 caaaatcgcaactttgaaaaagttaggggccaaaactactattaagcc 12905839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 20505156 - 20505101
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaa 145  Q
    ||||||||| |||| |||||||||||| ||||||| |||| |||||||||||||||    
T  20505156 cttagggggccaaagtcgcaactttgagaaagttagggggctaaaactgctattaa 20505101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 28350323 - 28350421
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||| ||||||||||| ||||||||| |||||| |||||||  ||||||||||| |||| ||||||||||       ||||||||| |||| ||||||||    
T  28350323 agacagagtcaaaattggccttgggg-ccaaaactgccacaggtgcaaaactta-ggggcggttttgtagtttttttcttagggggccaaagtcgcaact 28350420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 29834330 - 29834397
Alignment:
Q  15 gaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    ||||||||| |||||  |||||||||  ||||||| ||||  |||||||||||||||| |||||||||    
T  29834330 gaccgagtctaaattgaccttgggggagaaaattgtcacaggtgcaaaacttagggggcggttttgta 29834397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 238
Target Start/End: Complemental strand, 38543998 - 38543920
Alignment:
Q  161 cttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaa-tttgaaacaaacac 238  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||| | |  ||||||||| ||||| ||||||||||||||    
T  38543998 cttggaataaaattctcatctttatattccaaggaatg-ttattcctaagaataaatttagtaaactttgaaacaaacac 38543920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 3318375 - 3318317
Alignment:
Q  92 ttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    |||||||  |||||||||||||||| |||||||| |||| ||||||| |||||||||||    
T  3318375 ttaggggaccaaaatcgcaactttggaaaagttaaggggctaaaactcctattaagcct 3318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 11374146 - 11374214
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||| ||||||||| ||||||| | |||||| |  |||| |||||||||||||||||| |||||||||    
T  11374146 agaccgggtcaaaattggccttggcg-ccaaaactagcacaaatgcaaaacttagggggtagttttgtag 11374214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 25097881 - 25097796
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaaca 237  Q
    |||||| |||||||||||| |||||||||||||||| |||  ||   ||||| | || ||||||||||||||| || |||||||||    
T  25097881 ctaaattccttggaataaaattctcatctttatattccaaaaaaatattattcctaggaataaatttggtaaacttaaaacaaaca 25097796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 1450320 - 1450388
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    ||||| |||||||||| |||||||||||||||| ||||| | || ||| || |||||||  ||||||||    
T  1450320 agaccaagtcaaaattggccttgggggccaaaactgccaaagatccaatacatagggggctgttttgta 1450388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 40212701 - 40212665
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc 189  Q
    |||||| |||||||||||| |||||||||||||||||    
T  40212701 ctaaattccttggaataaaattctcatctttatattc 40212665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 539 - 405
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag--nnnnnnncttagggggtcaaaatcgcaa 111  Q
    |||||||||||||||| | |||||||||||||| ||||||| ||| ||||||||||||||||||||||||         ||||||||| |||||||||||    
T  539 agaccgagtcaaaattggtcttgggggccaaaactgccacatatgtaaaacttagggggtggttttgtagtttttttttcttagggggccaaaatcgcaa 440  T
Q  112 ctttgaaaaagttatgggg-taaaactgctattaa 145  Q
    ||||||  |||||| |||| |||| ||||||||||    
T  439 ctttgaggaagttagggggctaaagctgctattaa 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 145
Target Start/End: Complemental strand, 9547 - 9415
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||  ||||||||||       ||||| |||  |||||| |||||    
T  9547 agaccgagtcaaaattggccttgggggctaaaactgccacatatgcaaaacttaggggacggttttgtagtttttttcttagagggcaaaaatcacaact 9448  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaa 145  Q
    |||  ||| ||| |||| |||||||||||||||    
T  9447 ttgggaaaattagggggctaaaactgctattaa 9415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 145489 - 145377
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaac 112  Q
    |||||||||||||||| |||||||||||||||| ||||||| |||||||| ||| |||| || |||||||        ||||||||| ||||||||||||    
T  145489 agaccgagtcaaaattggccttgggggccaaaactgccacagatgcaaaatttaaggggcggctttgtagttttttttcttaggggggcaaaatcgcaac 145390  T
Q  113 tttgaaaaagtta 125  Q
    ||||| |||||||    
T  145389 tttgagaaagtta 145377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 19207 - 19276
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||| ||||||| |||||||||||||||| | |||||  |||||||||||||||| ||||||||||    
T  19207 agaccgagccaaaattggccttgggggccaaaactaccacatgtgcaaaacttagggggcggttttgtag 19276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 19600 - 19652
Alignment:
Q  94 agggggtcaaaatcgcaactttgaaaaagttatggg-gtaaaactgctattaa 145  Q
    |||||| ||||||||||||||||||||||||| |||  |||||||||||||||    
T  19600 agggggccaaaatcgcaactttgaaaaagttaggggactaaaactgctattaa 19652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 76997 - 76929
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag 83  Q
    |||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||| || |||||||    
T  76997 agaccgagtcaaaattggccttgggggc-aaaactgccacaaatgcaaaacttagggggcggctttgtag 76929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 201738 - 201651
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    |||||| |||| ||||||| ||| ||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||||||    
T  201738 ctaaattccttagaataaaattcccatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaacacac 201651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 143430 - 143342
Alignment:
Q  149 ttttctaaataccttggaataaat-ttctcatctttatattc-aaggaatgtttattaccagaaataaatttggtaaatttgaaacaaac 236  Q
    ||||| |||||||||| ||||||  ||||||||||||||||| |||||||||| ||| | || ||||||||||||||| |||||||||||    
T  143430 ttttccaaataccttgaaataaaaattctcatctttatattccaaggaatgtt-attcctaggaataaatttggtaaacttgaaacaaac 143342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 3211 - 3157
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttag 68  Q
    ||||||||||||||||  ||||| ||||||||||||||||| |||||||||||||    
T  3211 agaccgagtcaaaattgaccttgagggccaaaattgccacaaatgcaaaacttag 3157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 3697 - 3638
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 3697 - 3638
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||||| ||||||||||||||||  ||||||| |||| |||||||||||||||||||    
T  3697 cttagggggccaaaatcgcaactttgggaaagttagggggctaaaactgctattaagcct 3638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 20045 - 19910
Alignment:
Q  18 cgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtag-nnnnnnncttagggggtcaaaatcgcaactttg 116  Q
    |||||||||||| || ||||||||||||| ||||||| ||||||||||||| ||  | ||||||||        |||| |||| ||||||| |||||||     
T  20045 cgagtcaaaattggctttgggggccaaaactgccacagatgcaaaacttagtggacgattttgtagttttttttctta-ggggccaaaatcacaacttta 19947  T
Q  117 aaaaagttatgggg-taaaactgctattaagcctttt 152  Q
    ||||| ||| |||| ||||||||||||||||| ||||    
T  19946 aaaaatttagggggttaaaactgctattaagcttttt 19910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 3824 - 3911
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||| |||||   || ||||||||||||  | |||||||||||||||    
T  3824 ctaaataccttggaataaaattcctatctttatattccaaggaatg-ttattcataggaataaatttggtgcacttgaaacaaacacac 3911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 240
Target Start/End: Complemental strand, 4278 - 4191
Alignment:
Q  153 ctaaataccttggaataaatttctcatctttatatt-caaggaatgtttattaccagaaataaatttggtaaatttgaaacaaacacac 240  Q
    ||||||||||||||||||| |||  ||||||||||| ||||||||| |||||   || ||||||||||||  | |||||||||||||||    
T  4278 ctaaataccttggaataaaattcctatctttatattccaaggaatg-ttattcataggaataaatttggtgcacttgaaacaaacacac 4191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 258 - 122
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgtagnnnnnnncttagggggtcaaaatcgcaact 113  Q
    |||||||||||||||| |||||| || |||||| |||||||  ||||||| ||||| |  | ||||||||       || |||| |  ||||||||||||    
T  258 agaccgagtcaaaattcgccttgtgg-ccaaaactgccacaagtgcaaaatttaggagacgtttttgtagtttttatctcagggagcaaaaatcgcaact 160  T
Q  114 ttgaaaaagttatgggg-taaaactgctattaagcctt 150  Q
    |||| ||||||| | || ||||||||||||||||||||    
T  159 ttgagaaagttaggaggctaaaactgctattaagcctt 122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 46253 - 46321
Alignment:
Q  14 agaccgagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggggtggttttgta 82  Q
    |||| |||||||||||  ||||||||||||||| || |||| ||||||||||||| |||  ||||||||    
T  46253 agactgagtcaaaattgaccttgggggccaaaactgtcacagatgcaaaacttagagggcagttttgta 46321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1458 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1458
Description:

Target: scaffold1458; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 1529 - 1470
Alignment:
Q  91 cttagggggtcaaaatcgcaactttgaaaaagttatgggg-taaaactgctattaagcct 149  Q
    ||||||||| ||||||| ||||||||  ||||||| |||| |||||||||||||||||||    
T  1529 cttagggggccaaaatctcaactttgtgaaagttagggggctaaaactgctattaagcct 1470  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 71
Target Start/End: Original strand, 203359 - 203411
Alignment:
Q  19 gagtcaaaattagccttgggggccaaaattgccacacatgcaaaacttagggg 71  Q
    |||||||||||  | ||||||||||||| || |||| ||||||||||||||||    
T  203359 gagtcaaaattgactttgggggccaaaactgtcacaaatgcaaaacttagggg 203411  T

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