View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19195_low_18 (Length: 249)

Name: NF19195_low_18
Description: NF19195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19195_low_18
NF19195_low_18
[»] chr4 (3 HSPs)
chr4 (1-243)||(55244493-55244750)
chr4 (35-100)||(22683923-22683988)
chr4 (13-102)||(55927709-55927798)
[»] chr6 (7 HSPs)
chr6 (33-100)||(34620945-34621012)
chr6 (33-100)||(34748382-34748449)
chr6 (33-104)||(882741-882812)
chr6 (33-100)||(32888916-32888983)
chr6 (28-73)||(28466938-28466983)
chr6 (13-102)||(31305786-31305875)
chr6 (28-73)||(34736750-34736795)
[»] chr1 (4 HSPs)
chr1 (33-98)||(48548973-48549038)
chr1 (58-101)||(1514401-1514444)
chr1 (36-101)||(28464957-28465022)
chr1 (13-101)||(7524171-7524259)
[»] scaffold0361 (1 HSPs)
scaffold0361 (33-102)||(14073-14142)
[»] chr3 (2 HSPs)
chr3 (2-99)||(37334962-37335059)
chr3 (37-102)||(46853497-46853562)
[»] chr8 (6 HSPs)
chr8 (2-101)||(32927950-32928049)
chr8 (38-95)||(42458295-42458352)
chr8 (33-100)||(4950542-4950609)
chr8 (35-101)||(16972025-16972091)
chr8 (16-102)||(36447690-36447776)
chr8 (45-90)||(43492208-43492253)
[»] chr5 (5 HSPs)
chr5 (35-102)||(117457-117524)
chr5 (33-100)||(4306571-4306638)
chr5 (28-102)||(35138977-35139051)
chr5 (35-100)||(10372957-10373022)
chr5 (43-95)||(42858322-42858374)
[»] chr2 (6 HSPs)
chr2 (16-102)||(40401585-40401671)
chr2 (35-101)||(16518836-16518902)
chr2 (33-99)||(42973219-42973285)
chr2 (33-102)||(1976823-1976892)
chr2 (60-104)||(7297066-7297110)
chr2 (35-99)||(15220822-15220886)
[»] chr7 (3 HSPs)
chr7 (33-102)||(40561717-40561786)
chr7 (35-102)||(27571919-27571986)
chr7 (35-102)||(45005077-45005144)


Alignment Details
Target: chr4 (Bit Score: 180; Significance: 3e-97; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 55244750 - 55244493
Alignment:
Q  1 aaattgatcatctaaaattggttccaactaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 100  Q
    ||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55244750 aaattgatcatctaaaattggttccgactaacattgagttgaagataaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 55244651  T
Q  101 gaatattcaagttaattgtataataaataccatcaaatatattcctaaaggcaaaatcgacaatagaacatgt---------------catagccaagtg 185  Q
     | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||               ||||||||||||    
T  55244650 aagtattcaagttaattgtataataaataccatcaaatatattcctaaaggcaaaatcgacaatacaacatgtcataatcaaacatgtcatagccaagtg 55244551  T
Q  186 tatgtttgaactatacttggtttgttaaactcaaaacttttgtccaaatttcatctca 243  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55244550 tatgtttgaactatacttggttttttaaactcaaaacttttgtccaaatttcatctca 55244493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 22683988 - 22683923
Alignment:
Q  35 tgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 100  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||||   ||||||| |||||||||    
T  22683988 tgagttgaaagtaaaatggtttatgtttggacacatttatgtaaaagcgagttgaacaataaattt 22683923  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 55927709 - 55927798
Alignment:
Q  13 taaaattggttccaactaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    |||||||| |||||  ||| ||||||||| || |||  || || ||||||||||||||| |||||||| | | ||||| |||||||||||    
T  55927709 taaaattgattccagttaaaattgagttggagttaatgtgatttatgtttggatacattcatgtaaaagtgacttgaacaataaatttga 55927798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 4e-16; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 34621012 - 34620945
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 100  Q
    ||||||||||||||||| || || |||||||||||||||||||||||| | ||||||| |||||||||    
T  34621012 attgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattt 34620945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 34748449 - 34748382
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 100  Q
    ||||||||||||||||| || || |||||||||||||||||||||||| | ||||||| |||||||||    
T  34748449 attgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattt 34748382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 104
Target Start/End: Complemental strand, 882812 - 882741
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttgaat 104  Q
    |||||||||||||||||||| || ||||||||||||||| ||| |||| | |||| || |||||||||||||    
T  882812 attgagttgaaggtaaaatgatttatgtttggatacattcatgcaaaagtgagttaaacaataaatttgaat 882741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Original strand, 32888916 - 32888983
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 100  Q
    |||||||||||| ||||||| || ||||||| ||| |||||||||||| | ||||||| |||||||||    
T  32888916 attgagttgaagataaaatgatttatgtttgaatatatttatgtaaaagtgagttgaacaataaattt 32888983  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 28466938 - 28466983
Alignment:
Q  28 ctaatattgagttgaaggtaaaatggttaatgtttggatacattta 73  Q
    |||| ||||||||||||||| | ||||| |||||||||||||||||    
T  28466938 ctaaaattgagttgaaggtatagtggtttatgtttggatacattta 28466983  T

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Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 31305786 - 31305875
Alignment:
Q  13 taaaattggttccaactaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    |||||||| |||| ||||| |  | ||||||||||||||  || ||||||||||| ||| |||||||| | ||||||  |||||||||||    
T  31305786 taaaattgattccgactaaaagggtgttgaaggtaaaatcatttatgtttggatatattaatgtaaaagtgagttgatcaataaatttga 31305875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 34736795 - 34736750
Alignment:
Q  28 ctaatattgagttgaaggtaaaatggttaatgtttggatacattta 73  Q
    |||| ||||||||||||||| | ||||| |||||||||||||||||    
T  34736795 ctaaaattgagttgaaggtatagtggtttatgtttggatacattta 34736750  T

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Target: chr1 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 48548973 - 48549038
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaat 98  Q
    |||||||||||||||||||| || |||||| ||||||||||||||||| | ||||||| |||||||    
T  48548973 attgagttgaaggtaaaatgatttatgttttgatacatttatgtaaaagtgagttgaacaataaat 48549038  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 101
Target Start/End: Complemental strand, 1514444 - 1514401
Alignment:
Q  58 tgtttggatacatttatgtaaaaataagttgaagaataaatttg 101  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||    
T  1514444 tgtttggatacattcatgtaaaaatgagttgaacaataaatttg 1514401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 28464957 - 28465022
Alignment:
Q  36 gagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttg 101  Q
    |||||||| |||| ||| || |||||||  |||||||||||||||||  |||||| ||||||||||    
T  28464957 gagttgaatgtaacatgatttatgtttgtgtacatttatgtaaaaatgggttgaacaataaatttg 28465022  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 101
Target Start/End: Complemental strand, 7524259 - 7524171
Alignment:
Q  13 taaaattggttccaactaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttg 101  Q
    |||||||| ||| |||||| | |||| | |||||||| || ||  |||||||| |||||||||||||| | |||||||  |||||||||    
T  7524259 taaaattgattctaactaaaagtgagctcaaggtaaagtgatttgtgtttggacacatttatgtaaaagtgagttgaactataaatttg 7524171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 14073 - 14142
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    ||||||||||||||||| || || ||||||||||||||| |||| ||| | ||||||| |||||||||||    
T  14073 attgagttgaaggtaaagtgatttatgtttggatacattcatgtgaaagtgagttgaaaaataaatttga 14142  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Original strand, 37334962 - 37335059
Alignment:
Q  2 aattgatcatctaaaattggttccaactaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatt 99  Q
    ||||||| || |||||||| |||| ||||| ||||||||||||||||| || || |||| || ||||||| || ||||||| ||||||| ||| ||||    
T  37334962 aattgattatataaaattgattccgactaaaattgagttgaaggtaaagtgatttatgtctgaatacattcatataaaaatgagttgaacaatgaatt 37335059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 102
Target Start/End: Original strand, 46853497 - 46853562
Alignment:
Q  37 agttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    ||||||||||||| || || ||||  ||||| |||||||||||| | ||||||| |||||||||||    
T  46853497 agttgaaggtaaagtgatttatgtcaggatatatttatgtaaaagtgagttgaacaataaatttga 46853562  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 101
Target Start/End: Complemental strand, 32928049 - 32927950
Alignment:
Q  2 aattgatcatctaaaattggttccaactaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttg 101  Q
    ||||||| || |||||||| |||  ||||| ||||||||||||| ||| || ||  |||||||||||||| |||||||| | |||||||  |||||||||    
T  32928049 aattgattatgtaaaattgattcttactaaaattgagttgaaggcaaagtgatttgtgtttggatacattcatgtaaaagtgagttgaactataaatttg 32927950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 42458295 - 42458352
Alignment:
Q  38 gttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaata 95  Q
    |||||||||||||| ||| ||||| ||||||||| |||||||||| ||||||| ||||    
T  42458295 gttgaaggtaaaatagtttatgttcggatacattcatgtaaaaatgagttgaacaata 42458352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 4950609 - 4950542
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 100  Q
    ||||||||||||||||| || || ||||||||||| |||||||  ||| | ||||||| |||||||||    
T  4950609 attgagttgaaggtaaagtgatttatgtttggatatatttatgagaaagtgagttgaaaaataaattt 4950542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 16972025 - 16972091
Alignment:
Q  35 tgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttg 101  Q
    |||||||||||||||||| ||  |||||| ||||||| |||||||| | | ||||| ||||||||||    
T  16972025 tgagttgaaggtaaaatgatttgtgtttgaatacattcatgtaaaagtgatttgaacaataaatttg 16972091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 36447690 - 36447776
Alignment:
Q  16 aattggttccaactaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    ||||| |||| ||||| | |||||||||  ||||||| ||  ||||| |||||||||||||| || | ||||||| |||||||||||    
T  36447690 aattgattccgactaaaagtgagttgaatataaaatgatttgtgtttagatacatttatgtataactgagttgaataataaatttga 36447776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 43492208 - 43492253
Alignment:
Q  45 gtaaaatggttaatgtttggatacatttatgtaaaaataagttgaa 90  Q
    |||||||| || ||||||||||||||| |||||||| |||||||||    
T  43492208 gtaaaatgatttatgtttggatacattcatgtaaaagtaagttgaa 43492253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 117457 - 117524
Alignment:
Q  35 tgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    |||||||||||||||||| || |||||||||||||| ||||||||| | |||| || |||| ||||||    
T  117457 tgagttgaaggtaaaatgattcatgtttggatacatctatgtaaaagtgagttaaacaatacatttga 117524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 100
Target Start/End: Complemental strand, 4306638 - 4306571
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 100  Q
    ||||||||||| |||||||| || ||||||||||||||| |||||||||  | ||||| |||||||||    
T  4306638 attgagttgaatgtaaaatgatttatgtttggatacattcatgtaaaaaagaattgaacaataaattt 4306571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 35138977 - 35139051
Alignment:
Q  28 ctaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    |||| |||||||||||||||||||| || |||||  |||||||| || | ||| | ||||||| |||||||||||    
T  35138977 ctaaaattgagttgaaggtaaaatgatttatgttcagatacattcatatgaaagtgagttgaacaataaatttga 35139051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 10373022 - 10372957
Alignment:
Q  35 tgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaattt 100  Q
    ||||||||| ||||| ||||| |||||||||||||||||    ||| ||||||||| |||||||||    
T  10373022 tgagttgaatgtaaactggtttatgtttggatacatttacacgaaagtaagttgaacaataaattt 10372957  T

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Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 42858322 - 42858374
Alignment:
Q  43 aggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaata 95  Q
    ||||||| ||||| || |||||||||||| |||||||| ||||||||| ||||    
T  42858322 aggtaaagtggtttatatttggatacattaatgtaaaagtaagttgaacaata 42858374  T

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Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 102
Target Start/End: Original strand, 40401585 - 40401671
Alignment:
Q  16 aattggttccaactaatattgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    |||||||||| ||||| | ||||||||||||| | |  || ||||||||||||||| |||||||| | ||||||| |||||| ||||    
T  40401585 aattggttcctactaaaaatgagttgaaggtagactaatttatgtttggatacattcatgtaaaagtcagttgaacaataaacttga 40401671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Complemental strand, 16518902 - 16518836
Alignment:
Q  35 tgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttg 101  Q
    |||||||| ||||||||| ||  |||||||||||||| |||||||| | |||||||  |||||||||    
T  16518902 tgagttgagggtaaaatgatttgtgtttggatacattcatgtaaaagtgagttgaactataaatttg 16518836  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 42973285 - 42973219
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatt 99  Q
    |||||||| || || |||||||| |||||   |||||||||||||||||| ||||||| ||||||||    
T  42973285 attgagtttaatgtgaaatggtttatgttaatatacatttatgtaaaaatgagttgaataataaatt 42973219  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 1976823 - 1976892
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    |||||||||||||||||  |  | ||||||||||||||| |||||||| | |||| || |||||||||||    
T  1976823 attgagttgaaggtaaagcgacttatgtttggatacattcatgtaaaagtgagttcaacaataaatttga 1976892  T

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Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 104
Target Start/End: Complemental strand, 7297110 - 7297066
Alignment:
Q  60 tttggatacatttatgtaaaaataagttgaagaataaatttgaat 104  Q
    |||| |||||| ||||||||| ||||||||| |||||||||||||    
T  7297110 tttgaatacatatatgtaaaagtaagttgaacaataaatttgaat 7297066  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 99
Target Start/End: Original strand, 15220822 - 15220886
Alignment:
Q  35 tgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatt 99  Q
    ||||||||| ||||| || || ||||||||||||||| |||| ||| | ||||||| ||||||||    
T  15220822 tgagttgaatgtaaagtgatttatgtttggatacattcatgttaaagtgagttgaacaataaatt 15220886  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 102
Target Start/End: Original strand, 40561717 - 40561786
Alignment:
Q  33 attgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    ||||||||||| ||||| || || ||||||||||||||| |||||||| | ||||||| |||| ||||||    
T  40561717 attgagttgaaagtaaagtgatttatgtttggatacattcatgtaaaagtgagttgaacaatatatttga 40561786  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 27571986 - 27571919
Alignment:
Q  35 tgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    |||||| ||||||||||| || ||| |||||||||||||||||||  | ||||||| |||||| ||||    
T  27571986 tgagttaaaggtaaaatgatttatggttggatacatttatgtaaatgtgagttgaataataaacttga 27571919  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 102
Target Start/End: Complemental strand, 45005144 - 45005077
Alignment:
Q  35 tgagttgaaggtaaaatggttaatgtttggatacatttatgtaaaaataagttgaagaataaatttga 102  Q
    |||||||||||||||  | || |||||| |||| |||||||||||| | ||||||| |||||||||||    
T  45005144 tgagttgaaggtaaaccgattgatgttttgatatatttatgtaaaagtgagttgaataataaatttga 45005077  T

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