View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19195_low_12 (Length: 281)
Name: NF19195_low_12
Description: NF19195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19195_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 269
Target Start/End: Complemental strand, 7830281 - 7830017
Alignment:
| Q |
1 |
ttaagacggacctacccacccagatatgtaagttaataaagtgcttacaaaagaagatatacgtctgtatttgttcttcttattatagaatcagaacaaa |
100 |
Q |
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| T |
7830281 |
ttaagacggaccta----cccagatatgtaagttaataaagtgcttacaaaagaagatatacgtctgtatttgttcttcttattatagaatcagaacaaa |
7830186 |
T |
|
| Q |
101 |
tttcttacaccaactagaatgcaataatagatatccttattaggcataatccagagtggaaagcttgatattgtaatgatactaagatatctctannnnn |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||||||| |
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| T |
7830185 |
tttcttacaccaactagaatgcaataatagatatccttattagccataatcctgagtggaaagcttgatattctaatgatactaagatatctctattttt |
7830086 |
T |
|
| Q |
201 |
nnacaatcacctaaactcaaacacgtctcttctcattagcctcaagtgcataatgattgccacatacct |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7830085 |
ttacaatcacctaaactcaaacacgtctcttctcattagcctcaagtgcataatgattgccacatacct |
7830017 |
T |
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